NO26G01790.1, NO26G01790.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO26G01790.1
Unique Name	NO26G01790.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3281
Alignment location	chr26:598248..604789 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr26	genome	chr26:598248..604789 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO26G01790.1 vs.
Match: CBN79274.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 280.8 bits (717), Expect = 1.500e-71
Identity = 189/505 (37.43%), Postives = 268/505 (53.07%), Query Frame = 0

Query:  285 AAAAAAAAADGASSIFLLLDTHPLLLSSPLSSLPSSSSSSSLTAEALITAGEETFASLFCNGNRETARLLLFSHQGMTTTTSSNSSSSNNSSLPLRLGALLVLLAWCLWDCLFDDSLGKSIFHDPSFKIFRGLSNVILLLWGLGVVLFVINAAGIDYRRILGLSSSSSSSSSSSSSSSSSSSSLPSSLPPSSSLLVHALFLHASNLSIAFLAVFLCFYKALRGVFLQQHGALPVPLAHSFPVLLFVGMNVWFFRRLNPRLKIQRLLRNTILAPFAPVSFTDALVGDVLTSVVRVLVDLAFAALYSLRWVATFLSKSNRSELLAQDPISHTAFFSSLLLPFLTFSPLWWRLHQNFRKAWEEATRFPYYANALKYALSLTVSSFVTFNPMLKTSGWWRLSFVLSTLYQIYWDVSRDWSLLQWNDLTGRFVFRPRLLLFKSRRPYCLAMAVNCVLRFSWSLTIVPEGIGLFSHKDAQLHLSSFLAAAEIVRRGLWCVLRLEHEHLSLY 790
            A A  A   +G  ++         LL  PL S    + +        +   E  +ASLFCNG+ + AR  L      T   SS+   +       RLGA  VLLAW +WDC+ DDSLGK ++HDP+FKI+RGL N++LL++  GV ++V    GIDY R L L                     P   P         ++    NLSIAFL  F+CFYK LRGV L     +P+  AH+FP+LL   M + F    + R  + R+L  TI++PF  V F +  VGD+LTSVVRVL+D+AFA LY L  V  +L        L+ DPIS   +F +LL+P L  +PLWWR  QN R+++E   R+P+  NALKYA +++VS F TF P +K+S  W   FV +TLYQ  WDV  DW LL+  D  G+ +     L++ ++  Y      N +  F  ++T+VPE        +   + + F+ A E + + +W  +R+E+EHL +Y
Sbjct:  398 AKAGGAVGGEGVGALSKEKAMKVWLLEQPLFSARDLNGT--------LAGAELLYASLFCNGDVDVARTAL------TFKASSSLRGNRRFDFGYRLGAATVLLAWAMWDCIADDSLGKDVWHDPAFKIYRGLGNLVLLVYMWGVNIWVWRRFGIDYERCLSLDPKG-----------------PRVDP------CEQVWNAGCNLSIAFLVSFICFYKCLRGVLLNPTW-VPIQFAHTFPLLLLFYMLLCFLTPWHERKGLLRVLWTTIISPFGQVRFLEGYVGDILTSVVRVLIDVAFAFLYFLSGVRGWLGNGLD---LSNDPISSDPWFQNLLVPLLMVAPLWWRFQQNLRRSYETRQRWPHLGNALKYATAMSVSLFGTFQPQMKSSWVWVFCFVFATLYQFSWDVVMDWDLLRCRD--GKSLPLGPPLVYPNKNLYTNVAVGNLLPSFPGTVTLVPEKPPKLFPPEFPNYPNPFIPATENLPKTMWGFIRVENEHLRIY 859

The following BLAST results are available for this feature:

BLAST of NO26G01790.1 vs.

BLAST of NO26G01790.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN79274.1	1.500e-71	37.43	conserved unknown protein [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO26G01790	NO26G01790	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01790.1	NO26G01790.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01790.1.cds1	NO26G01790.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds2	NO26G01790.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds3	NO26G01790.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds4	NO26G01790.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds5	NO26G01790.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds6	NO26G01790.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds7	NO26G01790.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds8	NO26G01790.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds9	NO26G01790.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds10	NO26G01790.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds11	NO26G01790.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds12	NO26G01790.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds13	NO26G01790.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds14	NO26G01790.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds15	NO26G01790.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds16	NO26G01790.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds17	NO26G01790.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds18	NO26G01790.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds19	NO26G01790.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01790.1.cds20	NO26G01790.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr26:598248..604789+
coding sequence from alignment at chr26:598248..604789+

mRNA sequence

>NO26G01790.1 ID=NO26G01790.1|Name=NO26G01790.1|organism=Nannochloropsis oceanica|type=mRNA|length=3281bp
ACTATGAAGACAGACACAGGCGACATTTACCGGGGGGGAAAGGCAGGTGG
AGAGCTCTCACAGGTGTCAAGTATGGAGCTTGTCCTCTGTTCCTTGTGGT
TGTCGCGCCGCTACTTTGGAGGAGGAAGGGAGCAGGGACGACAGGGAGGA
GGACATAAGACTGTCGACTGGAAAGGCTTGCTGAAGGGCGTGCACGAAGG
CGGATTGTCCACCGAGGCCGTACGTGGGCGGTTAGCCATCGAGCTGGACG
CGGCATACATGGTGTGGGATGCTGAGAGGAGGCGATTGGAGAGGCAATGG
AAGAAGATCAACGCCAAAGCCCAGCGGCTTATTCCCTCCCCCCTTTCCGA
CGACGGTCATGACGGCAAGAAAGAGGCGCCAGGGGTCCACAAACAATCCG
CCACGAAAGGCCTCGTCGTTGGTAATGGACGCAGTAGCATGCTCCCCCTC
CTCCCTCTGGCGGAACGCGGACATGACGACGAGGAAACCGAACCTCGCGA
TAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGTCTATCAAGAACAACAA
CAAGAAGAAGAAGAAGGAGGGGGGAGGAAGGAGGGGTTCTGCACGAGGAG
GAGGAGGAGGAGGACGACCAGGGTGAAGTGTACTGGAAGGAGCGGCTGAG
AGTCGCCCTCTTCAGCTTTCATAGAGACGGGAATGCCCTGCTGGAGACGA
AGCTGGCCCACATTGCAGAGGCCGCCGCCTTCAAGGGTCGACTGCACCAT
ATTCTCCCACCACCAGGAGCAGCACCAACAGCCGCAGTAGCAGTCGCAGA
AGCAGCAGCAGCAGCAGTACGACAAACACCTTTCTCAACAGCCGCAGAAG
CAGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGACGGCGCCTCCTCTATC
TTCCTCCTTCTTGACACACACCCCCTCCTCCTCTCCTCCCCTCTTTCTTC
CCTCCCCTCCTCCTCCTCCTCCTCCTCTTTGACAGCCGAAGCACTCATAA
CGGCAGGGGAGGAAACGTTCGCGTCGTTATTTTGTAACGGCAACCGAGAA
ACGGCGCGCCTCCTCCTCTTCTCACACCAGGGCATGACCACCACCACCAG
CAGCAACAGCAGCAGCAGCAACAACAGTAGCCTTCCCCTCCGTCTTGGCG
CCCTCCTTGTCCTCCTCGCCTGGTGTCTCTGGGACTGCCTCTTCGATGAC
TCCCTCGGGAAAAGCATCTTCCACGACCCTTCATTTAAGATTTTCCGGGG
GCTGAGCAACGTCATCCTCCTCCTCTGGGGCCTCGGCGTCGTTCTCTTCG
TCATCAACGCTGCAGGGATCGATTATAGGAGAATCCTGGGTCTCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCCTCCCGTCCTCCCTCCCTCCCTCCTCCTCCCTCCTCGTCCACGCCC
TCTTCCTCCATGCCTCCAACCTCTCCATCGCATTCCTGGCCGTCTTCCTC
TGCTTCTACAAAGCGCTGCGCGGCGTCTTCCTTCAGCAGCACGGGGCACT
ACCCGTGCCTCTCGCTCACTCTTTTCCAGTCCTCTTATTCGTTGGGATGA
ATGTGTGGTTCTTCAGACGTTTAAATCCACGGCTTAAAATTCAGCGTCTC
CTTCGCAACACCATCCTGGCTCCCTTCGCTCCCGTCTCCTTCACCGATGC
CCTCGTTGGGGATGTACTCACGTCCGTCGTTCGGGTCCTCGTCGATTTGG
CATTTGCTGCTCTCTACTCCCTCCGCTGGGTCGCCACCTTCCTTTCCAAG
AGCAACAGGAGCGAGCTTCTCGCTCAGGATCCCATCTCTCATACCGCCTT
CTTCTCCTCCCTCCTCCTCCCCTTCCTCACATTCTCCCCTCTCTGGTGGC
GCCTCCATCAAAACTTCCGCAAGGCCTGGGAAGAGGCTACTCGCTTCCCC
TACTACGCGAACGCCTTGAAATACGCCCTCTCCCTCACAGTGTCCTCCTT
CGTCACGTTCAATCCCATGCTCAAAACCTCCGGCTGGTGGCGCTTGTCCT
TCGTCCTCTCCACTCTCTATCAAATCTACTGGGATGTGAGCAGGGATTGG
AGCCTGCTTCAATGGAACGACCTCACCGGGAGATTCGTCTTCCGCCCTCG
CCTCCTCCTCTTTAAGTCCCGTCGCCCTTACTGCCTTGCCATGGCCGTCA
ATTGTGTGCTACGGTTCTCCTGGTCCTTGACCATCGTCCCCGAAGGCATC
GGCCTTTTTTCCCACAAGGACGCACAGCTTCACCTCTCCTCCTTTTTGGC
CGCCGCCGAAATTGTCCGTCGGGGCCTCTGGTGTGTCCTACGCCTCGAGC
ACGAGCACCTGTCCCTCTATCGTTCCTCCGTCCCTCTCTCCCTCTCTCTT
TCCTCAAGGGAAGAAGAGGAAGAGGACGAGGCTGAGGACGAAAGGAAGGG
AGGAGTAGACGGGAGGGTATTAGATGATTTGGAGATGGAACGCCTTCTGA
CGGACGAGGAGAAACGGCGCATCGAAGCATCTCCCCACCCTAAACACCGA
GCTTTCCAGATCAACGGCGCCACCATCGATCCCTTTGCTCTCATCACGGC
CGAGAAACGAAGACAAATTTTGTATGAGTGTGTAAGCATGACGCTCGCCC
TCTTCTTCCTTATCAGCCTGGGCGCGCGGAGCAAAGAGTAGGGTAGACTT
TCCCTCCTCCTCTCCCTCGCTTCTTCTGTCTATATGCTGTGAGTGCGTGG
ACAGGACATTTGTGTCCTTCTTCTCTTTTTTAATCCGGACGGTAACAGCC
AGGAAAAGGCTTCCCAGAGAGAAAGAGAGGGAGGGAGGTAGATTGGAAGG
GAGGGACGAGAAATCGTCTTGTTTCAATAAAAATAGTAAAACAGAAACCC
TTGGATTAGACCGCGATCAGGCCGGCAATGAAGTACAATGATCAGTCACG
AACAATATATATTGAAGCTCAGTGGGAAAATTGAGGAAATTCGATTTGTG
AGAACAAGACCGTGGTGCTGGCAGTGACAAGTGGAGCCGAATTGCCTGCC
AGTAAAAACAGAAGAGAAGAAAGCATCTCTCTGGGTGGTTGCACTGACAT
GTGCATCGAGGCCTTTGTTTCAGCTCTCTTTCCCCTTTCAGCGGGCTGTG
GGCTATACTCTTGCGTAAGTCGTCGACACCGAACGTTGCGGACGAACAGC
GATAGAGAATCAAATGCTCAAAAACTTTGAATTTGCAATCGTGGGATCTG
TCGCAGATTTGTATTTTCCTTTTTTTTGCTG

protein sequence of NO26G01790.1

>NO26G01790.1-protein ID=NO26G01790.1-protein|Name=NO26G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=896bp
MKTDTGDIYRGGKAGGELSQVSSMELVLCSLWLSRRYFGGGREQGRQGGG
HKTVDWKGLLKGVHEGGLSTEAVRGRLAIELDAAYMVWDAERRRLERQWK
KINAKAQRLIPSPLSDDGHDGKKEAPGVHKQSATKGLVVGNGRSSMLPLL
PLAERGHDDEETEPRDSNSSSSSSSSSLSRTTTRRRRRRGEEGGVLHEEE
EEEDDQGEVYWKERLRVALFSFHRDGNALLETKLAHIAEAAAFKGRLHHI
LPPPGAAPTAAVAVAEAAAAAVRQTPFSTAAEAAAAAAAAAAADGASSIF
LLLDTHPLLLSSPLSSLPSSSSSSSLTAEALITAGEETFASLFCNGNRET
ARLLLFSHQGMTTTTSSNSSSSNNSSLPLRLGALLVLLAWCLWDCLFDDS
LGKSIFHDPSFKIFRGLSNVILLLWGLGVVLFVINAAGIDYRRILGLSSS
SSSSSSSSSSSSSSSSSLPSSLPPSSSLLVHALFLHASNLSIAFLAVFLC
FYKALRGVFLQQHGALPVPLAHSFPVLLFVGMNVWFFRRLNPRLKIQRLL
RNTILAPFAPVSFTDALVGDVLTSVVRVLVDLAFAALYSLRWVATFLSKS
NRSELLAQDPISHTAFFSSLLLPFLTFSPLWWRLHQNFRKAWEEATRFPY
YANALKYALSLTVSSFVTFNPMLKTSGWWRLSFVLSTLYQIYWDVSRDWS
LLQWNDLTGRFVFRPRLLLFKSRRPYCLAMAVNCVLRFSWSLTIVPEGIG
LFSHKDAQLHLSSFLAAAEIVRRGLWCVLRLEHEHLSLYRSSVPLSLSLS
SREEEEEDEAEDERKGGVDGRVLDDLEMERLLTDEEKRRIEASPHPKHRA
FQINGATIDPFALITAEKRRQILYECVSMTLALFFLISLGARSKE*

mRNA from alignment at chr26:598248..604789+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO26G01790.1 ID=NO26G01790.1|Name=NO26G01790.1|organism=Nannochloropsis oceanica|type=mRNA|length=6542bp|location=Sequence derived from alignment at chr26:598248..604789+ (Nannochloropsis oceanica)
ACTATGAAGACAGACACAGGCGACATTTACCGGGGGGGAAAGGCAGGTGG
AGAGCTCTCACAGGTGTCAAGTATGGAGCTTGTCCTCTGTTCCTTGTGGT
TGTCGCGCCGCTACTTTGGAGGAGGAAGGGAGCAGGGACGACAGGGAGGA
GGACATAAGACTGTCGACTGGAAAGGCTTGCTGAAGGGCGTGCACGAAGG
TAGCTTTGAAAGTGTGGAGAAGAGGAAAGGATGGGAAAGATATAGAGATG
CGAAGGGTATATTTTTATCGGAAGGGAATGAAAAAGGGAACTCGTCGGCT
TCATTTCCACACACACACCTGTACCAATCCTCCCTTCCTACCTCCCTCCC
TCCCTCCCTCCTTCCCTCCATGACACAGGCGGATTGTCCACCGAGGCCGT
ACGTGGGCGGTTAGCCATCGAGCTGGACGCGGCATACATGGTGTGGGATG
CTGAGAGGAGGCGATTGGAGAGGCAATGGAAGAAGGTGGGTTGCTAGGCT
GGAGGGAGGGAGGGAGGGAGAGTAGAAGGAGGCCTTGATGCATGGCTCAG
CAATAAGAAGGAAAGGAGAAAGTGCTTGAGTGATCAGTGGTATCATTAAC
CCCTCCTTGCTCTCTCCCTCCCTCCCCCCCTTCCTTGCTAGATCAACGCC
AAAGCCCAGCGGCTTATTCCCTCCCCCCTTTCCGACGACGGTCATGACGG
CAAGAAAGAGGCGCCAGGGGTCCACAAACAATCCGCCACGAAAGGCCTCG
TCGTTGGTAATGGACGCAGTAGCATGGTACGCCCTCCTCCGCTTCCTCCC
TCCCGCTTCCCTCCCCCCCTTCGTTCTATCCTTGCACACGTTCTCCGTCT
TCTGTCCCCCCTCCCTCCCACTCTCCCTTGCTCACCTCTTTTCCCTCACT
GCATTCGTTCAACGTCCTTCACTTCCCCTCTCCCTCCCTTCCTCCCTCCT
TCCCTTCCTTCAGCTCCCCCTCCTCCCTCTGGCGGAACGCGGACATGACG
ACGAGGAAACCGAACCTCGCGATAGCAACAGCAGCAGCAGCAGCAGCAGC
AGCAGTCTATCAAGAACAACAACAAGAAGAAGAAGAAGGAGGGGGGAGGA
AGGAGGGGTTCTGCACGAGGAGGAGGAGGAGGAGGACGACCAGGGTGAAG
TGTACTGGAAGGAGCGGCTGAGAGTCGCCCTCTTCAGCTTTCATAGAGAC
GGGAATGCCCTGCTGGAGACGAAGGTGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAAGAAGAGGGGGAAAGTGTACCGGTCCATTACCCTCA
GTCTTCTTATACTCCCCTCCCTCCCTCCCTCGTTTGTCAGCTGGCCCACA
TTGCAGAGGCCGCCGCCTTCAAGGGTCGACTGCACCATATTCTCCCACCA
CCAGGAGCAGCACCAACAGCCGCAGTAGCAGTCGCAGAAGCAGCAGCAGC
AGCAGTACGACAAACACCTTTCTCAACAGCCGCAGAAGCAGCCGCAGCAG
CAGCAGCAGCAGCAGCAGCAGACGGCGCCTCCTCTATCTTCCTCCTTCTT
GACACACACCCCCTCCTCCTCTCCTCCCCTCTTTCTTCCCTCCCCTCCTC
CTCCTCCTCCTCCTCTTTGACAGCCGAAGCACTCATAACGGCAGGGGAGG
AAACGTTCGCGTCGTTATTTTGTAACGGCAACCGAGAAACGGCGCGCCTC
CTCCTCTTCTCACACCAGGGCATGGTACGTCCTCTCCCTCCCTCCCTCCT
TCCCTCACCTCCTTTTTTCCGCGTGCGTTTCATCATGAAAAAGTAGTACA
TCCATTCCCATCCTTCCTCCCGCCCGCCCTCCCTCCTTCTCTCTTTTCCT
CCTCCCCCACCGTCAGACCACCACCACCAGCAGCAACAGCAGCAGCAGCA
ACAACAGTAGCCTTCCCCTCCGTCTTGGCGCCCTCCTTGTCCTCCTCGCC
TGGTGTCTCTGGGACTGCCTCTTCGATGACTCCCTCGGGAAAAGCATCTT
CCACGACCCTTCATTTAAGGTGGAACACCATCCCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCACCTCCTTTTTTCCGCGTGCGTTTCAGCATGAAA
AAGTAGTACATCTATTCCTATCCTTCCTCCCGCCCGCCCTCCCGCCCGCC
CTCCCGCCCTCCCTCCTTTGATAACAACCAATCGGGCTCATCCGCATCCT
CTCCCTCCCTCCCTCCATCCCTAGATTTTCCGGGGGCTGAGCAACGTCAT
CCTCCTCCTCTGGGGCCTCGGCGTCGTTCTCTTCGTCATCAACGCTGCAG
GGATCGATTATAGGTAGCTCCCGCCTCCCTCCCTCCCTCCCTCCCTCCCT
TTCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCGCTCTCCCTCCCTCTTT
CACGCCTTCGGTTCCCTACCGCCCTCCCTCCCTTTCCCGCCCTCCCTCCC
TCCCGCCCTCCCTTTCTCCGCAATCACCGCAGGAGAATCCTGGGTCTCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCCTCCCGTCCTCCCTCCCTCCCTCCTCCTCCCTCCTCGTCCAC
GCCCTCTTCCTCCATGCCTCCAACCTCTCCATCGCATTCCTGGCCGTCTT
CCTCTGCTTCTACAAAGCGCTGCGGTAAGCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCTCTTGTTCCACCAAGCAGCATCTCCC
TTCAGCAGCAAACCTCATCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
GCTAGCGGCGTCTTCCTTCAGCAGCACGGGGCACTACCCGTGCCTCTCGC
TCACTCTTTTCCAGTCCTCTTATTCGTTGGGATGAATGTGTGGTTCTTCA
GACGGTACGCTTGGTTCCCTCCCTCCCTCCCCTCCCTCCCTCTCTCCCAC
CCTCCCTCCCCATCGCTGCATTATATCCCGTCCTCTTGATCGTGGATGGA
ATCAAATTGTGGCTCTTTGAATATTGGAGGGAGGGGAGGAGGGAGGGAGG
GAGAGAAGGAGGGAGGGAAGGAGGGAGGGAGGGAAAGAGTGTAGTCGGTA
CACGAACAGGGAGCTCACTCACTGCGGGCTCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCCAGTTTAAATCCACGGCTTAAAAT
TCAGCGTCTCCTTCGCAACACCATCCTGGCTCCCTTCGGTAAGCATCGTC
TCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCTCCCC
TCCCACCCTCCCTCCCTCCCACCCTCCCTCCAGCTCCCGTCTCCTTCACC
GATGCCCTCGTTGGGGATGTACTCACGTCCGTCGTTCGGGTCCTCGTCGA
TTTGGCATTTGCTGCTCTCTACTCCCTCCGCTGGGTCGCCACCTTCCTTT
CCAAGAGCAACAGGTGCCCTCCCTCCCTCCCTCCCTCCCTCCACACCCTT
CTTGCCACTCACAAACTCTCCCTCCCCTCCTCCCTCCCCCCTCCCTCCCT
AACTCAGGAGCGAGCTTCTCGCTCAGGATCCCATCTCTCATACCGCCTTC
TTCTCCTCCCTCCTCCTCCCCTTCCTCACATTCTCCCCTCTCTGGTAAGC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCATTTCCTCCCTTGCAACATCATACTAAATGCGTCTTCTC
GTCTGCCTTTCTTTTCACCCTCTCCCTCCCTCCCTCCCTCCCTCCCTTCA
GGTGGCGCCTCCATCAAAACTTCCGCAAGGCCTGGGAAGAGGCTACTCGG
TAGGTCACTCCCTCCTTTATCCTCGATCTTTCTCCCTTAAACTTGCTCTC
TAGGATTTTGTTCCTCCTCCCCTCCTCCTCTGCTTCCTTCCCTTTCTCGT
TCTCTTCCTACCTTCCTCCCTCTCGTACTCTCTTACTCTCTTTCGTGTCA
CCTCACCCTCCCCCCCTCCCTCCCCCCCAGCTTCCCCTACTACGCGAACG
CCTTGAAATACGCCCTCTCCCTCACAGTGTCCTCCTTCGTCACGTTCAAT
CCCATGGTACGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCTGGTCTGGTTCTCCCCCTTTTCCCCTCTCTCTCCCTTCATCCATT
CATTTTTTTCGCCTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTC
CTAGCTCAAAACCTCCGGCTGGTGGCGCTTGTCCTTCGTCCTCTCCACTC
TCTATCAAATCTACTGGGATGTGAGCAGGGATTGGAGCCTGCTTCAATGG
TACGTACCTCCCTCCCTCCCTTCCTCCCTCCCTCCTGCCTACAGAATAGG
AGTGGGGGGAGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGACGGACTGGAGTGGTGTGGGAGGATGAGGTCTCGCTGGTTAAT
CTAAAGCCATCACCTACCCCTCTCTCCCTCCCTCCCTCCCTCCCCCCTCC
TGTACAGGAACGACCTCACCGGGAGATTCGTCTTCCGCCCTCGCCTCCTC
CTCTTTAAGTCCCGTCGCCCTTACTGCCTTGCCATGGCCGTCAATTGTGT
GCTACGGTAAGCCAGCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCCCT
CCCTCCCTCCCTCCAATTTCATGCCTCTCAACCCCTCCCTCCCTCTCTTT
TTCCCCTTTCTGTCAGATTCTTCCTTCCACTCTACACCTCTTATCTCCCC
TCTCCCTCCCTCCCTCTTTCCCTCCGTCCTTCGTCCCTCCTTTCTCTTAG
GTTCTCCTGGTCCTTGACCATCGTCCCCGAAGGCATCGGCCTTTTTTCCC
ACAAGGACGCACAGGTGCCCTCCCTCCCTCCCGCCTCCCTCCCTCCCTCC
CTCCCTCCTTCCTTTCTTCCCTCCCTCCCTCCCTCTCTTCTATCAGCTTC
TCGTTCCCTTTTGCCGGTGGGAAACCCTACGCTTTTTTCCGCACCACCAC
CCACCCCTCCCCCTTCCCCTCCATCCTCCCGCATTCCATTCCCTTCCTTC
TGTTTTAATTTTAGTTCCCCCCTCCCTCTCCTTCCCTCACCATCCTTCCT
TCCCTTTTTCTTCCCTAGCTTCACCTCTCCTCCTTTTTGGCCGCCGCCGA
AATTGTCCGTCGGGGCCTCTGGTGTGTCCTACGCCTCGAGCACGAGCACC
TGTCCCTCTATCGTTCCTCCGTCCCTCTCTCCCTCTCTCTTTCCTCAAGG
GAAGAAGAGGAAGAGGACGAGGCTGAGGACGAAAGGAAGGGAGGAGTAGA
CGGGAGGGTATTAGATGATTTGGAGGTACGTCTTAAGTGTCTTGAGGCCC
GTAAGTTTCTTTTCTGTGCCCTTCTTTTCTCCCTCCCTTCTCTATTTTCT
CCTCCTTTCTCCTTTCGCTCACCTTCCTTCCCTCCTTCCCTTCCTCCCTC
CCTCCTCTAGATGGAACGCCTTCTGACGGACGAGGAGAAACGGCGCATCG
AAGCATCTCCCCACCCTAAACACCGAGCTTTCCAGGTAGGCAGGTAGTGA
GGGAGGGAGGGAGGGGCAGAGGGGGGAAGGAATAAAAGATTAGGGCCATG
ACTGGTGATTTGCCAAAAAGATAGATGGAGGGAAACATTCGGCCTTCTTC
TCTCCCTTCCTCCCTCTCTTTCTCCATCCCTCCCTCCTTCAAGGTCTCCT
TCAAGGTCAATCGAGACCAAAATCAAATGCACAAATATGTATCTCACCTT
AACCCCCCCTACTCGCTCAGATCAACGGCGCCACCATCGATCCCTTTGCT
CTCATCACGGCCGAGAAACGAAGACAAATTTTGTATGAGTGTGTAAGCAT
GACGCTCGCCCTCTTCTTCCTTATCAGCCTGGGCGCGCGGAGCAAAGAGT
AGGGTAGACTTTCCCTCCTCCTCTCCCTCGCTTCTTCTGTCTATATGCTG
TGAGTGCGTGGACAGGACATTTGTGTCCTTCTTCTCTTTTTTAATCCGGA
CGGTAACAGCCAGGAAAAGGCTTCCCAGAGAGAAAGAGAGGGAGGGAGGT
AGATTGGAAGGGAGGGACGAGAAATCGTCTTGTTTCAATAAAAATAGTAA
AACAGAAACCCTTGGATTAGACCGCGATCAGGCCGGCAATGAAGTACAAT
GATCAGTCACGAACAATATATATTGAAGCTCAGTGGGAAAATTGAGGAAA
TTCGATTTGTGAGAACAAGACCGTGGTGCTGGCAGTGACAAGTGGAGCCG
AATTGCCTGCCAGTAAAAACAGAAGAGAAGAAAGCATCTCTCTGGGTGGT
TGCACTGACATGTGCATCGAGGCCTTTGTTTCAGCTCTCTTTCCCCTTTC
AGCGGGCTGTGGGCTATACTCTTGCGTAAGTCGTCGACACCGAACGTTGC
GGACGAACAGCGATAGAGAATCAAATGCTCAAAAACTTTGAATTTGCAAT
CGTGGGATCTGTCGCAGATTTGTATTTTCCTTTTTTTTGCTG

Coding sequence (CDS) from alignment at chr26:598248..604789+

>NO26G01790.1 ID=NO26G01790.1|Name=NO26G01790.1|organism=Nannochloropsis oceanica|type=CDS|length=2688bp|location=Sequence derived from alignment at chr26:598248..604789+ (Nannochloropsis oceanica)
ATGAAGACAGACACAGGCGACATTTACCGGGGGGGAAAGGCAGGTGGAGA
GCTCTCACAGGTGTCAAGTATGGAGCTTGTCCTCTGTTCCTTGTGGTTGT
CGCGCCGCTACTTTGGAGGAGGAAGGGAGCAGGGACGACAGGGAGGAGGA
CATAAGACTGTCGACTGGAAAGGCTTGCTGAAGGGCGTGCACGAAGGCGG
ATTGTCCACCGAGGCCGTACGTGGGCGGTTAGCCATCGAGCTGGACGCGG
CATACATGGTGTGGGATGCTGAGAGGAGGCGATTGGAGAGGCAATGGAAG
AAGATCAACGCCAAAGCCCAGCGGCTTATTCCCTCCCCCCTTTCCGACGA
CGGTCATGACGGCAAGAAAGAGGCGCCAGGGGTCCACAAACAATCCGCCA
CGAAAGGCCTCGTCGTTGGTAATGGACGCAGTAGCATGCTCCCCCTCCTC
CCTCTGGCGGAACGCGGACATGACGACGAGGAAACCGAACCTCGCGATAG
CAACAGCAGCAGCAGCAGCAGCAGCAGCAGTCTATCAAGAACAACAACAA
GAAGAAGAAGAAGGAGGGGGGAGGAAGGAGGGGTTCTGCACGAGGAGGAG
GAGGAGGAGGACGACCAGGGTGAAGTGTACTGGAAGGAGCGGCTGAGAGT
CGCCCTCTTCAGCTTTCATAGAGACGGGAATGCCCTGCTGGAGACGAAGC
TGGCCCACATTGCAGAGGCCGCCGCCTTCAAGGGTCGACTGCACCATATT
CTCCCACCACCAGGAGCAGCACCAACAGCCGCAGTAGCAGTCGCAGAAGC
AGCAGCAGCAGCAGTACGACAAACACCTTTCTCAACAGCCGCAGAAGCAG
CCGCAGCAGCAGCAGCAGCAGCAGCAGCAGACGGCGCCTCCTCTATCTTC
CTCCTTCTTGACACACACCCCCTCCTCCTCTCCTCCCCTCTTTCTTCCCT
CCCCTCCTCCTCCTCCTCCTCCTCTTTGACAGCCGAAGCACTCATAACGG
CAGGGGAGGAAACGTTCGCGTCGTTATTTTGTAACGGCAACCGAGAAACG
GCGCGCCTCCTCCTCTTCTCACACCAGGGCATGACCACCACCACCAGCAG
CAACAGCAGCAGCAGCAACAACAGTAGCCTTCCCCTCCGTCTTGGCGCCC
TCCTTGTCCTCCTCGCCTGGTGTCTCTGGGACTGCCTCTTCGATGACTCC
CTCGGGAAAAGCATCTTCCACGACCCTTCATTTAAGATTTTCCGGGGGCT
GAGCAACGTCATCCTCCTCCTCTGGGGCCTCGGCGTCGTTCTCTTCGTCA
TCAACGCTGCAGGGATCGATTATAGGAGAATCCTGGGTCTCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CCTCCCGTCCTCCCTCCCTCCCTCCTCCTCCCTCCTCGTCCACGCCCTCT
TCCTCCATGCCTCCAACCTCTCCATCGCATTCCTGGCCGTCTTCCTCTGC
TTCTACAAAGCGCTGCGCGGCGTCTTCCTTCAGCAGCACGGGGCACTACC
CGTGCCTCTCGCTCACTCTTTTCCAGTCCTCTTATTCGTTGGGATGAATG
TGTGGTTCTTCAGACGTTTAAATCCACGGCTTAAAATTCAGCGTCTCCTT
CGCAACACCATCCTGGCTCCCTTCGCTCCCGTCTCCTTCACCGATGCCCT
CGTTGGGGATGTACTCACGTCCGTCGTTCGGGTCCTCGTCGATTTGGCAT
TTGCTGCTCTCTACTCCCTCCGCTGGGTCGCCACCTTCCTTTCCAAGAGC
AACAGGAGCGAGCTTCTCGCTCAGGATCCCATCTCTCATACCGCCTTCTT
CTCCTCCCTCCTCCTCCCCTTCCTCACATTCTCCCCTCTCTGGTGGCGCC
TCCATCAAAACTTCCGCAAGGCCTGGGAAGAGGCTACTCGCTTCCCCTAC
TACGCGAACGCCTTGAAATACGCCCTCTCCCTCACAGTGTCCTCCTTCGT
CACGTTCAATCCCATGCTCAAAACCTCCGGCTGGTGGCGCTTGTCCTTCG
TCCTCTCCACTCTCTATCAAATCTACTGGGATGTGAGCAGGGATTGGAGC
CTGCTTCAATGGAACGACCTCACCGGGAGATTCGTCTTCCGCCCTCGCCT
CCTCCTCTTTAAGTCCCGTCGCCCTTACTGCCTTGCCATGGCCGTCAATT
GTGTGCTACGGTTCTCCTGGTCCTTGACCATCGTCCCCGAAGGCATCGGC
CTTTTTTCCCACAAGGACGCACAGCTTCACCTCTCCTCCTTTTTGGCCGC
CGCCGAAATTGTCCGTCGGGGCCTCTGGTGTGTCCTACGCCTCGAGCACG
AGCACCTGTCCCTCTATCGTTCCTCCGTCCCTCTCTCCCTCTCTCTTTCC
TCAAGGGAAGAAGAGGAAGAGGACGAGGCTGAGGACGAAAGGAAGGGAGG
AGTAGACGGGAGGGTATTAGATGATTTGGAGATGGAACGCCTTCTGACGG
ACGAGGAGAAACGGCGCATCGAAGCATCTCCCCACCCTAAACACCGAGCT
TTCCAGATCAACGGCGCCACCATCGATCCCTTTGCTCTCATCACGGCCGA
GAAACGAAGACAAATTTTGTATGAGTGTGTAAGCATGACGCTCGCCCTCT
TCTTCCTTATCAGCCTGGGCGCGCGGAGCAAAGAGTAG

Synonyms

Publications