NO25G02090.1, NO25G02090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G02090.1
Unique NameNO25G02090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1176
Alignment locationchr25:657470..658950 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:657470..658950 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO25G02090.1 vs.
Match: XP_005854049.1 (isoamyl acetate-hydrolyzing esterase 1-like protein [Nannochloropsis gaditana CCMP526]; XP_005855217.1 isoamyl acetate-hydrolyzing esterase 1-like protein [Nannochloropsis gaditana CCMP526]; EKU21139.1 isoamyl acetate-hydrolyzing esterase 1-like protein [Nannochloropsis gaditana CCMP526]; EKU22308.1 isoamyl acetate-hydrolyzing esterase 1-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 419.9 bits (1078), Expect = 9.000e-114
Identity = 214/325 (65.85%), Postives = 245/325 (75.38%), Query Frame = 0 
Query:   71 RGAISGRRQELTFLGGMTIGIGLATIFQIMFLLTASRA---PTADEDTAAAALPRQPRSSSLRSLISFAFSSSYSRGSST--STGKRPKLLLFGDSLTQRGFEGPGQGWAAGLAHTYGRRADVVNRGFSGYTSKWCALMLPTLFPADDPAWEVPLLAVVFLGANDAALPTREQHVTVHEYQQYLRCIVAYLRNRRRLDGKGTQILLLTPPPVDEDRWEAHCLARGRELDRKNEVTRLYAQACLGVGKTMDVPVVDVWTLLGGADLTEVAPNLGDGLHLSPQGNLLVCEAVLRAIEEYYPDLVPSQLPMQAPEHFEIKSSTTSIDV 391
            R  +S RR++ +   G+ +GIGLATIF    L TA      P A     ++ LPR     ++RS  S  F SS      T   +GKRPK+LLFGDSLTQRGFEGPGQGWAAGLAH YGRRAD+VNRGFSGYT+KWCALM P LFPA DPAWEVP LA+VFLGANDAALP+REQHV VHEY+Q+LR IV++L+ RRR DG  T++LLLTPPPVDE RWE HC +RGR LDRKNEVTRLYA+A  GV + M VPVVD+W  LGG     VAPNLGDGLHLS QG++LV EAVL AIEE YPDL PSQLPMQAPEHFE+ S T SI+V
Sbjct:   29 RAGVSNRREQWSLFMGLVLGIGLATIFNAFLLHTAESRRPDPHASSSLTSSFLPR-----AIRSFFSLPFPSSTRSTVPTIGVSGKRPKILLFGDSLTQRGFEGPGQGWAAGLAHAYGRRADIVNRGFSGYTTKWCALMAPRLFPAGDPAWEVPALAIVFLGANDAALPSREQHVPVHEYEQHLRRIVSHLQGRRREDGSATRVLLLTPPPVDEARWEVHCQSRGRPLDRKNEVTRLYARASKGVAREMQVPVVDLWRRLGGRSPEAVAPNLGDGLHLSAQGSVLVYEAVLTAIEENYPDLAPSQLPMQAPEHFELTSQTQSIEV 348
The following BLAST results are available for this feature:
BLAST of NO25G02090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005854049.19.000e-11465.85isoamyl acetate-hydrolyzing esterase 1-like protei... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G02090NO25G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G02090.1NO25G02090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G02090.1.cds1NO25G02090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02090.1.cds2NO25G02090.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G02090.1 ID=NO25G02090.1|Name=NO25G02090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1176bp
ATGAAGAAGAAGATCGATGGCATCCGGGGGGGAATTGCGGCGTTGGAGAG
AGAAGCATTGCGAGAGGAGAAGGAGGTGGTTCGGGAAAAGAGTAGGAGCA
TGCGGCGGAAGTTTAAGAAAGTTACCAAGGCTGGGTATCGCGCAAATGCG
AGAGCCATCAATATGGTCATGTGTGCGCGTGAATGGCTGCCTTATAAATA
TAGCTGGGGCCGAGGAGCAATTTCCGGCCGGCGACAAGAATTGACGTTCC
TTGGTGGCATGACAATTGGGATCGGTCTGGCCACCATATTTCAAATTATG
TTCCTTCTCACGGCCAGTCGCGCCCCTACCGCCGACGAGGACACTGCTGC
CGCGGCCCTTCCCCGGCAACCTCGATCCTCTTCTCTGCGTTCCTTAATAT
CCTTTGCCTTTTCGTCTAGTTACTCTCGTGGTTCCTCCACCTCCACGGGG
AAGCGGCCCAAGCTCCTCCTTTTTGGGGACAGCTTAACCCAACGTGGCTT
CGAGGGTCCTGGACAAGGGTGGGCAGCTGGTCTGGCCCACACCTATGGTC
GCCGTGCAGACGTCGTGAATCGGGGATTTTCGGGGTACACGTCCAAGTGG
TGTGCCCTCATGTTGCCCACCCTTTTCCCGGCCGATGACCCCGCGTGGGA
AGTACCTCTGCTGGCGGTGGTGTTTTTGGGTGCCAACGACGCAGCCTTGC
CCACCCGTGAGCAGCATGTGACAGTCCACGAATATCAACAGTATTTGCGG
TGTATCGTGGCCTACTTGCGAAACCGACGACGGTTGGACGGCAAGGGGAC
GCAGATCTTGCTCCTGACCCCGCCGCCCGTGGATGAGGACAGGTGGGAGG
CGCATTGCCTGGCACGAGGGCGGGAGCTGGATAGAAAGAATGAAGTGACA
CGGCTATACGCCCAGGCATGCTTGGGGGTTGGAAAGACGATGGACGTGCC
AGTGGTGGACGTGTGGACGCTGCTGGGAGGAGCAGACCTGACTGAGGTAG
CGCCCAACTTGGGGGACGGGCTGCACCTGTCGCCGCAAGGCAACTTGTTG
GTTTGCGAAGCTGTGCTGCGGGCCATTGAAGAATATTACCCTGACTTGGT
CCCTAGTCAGCTGCCAATGCAGGCACCCGAGCATTTTGAGATAAAGAGCA
GTACCACCAGCATCGATGTGGCGTGA
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protein sequence of NO25G02090.1

>NO25G02090.1-protein ID=NO25G02090.1-protein|Name=NO25G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MKKKIDGIRGGIAALEREALREEKEVVREKSRSMRRKFKKVTKAGYRANA
RAINMVMCAREWLPYKYSWGRGAISGRRQELTFLGGMTIGIGLATIFQIM
FLLTASRAPTADEDTAAAALPRQPRSSSLRSLISFAFSSSYSRGSSTSTG
KRPKLLLFGDSLTQRGFEGPGQGWAAGLAHTYGRRADVVNRGFSGYTSKW
CALMLPTLFPADDPAWEVPLLAVVFLGANDAALPTREQHVTVHEYQQYLR
CIVAYLRNRRRLDGKGTQILLLTPPPVDEDRWEAHCLARGRELDRKNEVT
RLYAQACLGVGKTMDVPVVDVWTLLGGADLTEVAPNLGDGLHLSPQGNLL
VCEAVLRAIEEYYPDLVPSQLPMQAPEHFEIKSSTTSIDVA*
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mRNA from alignment at chr25:657470..658950-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G02090.1 ID=NO25G02090.1|Name=NO25G02090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1481bp|location=Sequence derived from alignment at chr25:657470..658950- (Nannochloropsis oceanica)
ATGAAGAAGAAGATCGATGGCATCCGGGGGGGAATTGCGGCGTTGGAGAG
AGAAGCATTGCGAGAGGAGAAGGAGGTGGTTCGGGAAAAGAGTAGGAGCA
TGCGGCGGAAGTTTAAGAAAGTTACCAAGGCTGGGTATCGCGCAAATGCG
AGAGCCATCAATATGGTCATGTGTGCGCGTGAATGGCTGCCTTATAAATA
TAGGTGTGCAAGAAAAGGTAAATAACGGTTTGCCTGCTTGCCGCACCAGA
GGAAGAACTTTTTCCTTCCGTCTTTTAGTCATTCACACCACCTCCTACAC
CACTCTCTGTACACGCCAACAGACAAAAGTGGGGTGAAGGCGCGTCATAT
ACTCTCTGGACTCTGCATGCTCCCTCGCGCTCCCCAGGTTTGCCGCTGCA
TCGCTGGTGCTTCTGTGCCAATTCAAAAATGCCAAGTTCCCATCCCCACC
ACCTCCTCTTCTCGTTCTCATCAATCTACGATCGCTTGACGCCTTCAAAA
ACTTCTAGCTGGGGCCGAGGAGCAATTTCCGGCCGGCGACAAGAATTGAC
GTTCCTTGGTGGCATGACAATTGGGATCGGTCTGGCCACCATATTTCAAA
TTATGTTCCTTCTCACGGCCAGTCGCGCCCCTACCGCCGACGAGGACACT
GCTGCCGCGGCCCTTCCCCGGCAACCTCGATCCTCTTCTCTGCGTTCCTT
AATATCCTTTGCCTTTTCGTCTAGTTACTCTCGTGGTTCCTCCACCTCCA
CGGGGAAGCGGCCCAAGCTCCTCCTTTTTGGGGACAGCTTAACCCAACGT
GGCTTCGAGGGTCCTGGACAAGGGTGGGCAGCTGGTCTGGCCCACACCTA
TGGTCGCCGTGCAGACGTCGTGAATCGGGGATTTTCGGGGTACACGTCCA
AGTGGTGTGCCCTCATGTTGCCCACCCTTTTCCCGGCCGATGACCCCGCG
TGGGAAGTACCTCTGCTGGCGGTGGTGTTTTTGGGTGCCAACGACGCAGC
CTTGCCCACCCGTGAGCAGCATGTGACAGTCCACGAATATCAACAGTATT
TGCGGTGTATCGTGGCCTACTTGCGAAACCGACGACGGTTGGACGGCAAG
GGGACGCAGATCTTGCTCCTGACCCCGCCGCCCGTGGATGAGGACAGGTG
GGAGGCGCATTGCCTGGCACGAGGGCGGGAGCTGGATAGAAAGAATGAAG
TGACACGGCTATACGCCCAGGCATGCTTGGGGGTTGGAAAGACGATGGAC
GTGCCAGTGGTGGACGTGTGGACGCTGCTGGGAGGAGCAGACCTGACTGA
GGTAGCGCCCAACTTGGGGGACGGGCTGCACCTGTCGCCGCAAGGCAACT
TGTTGGTTTGCGAAGCTGTGCTGCGGGCCATTGAAGAATATTACCCTGAC
TTGGTCCCTAGTCAGCTGCCAATGCAGGCACCCGAGCATTTTGAGATAAA
GAGCAGTACCACCAGCATCGATGTGGCGTGA
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Coding sequence (CDS) from alignment at chr25:657470..658950-

>NO25G02090.1 ID=NO25G02090.1|Name=NO25G02090.1|organism=Nannochloropsis oceanica|type=CDS|length=1176bp|location=Sequence derived from alignment at chr25:657470..658950- (Nannochloropsis oceanica)
ATGAAGAAGAAGATCGATGGCATCCGGGGGGGAATTGCGGCGTTGGAGAG
AGAAGCATTGCGAGAGGAGAAGGAGGTGGTTCGGGAAAAGAGTAGGAGCA
TGCGGCGGAAGTTTAAGAAAGTTACCAAGGCTGGGTATCGCGCAAATGCG
AGAGCCATCAATATGGTCATGTGTGCGCGTGAATGGCTGCCTTATAAATA
TAGCTGGGGCCGAGGAGCAATTTCCGGCCGGCGACAAGAATTGACGTTCC
TTGGTGGCATGACAATTGGGATCGGTCTGGCCACCATATTTCAAATTATG
TTCCTTCTCACGGCCAGTCGCGCCCCTACCGCCGACGAGGACACTGCTGC
CGCGGCCCTTCCCCGGCAACCTCGATCCTCTTCTCTGCGTTCCTTAATAT
CCTTTGCCTTTTCGTCTAGTTACTCTCGTGGTTCCTCCACCTCCACGGGG
AAGCGGCCCAAGCTCCTCCTTTTTGGGGACAGCTTAACCCAACGTGGCTT
CGAGGGTCCTGGACAAGGGTGGGCAGCTGGTCTGGCCCACACCTATGGTC
GCCGTGCAGACGTCGTGAATCGGGGATTTTCGGGGTACACGTCCAAGTGG
TGTGCCCTCATGTTGCCCACCCTTTTCCCGGCCGATGACCCCGCGTGGGA
AGTACCTCTGCTGGCGGTGGTGTTTTTGGGTGCCAACGACGCAGCCTTGC
CCACCCGTGAGCAGCATGTGACAGTCCACGAATATCAACAGTATTTGCGG
TGTATCGTGGCCTACTTGCGAAACCGACGACGGTTGGACGGCAAGGGGAC
GCAGATCTTGCTCCTGACCCCGCCGCCCGTGGATGAGGACAGGTGGGAGG
CGCATTGCCTGGCACGAGGGCGGGAGCTGGATAGAAAGAATGAAGTGACA
CGGCTATACGCCCAGGCATGCTTGGGGGTTGGAAAGACGATGGACGTGCC
AGTGGTGGACGTGTGGACGCTGCTGGGAGGAGCAGACCTGACTGAGGTAG
CGCCCAACTTGGGGGACGGGCTGCACCTGTCGCCGCAAGGCAACTTGTTG
GTTTGCGAAGCTGTGCTGCGGGCCATTGAAGAATATTACCCTGACTTGGT
CCCTAGTCAGCTGCCAATGCAGGCACCCGAGCATTTTGAGATAAAGAGCA
GTACCACCAGCATCGATGTGGCGTGA
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Synonyms
Publications