NO26G00360.3, NO26G00360.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO26G00360.3
Unique Name	NO26G00360.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3012
Alignment location	chr26:110914..116143 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr26	genome	chr26:110914..116143 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO26G00360.3 vs.
Match: OQS06676.1 (cleft lip and palate transmembrane family protein [Thraustotheca clavata])

HSP 1 Score: 297.7 bits (761), Expect = 8.700e-77
Identity = 197/610 (32.30%), Postives = 305/610 (50.00%), Query Frame = 0

Query:   53 YLNTTTLAVCIFFLYIFWCGRGMHRIMYPLAHLPPLKEGEATLDPLWPEGRAFDVLCYLSDSPEDPHLQAQHPLWQAKGLRYGWGKEERKEGEVEEGVKEVKLRLVTELQPAEEEEGNAEGKSGGAETKNKKKKEEEEKEVLIPDWFWRRVRRGKDVYLHVFVTRSPGLVNVTSARAGEGGMEEGGEEGTLAPQVELQGHDGYSPLHGVVPLLKRQVYEAKPPKRRLLSG--------EEIRAPEMLKEGGHG----------LYWKPEVAVRLVTDFTLYPIKYLPPQIADHLDIVQVIDKARRVKSYRYRPPVHADEIGLTSDKYIPLNSSLASLPLAINYSPLSVARWQMMTVLESSMQTQKGWGLEETDIDDVRRLITDTNVYLLLLTAIASLLHLLFEFLAFQSDIAFWRKNKSLRGLSIRTLVMELVSQSIILLYLIDADSSLLITLPSAFGVLVQIWKVQKATGASLQRSKGGYWPTLVCTRLTTEGKIEGKEEKGKTDINKAEQEKNDSNAAAPGTQKETMDLDRVAIHHLTLVLAPLALGFAARSLLQEEYTGWYSWALSTLTSAVYTFGFILMTPQLYINYRLKSVSHLPWRFLCFRCVS 645
            + + T +++ +F  Y  +     + IM+P+  L    + E  L PLW EG+  D +CY+S  P+                   W   +     V           V E +    +  + E       +     ++   K +  P   W+ +R    VYLHV +T++                        ++P      +D    LH   PL+K           RLL+         EEI  P  L     G           YWKP +A+RLVT F  YP+  +PP +  ++ +  V         ++Y P +  DE+GLTS+K +PLN S+ +LPL ++Y P+S ARWQMM    S+++ QK  G  E D+D +R LI DTN YLL +T   SLLH+LF++LAF+SDI+FW++N+SL G+S+R++V+   SQ II  YL++ +++LLI +PS   +++Q+WK+ +AT   +  S      TL+  + T                            +AP    ET  +D +A+ +++  L+PL +G+A  SLL +++TGWYS+ L +LT  VYTFGFI+MTPQL+INY+LKSV+HLPWRFL +R ++
Sbjct:    6 FCSFTCVSILVFSAYFLFTVYQFYTIMFPVFLLA---DDEPYLGPLWKEGQLLDGVCYVSSKPK-------------------WADSDFTNSRVV---------FVGEFRELSFDWKDNERTIEFNVSLLPSIEDNSTKALTNP--LWKLIRNNGSVYLHVHLTQNG-----------------------MSPDPRQHNYDKLRTLHHATPLIKYAERRNLKNATRLLASYIPSTSKDEEITEPIHLPGEPTGEDPALTAPIVSYWKPHMAIRLVTSFKRYPLSEVPPLVFHNIRMENVDGH------WKYLPVMFVDEMGLTSEKLMPLNRSITTLPLKLSYEPMSYARWQMMLTFGSALRQQKDLGFGEDDLDQMRSLIADTNPYLLAVTMTVSLLHMLFDWLAFKSDISFWQENQSLVGISVRSMVITFFSQIIIFFYLLEQETTLLILVPSGISIVIQLWKIYRATAPKVSFSS----QTLLSLKFT---------------------------RSAP-ESSETDAIDLMAMRYMSYALSPLLVGYAIYSLLYKDHTGWYSYVLGSLTGTVYTFGFIMMTPQLFINYKLKSVAHLPWRFLIYRALN 521

The following BLAST results are available for this feature:

BLAST of NO26G00360.3 vs.

BLAST of NO26G00360.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OQS06676.1	8.700e-77	32.30	cleft lip and palate transmembrane family protein ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO26G00360	NO26G00360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO26G00360.3	NO26G00360.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO26G00360.3.cds1	NO26G00360.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds2	NO26G00360.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds3	NO26G00360.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds4	NO26G00360.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds5	NO26G00360.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds6	NO26G00360.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds7	NO26G00360.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds8	NO26G00360.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds9	NO26G00360.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds10	NO26G00360.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds11	NO26G00360.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds12	NO26G00360.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds13	NO26G00360.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds14	NO26G00360.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G00360.3.cds15	NO26G00360.3.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr26:110914..116143+
coding sequence from alignment at chr26:110914..116143+

mRNA sequence

>NO26G00360.3 ID=NO26G00360.3|Name=NO26G00360.3|organism=Nannochloropsis oceanica|type=mRNA|length=3012bp
CCCGCACACCCGCACACAGCGTCTTATAATAAACAAAGACAGGCACCCAT
GACAAAAAGGCAAGGGTCACTTTCCTTCAAGGCGACCCCGGGACAGGCGC
ACGAACCAGCATCGACCTCCTCCTCCGCCGCCTCCAGACCTGTTACAGCA
TCCACTCCTGTCGACATCGACCCAGAATTCCTCCCCAAGAAAGGCTGGAC
CTCGTACCTGAACACCACCACCCTAGCCGTTTGTATCTTCTTTCTCTACA
TCTTTTGGTGTGGTCGGGGGATGCATCGTATCATGTACCCTCTCGCTCAC
CTGCCTCCGTTGAAGGAGGGGGAGGCCACCCTCGACCCGCTCTGGCCGGA
GGGGAGGGCATTCGACGTTTTGTGCTACCTAAGCGATTCGCCTGAAGACC
CTCATCTCCAAGCTCAACACCCTCTCTGGCAAGCTAAGGGACTTAGATAC
GGCTGGGGTAAGGAGGAAAGGAAGGAGGGCGAGGTGGAGGAAGGGGTCAA
GGAGGTCAAGTTGCGGCTGGTCACTGAGTTGCAGCCGGCAGAGGAGGAAG
AAGGGAATGCTGAAGGGAAGAGCGGAGGGGCAGAGACAAAGAATAAGAAG
AAAAAGGAGGAGGAGGAAAAGGAGGTGCTGATCCCGGACTGGTTCTGGCG
TCGGGTCCGTCGAGGAAAGGATGTCTACCTCCACGTGTTTGTCACTCGTT
CGCCTGGCCTGGTCAACGTCACCAGTGCGAGGGCGGGGGAGGGAGGGATG
GAGGAAGGGGGGGAGGAGGGGACGCTTGCTCCACAGGTAGAGCTGCAGGG
TCATGACGGTTACAGTCCTCTGCATGGAGTCGTGCCACTGCTGAAGCGGC
AGGTGTATGAAGCCAAGCCGCCCAAGCGTCGGCTGCTCTCGGGGGAAGAG
ATCAGGGCGCCCGAAATGTTGAAGGAAGGAGGCCACGGCCTGTACTGGAA
GCCCGAGGTGGCCGTGCGCCTGGTCACAGACTTCACCCTCTACCCCATCA
AATACCTCCCGCCTCAAATCGCCGACCACCTCGACATCGTCCAAGTGATT
GACAAGGCACGAAGGGTCAAGTCCTACAGATACCGGCCCCCCGTCCACGC
GGATGAGATCGGACTTACGAGTGACAAGTACATCCCTCTCAACTCCTCCC
TCGCCTCTCTCCCCTTGGCGATAAATTACTCCCCCTTGTCCGTGGCACGG
TGGCAAATGATGACTGTGCTAGAATCCTCCATGCAGACCCAGAAAGGCTG
GGGGTTGGAAGAGACGGATATTGACGATGTGCGCCGCCTTATCACTGACA
CCAATGTATACCTGTTGCTGCTCACGGCAATAGCCTCGCTTCTGCATCTT
CTTTTCGAGTTCCTGGCCTTCCAAAGTGATATTGCCTTCTGGCGCAAGAA
TAAAAGTCTTCGCGGGCTCAGCATCAGGACACTGGTCATGGAGCTAGTCT
CACAGAGCATCATCCTCCTCTACCTGATCGACGCCGATTCTTCCCTCCTC
ATCACCCTTCCGTCTGCCTTTGGTGTGCTCGTCCAGATCTGGAAAGTGCA
GAAAGCAACAGGCGCGTCTCTTCAGCGCAGTAAAGGCGGATATTGGCCTA
CATTGGTATGCACGCGCTTGACTACCGAGGGAAAGATTGAAGGGAAGGAG
GAGAAGGGAAAAACAGACATCAACAAGGCCGAGCAGGAGAAGAATGATTC
CAATGCTGCTGCTCCTGGGACCCAGAAGGAAACGATGGACTTGGACAGGG
TCGCAATTCATCACCTTACCCTTGTCCTCGCCCCTTTAGCCCTGGGTTTT
GCTGCACGTTCCTTGCTTCAAGAAGAATATACGGGGTGGTACAGCTGGGC
GCTCTCTACTCTGACCTCTGCCGTTTACACTTTCGGCTTCATCCTTATGA
CTCCTCAACTCTACATCAATTATCGACTAAAAAGCGTCAGCCACCTGCCT
TGGCGCTTTCTCTGCTTCCGGTGCGTGTCTTTTGCCCTCCTTCCCTCCCT
CTCTCCACCCCTGCACCCTCCTAGCCGATCGATCGCTTCCCTCCCTGTGT
GACGGACGGCGTTTCATGAATGGCCCAACCCCTCGCTTTCCTTTTTTCCT
TCTTTCCCTAGGTTTGTCAACACCTTCATCGATGACCTCTTCGCGTTCAT
CATCAAGATGCCCACTATGCACCGTATTTCCTGTTTCCGCGATGACGTTG
TATTTCTGATCTACTTGTATCAAAGGTGGATGTATCCTGTCGATAAAAGC
AGACAAATAGACGCGGAAGACTGTGCGGGAAGCGGATGATGAATAAGTGA
CAGAGTGGTCTACAATCATATATAAAAGACAAATAGGGAACAAATTATGC
AAGTGCCAGTTTCTTGTTGACTCGCTAAGATTCCAGATATCACATACTTT
GCGTGGCGTAGTGGGCGAGATCGAATCTCGCGGTGGGACCCATATATTTC
CCCCCGTCAAATAAAAATGATTTACGCTACGCACCGTAACTCGCGAACAT
CATCGAGCTTGAAGGAGCAACTTATGCGATCAAATAGGCGCAGCGACACT
CATGACGTCACCGACCTTGAAGAAGCAACCTATGCGATCAAATAGGCGCA
ATGACACGCAACCGTAACTCGCGACGTAATCGAACTTGAAGAAGCAACCT
ATGCGATCAAAGAGGATCAGTGACACTGATGCCGGCAGCTATCCCGTCAT
GCGGGGCTGGCTTATTTTGGTGCTCACATTATGGTGGAAGTAAATGCCAT
CATATCGGTGGCAAGGCTCGTAATGGTGTTTAAAACCCCAAAAAAGTAAA
AAGAGCAAAATATGTGCATAACTTTCTGTATTGTCCGTAAGAAAGTGGCC
GCGTGATTAGATGTGCTTACGCTAACGTTTGGTGGCTACGTCCTGGAGGC
GTTCCCGGTTTTCCCGCAGAGATAGACGTCATTTTTCACAATAAGGTTTC
CCGGCCATGTTGAAGCGGATGATCGATTTGTAGAGTTTCTTCAAAGAGTG
TGTAGTCTTCAG

protein sequence of NO26G00360.3

>NO26G00360.3-protein ID=NO26G00360.3-protein|Name=NO26G00360.3|organism=Nannochloropsis oceanica|type=polypeptide|length=668bp
MTKRQGSLSFKATPGQAHEPASTSSSAASRPVTASTPVDIDPEFLPKKGW
TSYLNTTTLAVCIFFLYIFWCGRGMHRIMYPLAHLPPLKEGEATLDPLWP
EGRAFDVLCYLSDSPEDPHLQAQHPLWQAKGLRYGWGKEERKEGEVEEGV
KEVKLRLVTELQPAEEEEGNAEGKSGGAETKNKKKKEEEEKEVLIPDWFW
RRVRRGKDVYLHVFVTRSPGLVNVTSARAGEGGMEEGGEEGTLAPQVELQ
GHDGYSPLHGVVPLLKRQVYEAKPPKRRLLSGEEIRAPEMLKEGGHGLYW
KPEVAVRLVTDFTLYPIKYLPPQIADHLDIVQVIDKARRVKSYRYRPPVH
ADEIGLTSDKYIPLNSSLASLPLAINYSPLSVARWQMMTVLESSMQTQKG
WGLEETDIDDVRRLITDTNVYLLLLTAIASLLHLLFEFLAFQSDIAFWRK
NKSLRGLSIRTLVMELVSQSIILLYLIDADSSLLITLPSAFGVLVQIWKV
QKATGASLQRSKGGYWPTLVCTRLTTEGKIEGKEEKGKTDINKAEQEKND
SNAAAPGTQKETMDLDRVAIHHLTLVLAPLALGFAARSLLQEEYTGWYSW
ALSTLTSAVYTFGFILMTPQLYINYRLKSVSHLPWRFLCFRCVSFALLPS
LSPPLHPPSRSIASLPV*

mRNA from alignment at chr26:110914..116143+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO26G00360.3 ID=NO26G00360.3|Name=NO26G00360.3|organism=Nannochloropsis oceanica|type=mRNA|length=5230bp|location=Sequence derived from alignment at chr26:110914..116143+ (Nannochloropsis oceanica)
CCCGCACACCCGCACACAGCGTCTTATAATAAACAAAGACAGGCACCCAT
GACAAAAAGGCAAGGGTCACTTTCCTTCAAGGCGACCCCGGGACAGGCGC
ACGAACCAGCATCGACCTCCTCCTCCGCCGCCTCCAGACCTGTTACAGCA
TCCACTCCTGTCGACATCGACCCAGAATTCCTCCCCAAGAAAGGTATATT
TACCTATAACTCTCTTATTATGACTGCGCGCTGCGTATGTACGCTATATT
CATACTCCTTTCACCCCACTTTTGCTCATTGTGAGGGAAGCACGCACGGC
ATCATCCCTCCTCTCCCTCCCCTCCCTCCCTCTCTCCCTCTCTTCCTCCC
CTCCGTCGTTCACTCTTAGGCTGGACCTCGTACCTGAACACCACCACCCT
AGCCGTTTGTATCTTCTTTCTCTACATCTTTTGGTGTGGTCGGGGGATGC
ATCGTATCATGTACCCTCTCGCTCACCTGCCTCCGTTGAAGGAGGGGGAG
GCCACCCTCGACCCGCTCTGGCCGGAGGGGAGGGCATTCGACGTTTTGTG
CTACCTAAGGTGGGAAGAGAGAAAGAAGGGAGGCCTTATACGCATAGAGG
ACGATTAGGTATCTCTCTGCAGCTTGGATGTTTTATCACCACGGGCATCT
TGCCATCACGCCATCTCACCCTCCTTCCCTCCCTCTCTCCCTACCCCCCT
CCATGCCTTCCTCCTCCCCTACAGCGATTCGCCTGAAGACCCTCATCTCC
AAGCTCAACACCCTCTCTGGCAAGCTAAGGGACTTAGATACGGCTGGGGT
AAGGAGGAAAGGAAGGAGGGCGAGGTGGAGGAAGGGGTCAAGGAGGTCAA
GTTGCGGCTGGTCACTGAGTTGCAGCCGGCAGAGGAGGAAGAAGGGAATG
CTGAAGGGAAGAGCGGAGGGGCAGAGACAAAGAATAAGAAGAAAAAGGAG
GAGGAGGAAAAGGAGGTGCTGATCCCGGACTGGTTCTGGCGTCGGGTCCG
TCGAGGAAAGGTATGTCTCCGAGGGAGGGAGGAAGAGAGGGGGGAAGGGA
AGGACGGCGTGCATTAAAAGTATCCCTAGTCATGTCTTGCGCTGATCCCC
CTCCTCCTGCCCTGCTTCCAACCCCAGGATGTCTACCTCCACGTGTTTGT
CACTCGTTCGCCTGGCCTGGTCAACGTCACCAGTGCGAGGGCGGGGGAGG
GAGGGATGGAGGAAGGGGGGGAGGAGGGGACGCTTGCTCCACAGGTAGAG
CTGCAGGGTCATGACGGTTACAGTCCTCTGCATGGAGTCGTGCCACTGCT
GAAGCGGCAGGTGAGGGGGGATGGAGGATGGGACGAAGAGAAGGAGAAAA
TGGAACTTGACTACTGACTGCCGATGGGAAGGGAGTGATGGAAGGAAGAG
AGAGGGAATAAGGCCTGACTTCTTGCCAATAGACTTGGACTCATATTATC
CTCCCTTTCTCCCTTCCTTCCTCTCCAGGTGTATGAAGCCAAGCCGCCCA
AGCGTCGGCTGCTCTCGGGGGAAGAGATCAGGGCGCCCGAAATGTTGAAG
GAAGGAGGTAAGGAGGGAGGGAGAGAGGGAGGAAGGTCTGCGAACAATCA
TGGACACCAAAAGGGTTCACTCAATCCTCCTTCCTTCCCTCTTTCCCTCC
CGCCCTCCCTCCCTTCCTCCCCAGGCCACGGCCTGTACTGGAAGCCCGAG
GTGGCCGTGCGCCTGGTCACAGACTTCACCCTCTACCCCATCAAATACCT
CCCGCCTCAAATCGCCGACCACCTCGACATCGTCCAAGTGATTGACAAGG
CACGAAGGGTCAAGGTACAGCCCTCCCTCCTCCCCACCCCCCTTTCTATG
GCAGAAACTGACAAACCATACTTTCTTCTCACCCTCCCTCCATCCCTCCC
TCCCTCCCCCCCTCCCTCTCCCCAGTCCTACAGATACCGGCCCCCCGTCC
ACGCGGATGAGATCGGACTTACGAGTGACAAGTACATCCCTCTCAACTCC
TCCCTCGCCTCTCTCCCCTTGGCGGTACCTTCCTCCGTTTCTCCCTCCCT
CCCTCTTTCCCTCCCTCCCTCCCTCCCTCCCTACTCATTTCCTGTCAGTC
CGCGCTAAGGATGAGAATACATTGCCGCGACTTTTCCCTTGCCCTTCTTT
CACTCACTGTGCGTCCTCCCTTGATTCCTTCCTTCCCTCGTTCCCTCCCT
CCCGTTCTCCATCGTGCTTAATTATTCACACTCCCTCCCTCCCTCCCTCC
CTCCCTCCTTCCCTTCCTCCCTTCATGAAGATAAATTACTCCCCCTTGTC
CGTGGCACGGTGGCAAATGATGACTGTGCTAGGTAGGCAGGAAGCGAAGG
AAGGAGGGAACGAGGAAGGGAGGGAGGGAGGGAGGGGATGAGGAAGTGGA
TTTGCCAAAAAAATCGAACAGGGAAACAGGAAAGAACTTGTCTACGATAC
CATTAATTATTCCCTCCCTCCCTCCCTCTCTAGAATCCTCCATGCAGACC
CAGAAAGGCTGGGGGTTGGAAGAGACGGATATTGACGATGTGCGCCGCCT
TATCACTGACACCAATGTATACCTGTTGCTGCTCACGGCAATAGCCTCGC
TGTACGTGTGAGAGGGAGGGAGGGGGGGGGAATGAAGGGGGGAGAAGATG
CGATGCGACGCTCTCACACACTCCAATCGTCCCTCCCTCCCTCGTTCCCT
CCCTCCCTCCCTCAGTCTGCATCTTCTTTTCGAGTTCCTGGCCTTCCAAA
GTGATATTGCCTTCTGGCGCAAGAATAAAAGTCTTCGCGGGCTCAGCATC
AGGACACTGGTCATGGAGCTAGTCTCACAGGTGAAGCCCTCCCTCCCCCC
CTCCCTCCCCCCCTCCCCCCCTCCCTCGATAATGTTTTGGGGGGACATGG
CTGGCGAAGCCCTCACCCTTTCTTCCTCCCTCTCTCCCTTAGAGCATCAT
CCTCCTCTACCTGATCGACGCCGATTCTTCCCTCCTCATCACCCTTCCGT
CTGCCTTTGGTGTGCTCGTCCAGATCTGGAAAGTGCAGAAAGCAACAGGC
GCGTCTCTTCAGCGGTAAGTAGGTCCGTGAAAAGCGAAAGACGGGGCAAG
GAGGGAAGCAGGAATAGGGCACTCATGCAGACTTGCTCATATCCTTGAAA
ACTCAACAGGAAACGCGGATAGTGGTCTACATTGACTGATTCATATCCCT
AATAATGCAACACCGGATTGAGGATTGAATTGACCCGGATTGACCTTTAT
TGACTAAATAAGATAACATCAGTGAAGGTGGATACTATTGGCCTACATTG
ACTTATTCATATCCCTTATAAAATAACAGCAGTAAAGGCGGATATTGGCC
TACATTGGTATGCACGCGCTTGACTACCGAGGGAAAGATTGAAGGGAAGG
AGGAGAAGGGAAAAACAGACATCAACAAGGCCGAGCAGGAGAAGAATGAT
TCCAATGGTAAGAAAAAAAATGGTGGGGAAAGTCCCTGGGACTCTATCGC
CATCTCCTCCCTTCCCTCAATCCCTCCCTCCTCCGCCTCTTCCATTCTTG
TGGCAGCTGCTGCTCCTGGGACCCAGAAGGAAACGATGGACTTGGACAGG
GTCGCAATTCATCACCTTACCCTTGTCCTCGCCCCTTTAGCCCTGGGTTT
TGCTGCACGGTATGGACAGAGGAGTGGTAATGGAGGAAGGGAGGGAAGGA
GGCATCCTTTTCACCAGAGCGTTTTTACAATATGTATCTCATTCCTTACA
TACTCCCTCCTTCCTCCGCGTCCCGACAGTTCCTTGCTTCAAGAAGAATA
TACGGGGTGGTACAGCTGGGCGCTCTCTACTCTGACCTCTGCCGTTTACA
CTTTCGGGTTAGTCAGAAGCCAGGGCAAGAGGGAGGGAGGGAGGGAGGGA
GGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
AAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGA
GGGAGGGAGGGAGGCTCTTTCTATGACCCAACAGTTGCTTTAAACAGTTT
GGGGCCAAGGTTATAACCCTTCCCTTCCTGTTCTCCCCTCCGCCTCTCCC
ACAGCTTCATCCTTATGACTCCTCAACTCTACATCAATTATCGACTAAAA
AGCGTCAGCCACCTGCCTTGGCGCTTTCTCTGCTTCCGGTGCGTGTCTTT
TGCCCTCCTTCCCTCCCTCTCTCCACCCCTGCACCCTCCTAGCCGATCGA
TCGCTTCCCTCCCTGTGTGACGGACGGCGTTTCATGAATGGCCCAACCCC
TCGCTTTCCTTTTTTCCTTCTTTCCCTAGGTTTGTCAACACCTTCATCGA
TGACCTCTTCGCGTTCATCATCAAGATGCCCACTATGCACCGTATTTCCT
GTTTCCGCGATGACGTTGTATTTCTGATCTACTTGTATCAAAGGTGGATG
TATCCTGTCGATAAAAGCAGACAAATAGACGCGGAAGACTGTGCGGGAAG
CGGATGATGAATAAGTGACAGAGTGGTCTACAATCATATATAAAAGACAA
ATAGGGAACAAATTATGCAAGTGCCAGTTTCTTGTTGACTCGCTAAGATT
CCAGATATCACATACTTTGCGTGGCGTAGTGGGCGAGATCGAATCTCGCG
GTGGGACCCATATATTTCCCCCCGTCAAATAAAAATGATTTACGCTACGC
ACCGTAACTCGCGAACATCATCGAGCTTGAAGGAGCAACTTATGCGATCA
AATAGGCGCAGCGACACTCATGACGTCACCGACCTTGAAGAAGCAACCTA
TGCGATCAAATAGGCGCAATGACACGCAACCGTAACTCGCGACGTAATCG
AACTTGAAGAAGCAACCTATGCGATCAAAGAGGATCAGTGACACTGATGC
CGGCAGCTATCCCGTCATGCGGGGCTGGCTTATTTTGGTGCTCACATTAT
GGTGGAAGTAAATGCCATCATATCGGTGGCAAGGCTCGTAATGGTGTTTA
AAACCCCAAAAAAGTAAAAAGAGCAAAATATGTGCATAACTTTCTGTATT
GTCCGTAAGAAAGTGGCCGCGTGATTAGATGTGCTTACGCTAACGTTTGG
TGGCTACGTCCTGGAGGCGTTCCCGGTTTTCCCGCAGAGATAGACGTCAT
TTTTCACAATAAGGTTTCCCGGCCATGTTGAAGCGGATGATCGATTTGTA
GAGTTTCTTCAAAGAGTGTGTAGTCTTCAG

Coding sequence (CDS) from alignment at chr26:110914..116143+

>NO26G00360.3 ID=NO26G00360.3|Name=NO26G00360.3|organism=Nannochloropsis oceanica|type=CDS|length=2004bp|location=Sequence derived from alignment at chr26:110914..116143+ (Nannochloropsis oceanica)
ATGACAAAAAGGCAAGGGTCACTTTCCTTCAAGGCGACCCCGGGACAGGC
GCACGAACCAGCATCGACCTCCTCCTCCGCCGCCTCCAGACCTGTTACAG
CATCCACTCCTGTCGACATCGACCCAGAATTCCTCCCCAAGAAAGGCTGG
ACCTCGTACCTGAACACCACCACCCTAGCCGTTTGTATCTTCTTTCTCTA
CATCTTTTGGTGTGGTCGGGGGATGCATCGTATCATGTACCCTCTCGCTC
ACCTGCCTCCGTTGAAGGAGGGGGAGGCCACCCTCGACCCGCTCTGGCCG
GAGGGGAGGGCATTCGACGTTTTGTGCTACCTAAGCGATTCGCCTGAAGA
CCCTCATCTCCAAGCTCAACACCCTCTCTGGCAAGCTAAGGGACTTAGAT
ACGGCTGGGGTAAGGAGGAAAGGAAGGAGGGCGAGGTGGAGGAAGGGGTC
AAGGAGGTCAAGTTGCGGCTGGTCACTGAGTTGCAGCCGGCAGAGGAGGA
AGAAGGGAATGCTGAAGGGAAGAGCGGAGGGGCAGAGACAAAGAATAAGA
AGAAAAAGGAGGAGGAGGAAAAGGAGGTGCTGATCCCGGACTGGTTCTGG
CGTCGGGTCCGTCGAGGAAAGGATGTCTACCTCCACGTGTTTGTCACTCG
TTCGCCTGGCCTGGTCAACGTCACCAGTGCGAGGGCGGGGGAGGGAGGGA
TGGAGGAAGGGGGGGAGGAGGGGACGCTTGCTCCACAGGTAGAGCTGCAG
GGTCATGACGGTTACAGTCCTCTGCATGGAGTCGTGCCACTGCTGAAGCG
GCAGGTGTATGAAGCCAAGCCGCCCAAGCGTCGGCTGCTCTCGGGGGAAG
AGATCAGGGCGCCCGAAATGTTGAAGGAAGGAGGCCACGGCCTGTACTGG
AAGCCCGAGGTGGCCGTGCGCCTGGTCACAGACTTCACCCTCTACCCCAT
CAAATACCTCCCGCCTCAAATCGCCGACCACCTCGACATCGTCCAAGTGA
TTGACAAGGCACGAAGGGTCAAGTCCTACAGATACCGGCCCCCCGTCCAC
GCGGATGAGATCGGACTTACGAGTGACAAGTACATCCCTCTCAACTCCTC
CCTCGCCTCTCTCCCCTTGGCGATAAATTACTCCCCCTTGTCCGTGGCAC
GGTGGCAAATGATGACTGTGCTAGAATCCTCCATGCAGACCCAGAAAGGC
TGGGGGTTGGAAGAGACGGATATTGACGATGTGCGCCGCCTTATCACTGA
CACCAATGTATACCTGTTGCTGCTCACGGCAATAGCCTCGCTTCTGCATC
TTCTTTTCGAGTTCCTGGCCTTCCAAAGTGATATTGCCTTCTGGCGCAAG
AATAAAAGTCTTCGCGGGCTCAGCATCAGGACACTGGTCATGGAGCTAGT
CTCACAGAGCATCATCCTCCTCTACCTGATCGACGCCGATTCTTCCCTCC
TCATCACCCTTCCGTCTGCCTTTGGTGTGCTCGTCCAGATCTGGAAAGTG
CAGAAAGCAACAGGCGCGTCTCTTCAGCGCAGTAAAGGCGGATATTGGCC
TACATTGGTATGCACGCGCTTGACTACCGAGGGAAAGATTGAAGGGAAGG
AGGAGAAGGGAAAAACAGACATCAACAAGGCCGAGCAGGAGAAGAATGAT
TCCAATGCTGCTGCTCCTGGGACCCAGAAGGAAACGATGGACTTGGACAG
GGTCGCAATTCATCACCTTACCCTTGTCCTCGCCCCTTTAGCCCTGGGTT
TTGCTGCACGTTCCTTGCTTCAAGAAGAATATACGGGGTGGTACAGCTGG
GCGCTCTCTACTCTGACCTCTGCCGTTTACACTTTCGGCTTCATCCTTAT
GACTCCTCAACTCTACATCAATTATCGACTAAAAAGCGTCAGCCACCTGC
CTTGGCGCTTTCTCTGCTTCCGGTGCGTGTCTTTTGCCCTCCTTCCCTCC
CTCTCTCCACCCCTGCACCCTCCTAGCCGATCGATCGCTTCCCTCCCTGT
GTGA

Synonyms

Publications