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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr26 | genome | chr26:469913..473794 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO26G01460.2 vs.
Match: AQT19709.1 (type two diacylglycerol acyltransferase [Nannochloropsis oceanica]) HSP 1 Score: 676.8 bits (1745), Expect = 3.600e-191 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MTPQADITSKTTPNLKTAASSPSKTSPAPSVQYKAANGKVITVAMAEQDDGNMGIFRECFAMVTMGIIMSWYYIVVILSLLCLVGICIFPAWRAVAATVFVLMWSAALLPLDYQGWDAFCNSFIFRLWRDYFHYEYVLEEMIDPNKRYLFAEMPHGIFPWGEVISISITKQLFPGSRVGSIGASVIFLLPGLRHFFAWIGCRPASPENIKKIFEDGQDCAVTVGGVAEMFLVGGDKERLYLKKHKGFVREAMKNGADLVPVFCFGNSKLFNVVGESSRVSMGLMKRLSRRIKASVLIFYGRLFLPIPIRHPLLFVVGKPLPVVHKAEPTKEEIAATH 338
MTPQADITSKTTPNLKTAASSPSKTSPAPSVQYKAANGKVITVAMAEQDDGNMGIFRECFAMVTMGIIMSWYYIVVILSLLCLVGICIFPAWRAVAATVFVLMWSAALLPLDYQGWDAFCNSFIFRLWRDYFHYEYVLEEMIDPNKRYLFAEMPHGIFPWGEVISISITKQLFPGSRVGSIGASVIFLLPGLRHFFAWIGCRPASPENIKKIFEDGQDCAVTVGGVAEMFLVGGDKERLYLKKHKGFVREAMKNGADLVPVFCFGNSKLFNVVGESSRVSMGLMKRLSRRIKASVLIFYGRLFLPIPIRHPLLFVVGKPLPVVHKAEPTKEEIAATH
Sbjct: 1 MTPQADITSKTTPNLKTAASSPSKTSPAPSVQYKAANGKVITVAMAEQDDGNMGIFRECFAMVTMGIIMSWYYIVVILSLLCLVGICIFPAWRAVAATVFVLMWSAALLPLDYQGWDAFCNSFIFRLWRDYFHYEYVLEEMIDPNKRYLFAEMPHGIFPWGEVISISITKQLFPGSRVGSIGASVIFLLPGLRHFFAWIGCRPASPENIKKIFEDGQDCAVTVGGVAEMFLVGGDKERLYLKKHKGFVREAMKNGADLVPVFCFGNSKLFNVVGESSRVSMGLMKRLSRRIKASVLIFYGRLFLPIPIRHPLLFVVGKPLPVVHKAEPTKEEIAATH 337
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO26G01460.2 ID=NO26G01460.2|Name=NO26G01460.2|organism=Nannochloropsis oceanica|type=mRNA|length=3287bp CGTTTTACCTTTGTTGAGAGGGCTTTGCTTGGCCTTGGAGTCGTTGGAGA CCCGGTGCTCGGCGATTCATGACGCGGCCAACCGACACGCCTGCCGCTGA CTTGATCGAGACCCATCCCAACGCGCGTTCCCATCTTTTCCTAGAGCCTT GGTAACAAAAAACACTGGCGATAGTGCATGATTCATCCTTATAGTCTCAT CCACGTGAATAAATGCAGGTCGTGGTCATTGTCACATGCATGCACCGCGT ACCATCGCTCGCTCGTCCATTGCCTGCTTGGCAGAAGAAAGAATCGAATC GGTACACGTCGCTGGACGTCCACTTAGTTAGAGAGAACAAAATGGAACAA ATAAATACAGCTTGCCTGGTACTTGAGAGAGAGAGAAAGAGGCCGAGCGA GCCAGTACATCCAACACGCCATCCACACCAGCAAACCTCCTCTCCATCTT CCTTCCCCATCCCCACTACCTTACGCAGAGAGACAAGGAGGCAACCAGCA TTGGTTTCAACATGACGCCGCAAGCCGACATCACCAGCAAGACGACACCC AACCTCAAGACGGCTGCGTCATCCCCCTCCAAGACCTCGCCCGCCCCCTC CGTTCAATACAAGGCGGCGAATGGCAAGGTGATCACGGTGGCCATGGCCG AGCAAGACGACGGGAACATGGGCATTTTCCGCGAGTGTTTTGCAATGGTG ACAATGGGCATAATTATGTCGTGGTATTACATCGTCGTCATTCTCTCCCT CCTCTGCTTGGTGGGGATCTGCATCTTCCCTGCCTGGCGGGCGGTAGCGG CCACGGTTTTTGTGCTTATGTGGAGTGCGGCGCTATTGCCGCTTGACTAC CAGGGATGGGATGCTTTCTGCAACTCCTTTATCTTCAGGCTGTGGCGGGA CTACTTCCACTATGAATACGTCCTGGAGGAGATGATCGACCCAAACAAGC GCTACCTCTTTGCTGAGATGCCTCACGGTATCTTCCCCTGGGGAGAGGTG ATTTCCATTTCGATCACCAAACAGCTTTTTCCCGGGAGCCGCGTAGGCTC CATCGGTGCGAGTGTCATCTTCCTCCTTCCCGGTCTCAGGCACTTCTTCG CTTGGATCGGGTGTCGGCCCGCGAGCCCAGAGAACATCAAAAAGATTTTT GAGGATGGGCAGGACTGTGCCGTGACGGTGGGGGGGGTCGCCGAGATGTT TCTAGTCGGAGGAGACAAGGAACGACTGTACCTGAAGAAGCACAAGGGTT TCGTTCGAGAAGCCATGAAGAATGGGGCGGACCTGGTTCCTGTCTTCTGC TTCGGCAACAGCAAACTGTTCAATGTGGTGGGGGAGAGCAGTCGGGTTTC TATGGGCCTGATGAAGCGCCTCTCAAGGAGGATTAAGGCCAGCGTCCTCA TCTTTTACGGCCGTCTCTTCCTGCCCATTCCGATTCGACACCCGCTCTTG TTCGTGGTGGGGAAGCCCCTGCCGGTCGTGCACAAGGCAGAGCCGACCAA GGAGGAGATCGCGGCAACGCACGGTACGTCCTTGCTCTTCCTTCCCCATT TGACTGAGTGATTCCACACATCCCGATTCTACGCCCATGGCCTTTGGTAG TGCCGGTCCCTGTGGTAGAAGCGTGACACGTCGTTCAAATTTCCTCCCTC TGTTTCCCCCTTTCTCCCTCCATTCTTAGGTGGCTGCTTCCCTGTGAAAT ATCCATCGTGAAGATGTCAGTCACGTCCTTCCTCTTAACTCTCCTTTTCC ATCTGCCCCCTTCCCTATCTTCCCCTTCCCCCCTCTGCAGCACTCTTTTG CGAGAAGGTCGAGGAGCTTTACTACAAATACAGGCCGGAGTGGGAGACGC GCCCGTTGTCCATTGAGTAAAATACGTGGAGGGAGAGAGCAAGGGATATG TGCTTGAGGAAACTTGTAATTGTGGTTGTGCTTATGAGTGTGATTTTGTG ATTGTGATTTTGTGTGTGCGTGTGTGTGATCGGTTGTGATTGTGATGATA TATATATATATGTGTGTGTGTGATTTGTTGCCATTTTGTGTATGTGTCTG TGTGTGTTTGTGCCGATATGTGTGTCTGTTCCTGTCTGTGTGGCTTTATA GCTGTGTGTGCCGGTCTGTGTTGGTGTGTGCCCGTGTCTCTATGCGTCTC CGTGTGTCTCCGTGTGTCTCCGTGTGTCTCCGTGTGTCTCCGTGTGGTGT ATGTACGATTACTTCTGGTGCTTGTGCAATTCCGTTCGAAAGCAATTACG GTCAGAGAAGATAATAAGACGAGGCTGACGTACGATCGGAAGAATGACAA ATAAAATTTAAACAATTTTGAGAATTTGTCATTGTCTAAGGAATACATGT TGCAAAATTTGAAATTATTTTCGATTATGTCCCCTCGCCCTTTAAGTGAG AAACATTCAAGCGATGGGTTGACACCGAGTTGGCAGCGAGGTAGCAATCG CTCAATATAAGAGAAGAAAAAGGCATCCCTGCAGTTGCCATGCTGGAGCT GATCTCATTGGTGTATCGATCTTTCAGCTCTCCATGTCTGTTGGAGGGGT AGGAAGAAACACAGCGCACACCCCGTCGAACTGGAGTGTCATCTGTGCGC ACCTTCAGAGACAAAGGAACGTTTTAGATTTTTAGAGTCCAAGAAGTCAA ACACTAGAGAGATTTTGGTGCTGGGTACATAACGCGATGAAGGTTCTGAA ACACTTGACTTCAGTGATGGGGGATCAGACCTGGAAGCTCTCGCTACCAT GCTAGAGAAACATGAACACTTGAAAAACTGTGCGGGACTGAAGGAGTGAC CACTCAGACACTAGCCTTACAACATCTTCCCAAACTATTGTCAAGCCCAA ACGCCACGGGAGTTGGCGGTCTTAAATCGTCATATTTGAGCAGGCGGCGA TTTAAAGCGGCGCACCCATTTTTAAAATATTGATTACTACTCTCTTCAAA ATGCTATCCCCTTCACGGACCGCACTAGAGAGAGGGGCCATCAAGAAATT TCGCTTTTCATCTCATGCAAGGTGATGAGCACCTGAATGTGCTGAGCTTT TGCTTCACCCATTTTTCTATTATTCATATTTTATGAGAGTATCCGAAGAC AGACCAGGCAGCCCGGATGCCAAAGGAAAACATTGAAATCTGAAACGGCT CTGGGAGGAAGACATTACCAGTATGGTACAATTATTTTATCATCTGAACA CACATAGGATTTATGACATGGACATGCCCGAAACGCCCACCAACGCATGA ACTCCTATCTTTGACAGACCAGAACATGCGCTTACAC back to topprotein sequence of NO26G01460.2 >NO26G01460.2-protein ID=NO26G01460.2-protein|Name=NO26G01460.2|organism=Nannochloropsis oceanica|type=polypeptide|length=350bp MTPQADITSKTTPNLKTAASSPSKTSPAPSVQYKAANGKVITVAMAEQDD GNMGIFRECFAMVTMGIIMSWYYIVVILSLLCLVGICIFPAWRAVAATVF VLMWSAALLPLDYQGWDAFCNSFIFRLWRDYFHYEYVLEEMIDPNKRYLF AEMPHGIFPWGEVISISITKQLFPGSRVGSIGASVIFLLPGLRHFFAWIG CRPASPENIKKIFEDGQDCAVTVGGVAEMFLVGGDKERLYLKKHKGFVRE AMKNGADLVPVFCFGNSKLFNVVGESSRVSMGLMKRLSRRIKASVLIFYG RLFLPIPIRHPLLFVVGKPLPVVHKAEPTKEEIAATHGTSLLFLPHLTE* back to topmRNA from alignment at chr26:469913..473794- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO26G01460.2 ID=NO26G01460.2|Name=NO26G01460.2|organism=Nannochloropsis oceanica|type=mRNA|length=3882bp|location=Sequence derived from alignment at chr26:469913..473794- (Nannochloropsis oceanica) CGTTTTACCTTTGTTGAGAGGGCTTTGCTTGGCCTTGGAGTCGTTGGAGA
CCCGGTGCTCGGCGATTCATGACGCGGCCAACCGACACGCCTGCCGCTGA
CTTGATCGAGACCCATCCCAACGCGCGTTCCCATCTTTTCCTAGAGCCTT
GGTAACAAAAAACACTGGCGATAGTGCATGATTCATCCTTATAGTCTCAT
CCACGTGAATAAATGCAGGTCGTGGTCATTGTCACATGCATGCACCGCGT
ACCATCGCTCGCTCGTCCATTGCCTGCTTGGCAGAAGAAAGAATCGAATC
GGTACACGTCGCTGGACGTCCACTTAGTTAGAGAGAACAAAATGGAACAA
ATAAATACAGCTTGCCTGGTACTTGAGAGAGAGAGAAAGAGGCCGAGCGA
GCCAGTACATCCAACACGCCATCCACACCAGCAAACCTCCTCTCCATCTT
CCTTCCCCATCCCCACTACCTTACGCAGAGAGACAAGGAGGCAACCAGCA
TTGGTTTCAACATGACGCCGCAAGCCGACATCACCAGCAAGACGACACCC
AACCTCAAGACGGCTGCGTCATCCCCCTCCAAGACCTCGCCCGCCCCCTC
CGTTCAATACAAGGCGGCGAATGGCAAGGTGATCACGGTGGCCATGGCCG
AGCAAGACGACGGGAACATGGGCATTTTCCGCGAGTGTTTTGCAATGGTG
ACAATGGGCATAATTATGTCGTGGTATTACATCGTCGTCATTCTCTCCCT
CCTCTGCTTGGTGGGGATCTGCATCTTCCCTGCCTGGCGGGCGGTAGCGG
CCACGGTTTTTGTGCTTATGTGGAGTGCGGCGCTATTGCCGCTTGACTAC
CAGGTGCGTGGACCCCGCATTACTGCTGCTGCTGCTGCTGCTACTGCTGC
TGCTGCTTATCTATTGTACTATTGATCTATGTACAACTTCATCTCCTCGT
CCTTTTTTGTTCTGTCATGCCTGATAAAAAATACTGGTCTCACACACCCC
TTTCATCCACTCTCCCTCCCTCCCTCTCCGCTTCCCTCCCTCTCGTAGGG
ATGGGATGCTTTCTGCAACTCCTTTATCTTCAGGCTGTGGCGGGACTACT
TCCACTATGAATACGTCCTGGAGGAGATGATCGACCCAAACAAGCGCTAC
CTCTTTGCTGAGATGCCTCACGGTATCTTCCCCTGGGGAGGTAGGGCGGG
GAGGGAGGGAGGGAAAGGGGGGGACAGAGGGGTGCCAGAAATGTTTGACT
CAATAACCGCTGGGTGTCTTGCTTAGATGCATTTACGCACTTGAAACACA
TGAGTCATCAGACTGGATGTTTTCCTAGGAAGGTGCTTTCGTCCATCTCC
AAACCCTCCCTTGCTTCCATCCTCCCCACCTCCCATTGCGCCATCCATTC
ACCCACCCCTTCCTCTCTTCCCCCTTTCCCTTCAATCTTTCATAGAGGTG
ATTTCCATTTCGATCACCAAACAGCTTTTTCCCGGGAGCCGCGTAGGCTC
CATCGGTGCGAGTGTCATCTTCCTCCTTCCCGGTCTCAGGCACTTCTTCG
CTTGGATCGGGTGTCGGCCCGCGAGCCCAGAGAACATCAAAAAGATTTTT
GAGGATGGGCAGGACTGTGCCGTGACGGTGGGGGGGGTCGCCGAGATGTT
TCTAGTCGGAGGAGACAAGGAACGGTAAGAGGGGGCAGAGGGAGGAGGGG
TGAAGAGGGGGGAAGGGAGGCGTGGACGTGTCGCTTTGGTCTCATGATGC
TTTACTGCCCTTCTCCCTTCTTTCCTGAATTCCCTCTCTCCCTCCATTTT
TTCTCTCCGCCCTCTCCAGACTGTACCTGAAGAAGCACAAGGGTTTCGTT
CGAGAAGCCATGAAGAATGGGGCGGACCTGGTTCCTGTCTTCTGCTTCGG
CAACAGCAAACTGTTCAATGTGGTGGGGGAGAGCAGTCGGGTTTCTATGG
GCCTGATGAAGCGCCTCTCAAGGAGGATTAAGGCCAGCGTCCTCATCTTT
TACGGCCGTCTCTTCCTGCCCATTCCGATTCGACACCCGCTCTTGTTCGT
GGTGGGGAAGCCCCTGCCGGTCGTGCACAAGGCAGAGCCGACCAAGGAGG
AGATCGCGGCAACGCACGGTACGTCCTTGCTCTTCCTTCCCCATTTGACT
GAGTGATTCCACACATCCCGATTCTACGCCCATGGCCTTTGGTAGTGCCG
GTCCCTGTGGTAGAAGCGTGACACGTCGTTCAAATTTCCTCCCTCTGTTT
CCCCCTTTCTCCCTCCATTCTTAGGTGGCTGCTTCCCTGTGAAATATCCA
TCGTGAAGATGTCAGTCACGTCCTTCCTCTTAACTCTCCTTTTCCATCTG
CCCCCTTCCCTATCTTCCCCTTCCCCCCTCTGCAGCACTCTTTTGCGAGA
AGGTCGAGGAGCTTTACTACAAATACAGGCCGGAGTGGGAGACGCGCCCG
TTGTCCATTGAGTAAAATACGTGGAGGGAGAGAGCAAGGGATATGTGCTT
GAGGAAACTTGTAATTGTGGTTGTGCTTATGAGTGTGATTTTGTGATTGT
GATTTTGTGTGTGCGTGTGTGTGATCGGTTGTGATTGTGATGATATATAT
ATATATGTGTGTGTGTGATTTGTTGCCATTTTGTGTATGTGTCTGTGTGT
GTTTGTGCCGATATGTGTGTCTGTTCCTGTCTGTGTGGCTTTATAGCTGT
GTGTGCCGGTCTGTGTTGGTGTGTGCCCGTGTCTCTATGCGTCTCCGTGT
GTCTCCGTGTGTCTCCGTGTGTCTCCGTGTGTCTCCGTGTGGTGTATGTA
CGATTACTTCTGGTGCTTGTGCAATTCCGTTCGAAAGCAATTACGGTCAG
AGAAGATAATAAGACGAGGCTGACGTACGATCGGAAGAATGACAAATAAA
ATTTAAACAATTTTGAGAATTTGTCATTGTCTAAGGAATACATGTTGCAA
AATTTGAAATTATTTTCGATTATGTCCCCTCGCCCTTTAAGTGAGAAACA
TTCAAGCGATGGGTTGACACCGAGTTGGCAGCGAGGTAGCAATCGCTCAA
TATAAGAGAAGAAAAAGGCATCCCTGCAGTTGCCATGCTGGAGCTGATCT
CATTGGTGTATCGATCTTTCAGCTCTCCATGTCTGTTGGAGGGGTAGGAA
GAAACACAGCGCACACCCCGTCGAACTGGAGTGTCATCTGTGCGCACCTT
CAGAGACAAAGGAACGTTTTAGATTTTTAGAGTCCAAGAAGTCAAACACT
AGAGAGATTTTGGTGCTGGGTACATAACGCGATGAAGGTTCTGAAACACT
TGACTTCAGTGATGGGGGATCAGACCTGGAAGCTCTCGCTACCATGCTAG
AGAAACATGAACACTTGAAAAACTGTGCGGGACTGAAGGAGTGACCACTC
AGACACTAGCCTTACAACATCTTCCCAAACTATTGTCAAGCCCAAACGCC
ACGGGAGTTGGCGGTCTTAAATCGTCATATTTGAGCAGGCGGCGATTTAA
AGCGGCGCACCCATTTTTAAAATATTGATTACTACTCTCTTCAAAATGCT
ATCCCCTTCACGGACCGCACTAGAGAGAGGGGCCATCAAGAAATTTCGCT
TTTCATCTCATGCAAGGTGATGAGCACCTGAATGTGCTGAGCTTTTGCTT
CACCCATTTTTCTATTATTCATATTTTATGAGAGTATCCGAAGACAGACC
AGGCAGCCCGGATGCCAAAGGAAAACATTGAAATCTGAAACGGCTCTGGG
AGGAAGACATTACCAGTATGGTACAATTATTTTATCATCTGAACACACAT
AGGATTTATGACATGGACATGCCCGAAACGCCCACCAACGCATGAACTCC
TATCTTTGACAGACCAGAACATGCGCTTACAC back to topCoding sequence (CDS) from alignment at chr26:469913..473794- >NO26G01460.2 ID=NO26G01460.2|Name=NO26G01460.2|organism=Nannochloropsis oceanica|type=CDS|length=1050bp|location=Sequence derived from alignment at chr26:469913..473794- (Nannochloropsis oceanica) ATGACGCCGCAAGCCGACATCACCAGCAAGACGACACCCAACCTCAAGAC GGCTGCGTCATCCCCCTCCAAGACCTCGCCCGCCCCCTCCGTTCAATACA AGGCGGCGAATGGCAAGGTGATCACGGTGGCCATGGCCGAGCAAGACGAC GGGAACATGGGCATTTTCCGCGAGTGTTTTGCAATGGTGACAATGGGCAT AATTATGTCGTGGTATTACATCGTCGTCATTCTCTCCCTCCTCTGCTTGG TGGGGATCTGCATCTTCCCTGCCTGGCGGGCGGTAGCGGCCACGGTTTTT GTGCTTATGTGGAGTGCGGCGCTATTGCCGCTTGACTACCAGGGATGGGA TGCTTTCTGCAACTCCTTTATCTTCAGGCTGTGGCGGGACTACTTCCACT ATGAATACGTCCTGGAGGAGATGATCGACCCAAACAAGCGCTACCTCTTT GCTGAGATGCCTCACGGTATCTTCCCCTGGGGAGAGGTGATTTCCATTTC GATCACCAAACAGCTTTTTCCCGGGAGCCGCGTAGGCTCCATCGGTGCGA GTGTCATCTTCCTCCTTCCCGGTCTCAGGCACTTCTTCGCTTGGATCGGG TGTCGGCCCGCGAGCCCAGAGAACATCAAAAAGATTTTTGAGGATGGGCA GGACTGTGCCGTGACGGTGGGGGGGGTCGCCGAGATGTTTCTAGTCGGAG GAGACAAGGAACGACTGTACCTGAAGAAGCACAAGGGTTTCGTTCGAGAA GCCATGAAGAATGGGGCGGACCTGGTTCCTGTCTTCTGCTTCGGCAACAG CAAACTGTTCAATGTGGTGGGGGAGAGCAGTCGGGTTTCTATGGGCCTGA TGAAGCGCCTCTCAAGGAGGATTAAGGCCAGCGTCCTCATCTTTTACGGC CGTCTCTTCCTGCCCATTCCGATTCGACACCCGCTCTTGTTCGTGGTGGG GAAGCCCCTGCCGGTCGTGCACAAGGCAGAGCCGACCAAGGAGGAGATCG CGGCAACGCACGGTACGTCCTTGCTCTTCCTTCCCCATTTGACTGAGTGA back to top
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