NO27G00150.1, NO27G00150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO27G00150.1
Unique NameNO27G00150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length396
Alignment locationchr27:44927..45823 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:44927..45823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G00150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G00150NO27G00150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO27G00150.1NO27G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO27G00150.1.cds1NO27G00150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G00150.1.cds2NO27G00150.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G00150.1.cds3NO27G00150.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G00150.1.cds4NO27G00150.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO27G00150.1 ID=NO27G00150.1|Name=NO27G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=396bp
ATGGACACAGTCGCCGAGCCCGAGGAGGAGGAGGATGAGGAAGGGCACGA
GGAGACCCGGGCGATACAGGCACGGCTATCTAAGTACCTCGAGGAGGAGG
AAGATCAGACGCTCGCAGCCTTCCTCAAGACAGGAGGGAGGGAAGGAGGT
GGAGGAGGAAAGGGGGGGGGATGCAGGGAGAGCTCCCGCCTGGATACGAA
GGTGAGGCCTACGAGGAATCTTCCCATGACGCCTTCCTCTCGTTCCTCAA
GCGAGTCTCGCGATGCCCCGGTCAACTACTGCGTTACGCCTATGGAGGCA
ACCCCCTCTGGTCGACAAGCCTCCCTCCCTCCCTCCCTCCCTCCCTCACA
TCGTGCCTGGCATGCGGGGCCGCGCGCCGTTTCGAGCTGCAGCTGA
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protein sequence of NO27G00150.1

>NO27G00150.1-protein ID=NO27G00150.1-protein|Name=NO27G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=132bp
MDTVAEPEEEEDEEGHEETRAIQARLSKYLEEEEDQTLAAFLKTGGREGG
GGGKGGGCRESSRLDTKVRPTRNLPMTPSSRSSSESRDAPVNYCVTPMEA
TPSGRQASLPPSLPPSHRAWHAGPRAVSSCS*
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mRNA from alignment at chr27:44927..45823+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO27G00150.1 ID=NO27G00150.1|Name=NO27G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=897bp|location=Sequence derived from alignment at chr27:44927..45823+ (Nannochloropsis oceanica)
ATGGACACAGTCGCCGAGCCCGAGGAGGAGGAGGATGAGGAAGGGCACGA
GGAGGCAAGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGAAGGGTGTTACG
ATGGCCAGAGAAGATTTAGCTAGTCTCTAACCATCTCTTCCTTCCTCCCT
TCCTTTCTCCCTCCCTCTCTCCCTTCCTCTCTCCCTCCCTTCCTCCCTCC
TCCCCAGACCCGGGCGATACAGGCACGGCTATCTAAGTACCTCGAGGAGG
AGGAAGATCAGACGCTCGCAGCCTTCCTCAAGACAGGAGGGAGGGAAGGA
GGTGGAGGAGGAAAGGGGGGGGGATGCAGGGAGAGGTGAGTAAAGAGGGA
GGGAGGGCGGGGTGAAGGGGAAGGAGAAGGAGGCGGATGATGGGATGGAG
TAAAGATCCAGTTGGAGGCGTGGACGAGAAATGTTTCCTCCGATGACGTG
ACAGGCAAAGCATAAAATACGGAGAAAGAGAGGACGAAACGATGCCCTGG
CACTTAACCCTCCCTCCTTACCTTCCTCCCCCCTTCCCTTCCCCAGCTCC
CGCCTGGATACGAAGGTGAGGCCTACGAGGAATCTTCCCATGACGCCTTC
CTCTCGTTCCTCAAGCGAGTCTCGCGATGCCCCGGTCAACTACTGCGTTA
CGCCTATGGAGGTCAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCAGA
CGGTGCTATGCTCATGGGAGTAGCGCTCTCCTCCCACCATTCCCTCGGCC
CTCCTCCCTTCCCCCCCCCCACTCACTTTCTTTTCCTAACCATCTCAGGC
AACCCCCTCTGGTCGACAAGCCTCCCTCCCTCCCTCCCTCCCTCCCTCAC
ATCGTGCCTGGCATGCGGGGCCGCGCGCCGTTTCGAGCTGCAGCTGA
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Coding sequence (CDS) from alignment at chr27:44927..45823+

>NO27G00150.1 ID=NO27G00150.1|Name=NO27G00150.1|organism=Nannochloropsis oceanica|type=CDS|length=396bp|location=Sequence derived from alignment at chr27:44927..45823+ (Nannochloropsis oceanica)
ATGGACACAGTCGCCGAGCCCGAGGAGGAGGAGGATGAGGAAGGGCACGA
GGAGACCCGGGCGATACAGGCACGGCTATCTAAGTACCTCGAGGAGGAGG
AAGATCAGACGCTCGCAGCCTTCCTCAAGACAGGAGGGAGGGAAGGAGGT
GGAGGAGGAAAGGGGGGGGGATGCAGGGAGAGCTCCCGCCTGGATACGAA
GGTGAGGCCTACGAGGAATCTTCCCATGACGCCTTCCTCTCGTTCCTCAA
GCGAGTCTCGCGATGCCCCGGTCAACTACTGCGTTACGCCTATGGAGGCA
ACCCCCTCTGGTCGACAAGCCTCCCTCCCTCCCTCCCTCCCTCCCTCACA
TCGTGCCTGGCATGCGGGGCCGCGCGCCGTTTCGAGCTGCAGCTGA
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Synonyms
Publications