NO26G01840.1, NO26G01840.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO26G01840.1
Unique Name	NO26G01840.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2982
Alignment location	chr26:630663..638243 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr26	genome	chr26:630663..638243 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO26G01840.1 vs.
Match: GBG26407.1 (Lateral signaling target protein 2-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 396.4 bits (1017), Expect = 2.700e-106
Identity = 255/582 (43.81%), Postives = 338/582 (58.08%), Query Frame = 0

Query:  402 PLLVTFFFSFLLPFLLL-----LLLPFPSSCRSSLLLLPSLLFLALPPSLLPPALLGLYWEKALPFLHTLISSSSLTLPSSSLDTLFLHRLLLPHPYLALASAVFLCKVYFPLRWWAFRSLHINGTAAVVIATYLALNLMA-KWRKLDDKEAKALYAKADVWLAPWVCRRFVSLRSVFVKFGQYIGGRTDMVPPDWASSLSLLHDQLPPCPPSYVRQAITVQFKKSFSTLFSSFDFSPLASASVAQVHRATLR-------GSGQEVVVKVQHQGIEALMNNDMKAAVRVFRLVAFLNRDFELLLYILKSWAEEIEKELDFRVEASNLERVRENLVVRG---------------GLDVILPQPVEGLVGKRAFAMDYIEGFKITDTAKLALHRVDREALMARVCQAYNHQFFVDGFFNADPHAGNLMVSI-QDGICRPVLLDFGMTVQVTTARRKGYCRLVFQASSLDVLGAGHALKAVGYTNSQSASHPERDVEFFQFLMRDTGTRASQREDADEYFKKRKEQKLVD-KAEGVDPNRYMKEVPPEMFFLFRMLGLIRGLCTTLEVKLPYLEIMADYAQKGLV 954
            P L T   +FLLP LLL     L   +P++       L SL F+A   +   P LLGL W   LPF            P   L TLF  R +     L   + +   + +F       R L I  TA VVI +Y    L+A +   +    +  ++   D+ +AP+ C   ++LRSVFVKFGQYIG R D++PP WA+ L+ L D LP     YV + I  +F      LF SF+  P+ASAS+AQVHRA LR        +  EV VKVQH+GIEA+M +D+ A  R+ RL+A+LN  F +   +L++W  E+ KELDF VE+SNL  VR NL   G               G  V++P+PV GLVG+RAF M +I+GFKITD  +LAL  VDR AL+ RV Q+Y    FVDGF +ADPH GNLMVS+  DG+ RPVLLDFGM V +    R GYCRLV   +++ V G   A+ ++GY NSQS  HPERD+EFF  L+RDTG R SQR+   ++ K+RK Q+  D + +     RY    P  + FLFR+LGLIRGLCTTL+  + Y++I+ DYA+ GL+
Sbjct:  293 PALATRLATFLLPKLLLTGALALAWAYPNN-------LFSLGFMAYCWNR--PLLLGLSW---LPFRPE---------PLQVLSTLFSTRPIAATIVLTGVTVLNCVRFFFG------RLLRIYSTAFVVIFSYYTTYLVAVRAMGMGTTASTRIFQSLDLIMAPFACNEILALRSVFVKFGQYIGSRADIIPPRWATVLAKLQDDLPADRFKYVERCIEQEFGHKIEKLFESFEPEPMASASIAQVHRAVLRPNVIPTISTPLEVAVKVQHEGIEAIMLSDVVAFRRIIRLIAWLNPRFAIAKTLLRAWETEMVKELDFNVESSNLATVRRNLRQVGLIADADDDYLDAACRGSHVLVPRPVRGLVGRRAFCMTFIQGFKITDLEQLALFGVDRAALVRRVVQSYGCMIFVDGFTSADPHPGNLMVSVSDDGMARPVLLDFGMVVTLEDPTRVGYCRLVNSIANISVSGLAEAIASIGYKNSQSDVHPERDLEFFAHLLRDTGDRKSQRQSQAQFRKRRKAQRAADLERDPAKEGRYFSGFPDSLIFLFRVLGLIRGLCTTLDAPISYVDILGDYAKLGLM 847

The following BLAST results are available for this feature:

BLAST of NO26G01840.1 vs.

BLAST of NO26G01840.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GBG26407.1	2.700e-106	43.81	Lateral signaling target protein 2-like [Aurantioc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO26G01840	NO26G01840	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01840.1	NO26G01840.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01840.1.cds1	NO26G01840.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds2	NO26G01840.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds3	NO26G01840.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds4	NO26G01840.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds5	NO26G01840.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds6	NO26G01840.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds7	NO26G01840.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds8	NO26G01840.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds9	NO26G01840.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds10	NO26G01840.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds11	NO26G01840.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds12	NO26G01840.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds13	NO26G01840.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds14	NO26G01840.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds15	NO26G01840.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds16	NO26G01840.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds17	NO26G01840.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds18	NO26G01840.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds19	NO26G01840.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds20	NO26G01840.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds21	NO26G01840.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01840.1.cds22	NO26G01840.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr26:630663..638243-
coding sequence from alignment at chr26:630663..638243-

mRNA sequence

>NO26G01840.1 ID=NO26G01840.1|Name=NO26G01840.1|organism=Nannochloropsis oceanica|type=mRNA|length=2982bp
ATGAATGCCGCTGGTCCTGTAGGCGCAGGGAAAGAGAAAGAACTAACGTA
TGCTGTGGAGAGGTTCTTCGATTTGCTGCAGGAGAGTCTCTCTGCATCTC
GCCCTACCGATCTGGTCCCTGTCGTCTTCGAGATCAAAGGCGCGTCTTCC
TACCTCATTTGTAGGGAGGGGAACATCGAGAAGCGGCTTCCGGGAGCGGG
AGAAGAGGAAGGGAAGGAGGGACAGGTGATAGGCTGTCGCATCACGTGTG
CCCTGCCCACCCTCCTCGGCCTGGCCAGCGGCCGTCTGTCTCCTTCCACA
GCGTTCCTGACAGGAGCTGTCCGCGTCTCGGGCGACATCAAGAAAGTCCT
TGCAGGTTTAGGCCCCTTTTTGAAAGACGCCACGACGCAATGGATGGACG
AGAATCCAGATCTAGTCACTTATCTCTCAAAGGGGAGAGAGACAAAGGGA
GGGAGGAAGGGGAAAAAGAAAAATAAGGGGAGCAGGGACGAGCTCCTGCT
TTCAGAAGCCACTGCCTCTCATCTCTTTGTCGACAGGGCTGAGTGGGAAG
ACGACGACTCTCGGTCCGACTGTACCTTCTGCCATCGGAGCTTCAACCTT
TCCCGGTGGCGGCACCACTGCCGCATGTGCGGGCTGCTCGTCTGTCAGTC
TTGCTCCGAGGAGAGGATCTTAGGCCGCCGTGTTTGCGCCTCTTGCTGCG
ACTCCCTCCTCCACACCTACGTCAGCACACATTCATCCTCCGGGCTGCTC
CTGGGAGGAGAGGGCGAGGGAGGGAGAGAGGGAGGGAGGGAGGAGGAGCA
GCTGTGCACGTCGTCGTTCTCGTCCATGACGGGAGAGAGGGAGGGAGGGA
GGGAGGGACGGGGTCACCGGCCTTCCATTTACCAGCTGCAGGATTCTCAG
TTTACCAGCAGCAGCAGCAGTCACAGTCGCGAGGGTGTTCTCTACGACCT
GATCCAAAGGCGGCTCGATGCACTGCAGGCAATCGAGATTGCCTTCTCTC
CCCTCCCGCCCCCTCCCACCTCCTCTACCACCACCTCCTCCTCCACCTCC
TCCTGCCCCTCCTCCCTTTCCTCCTCCCCGCGACAAGAACCCCGCAGGGG
GGATGGAAAGTCAACAAACACGACAAGACCCGTCCCTCCCTCCCTCCCTG
CCTCTCTCCCTCCCTCCCCTTCCTCCGCTTCATCTTCACCCACGACTCGA
GAGCCTTTGCTAGTCACTTTCTTCTTTTCTTTCCTCCTCCCCTTCCTCCT
GCTCCTCCTCCTCCCCTTCCCCTCCTCCTGCCGGAGCTCCCTCCTCCTCC
TTCCCTCCCTCCTCTTCCTCGCCCTCCCTCCCTCCCTCCTCCCCCCTGCC
CTCCTCGGTCTGTACTGGGAGAAGGCCTTGCCTTTCCTTCACACCCTCAT
CTCCTCCTCATCCTTAACCCTCCCCTCCTCCTCCCTCGACACCCTCTTCC
TCCACCGCCTCCTCCTTCCTCACCCTTACCTGGCGCTGGCCTCGGCCGTC
TTTCTGTGCAAAGTTTACTTCCCGTTGCGGTGGTGGGCCTTCCGCAGCCT
GCACATCAACGGCACGGCCGCCGTCGTGATCGCCACCTACCTTGCCTTAA
ACTTGATGGCCAAGTGGAGGAAACTTGACGACAAGGAAGCCAAAGCGCTC
TATGCCAAGGCCGACGTCTGGCTCGCTCCCTGGGTCTGTCGCCGCTTCGT
CTCCCTTCGGAGCGTCTTTGTCAAATTCGGACAGTACATCGGGGGTCGCA
CGGACATGGTGCCTCCCGATTGGGCCTCCTCCCTCTCCCTCCTTCACGAC
CAGCTCCCCCCCTGCCCCCCCTCCTACGTTCGGCAAGCCATCACCGTCCA
ATTCAAGAAATCCTTCTCCACTCTTTTCTCCTCCTTCGACTTCTCCCCCC
TGGCCTCCGCCTCTGTCGCGCAGGTGCACAGGGCGACCCTGCGAGGAAGC
GGCCAGGAGGTCGTCGTCAAGGTCCAGCACCAGGGCATAGAAGCCCTGAT
GAACAACGACATGAAGGCCGCCGTGCGCGTCTTCCGTCTCGTGGCTTTCC
TCAACCGCGACTTCGAACTGCTGCTCTACATATTAAAGTCCTGGGCTGAG
GAGATCGAGAAGGAATTGGACTTCCGCGTGGAGGCATCCAACCTTGAGAG
GGTGCGGGAGAATCTAGTCGTTCGCGGGGGGCTGGACGTCATCTTGCCGC
AGCCTGTCGAAGGCCTGGTGGGAAAGCGCGCGTTTGCCATGGACTACATC
GAGGGGTTCAAGATCACCGACACGGCCAAGCTCGCGCTGCACCGTGTGGA
CCGCGAGGCCCTCATGGCTCGGGTCTGCCAGGCGTACAACCACCAATTTT
TCGTCGACGGATTCTTTAATGCCGATCCCCACGCGGGCAACTTGATGGTC
TCGATCCAAGACGGCATATGTCGCCCTGTCCTCCTCGACTTCGGCATGAC
TGTGCAAGTCACCACCGCCCGTCGCAAGGGATATTGCCGGCTGGTCTTCC
AAGCGAGCTCTCTCGACGTTTTGGGCGCAGGGCACGCACTCAAGGCGGTG
GGGTATACCAATTCACAGTCTGCGTCACACCCTGAGCGTGACGTGGAGTT
CTTCCAGTTTCTCATGCGCGATACGGGTACTCGCGCTTCCCAACGGGAGG
ACGCCGACGAGTACTTTAAGAAGCGGAAGGAGCAGAAGCTGGTGGACAAG
GCGGAAGGCGTCGACCCCAACCGATACATGAAGGAGGTGCCGCCCGAGAT
GTTCTTCCTCTTCCGGATGCTAGGGCTGATCCGTGGGTTGTGTACCACCC
TGGAGGTGAAGCTGCCGTACCTGGAGATCATGGCCGACTACGCTCAGAAG
GGCCTCGTGCTGGGCTACGACCGGAAGCTCCGCGCCACCCGCCTCCTCTC
CCTCCCAGCCCGCCCCCCCTGCCCCTTGAAGTCAAATTGCAGCGCCTCTT
GCTCTCCCTGTGCGGGTCCCGCAAGCTTCTAG

protein sequence of NO26G01840.1

>NO26G01840.1-protein ID=NO26G01840.1-protein|Name=NO26G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=994bp
MNAAGPVGAGKEKELTYAVERFFDLLQESLSASRPTDLVPVVFEIKGASS
YLICREGNIEKRLPGAGEEEGKEGQVIGCRITCALPTLLGLASGRLSPST
AFLTGAVRVSGDIKKVLAGLGPFLKDATTQWMDENPDLVTYLSKGRETKG
GRKGKKKNKGSRDELLLSEATASHLFVDRAEWEDDDSRSDCTFCHRSFNL
SRWRHHCRMCGLLVCQSCSEERILGRRVCASCCDSLLHTYVSTHSSSGLL
LGGEGEGGREGGREEEQLCTSSFSSMTGEREGGREGRGHRPSIYQLQDSQ
FTSSSSSHSREGVLYDLIQRRLDALQAIEIAFSPLPPPPTSSTTTSSSTS
SCPSSLSSSPRQEPRRGDGKSTNTTRPVPPSLPASLPPSPSSASSSPTTR
EPLLVTFFFSFLLPFLLLLLLPFPSSCRSSLLLLPSLLFLALPPSLLPPA
LLGLYWEKALPFLHTLISSSSLTLPSSSLDTLFLHRLLLPHPYLALASAV
FLCKVYFPLRWWAFRSLHINGTAAVVIATYLALNLMAKWRKLDDKEAKAL
YAKADVWLAPWVCRRFVSLRSVFVKFGQYIGGRTDMVPPDWASSLSLLHD
QLPPCPPSYVRQAITVQFKKSFSTLFSSFDFSPLASASVAQVHRATLRGS
GQEVVVKVQHQGIEALMNNDMKAAVRVFRLVAFLNRDFELLLYILKSWAE
EIEKELDFRVEASNLERVRENLVVRGGLDVILPQPVEGLVGKRAFAMDYI
EGFKITDTAKLALHRVDREALMARVCQAYNHQFFVDGFFNADPHAGNLMV
SIQDGICRPVLLDFGMTVQVTTARRKGYCRLVFQASSLDVLGAGHALKAV
GYTNSQSASHPERDVEFFQFLMRDTGTRASQREDADEYFKKRKEQKLVDK
AEGVDPNRYMKEVPPEMFFLFRMLGLIRGLCTTLEVKLPYLEIMADYAQK
GLVLGYDRKLRATRLLSLPARPPCPLKSNCSASCSPCAGPASF*

mRNA from alignment at chr26:630663..638243-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO26G01840.1 ID=NO26G01840.1|Name=NO26G01840.1|organism=Nannochloropsis oceanica|type=mRNA|length=7581bp|location=Sequence derived from alignment at chr26:630663..638243- (Nannochloropsis oceanica)
ATGAATGCCGCTGGTCCTGTAGGCGCAGGGAAAGAGAAAGAACTAACGTA
TGCTGTGGAGAGGTTCTTCGATTTGCTGCAGGTATACGAGACAGGGAGCG
AGCGCGAGGGAGGTTTTGGGAGCTCGGAAGAGAGGGAGGACGTGCCATAA
ATTTGATATGCAGGAATGACGAAAGCTGGCAAATGGTCTATGTATTGGCG
GGAATCATTGACCATGTACGTAGTCTTACCATCCCTCCCTCCGTTCCCTC
TCTCCCTCCCTCCCTCTCCTGTAGGAGAGTCTCTCTGCATCTCGCCCTAC
CGATCTGGTCCCTGTCGTCTTCGAGATCAAAGGCGCGTCTTCCTACCTCA
TTTGTAGGGAGGGGAACATCGAGAAGCGGCTTCCGGGAGCGGGAGAAGAG
GAAGGGAAGGAGGGACAGGTGATAGGCTGTCGGTGCGTACATGTGCCTGG
AACGCGTCGGCATAACAGCCCTTTCCCGTTTTTTGTCGGGTCGAAGTCAT
ATGCCGAGCGAATGGTTGCGCTATGTCTGACTCGGCACAGAGGCATTCAT
ACCCCTCCTCCGCTCCCTCCCTCTCATCCCTCCCTGCCCCCCTCCCTCCA
GCATCACGTGTGCCCTGCCCACCCTCCTCGGCCTGGCCAGCGGCCGTCTG
TCTCCTTCCACAGCGTTCCTGACAGGAGCTGTCCGCGTCTCGGGCGACAT
CAAGAAAGTCCTTGCAGGTTTAGGTACGTAGGGAGGGAAGGGGTGACGGA
AGGAAGGAGAAAGGGAGGGAGCCTTGTGAAAGATCTCGTTGCACTGTACT
GTCTGTCGGCGTCTCCTGAGAGATTGAAGAAATGTAAGCCGGATAAGGCG
GGCAGTGAGGGAAGGCGAATCGGTGAGAAGAAGGGAGAGTGACAGAGAGC
AAACATATTGTTTTGTATCGTATGTTTTGTTTCAACACTCGCCATAATCG
AAGCCCATCATCCCTTTCATTTGCCCTCTCCCTCCCTCCTTCCCTCCCTC
CCTCCCTCCCTCAGGCCCCTTTTTGAAAGACGCCACGACGCAATGGATGG
ACGAGAATCCAGATCTAGTCACTTATCTCTCAAAGGGGAGAGAGACAAAG
GGAGGGAGGAAGGGGAAAAAGAAAAATAAGGGGAGCAGGGACGAGCTCCT
GCTTTCAGAAGGTCCATCGTCCACACATACACCCTCCCTCCCTCCCTCCC
TCCCTTCCTTGTTCGCTTCTTTCTTTCTTCTCTCCTTCCCTCTTCCTCTC
CATGTATATTCATATATAACCTTCCGTCCCTCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGCCACTGCCTCTCAT
CTCTTTGTCGACAGGGCTGAGTGGGAAGACGACGACTCTCGGTCCGACTG
TACCTTCTGCCATCGGGTACGTCCTATCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCGTTCACTCCCGCTTTTCGTCCTCATCGGATCCTGTGTC
GTTCGGAAGGACCAGCCAACAGCACTCCCCCCTCCCTCCCTCCTTCCCTC
CCTCCCTCCCACACCAGAGCTTCAACCTTTCCCGGTGGCGGCACCACTGC
CGCATGTGCGGGCTGCTCGTCTGTCAGTCTTGCTCCGAGGAGAGGATCTT
AGGTGAGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGGGTGGCAGTG
GTCACTGTCGACAGGTGAAATTCTCTCCCTTCTCCTCCCGCTTCCTCCCT
CCCTCCTTTCCTCCATCGCCTTCTGCTCCAAGTTTGATCCGTCAGCCATA
ACCGCATTTTACACCCACCCCGTCCCTCCCTCCTTCTCTCCCTCCCCTCA
GGCCGCCGTGTTTGCGCCTCTTGCTGCGACTCCCTCCTCCACACCTACGT
CAGCACACATTCATCCTCCGGGCTGCTCCTGGGAGGAGAGGGCGAGGGAG
GGAGAGAGGGAGGGAGGGAGGAGGAGCAGCTGTGCACGTCGTCGTTCTCG
TCCATGACGGGAGAGAGGGAGGGAGGGAGGGAGGGACGGGGTCACCGGCC
TTCCATTTACCAGCTGCAGGATTCTCAGTTTACGTAAGTCCTTGTTACGT
CCACCCCCTTCTCTCCATCCCTCCCTTCCTTTCTCCCTTCCTCCCTCCCT
CCCTCCCTCCATATCGCTTTCTCGCTTCAATTGTTTTCCCCTCCCTCCCT
CTCTCCTTCCCTCGCTCCTTCCCTCGCTCCTTCCCTCCCCGCCACTACCA
CCACCACCGCCGCCGCCATCAGCAGCAGCAGCAGCAGCAGTCACAGTCGC
GAGGGTGTTCTCTACGACCTGATCCAAAGGCGGCTCGATGCACTGCAGGT
GAGTGAGTGAGGGAGGCAGGGAGGGAAAGAACAGTCAAGAAAGAGGGGCA
GGGAGGGAGGGAGGGGGGGGAGAGGGAGGGAGGGAGAGAGACACCCTCCG
GCGATTGACAGCCCTCATCGTACATCACAGGCAATCGAGATTGCCTTCTC
TCCCCTCCCGCCCCCTCCCACCTCCTCTACCACCACCTCCTCCTCCACCT
CCTCCTGCCCCTCCTCCCTTTCCTCCTCCCCGCGACAAGAACCCCGCAGG
GGGGATGGAAAGTCAACAAACACGACAAGACCCGTCCCTCCCTCCCTCCC
TGCCTCTCTCCCTCCCTCCCCTTCCTCCGCTTCATCTTCACCCACGACTC
GAGAGCCTTTGCTAGTCACTTTCTTCTTTTCTTTCCTCCTCCCCTTCCTC
CTGCTCCTCCTCCTCCCCTTCCCCTCCTCCTGCCGGAGCTCCCTCCTCCT
CCTTCCCTCCCTCCTCTTCCTCGCCCTCCCTCCCTCCCTCCTCCCCCCTG
CCCTCCTCGGTCTGTACTGGGAGAAGGTGAGGACGACGAGGGAGGAGGAG
GGGGAGGAGGAGAGGGAGGACGAGAGGGAGGAGGGAGGGAGGGGCGATGG
AAGGAGGGCGAAGGAACGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGG
AAGGGCAGGCAAGGGGGGGGGAGAAGAGGAGGGAGGGTGGGAGAGAGGAA
GGGAGAAAAAACATTTGCAAAGTTTTTCCTATAACTCTTTCCCACACACC
CATCCAGGCCTTGCCTTTCCTTCACACCCTCATCTCCTCCTCATCCTTAA
CCCTCCCCTCCTCCTCCCTCGACACCCTCTTCCTCCACCGCCTCCTCCTT
CCTCACCCTTACCTGGCGCTGGCCTCGGCCGTCTTTCTGTGCAAAGTTTA
CTTCCCGTTGCGGTGGTAAGGGAGGGAGGAAGGAAGGGAGGGAGGCAGAG
AACGCTGGATGCTCCGACTGCCTTGTCGGTTTTTCCTCTGTTTTTGTTTC
GAGGTCTTTCCTCCCTCTTTCCCGCCCTCCCTCCCTCCGTTGCCACGGTA
TCCACTGCCCCCGCCTTTTCCTCGTACGCCCCCTGCTCCTTGTTGTTAGA
TGTATTTGTCCATTCGGCACCTTCACGAATACCCCTCCCTCCCTCCCTCC
CTCCGTTGCCACGGTATCCGCTGCCCCCGCCTTTTCCTCGTACGCCCCCT
CCCCCTTGTTGTTAAATGTATTTGTCCATTCGACACCTTCATGAATACCC
CTCCCTCCCGCCTTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCTT
CAGGTGGGCCTTCCGCAGCCTGCACATCAACGGCACGGCCGCCGTCGTGA
TCGCCACCTACCTTGCCTTAAACTTGATGGCCAAGTGGAGGAAACTTGAC
GACAAGGAAGCCAAAGCGGTGAGGGAGGGAGGGAGGGAGGGAAAGAGGGA
AGGTGGTTTCTCTTGCCGTGCACAAACAGAACAGCCCATGTCCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCCTCCCTCCAGCTCTATGCCAAGGCCGA
CGTCTGGCTCGCTCCCTGGGTCTGTCGCCGCTTCGTCTCCCTTCGGAGCG
TCTTTGTCAAATTCGGACAGGTAATCCCTCCCTCCTTCCTTCTTCCCCTT
CGCCGGTATCCTCCCTCTGACCCCGCCCTCCCCCCCCCTCCCTCCCTCCC
TCCCACCCTCCACTTTTCAGTACATCGGGGGTCGCACGGACATGGTGCCT
CCCGATTGGGCCTCCTCCCTCTCCCTCCTTCACGACCAGCTCCCCCCCTG
CCCCCCCTCCTACGTTCGGCAAGCCATCACCGTCCAATTCAAGGTGGGTC
TTGCCCTCCCTCCCTCCGCTCCTCCCTCCCTCCCTCCCCCTCTTCCTTCC
TCCCTCCCCTCCCTCCCTTCCTCCACCCTCTTCTCCTCCCGTCACATCAT
TCCCCCCCACCTCTGCACCGTCTCACGCCCCCTCTCATTCCCTCCCTTCC
CCTCCTCCCTCCCCCTCTATCCCCGTAGAAATCCTTCTCCACTCTTTTCT
CCTCCTTCGACTTCTCCCCCCTGGCCTCCGCCTCTGTCGCGCAGGTGCAC
AGGGCGACCCTGCGAGGAAGCGGCCAGGAGGTCGTCGTCAAGGTGCCCCC
CTCCCTCCCTCCCATCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCA
TCCTCCCTCCCTCCTTCCCTTTATTGCAACAGCGAGTCTCTTTCCCTTCC
ATTCTCTCCCCCTCCTTCCCCCCCTGCTCTCTCAGGTCCAGCTCAAGGGC
ACGACCCTTACCCCTCCCCTCTTTCCCCCCCTCCCTCTCTCCCCTCCTCC
CCCAGGTCCAGCACCAGGGCATAGAAGCCCTGATGAACAACGACATGAAG
GCCGCCGTGCGCGTCTTCCGTCTCGTGGCTTTCCTCAACCGCGACTTCGA
ACTGCTGCTCTACATATTAAAGTAATTCCTTGCCTCACCTTCCTCCCCCC
TTCCTTCCTCTCTCCCTCCTCCGATGCGTGTGTAACGACCGATGCCACTT
GGCCCGAGGGAGGGAGGGAGAGGAAAAGGGAAGGAGGGAGAGAAGGGAGG
GAGCCTTAAATTCCAAACTTCAAGTGTCATCTGACAACGCCCTCATTCCC
CATTCTCTACCCTTTTTTTTCTCCCTCCCTCGCTTTTCGCAGGTCCTGGG
CTGAGGAGATCGAGAAGGAATTGGACTTCCGCGTGGAGGCATCCAACCTT
GAGAGGGTGCGGGAGAATCTAGTCGTTCGCGGGGGGCTGGACGTCATCTT
GCCGCAGCCTGTCGAAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAATCGAGTTTGCAACATGTTATACTGCGCTTTCTCGGACCCCCCTGTCC
CTTCCCAACCTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCAGGCCTGGTGGGAAAGCGCGCGTT
TGCCATGGACTACATCGAGGGGTTCAAGATCACCGACACGGCCAAGCTCG
CGCTGCACCGTGTGGACCGCGAGGCCCTCATGGCTCGGGTCTGCCAGGCG
TACAACCACCAATTTTTCGTCGACGGATTCTTTAATGGTAGGAAGGGAGG
GAGTGGGAGGGAGAGAAGAGATGGCGTCGGTCTGTCTGCTTGTTTCCCAC
CGCAGGCGTCTGCCCGCTCACTTCACGACTGACGCCTCCCATCCGTCGTC
CCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTTCCTCCCAGCCGATCCCCA
CGCGGGCAACTTGATGGTCTCGATCCAAGACGGCATATGTCGCCCTGTCC
TCCTCGACTTCGGCATGACTGTGCAAGTCACCACCGCCCGTCGCAAGGTG
AGTCTCGTCCTGCTCCCCTCCCTCCCCCTTTCCCTCCCTCTTTCCCTCCC
TCCCTTCCCCCCCCATCTCCTTTCCTGCTCTCTGGCGTCGGGCCTACTTG
AGTCAGCTGCAGTGAGACTCCACAGACCCGCCCACGCAGGTAGAGACACT
ACGAAAAAGTACCTCTCCCAAGTCTCAGGAAGCCTGACGGCCATAGGGAG
GGGGACCAGCGTCTGCTCTCTCCGGACGATCCCTCTCGACAAGTTAGGAG
CCGGGCAAGCGCTCAAGGATATGAACATCCTTATCTTTTATGCCCCACTT
TCCCTCCCACCCTTTCTCCCTCATCCTACGCAGGGATATTGCCGGCTGGT
CTTCCAAGCGAGCTCTCTCGACGTTTTGGGCGCAGGGCACGCACTCAAGG
CGGTGGGGTATACCAATTCACAGTCTGCGTCACACCCTGAGCGTGACGTG
GAGTTCTTCCAGTTTCTCATGCGCGATACGGGTAAGGAGGTTAGGGAGCA
GAAGGCGAGAAGCGCAGATGGTTCGAAGGAGCCGATTTTCTCAATCCAGT
GGACGGATTCAGTAACTGAAGAGCCCGCATTCCTCCTCCATCCTCCCTCA
CTTCCTCCCTCCTTCCCTCCCTCCCTTCAGGTACTCGCGCTTCCCAACGG
GAGGACGCCGACGAGTACTTTAAGAAGCGGAAGGAGCAGAAGCTGGTGGA
CAAGGCGGAAGGCGTCGACCCCAACCGATACATGAAGGAGGTGAGGACCG
AGGGAGGAGGTGTCGAGAGAGGGGGTGTGATAGCCACGATCGAGCAGACA
GGTCAGGACGTGAGACATCCATCTAATTTTTTCTCCTCTTCCTTCCTCCC
TGCCCTCCCTCCTTCCCTGCCCTCCATCCCTCCCTCCCTGCCCTCCCTTC
ATCACCGCCCAGGTGCCGCCCGAGATGTTCTTCCTCTTCCGGATGCTAGG
GCTGATCCGTGGGTTGTGTACCACCCTGGAGGTGAAGCTGCCGTACCTGG
AGATCATGGCCGACTACGCTCAGAAGGGCCTCGTGCTGGGCTACGACCGG
AAGGTGCGTTAGGTCACAAAGTGGTGTGTTGTGTCACCTTGTGATGTTGT
AGATTGTGTACGACCGGAAGGTGCGTTAGGTCACAGAGTGGTGTGTTGTG
TCACCTTGTGATGTTGTAGATTGTGTACGACCGGAAGGTGCGTTAGGTCA
CAAAGTGGTGTGTTGTGTCACCTTGTGATGCTGTAAACTGTGCGTCGTCG
TACTATTCTATGGATATAAATTGTATTGTGCTGTGTCGTGTCATCGTGTG
GAGTTGTGTCACCGTGTGGTGTTGTGTGTTGTGTCGTCGTACTTTACTAT
GAATATAAATTGTATGGATATAAATTGTATTGTGTTGTGTTGTGTTGTGT
CACCGTGTGGTGTGGAGTGTGTTGTCTTATGTTGCATTTCAATTGGATCT
TAAGTGCATCATGTCATGGAGTGGTGGGGTGTGATGTATTGACAGGGCCT
GACAACTCTGGATCAGAAGGCCCGCCTGTCAGCCACGCGCAAATGTCCGA
TTTATTGGTTTCGCTACACTTTTGTATGTCAGATTGTGTGGATCTAGAAA
GCAGGGAAGTGAAAGATGCCTCCAATCGCTACCCTCTCTCGCTTTATATT
ACTGACTCGACGCTTGACTCATTCCCTTCCCCTTTGTCCCCCCTCCCTCC
CTTCCCCCTTCGTCTTCCTCGTAAAGCTCCGCGCCACCCGCCTCCTCTCC
CTCCCAGCCCGCCCCCCCTGCCCCTTGAAGTCAAATTGCAGCGCCTCTTG
CTCTCCCTGTGCGGGTCCCGCAAGCTTCTAG

Coding sequence (CDS) from alignment at chr26:630663..638243-

>NO26G01840.1 ID=NO26G01840.1|Name=NO26G01840.1|organism=Nannochloropsis oceanica|type=CDS|length=2982bp|location=Sequence derived from alignment at chr26:630663..638243- (Nannochloropsis oceanica)
ATGAATGCCGCTGGTCCTGTAGGCGCAGGGAAAGAGAAAGAACTAACGTA
TGCTGTGGAGAGGTTCTTCGATTTGCTGCAGGAGAGTCTCTCTGCATCTC
GCCCTACCGATCTGGTCCCTGTCGTCTTCGAGATCAAAGGCGCGTCTTCC
TACCTCATTTGTAGGGAGGGGAACATCGAGAAGCGGCTTCCGGGAGCGGG
AGAAGAGGAAGGGAAGGAGGGACAGGTGATAGGCTGTCGCATCACGTGTG
CCCTGCCCACCCTCCTCGGCCTGGCCAGCGGCCGTCTGTCTCCTTCCACA
GCGTTCCTGACAGGAGCTGTCCGCGTCTCGGGCGACATCAAGAAAGTCCT
TGCAGGTTTAGGCCCCTTTTTGAAAGACGCCACGACGCAATGGATGGACG
AGAATCCAGATCTAGTCACTTATCTCTCAAAGGGGAGAGAGACAAAGGGA
GGGAGGAAGGGGAAAAAGAAAAATAAGGGGAGCAGGGACGAGCTCCTGCT
TTCAGAAGCCACTGCCTCTCATCTCTTTGTCGACAGGGCTGAGTGGGAAG
ACGACGACTCTCGGTCCGACTGTACCTTCTGCCATCGGAGCTTCAACCTT
TCCCGGTGGCGGCACCACTGCCGCATGTGCGGGCTGCTCGTCTGTCAGTC
TTGCTCCGAGGAGAGGATCTTAGGCCGCCGTGTTTGCGCCTCTTGCTGCG
ACTCCCTCCTCCACACCTACGTCAGCACACATTCATCCTCCGGGCTGCTC
CTGGGAGGAGAGGGCGAGGGAGGGAGAGAGGGAGGGAGGGAGGAGGAGCA
GCTGTGCACGTCGTCGTTCTCGTCCATGACGGGAGAGAGGGAGGGAGGGA
GGGAGGGACGGGGTCACCGGCCTTCCATTTACCAGCTGCAGGATTCTCAG
TTTACCAGCAGCAGCAGCAGTCACAGTCGCGAGGGTGTTCTCTACGACCT
GATCCAAAGGCGGCTCGATGCACTGCAGGCAATCGAGATTGCCTTCTCTC
CCCTCCCGCCCCCTCCCACCTCCTCTACCACCACCTCCTCCTCCACCTCC
TCCTGCCCCTCCTCCCTTTCCTCCTCCCCGCGACAAGAACCCCGCAGGGG
GGATGGAAAGTCAACAAACACGACAAGACCCGTCCCTCCCTCCCTCCCTG
CCTCTCTCCCTCCCTCCCCTTCCTCCGCTTCATCTTCACCCACGACTCGA
GAGCCTTTGCTAGTCACTTTCTTCTTTTCTTTCCTCCTCCCCTTCCTCCT
GCTCCTCCTCCTCCCCTTCCCCTCCTCCTGCCGGAGCTCCCTCCTCCTCC
TTCCCTCCCTCCTCTTCCTCGCCCTCCCTCCCTCCCTCCTCCCCCCTGCC
CTCCTCGGTCTGTACTGGGAGAAGGCCTTGCCTTTCCTTCACACCCTCAT
CTCCTCCTCATCCTTAACCCTCCCCTCCTCCTCCCTCGACACCCTCTTCC
TCCACCGCCTCCTCCTTCCTCACCCTTACCTGGCGCTGGCCTCGGCCGTC
TTTCTGTGCAAAGTTTACTTCCCGTTGCGGTGGTGGGCCTTCCGCAGCCT
GCACATCAACGGCACGGCCGCCGTCGTGATCGCCACCTACCTTGCCTTAA
ACTTGATGGCCAAGTGGAGGAAACTTGACGACAAGGAAGCCAAAGCGCTC
TATGCCAAGGCCGACGTCTGGCTCGCTCCCTGGGTCTGTCGCCGCTTCGT
CTCCCTTCGGAGCGTCTTTGTCAAATTCGGACAGTACATCGGGGGTCGCA
CGGACATGGTGCCTCCCGATTGGGCCTCCTCCCTCTCCCTCCTTCACGAC
CAGCTCCCCCCCTGCCCCCCCTCCTACGTTCGGCAAGCCATCACCGTCCA
ATTCAAGAAATCCTTCTCCACTCTTTTCTCCTCCTTCGACTTCTCCCCCC
TGGCCTCCGCCTCTGTCGCGCAGGTGCACAGGGCGACCCTGCGAGGAAGC
GGCCAGGAGGTCGTCGTCAAGGTCCAGCACCAGGGCATAGAAGCCCTGAT
GAACAACGACATGAAGGCCGCCGTGCGCGTCTTCCGTCTCGTGGCTTTCC
TCAACCGCGACTTCGAACTGCTGCTCTACATATTAAAGTCCTGGGCTGAG
GAGATCGAGAAGGAATTGGACTTCCGCGTGGAGGCATCCAACCTTGAGAG
GGTGCGGGAGAATCTAGTCGTTCGCGGGGGGCTGGACGTCATCTTGCCGC
AGCCTGTCGAAGGCCTGGTGGGAAAGCGCGCGTTTGCCATGGACTACATC
GAGGGGTTCAAGATCACCGACACGGCCAAGCTCGCGCTGCACCGTGTGGA
CCGCGAGGCCCTCATGGCTCGGGTCTGCCAGGCGTACAACCACCAATTTT
TCGTCGACGGATTCTTTAATGCCGATCCCCACGCGGGCAACTTGATGGTC
TCGATCCAAGACGGCATATGTCGCCCTGTCCTCCTCGACTTCGGCATGAC
TGTGCAAGTCACCACCGCCCGTCGCAAGGGATATTGCCGGCTGGTCTTCC
AAGCGAGCTCTCTCGACGTTTTGGGCGCAGGGCACGCACTCAAGGCGGTG
GGGTATACCAATTCACAGTCTGCGTCACACCCTGAGCGTGACGTGGAGTT
CTTCCAGTTTCTCATGCGCGATACGGGTACTCGCGCTTCCCAACGGGAGG
ACGCCGACGAGTACTTTAAGAAGCGGAAGGAGCAGAAGCTGGTGGACAAG
GCGGAAGGCGTCGACCCCAACCGATACATGAAGGAGGTGCCGCCCGAGAT
GTTCTTCCTCTTCCGGATGCTAGGGCTGATCCGTGGGTTGTGTACCACCC
TGGAGGTGAAGCTGCCGTACCTGGAGATCATGGCCGACTACGCTCAGAAG
GGCCTCGTGCTGGGCTACGACCGGAAGCTCCGCGCCACCCGCCTCCTCTC
CCTCCCAGCCCGCCCCCCCTGCCCCTTGAAGTCAAATTGCAGCGCCTCTT
GCTCTCCCTGTGCGGGTCCCGCAAGCTTCTAG

Synonyms

Publications