NO26G00210.2, NO26G00210.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO26G00210.2
Unique NameNO26G00210.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2130
Alignment locationchr26:70437..73459 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:70437..73459 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO26G00210.2 vs.
Match: PSC67348.1 (ATP:cob(I)alamin adenosyltransferase [Micractinium conductrix])

HSP 1 Score: 157.9 bits (398), Expect = 9.700e-35
Identity = 78/129 (60.47%), Postives = 97/129 (75.19%), Query Frame = 0 
Query:  192 IYTRTGDKGTSSLYNGERRPKNDATFDALGATDELNAAIGLAKEHAI-TKSALGGPLCQIQSRLLDLGAAIATPAQTSDDHKRERTRFDPTHVKKVEEWIDELDGRLPPLKNFILPSGGLCSAHLHLAR 320
            IYTRTGD G SSLY+GERRPK+DA F ALG  DE+N+ IGLA+EHA      L G L +IQSRL D+G+A+ATP  +S +HK +RT F   H +++E+WID + G+LPPL  FILPSGGL SA LH+AR
Sbjct:    3 IYTRTGDGGASSLYSGERRPKDDAVFAALGDVDEVNSVIGLAREHARQVDPGLAGQLEEIQSRLFDVGSAVATPLPSSSEHKLQRTVFSTRHTQQLEQWIDGMTGQLPPLTQFILPSGGLASASLHMAR 131
The following BLAST results are available for this feature:
BLAST of NO26G00210.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
PSC67348.19.700e-3560.47ATP:cob(I)alamin adenosyltransferase [Micractinium... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00210NO26G00210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO26G00210.2NO26G00210.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO26G00210.2.cds1NO26G00210.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G00210.2.cds2NO26G00210.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G00210.2.cds3NO26G00210.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G00210.2.cds4NO26G00210.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G00210.2.cds5NO26G00210.2.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G00210.2.cds6NO26G00210.2.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=mRNA|length=2130bp
GGGAACACGTCGCCCTACTATTTCTGCCCCATCTGACACACCTGACAGAC
GCCTGAAAGACTTGTCGGTGGTCCCGTCCGGCCGAGACTGGGGCTGATCG
ACGATTCAGGAAGAGATATGCGCAATGATGTGACGTTAATTATCTATGCG
GTGCATGCTGTCTTTGGTCGTGACTGCGGTAGACAGCGAGGAAACGCTCG
CTTCAGGCCCCTCCTTGTCTCACTCCTGACACACACCCGTGCTTCTCCAC
CTTCAGGCAGTCCACGAACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGA
CCGCGGGGAGATAAACATGCAATGCTGAGCTCGCTGCCTTTCCACACCTT
TCGTCCCGTCCGTCGCATCATCACATCGTCGTTCGCCACCAACACCACCA
GCAGAGGCAGTAGTAGCGTCTGCAGGCAATTTACCACCCACCTGTCCCGT
CGTCCATCCTCGTCTACCACCAGCATGGCACCCTCACTCTTGGCGCTCGC
GGCGTCGGCGGGAAATAGCATAACACTGAGTGAATTAACGCTGCACAAGC
TGCAAGGAGCACAGCTGTTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCG
GCTCATCGCTGGCAGGAATGGCGACGTGGTCTGTCGACCAGTGCAGGGGA
AGGAGCCGCCCGGGACAAGAAGAAGAAGAAGAAGAGTATGATATACACCC
GCACGGGAGATAAAGGCACGTCCAGCCTATATAATGGAGAGCGACGGCCA
AAAAATGACGCGACCTTCGATGCATTGGGTGCAACGGACGAGCTCAACGC
AGCTATTGGCCTCGCGAAGGAGCATGCCATCACCAAGAGCGCCTTGGGAG
GGCCGCTGTGTCAGATCCAATCCCGCCTTCTGGACTTGGGGGCTGCCATC
GCCACGCCCGCGCAGACGTCGGACGACCACAAACGAGAACGGACGCGCTT
CGACCCCACCCACGTCAAGAAGGTGGAGGAGTGGATCGACGAACTCGACG
GCCGCCTCCCTCCTCTCAAGAACTTTATCCTCCCCTCTGGAGGGCTCTGC
AGTGCGCATCTGCACTTAGCCCGGTACGGAGGGAGGGAGGGAATGGCAGG
GAGGGAGAATGGAGGGCGGGAAGGAGATGGAAATGCTCGTGCATGTGTTT
CTTCGCAACTCACTTTCTGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCC
TGTTCCCTTTCCCTTCTGTGTCCTTCAGCACCATTTGCCGACGGGCTGAA
CGAAGCGTCATCCCCCTTGTCAACTCCGAGCAGGTCGATCCTGAGGTACG
CTTGTGCCCTCCCTCCTTCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTT
CGCCTCCTTTTACTTCGAACGCTGTACCATCCGTGTCTTCTTCTCTCTAT
CCATCTACGTGTGCACACACTCTCTCCTTTTCCTTATAATCGCCTATTCC
ACCCTCCTAATTACCCATTCCGCCCTCCTCCTAATCACCCCTTCCTCCTC
CTTATCACCCATTCCACCCTCGTAATCATCTATTCCATCCTTCTAATAAT
CCATTCCACCATCTTAGTCATTCATTCCACCATCCTAATAATCCATCATC
CACGTCTCTCCTCGTCGCCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCC
CACCCCTCCATGGTCCCATCCCTCTCTCCATCCCCATCCATCCCCTCCTT
AGGTGGGCATCTATTTGAACCGCCTGTCGGACTTCTTGTTCGTCGCGGCG
CGGTGGGCGGCCAAGAGCGAGGGCCACGAGGAGACCGTGTGGGTGAAGTA
AAGAGAATGAATGGGGAGAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGG
GAAGCATGCATTTTTCGTTCTCGTCTTTCTCTCTCTGATTCTCTCCATCT
CGCTTATTTAATTTCTTCCCTCTCGTCTTTTTCATCTTTCGGCGAGAAGG
AAGGAGGAGTGGCAGTGAGAAGGAGGAAAGGCAGACGGGAGGGACGGAGG
AAGGGAGGGAGGGAAAATGAACAGCTACGAATTGATCGCTTGGGCGGAAA
GGAGACGATGCGAGGGAGAAGAATACAAATACCACAAGAAAAAAAGAATA
GGAGACAGCGAAGGGAAAAACAAACGTGCG
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protein sequence of NO26G00210.2

>NO26G00210.2-protein ID=NO26G00210.2-protein|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=598bp
MRNDVTLIIYAVHAVFGRDCGRQRGNARFRPLLVSLLTHTRASPPSGSPR
TKRPEGKKRCRPRGDKHAMLSSLPFHTFRPVRRIITSSFATNTTSRGSSS
VCRQFTTHLSRRPSSSTTSMAPSLLALAASAGNSITLSELTLHKLQGAQL
FVGSGVAFLFAAHRWQEWRRGLSTSAGEGAARDKKKKKKSMIYTRTGDKG
TSSLYNGERRPKNDATFDALGATDELNAAIGLAKEHAITKSALGGPLCQI
QSRLLDLGAAIATPAQTSDDHKRERTRFDPTHVKKVEEWIDELDGRLPPL
KNFILPSGGLCSAHLHLARYGGREGMAGRENGGREGDGNARACVSSQLTF
CLVNVPPSLLPCSLSLLCPSAPFADGLNEASSPLSTPSRSILRYACALPP
SLPPSLSHSSLRLLLLRTLYHPCLLLSIHLRVHTLSPFPYNRLFHPPNYP
FRPPPNHPFLLLITHSTLVIIYSILLIIHSTILVIHSTILIIHHPRLSSS
PSSLGSCRQPSHPSMVPSLSPSPSIPSLGGHLFEPPVGLLVRRGAVGGQE
RGPRGDRVGEVKRMNGERTGGREGGRGGKHAFFVLVFLSLILSISLI*
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mRNA from alignment at chr26:70437..73459-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=mRNA|length=3023bp|location=Sequence derived from alignment at chr26:70437..73459- (Nannochloropsis oceanica)
GGGAACACGTCGCCCTACTATTTCTGCCCCATCTGACACACCTGACAGAC
GCCTGAAAGACTTGTCGGTGGTCCCGTCCGGCCGAGACTGGGGCTGATCG
ACGATTCAGGAAGAGATATGCGCAATGATGTGACGTTAATTATCTATGCG
GTGCATGCTGTCTTTGGTCGTGACTGCGGTAGACAGCGAGGAAACGCTCG
CTTCAGGCCCCTCCTTGTCTCACTCCTGACACACACCCGTGCTTCTCCAC
CTTCAGGCAGTCCACGAACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGA
CCGCGGGGAGATAAACATGCAATGCTGAGCTCGCTGCCTTTCCACACCTT
TCGTCCCGTCCGTCGCATCATCACATCGTCGTTCGCCACCAACACCACCA
GCAGAGGCAGTAGTAGCGTCTGCAGGCAATTTACCACCCACCTGTCCCGT
CGTCCATCCTCGTCTACCACCAGCATGGCACCCTCACTCTTGGCGCTCGC
GGCGTCGGCGGGAAATAGCATAACACTGAGTGAATTAACGCTGCACAAGC
TGCAAGGAGCACAGCTGTTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCG
GCTCATCGCTGGCAGGTACGGATGGAAGGTAAAAATGTGGAGGAAGCCTG
GAGAGGGATGCTTCAGTCATATGTTCGAACCAAAGGTTGATGCGTGGACA
CCTTCGATCAGGAATGGCGACGTGGTCTGTCGACCAGTGCAGGGGAAGGA
GCCGCCCGGGACAAGAAGAAGAAGAAGAAGAGTATGATATACACCCGCAC
GGGAGATAAAGGCACGTCCAGCCTATATAATGGAGAGGTAAGGCCGAAAC
GAAGGAAGGCTAGAGCAATGGAGGAAGGGAGAACGAGAAATAAGGGTGGA
CACACGATGTTGACACTTCCATGTTGTCTTACTCCTTCACTTCTCCCTCC
CCTCCCACCCTCCCCTCCCTCCTCTCCCTCCTCTCACTTCCTCCACTCCA
TTCCACCATAGCGACGGCCAAAAAATGACGCGACCTTCGATGCATTGGGT
GCAACGGACGAGCTCAACGCAGCTATTGGCCTCGCGAAGGAGCATGCCAT
GTAAGGAGAGGGGGAGGGAGGGAGGAAGGGAAAGAGTGAGGGAGGGTGGG
AGGGAGGGTGGGAGGGAGAGAGGGAGGGCGAGCAGGTGTGCAGGAGTAGA
CGAGCCTTATAGGAGAGTAGTAGTACACGGCTTGGTGCGCATCAAAGCCA
GCCTTGACTGTACAATGTCGTTTACTCACTCCATTGACTGACTCGACGCA
ACACACAGCACCAAGAGCGCCTTGGGAGGGCCGCTGTGTCAGATCCAATC
CCGCCTTCTGGACTTGGGGGCTGCCATCGCCACGCCCGCGCAGGTGGGAA
GGAGGGAGGGAGGGAGGGAGGGAGGGTGTGGTGTAACTTGAATTTCCGAT
TTTTCACGGCCTGCATCTGTCTTCCGGGTCTGTTGCTTTTCCCGCTCCCT
CTCTACTCCTTCCTTTCCTCTTCCCACTGACGGCCAGTCTATTTCTCCAA
TTCCTATTTGTGTCTATTTCTTTTCCCGCCCCCTCCCCCTCCCTACTACT
GCTCACCCTTTTAAACTTTCGTCCTTCCCTTCGGACAGACGTCGGACGAC
CACAAACGAGAACGGACGCGCTTCGACCCCACCCACGTCAAGAAGGTAAG
TTGATTTAGATTATCAAGCAGGGAAATTTGATTCGGATTCTCAAGAATAT
TGGTTGGTTTGGCTTCCCCTTCATTTTCTGGCTCCTCTACTACGGCCCTT
CATCACCGTCCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTACCTCCCTC
CCTCCCCCCGATCAGGTGGAGGAGTGGATCGACGAACTCGACGGCCGCCT
CCCTCCTCTCAAGAACTTTATCCTCCCCTCTGGAGGGCTCTGCAGTGCGC
ATCTGCACTTAGCCCGGTACGGAGGGAGGGAGGGAATGGCAGGGAGGGAG
AATGGAGGGCGGGAAGGAGATGGAAATGCTCGTGCATGTGTTTCTTCGCA
ACTCACTTTCTGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCCTGTTCCC
TTTCCCTTCTGTGTCCTTCAGCACCATTTGCCGACGGGCTGAACGAAGCG
TCATCCCCCTTGTCAACTCCGAGCAGGTCGATCCTGAGGTACGCTTGTGC
CCTCCCTCCTTCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTTCGCCTCC
TTTTACTTCGAACGCTGTACCATCCGTGTCTTCTTCTCTCTATCCATCTA
CGTGTGCACACACTCTCTCCTTTTCCTTATAATCGCCTATTCCACCCTCC
TAATTACCCATTCCGCCCTCCTCCTAATCACCCCTTCCTCCTCCTTATCA
CCCATTCCACCCTCGTAATCATCTATTCCATCCTTCTAATAATCCATTCC
ACCATCTTAGTCATTCATTCCACCATCCTAATAATCCATCATCCACGTCT
CTCCTCGTCGCCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCCCACCCCT
CCATGGTCCCATCCCTCTCTCCATCCCCATCCATCCCCTCCTTAGGTGGG
CATCTATTTGAACCGCCTGTCGGACTTCTTGTTCGTCGCGGCGCGGTGGG
CGGCCAAGAGCGAGGGCCACGAGGAGACCGTGTGGGTGAAGTAAAGAGAA
TGAATGGGGAGAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGGGAAGCAT
GCATTTTTCGTTCTCGTCTTTCTCTCTCTGATTCTCTCCATCTCGCTTAT
TTAATTTCTTCCCTCTCGTCTTTTTCATCTTTCGGCGAGAAGGAAGGAGG
AGTGGCAGTGAGAAGGAGGAAAGGCAGACGGGAGGGACGGAGGAAGGGAG
GGAGGGAAAATGAACAGCTACGAATTGATCGCTTGGGCGGAAAGGAGACG
ATGCGAGGGAGAAGAATACAAATACCACAAGAAAAAAAGAATAGGAGACA
GCGAAGGGAAAAACAAACGTGCG
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Coding sequence (CDS) from alignment at chr26:70437..73459-

>NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=CDS|length=1794bp|location=Sequence derived from alignment at chr26:70437..73459- (Nannochloropsis oceanica)
ATGCGCAATGATGTGACGTTAATTATCTATGCGGTGCATGCTGTCTTTGG
TCGTGACTGCGGTAGACAGCGAGGAAACGCTCGCTTCAGGCCCCTCCTTG
TCTCACTCCTGACACACACCCGTGCTTCTCCACCTTCAGGCAGTCCACGA
ACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGACCGCGGGGAGATAAACA
TGCAATGCTGAGCTCGCTGCCTTTCCACACCTTTCGTCCCGTCCGTCGCA
TCATCACATCGTCGTTCGCCACCAACACCACCAGCAGAGGCAGTAGTAGC
GTCTGCAGGCAATTTACCACCCACCTGTCCCGTCGTCCATCCTCGTCTAC
CACCAGCATGGCACCCTCACTCTTGGCGCTCGCGGCGTCGGCGGGAAATA
GCATAACACTGAGTGAATTAACGCTGCACAAGCTGCAAGGAGCACAGCTG
TTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCGGCTCATCGCTGGCAGGA
ATGGCGACGTGGTCTGTCGACCAGTGCAGGGGAAGGAGCCGCCCGGGACA
AGAAGAAGAAGAAGAAGAGTATGATATACACCCGCACGGGAGATAAAGGC
ACGTCCAGCCTATATAATGGAGAGCGACGGCCAAAAAATGACGCGACCTT
CGATGCATTGGGTGCAACGGACGAGCTCAACGCAGCTATTGGCCTCGCGA
AGGAGCATGCCATCACCAAGAGCGCCTTGGGAGGGCCGCTGTGTCAGATC
CAATCCCGCCTTCTGGACTTGGGGGCTGCCATCGCCACGCCCGCGCAGAC
GTCGGACGACCACAAACGAGAACGGACGCGCTTCGACCCCACCCACGTCA
AGAAGGTGGAGGAGTGGATCGACGAACTCGACGGCCGCCTCCCTCCTCTC
AAGAACTTTATCCTCCCCTCTGGAGGGCTCTGCAGTGCGCATCTGCACTT
AGCCCGGTACGGAGGGAGGGAGGGAATGGCAGGGAGGGAGAATGGAGGGC
GGGAAGGAGATGGAAATGCTCGTGCATGTGTTTCTTCGCAACTCACTTTC
TGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCCTGTTCCCTTTCCCTTCT
GTGTCCTTCAGCACCATTTGCCGACGGGCTGAACGAAGCGTCATCCCCCT
TGTCAACTCCGAGCAGGTCGATCCTGAGGTACGCTTGTGCCCTCCCTCCT
TCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTTCGCCTCCTTTTACTTCG
AACGCTGTACCATCCGTGTCTTCTTCTCTCTATCCATCTACGTGTGCACA
CACTCTCTCCTTTTCCTTATAATCGCCTATTCCACCCTCCTAATTACCCA
TTCCGCCCTCCTCCTAATCACCCCTTCCTCCTCCTTATCACCCATTCCAC
CCTCGTAATCATCTATTCCATCCTTCTAATAATCCATTCCACCATCTTAG
TCATTCATTCCACCATCCTAATAATCCATCATCCACGTCTCTCCTCGTCG
CCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCCCACCCCTCCATGGTCCC
ATCCCTCTCTCCATCCCCATCCATCCCCTCCTTAGGTGGGCATCTATTTG
AACCGCCTGTCGGACTTCTTGTTCGTCGCGGCGCGGTGGGCGGCCAAGAG
CGAGGGCCACGAGGAGACCGTGTGGGTGAAGTAAAGAGAATGAATGGGGA
GAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGGGAAGCATGCATTTTTCG
TTCTCGTCTTTCTCTCTCTGATTCTCTCCATCTCGCTTATTTAA
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Synonyms
Publications