NO25G02010.1, NO25G02010.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G02010.1
Unique NameNO25G02010.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5536
Alignment locationchr25:622104..630195 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:622104..630195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO25G02010.1 vs.
Match: EWM21708.1 (hypothetical protein Naga_100775g1 [Nannochloropsis gaditana])

HSP 1 Score: 261.5 bits (667), Expect = 7.800e-66
Identity = 162/248 (65.32%), Postives = 184/248 (74.19%), Query Frame = 0
Query:  468 GGRERP-PHAAYSPTAAVLRGVAEKVHRFGEGVRNSSFSRTFSSTKLHRDGQDSASREREGGREGGSSSKNDRRDSSRTDRRDSSNTHPSSSHSLNSFSALDHSYHHKHHKGVQEFGVIGEEIYSRMDIEAFLMIVRGFQPAETAMTSTSSVKLERPLAVRAAAAAAAASSRTVPPAVSLGG-----TGAIEGGRGTESALPPLSRATFQPPSPIPNPASLR---ETAKGEAATGTGMEGERGVGGRG 707
            GGR+R   +A+YSPTAAVLRGVA+KV RFGEGVRNS+ SR FSS KLH+DG D+  REREGGRE  +S         R DRRDSSN HP S+ SLN+  +LD S+HHKHHKGVQEFGVIGEE+YSRMDIEAFLMIVRGFQPAE A TSTSSVKLERP A+RAAAAAA ASS+TVPPA+ LGG      G  EGGR   S+LPPLS+ATFQPPSP+P   S++     A  E   G G E  +G G  G
Sbjct:   31 GGRDRHHSYASYSPTAAVLRGVADKVQRFGEGVRNSTLSRNFSSNKLHKDGADA--REREGGRESSTS---------RADRRDSSNVHPGSTSSLNALPSLD-SHHHKHHKGVQEFGVIGEELYSRMDIEAFLMIVRGFQPAEPATTSTSSVKLERPTALRAAAAAAVASSKTVPPALGLGGGGGGLEGGREGGREAGSSLPPLSKATFQPPSPMPTALSVKIRSVVASEEGKAGGGKEESKGTGAAG 266          
The following BLAST results are available for this feature:
BLAST of NO25G02010.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21708.17.800e-6665.32hypothetical protein Naga_100775g1 [Nannochloropsi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G02010NO25G02010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G02010.1NO25G02010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G02010.1.cds1NO25G02010.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds2NO25G02010.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds3NO25G02010.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds4NO25G02010.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds5NO25G02010.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds6NO25G02010.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds7NO25G02010.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds8NO25G02010.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds9NO25G02010.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds10NO25G02010.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds11NO25G02010.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds12NO25G02010.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds13NO25G02010.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds14NO25G02010.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds15NO25G02010.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds16NO25G02010.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G02010.1.cds17NO25G02010.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G02010.1 ID=NO25G02010.1|Name=NO25G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=5536bp
AATGGGCACCGTGCTCACTCCCATCCACACTCACTGACTCTCTTGACTCC
CTACCTCGAACCCTCATGCCCAGGCAATGGGCACCGTGCTCACTCCCAAC
GGGACCAGCATGAACGAAGAGGGCGTCCTGGTCGATAACGACATGACCGA
GCAAACTCCTCGCACGGCCGTGCCGGGCGACTCCTTTACTACCGCTGTCG
ACGGAGAAAGGAAACCAGTCGTTGAGAAGGGAGGTGGTGGGGTCACGGGC
TGGATGCAGCGACAGCGGGCCAGGGGCGTGGGTACAGTCGGCCGAGGGCT
CCTGCTCATGAAACGACCCACTGGCACCTCAGCCCAGCGCCTCAAGGACT
CCCTCATGAGCCGGACGTGGCGGGTGGGGGTGGTGATCGAGCGCATGAAG
GACCTGCCCGAGACCATGTCGCTACTCTACCTTTTCGCACCCATCTACAG
CAACAACAGTCAGATGGACGTGACGGCCATGCATTTCGTCGAGACAGAGC
TAAACTTCAACGATGTCATGATCGCCTCCCACCCGGAGAAGGCCGGGCAA
ATGGACCCGGCACTGTTGGCGGTGAATCATTTCTGTCGGGCCATCGGCGC
GCACATCCACTGCCGGACGATTTTCGGCAACCCACACGGATTCGCCTCGG
ACCTGGTGGCCATCGAGAAGCGGGCTGGGCTTGATATCGTCCTCATGCCG
TGGCGTCGGCCGGTGGCCTATCTGGGCGACTACTACGACCGTTTCGTCTC
CAAAACGTTGAGGAACTCCACCATCACCGTGGCTCTTATGGTGCCCGACC
CAAGCGGAAAAACGGACATGGTCCGGCAGGTCCTGGTCGTTCTGTCCGGC
TGTCCCTCTGACGGCGACTGCGTGGCTCTCACCTCTCGTTTCGCCCTCCA
CTCCCTCGTCTCCATCACCATCATGCTCATGCCGGCCGCCCAGGAGCAAG
CGGAACGGTACGCGGATCTGTTGGCAGACGTTGGGCCTCAGAAACGGTTC
CACAATGTTAATTTGCTCAGGCTGGACAGGATCGACCAAGTGACGGGGGA
GGAGCGAACGCACGAGATGCTGATGAGGGACATCCTGGCCGAGGCCTCGA
AGAAGGGCGAAAATGCCTACGACCTGATCGTGGTGGGCTACCTGTCGTGC
TCCTCCTGGGAGGCCGAGCGCGCGGGCAGCACGCTGTTTGGAAACACGGC
TGCCAACAGCACTGCTAACAGTGCGGCGCCGTCCCGTTCGAGCTCTCCTG
CCATTCCTCCCTCCGCCAACCGGACCATAAACAGCGGCCTGGGCAAGCAC
GAGGCCACCAGCTCCACCGCCTCCTCCGCCTCCACCTCCAGCCTCAGCAA
GAGCGGGGCAAAGCCACCTCGGATACCCCACCACCTCAGCAACACCTTCC
GCGCCTCGTCCCCCCCGATGCACCTGGACGAAACCTACACGAGTGGCGCA
GGAGGTGGTAGCGGGGGAGGGCGGGAGGGAGGGAGGGAGCGACCTCCCCA
TGCCGCCTACTCCCCCACAGCCGCCGTCCTAAGAGGCGTGGCTGAGAAAG
TGCATCGATTTGGGGAGGGCGTCAGAAACTCGTCTTTTTCTCGGACGTTT
TCGTCGACCAAGTTGCACCGAGACGGCCAAGACTCAGCCAGTAGGGAGAG
AGAGGGCGGACGGGAGGGAGGGAGTAGCAGCAAAAATGACAGACGGGACA
GCAGCAGAACCGACAGGCGAGACAGCAGCAACACCCACCCATCGAGCAGT
CACTCGCTGAATTCTTTCTCTGCTCTTGACCACTCCTATCACCACAAGCA
CCACAAAGGTGTGCAAGAGTTCGGTGTCATTGGCGAGGAGATCTACTCCC
GAATGGACATTGAGGCCTTCCTGATGATCGTGCGGGGGTTTCAACCGGCA
GAGACCGCCATGACCAGCACCAGCAGCGTCAAGCTCGAGCGCCCCCTCGC
TGTACGTGCGGCTGCTGCTGCTGCTGCCGCTTCCTCCCGCACCGTGCCTC
CGGCCGTTAGTCTGGGGGGCACGGGGGCGATAGAGGGAGGAAGGGGCACT
GAGTCGGCTCTCCCGCCCTTATCCCGGGCCACCTTTCAGCCGCCCTCGCC
CATACCGAATCCAGCCTCCTTAAGAGAGACGGCGAAGGGAGAAGCAGCGA
CAGGGACAGGGATGGAGGGAGAGAGGGGGGTAGGGGGAAGAGGGGGGGGA
GGAGAGGAGTCCGAGCGGGTAGATATGAGCGTAAGCGACACCTTGAACGC
AGTTAGTGATGCGCTGTCTGCAAGAGGAGAAGGAGGAGGAGAAGGAGGAA
GAGAATGTAAAAATACGTAAAAGCTGATACGTGAAGGACCCAAAGCACAA
GAAATCGATGGAGGGATTAATGAAGGACAGAAAGGCAAGATGTAGTGCTA
GGTACACTTTTTTGAGTGTCCTTGTTTCCCACGCGTCCATTCAAATTCAG
AGCGAGAAACAGCAGAGAAAGAAAGGTGGAAGAGGGCCAACGAGAAGGGT
GTGTGCATAACGAAACATTTTTTTTCCAGAGTACTTTTGTCAGTGTATCG
CTGATTCAGCGTCAGAGCAAGGACGGCGGGACATGGAAGCAGCAGAAATA
TTATTTCATCGGCCGTCTTTTGATGACGCACATAGAGAAAGAGCGAGGAG
GGACGGCAAATAGTGTGAGAGGATGCAAGACTTTAGTGTACGAGTGAGTG
TACGAGTAGCAGGCGACTCGATATGTGGTGAGGGAGAGAATCGTAAGCAG
CCCGTTCCACATCGTTTGGCCGTCTTAACGGTTTTGGGGCCGAGAAAAGG
CGAAATTAGGGTTGAACGAGGGCAAGGAGACTGACATATGAGATTTTTGT
CTCTTGGGTGGAATACTGCTTCCAAAACAGTGTATCGAGAGTGGGTATAT
CGGGCGCGTGCAGATTTCGGGAAATGAAAAGGAATCGCACCATTTCATTC
TTCAAGAGGCCGTGTACGACCCCAAGTGAACCGCAAAAGCTGCGACACGT
CCGTCGACAACAAAAAAGAAGATGCCTTTGCTTCTGCTGAAGTCGACATA
AAATTATGGACATGTCAAAGTCCCTGTGATGCCCCACTCACAACCCAACG
TCTGGCGTAACGTGGCGATCTCATTTGTCTTGCTATCGATCTGTTCCTCA
ACAAAATGTTGCCTTTCTGTCAATTTACGAATCTCGGTCACGAGGTGACC
CAATGTCTAGGTAGTGTTGGGACCATGCGTCGATGGAAGAGAATGCTGAA
GTTTCCGAAAGGTACCGACCAAATCTGACAATTCAGTATCATTTTCAAGA
GGATCATTTGTACTAGACTTTTTCGATGCTTTGGATCTCATATCTAAGTT
ATTTGGCATAACACATATCTGAAAAAGATTTGTCAAAGAACGCATTCTAT
ATCACTCACCAGGATGAACCAACTCCTTTCACAATCTCTTTTCATTCTTG
ATTCTTGGTATCTCGCGTGCAAGTGCAGACCCCATTATCGCGTTCTATTT
CTACTTCGTCCTCTTCGACATTTTCCCCATCGCTCTCCATGTCTTAAATG
GGGACTTCCCAGAGGCTGCAAGTCAGCAAAAGCAGCCGAGAAAAAATGAC
GCCCCTCCGCTTTCCCACTGTCGTCCCGGATGTCCTCTTCAGTAAAGTTT
GGTTTCCTCTCGTCATAATCTCCATCCTGGCGCTCCTCCTGGTCTTTTGT
CTCTTCCTCCTGTCCCTCCTCCCTCCAGTGTCCTTGCTTTTTTTGGGAGC
GCATCGCCCTGGGAGAGTGGGCCGGCAACGTACTCAACCCGCATTCACCC
GCCGCCCGGGCTACTGCCGTCTCGTGTTTAAGTCTACATGCACCGCAGTC
TGCCAGCAGCCGCAGAAATTTCCCATGATTCTTGATCTTGCACCAGCGGC
AGTCTTGCATGTGGCTGCAGGCAATGTGTACTCGTCTTTCCGCGCGCTTT
TGGCGACCCCCCTCTCCGCCTGCTGATCAATGACCGTTGCCGCTGGTGGG
CCAAAGTCATCCGCCCCTGCCATGATACACTTAGAGATACATTTGTTCGT
GATATGGTGTTATGTTAGTTTAGTAAGCGTGCAATCGTGATAAAGTGTGA
AGAGAAAACTTTTTTTTTCTTTGCGCTTGCAATCAAAGTAGCACAACCCC
AGTGACCCAGGCACAACCCCGGAATCACCTTGGCGAGACGAAGAACGCCT
CGTTTTTACTTTTTATTGCGCCAGCTTGTGATGCAATAAAAGACGGAAAA
TGCGGAGAAACATGCATGATAAGTGCAGGAGATGGCACGTGAAAGCGTCA
ACGAAGGCCATGCTGCAGCCACTTTGTAGACCCGTGTGTGGACCCCACCG
TTGTTGCTTGACTCTCTTGCCCAAGTCTTGTGCGCGGTACCACACACAAT
ATCAGACTCAATACCTACCCTCCCGTACAGATTTGTCACCTCGCCCTCTT
TCTCAAATTGTCCCGACGTCTGTGGCTGGCTTCGTGGCGGTGGATGGCTT
TTGTGATTCGTCGCTCGTGCATCATTATCGAGCAGGCTTTTTCGCTCTTT
GGTCTTGCCCTTTGCTTTTGCCACGCCATGGGCACCCGCACAGCCGCCCT
TTATGGTCAAGCATGTGGAAAGAGAGGATTTTAAGTGAAGCTGTGGGGGG
TTTGCTTTTTGGTGTGCCCGGAAACCGAAATCAAACACTGCCCTCACTCG
CCCTCCCTCCCTCCCCCCATAAAACATGCACTGCTTGCTTGCCTTGCTGC
TTGTTGCCAACATCAACAACGACCACCAGAGGGAAGCACGAGAGCATGCT
TAGCAGCTTGGCCGCAAAGGTAGGAGGCACTGCATAGAAAGCGCGCCAGT
TCTCTATGCCATGCCTCTGCCTTTGTGGCCAAGTTGCTAAGCACGGACTA
AAAAGAAAGTTATGTAAGTTTTATGCTCTTTTTACTTTTCACCGTTACGA
GCCTTGCCACCGGCATGGTGACATCTCCTTCTATCACATTTTGAGCACCA
AAGTAAGCCCGCCCCGCATGACGGGGTAGCTCTCGTGGTTCCCTCTGGCG
GTCGTGGTTGATGTTCCGGTCCAGGTAAGGTGGCTTGTGTAGATGCTTTT
CGGGAGGGATTGTTGGTGGGGGTGGGTGGACGGTCGGTGCACGCGACCGC
GAACCGTCGGGGGCATCGACCGCGAATCGTTGGGGGCATGTTGATCCATT
CCCACCTGCCTGTCTGTCTTGCTTGAGTTTCTCTGCCTCGATGATACACG
CAGAGGGATAATGGGGAGAGGGAAGATGAGCGATGGTTGGCGACTCCATA
AAGGTGGATGAATATCGCTCCAGATATCGCCGATCAACAGCGACGCGTGA
ACCTCCAAATGCTAGAGTTTATCAGGTAGAACCAACTAGGGCAGTCTCTG
GAACGGCGATCCATCTTTGTTGTGCGGGCTAGGAACCGTGCCAAGGTATT
CACACAGTAGCACAACCATACATGTCAACAGTGAAGGGATGCGTGCTGCG
GGAGGCATTCTTCTCGACAGCCCACACGGGGACTGG
back to top

protein sequence of NO25G02010.1

>NO25G02010.1-protein ID=NO25G02010.1-protein|Name=NO25G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=748bp
MGTVLTPNGTSMNEEGVLVDNDMTEQTPRTAVPGDSFTTAVDGERKPVVE
KGGGGVTGWMQRQRARGVGTVGRGLLLMKRPTGTSAQRLKDSLMSRTWRV
GVVIERMKDLPETMSLLYLFAPIYSNNSQMDVTAMHFVETELNFNDVMIA
SHPEKAGQMDPALLAVNHFCRAIGAHIHCRTIFGNPHGFASDLVAIEKRA
GLDIVLMPWRRPVAYLGDYYDRFVSKTLRNSTITVALMVPDPSGKTDMVR
QVLVVLSGCPSDGDCVALTSRFALHSLVSITIMLMPAAQEQAERYADLLA
DVGPQKRFHNVNLLRLDRIDQVTGEERTHEMLMRDILAEASKKGENAYDL
IVVGYLSCSSWEAERAGSTLFGNTAANSTANSAAPSRSSSPAIPPSANRT
INSGLGKHEATSSTASSASTSSLSKSGAKPPRIPHHLSNTFRASSPPMHL
DETYTSGAGGGSGGGREGGRERPPHAAYSPTAAVLRGVAEKVHRFGEGVR
NSSFSRTFSSTKLHRDGQDSASREREGGREGGSSSKNDRRDSSRTDRRDS
SNTHPSSSHSLNSFSALDHSYHHKHHKGVQEFGVIGEEIYSRMDIEAFLM
IVRGFQPAETAMTSTSSVKLERPLAVRAAAAAAAASSRTVPPAVSLGGTG
AIEGGRGTESALPPLSRATFQPPSPIPNPASLRETAKGEAATGTGMEGER
GVGGRGGGGEESERVDMSVSDTLNAVSDALSARGEGGGEGGRECKNT*
back to top

mRNA from alignment at chr25:622104..630195-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G02010.1 ID=NO25G02010.1|Name=NO25G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=8092bp|location=Sequence derived from alignment at chr25:622104..630195- (Nannochloropsis oceanica)
AATGGGCACCGTGCTCACTCCCATCCACACTCACTGACTCTCTTGACTCC CTACCTCGAACCCTCATGCCCAGGCAATGGGCACCGTGCTCACTCCCAAC GGGACCAGCATGAACGAAGAGGGCGTCCTGGTCGATAACGACATGAGTAC GTCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCGCCCTTTCTCCCTCCCTC TCTCCCCCCCTCCTCCTCCCCCTCCTCCTCCTCCTCATCAACCCTCCCCA TCACCCTCTTTCCTCCCTCCTTCCTCCGTCCATCCCTCCACAGCCGAGCA AACTCCTCGCACGGCCGTGCCGGGCGACTCCTTTACTACCGCTGTCGACG GAGAAAGGAAACCAGTCGTTGAGAAGGGAGGTGGTGGGGGTAAGTCCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCCTCGAAATGCCGTTCCA CCCTCCTTACATTTTTATCGCCCTCATCCATCCCTTCCCTTCCTCGCCCT CGTCCTCCCTAGTCACGGGCTGGATGCAGCGACAGCGGGCCAGGGGCGTG GGTACAGTCGGCCGAGGGCTCCTGCTCATGAAACGACCCACTGGCACCTC AGCCCAGCGCCTCAAGGACTCCCTCATGAGCCGGTAACCGCCCTCCCTCC CTCCCTCCCTCGAGTCATTCATTTTTACGCTCTTGGACTGAAGGTCCCCC TCCTCCCTCCCCTCCCTCCCTTCCTCCTCCGTTCCCTCCCCCCCCCTCCC TCAGGACGTGGCGGGTGGGGGTGGTGATCGAGCGCATGAAGGACCTGCCC GAGACCATGTCGCTACTCTACCTTTTCGCACCCATCTACAGCAACAACAG TCAGGTACCCCCTCCCTCCCTCCCTCCCCTCCCTTCCTTTTCCGACGGAC GTGACGGCCACCAACGGTATTTTATGGAGACAGCGCATTATCACTCATCC TCTCCTTCCCTCCCCTCCCTCCCTTCCTTCTCCCCCCCCTTTCGCCCTCC CTCACTGGTCAGATGGACGTGACGGCCATGCATTTCGTCGAGACAGAGCT AAACTTCAACGATGTCATGATCGCCTCCCACCCGGAGAAGGTCAGGCGCA AGGGAGGGAGGGAGGGAGGGAAGGAAGAGAGGAAGGAATAGCAGCGCCGC AAGCCCTTCTCGAGCACCTCCACAGCCCATCTCACCCCTCCCTCCCTCTC TCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCATTCCAGGCCG GGCAAATGGACCCGGCACTGTTGGCGGTGAATCATTTCTGTCGGGCCATC GGCGCGCACATCCACTGCCGGACGATTTTCGGCAACCCACACGGATTCGC CTCGGACCTGGTGGCCATCGAGAAGCGGGCTGGGCTTGATATCGTCCTCA TGCCGTGGCGTCGGCCGGTGGCCTATCTGGGTGAGAAGGGAGGGAGGGAG GGAAGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGAGGTT GTCTGGGGTCGGCACCCTTAGACCATTGGAAACACTACAACAGACCGCCC TCCCTTCCTCCTTTTTTCCCTCCCTCCTTCCCCCCTTCCCTCCCCCCCTC CCTCGCAGGCGACTACTACGACCGTTTCGTCTCCAAAACGTTGAGGAACT CCACCATCACCGTGGCTCTTATGGTGCCCGACCCAAGCGGAAAAACGGAC ATGGTCCGGCAGGTGCGTCCCCTCCCTCCCTCCCTCCCTCCCTCCCAGCC TGCCTGCCTCTCTCCCGTGTGCTGCCCTCGTGATGAGCACCTGTTCTCAG CAGGATAACACATGCCGTTCATTCCTCCTTCCCTCCCTTCCTCCCTTCCC TCCCCCCCTTCCTCACTCTCTCTCTCCCCACGTGTAGGTCTGCTAGATAT ACCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCGCTCCTTAACGTGGC CCACATTCATTTTTTCTACCTCCCTCCTTTTCTCTCTCACCGGCGTTTCA CTTCAACCACTGAACCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTGCCCT CTCTCCCTCTCTCAGGTCCTGGTCGTTCTGTCCGGCTGTCCCTCTGACGG CGACTGCGTGGCTCTCACCTCTCGTTTCGCCCTCCACTCCCTCGTCTCCA TCACCATCATGCTCATGCCGGCCGCCCAGGTCAGAAGCAAGGAAGGGAGG GAGGGAGGGAGGGGGGGGGGCGAGGGAGGGGACAGACATCACACCAGACG CCGATTCCTTCGCTTCCTACTATACTCCCTCCATCTCTCTCTCTCTCCCT TCGTCCCCTTGGCACTCCCGTCGTTCCTGCCCGCCTCCCTAGGAGCAAGC GGAACGGTACGCGGATCTGTTGGCAGACGTTGGGCCTCAGAAACGGTTCC ACAATGTTAATTTGCTCAGGTAGGCAGAGAGGGAGGGAGGCAAGGAAGGA GGGAAGAAGGGGAGAACCGCAACAGTCAATCACTGCTGCAGATCTCGAGC GAAACGATGCACGAGCACACATTATACACTCAGCCTTCCGCACCCGCCCG CCCGCCCTCCTTCCCTCCCTTCTTCCTTCCCTCGTCGCTGCTTTCAGGCT GGACAGGATCGACCAAGTGACGGGGGAGGAGCGAACGCACGAGATGCTGA TGAGGGACATCCTGGCCGAGGCCTCGAAGAAGGGTGAGGAGGAGGAAGGG AGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAA GGGCATGATAATCATTCTCTCTTGCTGTACGCCTTTCACCCACCTGCCCT TCCCCCCCTCGTTCCCCCCCTCCTTTCCTCCCTGCAGGCGAAAATGCCTA CGACCTGATCGTGGTGGGCTACCTGTCGTGCTCCTCCTGGGAGGCCGAGC GCGCGGGCAGCACGCTGTTTGGAAACACGGCTGCCAACAGCACTGCTAAC AGTGCGGCGCCGTCCCGTTCGAGGTACGTAGGGAGGGAGGGAGGGAGGGA GGGAAGGAGGGCGAGTCGTGTTACCCTACTTTGTTATGGTTTGTGAGTCG TTGAGCTCGCTGACGTCCCTCCATCCCCTTCTTCTCTCCCCTCCCTCGCC AGCTCTCCTGCCATTCCTCCCTCCGCCAACCGGACCATAAACAGCGGCCT GGGCAAGCACGAGGCCACCAGCTCCACCGCCTCCTCCGCCTCCACCTCCA GCCTCAGCAAGAGCGGGGCAAAGCCACCTCGGATACCCCACCACCTCAGC AACACCTTCCGGTACGTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT TGCTTGCACAAATCTCATCCCCACATCTCCCTCTCTCCCCTTTCTCTTTC CCCTCCCTTTCTCTTCCCTACCCAGCGCCTCGTCCCCCCCGATGCACCTG GACGAAACCTACACGAGTGGCGCAGGAGGTGGTAGCGGGGGAGGGCGGGA GGGAGGGAGGGAGCGACCTCCCCATGCCGCCTACTCCCCCACAGCCGCCG TCCTAAGAGGCGTGGCTGAGAAAGTGCATCGATTTGGGGAGGGCGTCAGG TGAGGAGGGAGGGAAAATGGGAGGGAGGGGGGAAGGAGGGAGGGAGGGAG GGTATTACTTTCCAGTGGGACTCGGGAGACAGGCAGGGAGGGAGAGAGCA CAGGCAGGCAGGGAGGGAGGGTTTGTGTTCATGGTCAGTGAGACTAAGGT CACTCACACCGATTCTTCTTCCCCCTCCCCGTCCTCCTGTCCCTCTCCTC CTCCTTGGATTAGAAACTCGTCTTTTTCTCGGACGTTTTCGTCGACCAAG TTGCACCGAGACGGCCAAGACTCAGCCAGTAGGGAGAGAGAGGGCGGACG GGAGGGAGGGAGTAGCAGCAAAAATGACAGACGGGACAGCAGCAGAACCG ACAGGCGAGACAGCAGCAACACCCACCCATCGAGCAGTCACTCGCTGAAT TCTTTCTCTGCTCTTGACCACTCCTATCACCACAAGCACCACAAAGGTAG CTCCCCTCCTCCCTCCTTCCCTACTAACCCCCCCTCCCTACCTCCCCTGT AATGAATACTCACCCTGCTGCTGCTTTCCTTCCTTTCCTCCCTCCCTCCT TTCCCTCTCCCGCCAGGTGTGCAAGAGTTCGGTGTCATTGGCGAGGAGAT CTACTCCCGAATGGACATTGAGGCCTTCCTGATGATCGTGCGGGGGTTTC AACCGGCAGGTACGATCGAGGGAGGGATAAAGGAGGTGAAGGGAAGAAAG AGGAGAGGAGGAGAGGAGGAGAGCGCAGCACCGTGGGCCAGCTGTTGATC TATCACTCTATCTCTCTTTAAATCCACACCCGCAGAGACCGCCATGACCA GCACCAGCAGCGTCAAGCTCGAGCGCCCCCTCGCTGTACGTGCGGCTGCT GCTGCTGCTGCCGCTTCCTCCCGCACCGTGCCTCCGGCCGTTAGTCTGGG GGGCACGGGGGCGATAGAGGGAGGAAGGGGCACTGAGTCGGCTCTCCCGC CCTTATCCCGGGCCACCTTTCAGCCGCCCTCGCCCATGTAGGTGTTGGAG AAGGGAGGGGTCGCAGGGCATTACGAAAATATATGATAAGCATTTATTTA TTTCCCCCTTGTCGTTTTATCCCACCTAATTAATTTTGTATACACGTGAT GTATGATAGACCGAATCCAGCCTCCTTAAGAGAGACGGCGAAGGGAGAAG CAGCGACAGGGACAGGGATGGAGGGAGAGAGGGGGGTAGGGGGAAGAGGG GGGGGAGGAGAGGAGTCCGAGCGGGTAGATATGAGCGTAAGCGACACCTT GAACGCAGTTAGTGATGCGCTGTCTGCAAGAGGAGAAGGAGGAGGAGAAG GAGGAAGAGAATGTAAAAATACGTAAAAGCTGATACGTGAAGGACCCAAA GCACAAGAAATCGATGGAGGGATTAATGAAGGACAGAAAGGCAAGATGTA GTGCTAGGTACACTTTTTTGAGTGTCCTTGTTTCCCACGCGTCCATTCAA ATTCAGAGCGAGAAACAGCAGAGAAAGAAAGGTGGAAGAGGGCCAACGAG AAGGGTGTGTGCATAACGAAACATTTTTTTTCCAGAGTACTTTTGTCAGT GTATCGCTGATTCAGCGTCAGAGCAAGGACGGCGGGACATGGAAGCAGCA GAAATATTATTTCATCGGCCGTCTTTTGATGACGCACATAGAGAAAGAGC GAGGAGGGACGGCAAATAGTGTGAGAGGATGCAAGACTTTAGTGTACGAG TGAGTGTACGAGTAGCAGGCGACTCGATATGTGGTGAGGGAGAGAATCGT AAGCAGCCCGTTCCACATCGTTTGGCCGTCTTAACGGTTTTGGGGCCGAG AAAAGGCGAAATTAGGGTTGAACGAGGGCAAGGAGACTGACATATGAGAT TTTTGTCTCTTGGGTGGAATACTGCTTCCAAAACAGTGTATCGAGAGTGG GTATATCGGGCGCGTGCAGATTTCGGGAAATGAAAAGGAATCGCACCATT TCATTCTTCAAGAGGCCGTGTACGACCCCAAGTGAACCGCAAAAGCTGCG ACACGTCCGTCGACAACAAAAAAGAAGATGCCTTTGCTTCTGCTGAAGTC GACATAAAATTATGGACATGTCAAAGTCCCTGTGATGCCCCACTCACAAC CCAACGTCTGGCGTAACGTGGCGATCTCATTTGTCTTGCTATCGATCTGT TCCTCAACAAAATGTTGCCTTTCTGTCAATTTACGAATCTCGGTCACGAG GTGACCCAATGTCTAGGTAGTGTTGGGACCATGCGTCGATGGAAGAGAAT GCTGAAGTTTCCGAAAGGTACCGACCAAATCTGACAATTCAGTATCATTT TCAAGAGGATCATTTGTACTAGACTTTTTCGATGCTTTGGATCTCATATC TAAGTTATTTGGCATAACACATATCTGAAAAAGATTTGTCAAAGAACGCA TTCTATATCACTCACCAGGATGAACCAACTCCTTTCACAATCTCTTTTCA TTCTTGATTCTTGGTATCTCGCGTGCAAGTGCAGACCCCATTATCGCGTT CTATTTCTACTTCGTCCTCTTCGACATTTTCCCCATCGCTCTCCATGTCT TAAATGGGGACTTCCCAGAGGCTGCAAGTCAGCAAAAGCAGCCGAGAAAA AATGACGCCCCTCCGCTTTCCCACTGTCGTCCCGGATGTCCTCTTCAGTA AAGTTTGGTTTCCTCTCGTCATAATCTCCATCCTGGCGCTCCTCCTGGTC TTTTGTCTCTTCCTCCTGTCCCTCCTCCCTCCAGTGTCCTTGCTTTTTTT GGGAGCGCATCGCCCTGGGAGAGTGGGCCGGCAACGTACTCAACCCGCAT TCACCCGCCGCCCGGGCTACTGCCGTCTCGTGTTTAAGTCTACATGCACC GCAGTCTGCCAGCAGCCGCAGAAATTTCCCATGATTCTTGATCTTGCACC AGCGGCAGTCTTGCATGTGGCTGCAGGCAATGTGTACTCGTCTTTCCGCG CGCTTTTGGCGACCCCCCTCTCCGCCTGCTGATCAATGACCGTTGCCGCT GGTGGGCCAAAGTCATCCGCCCCTGCCATGATACACTTAGAGATACATTT GTTCGTGATATGGTGTTATGTTAGTTTAGTAAGCGTGCAATCGTGATAAA GTGTGAAGAGAAAACTTTTTTTTTCTTTGCGCTTGCAATCAAAGTAGCAC AACCCCAGTGACCCAGGCACAACCCCGGAATCACCTTGGCGAGACGAAGA ACGCCTCGTTTTTACTTTTTATTGCGCCAGCTTGTGATGCAATAAAAGAC GGAAAATGCGGAGAAACATGCATGATAAGTGCAGGAGATGGCACGTGAAA GCGTCAACGAAGGCCATGCTGCAGCCACTTTGTAGACCCGTGTGTGGACC CCACCGTTGTTGCTTGACTCTCTTGCCCAAGTCTTGTGCGCGGTACCACA CACAATATCAGACTCAATACCTACCCTCCCGTACAGATTTGTCACCTCGC CCTCTTTCTCAAATTGTCCCGACGTCTGTGGCTGGCTTCGTGGCGGTGGA TGGCTTTTGTGATTCGTCGCTCGTGCATCATTATCGAGCAGGCTTTTTCG CTCTTTGGTCTTGCCCTTTGCTTTTGCCACGCCATGGGCACCCGCACAGC CGCCCTTTATGGTCAAGCATGTGGAAAGAGAGGATTTTAAGTGAAGCTGT GGGGGGTTTGCTTTTTGGTGTGCCCGGAAACCGAAATCAAACACTGCCCT CACTCGCCCTCCCTCCCTCCCCCCATAAAACATGCACTGCTTGCTTGCCT TGCTGCTTGTTGCCAACATCAACAACGACCACCAGAGGGAAGCACGAGAG CATGCTTAGCAGCTTGGCCGCAAAGGTAGGAGGCACTGCATAGAAAGCGC GCCAGTTCTCTATGCCATGCCTCTGCCTTTGTGGCCAAGTTGCTAAGCAC GGACTAAAAAGAAAGTTATGTAAGTTTTATGCTCTTTTTACTTTTCACCG TTACGAGCCTTGCCACCGGCATGGTGACATCTCCTTCTATCACATTTTGA GCACCAAAGTAAGCCCGCCCCGCATGACGGGGTAGCTCTCGTGGTTCCCT CTGGCGGTCGTGGTTGATGTTCCGGTCCAGGTAAGGTGGCTTGTGTAGAT GCTTTTCGGGAGGGATTGTTGGTGGGGGTGGGTGGACGGTCGGTGCACGC GACCGCGAACCGTCGGGGGCATCGACCGCGAATCGTTGGGGGCATGTTGA TCCATTCCCACCTGCCTGTCTGTCTTGCTTGAGTTTCTCTGCCTCGATGA TACACGCAGAGGGATAATGGGGAGAGGGAAGATGAGCGATGGTTGGCGAC TCCATAAAGGTGGATGAATATCGCTCCAGATATCGCCGATCAACAGCGAC GCGTGAACCTCCAAATGCTAGAGTTTATCAGGTAGAACCAACTAGGGCAG TCTCTGGAACGGCGATCCATCTTTGTTGTGCGGGCTAGGAACCGTGCCAA GGTATTCACACAGTAGCACAACCATACATGTCAACAGTGAAGGGATGCGT GCTGCGGGAGGCATTCTTCTCGACAGCCCACACGGGGACTGG
back to top

Coding sequence (CDS) from alignment at chr25:622104..630195-

>NO25G02010.1 ID=NO25G02010.1|Name=NO25G02010.1|organism=Nannochloropsis oceanica|type=CDS|length=2244bp|location=Sequence derived from alignment at chr25:622104..630195- (Nannochloropsis oceanica)
ATGGGCACCGTGCTCACTCCCAACGGGACCAGCATGAACGAAGAGGGCGT
CCTGGTCGATAACGACATGACCGAGCAAACTCCTCGCACGGCCGTGCCGG
GCGACTCCTTTACTACCGCTGTCGACGGAGAAAGGAAACCAGTCGTTGAG
AAGGGAGGTGGTGGGGTCACGGGCTGGATGCAGCGACAGCGGGCCAGGGG
CGTGGGTACAGTCGGCCGAGGGCTCCTGCTCATGAAACGACCCACTGGCA
CCTCAGCCCAGCGCCTCAAGGACTCCCTCATGAGCCGGACGTGGCGGGTG
GGGGTGGTGATCGAGCGCATGAAGGACCTGCCCGAGACCATGTCGCTACT
CTACCTTTTCGCACCCATCTACAGCAACAACAGTCAGATGGACGTGACGG
CCATGCATTTCGTCGAGACAGAGCTAAACTTCAACGATGTCATGATCGCC
TCCCACCCGGAGAAGGCCGGGCAAATGGACCCGGCACTGTTGGCGGTGAA
TCATTTCTGTCGGGCCATCGGCGCGCACATCCACTGCCGGACGATTTTCG
GCAACCCACACGGATTCGCCTCGGACCTGGTGGCCATCGAGAAGCGGGCT
GGGCTTGATATCGTCCTCATGCCGTGGCGTCGGCCGGTGGCCTATCTGGG
CGACTACTACGACCGTTTCGTCTCCAAAACGTTGAGGAACTCCACCATCA
CCGTGGCTCTTATGGTGCCCGACCCAAGCGGAAAAACGGACATGGTCCGG
CAGGTCCTGGTCGTTCTGTCCGGCTGTCCCTCTGACGGCGACTGCGTGGC
TCTCACCTCTCGTTTCGCCCTCCACTCCCTCGTCTCCATCACCATCATGC
TCATGCCGGCCGCCCAGGAGCAAGCGGAACGGTACGCGGATCTGTTGGCA
GACGTTGGGCCTCAGAAACGGTTCCACAATGTTAATTTGCTCAGGCTGGA
CAGGATCGACCAAGTGACGGGGGAGGAGCGAACGCACGAGATGCTGATGA
GGGACATCCTGGCCGAGGCCTCGAAGAAGGGCGAAAATGCCTACGACCTG
ATCGTGGTGGGCTACCTGTCGTGCTCCTCCTGGGAGGCCGAGCGCGCGGG
CAGCACGCTGTTTGGAAACACGGCTGCCAACAGCACTGCTAACAGTGCGG
CGCCGTCCCGTTCGAGCTCTCCTGCCATTCCTCCCTCCGCCAACCGGACC
ATAAACAGCGGCCTGGGCAAGCACGAGGCCACCAGCTCCACCGCCTCCTC
CGCCTCCACCTCCAGCCTCAGCAAGAGCGGGGCAAAGCCACCTCGGATAC
CCCACCACCTCAGCAACACCTTCCGCGCCTCGTCCCCCCCGATGCACCTG
GACGAAACCTACACGAGTGGCGCAGGAGGTGGTAGCGGGGGAGGGCGGGA
GGGAGGGAGGGAGCGACCTCCCCATGCCGCCTACTCCCCCACAGCCGCCG
TCCTAAGAGGCGTGGCTGAGAAAGTGCATCGATTTGGGGAGGGCGTCAGA
AACTCGTCTTTTTCTCGGACGTTTTCGTCGACCAAGTTGCACCGAGACGG
CCAAGACTCAGCCAGTAGGGAGAGAGAGGGCGGACGGGAGGGAGGGAGTA
GCAGCAAAAATGACAGACGGGACAGCAGCAGAACCGACAGGCGAGACAGC
AGCAACACCCACCCATCGAGCAGTCACTCGCTGAATTCTTTCTCTGCTCT
TGACCACTCCTATCACCACAAGCACCACAAAGGTGTGCAAGAGTTCGGTG
TCATTGGCGAGGAGATCTACTCCCGAATGGACATTGAGGCCTTCCTGATG
ATCGTGCGGGGGTTTCAACCGGCAGAGACCGCCATGACCAGCACCAGCAG
CGTCAAGCTCGAGCGCCCCCTCGCTGTACGTGCGGCTGCTGCTGCTGCTG
CCGCTTCCTCCCGCACCGTGCCTCCGGCCGTTAGTCTGGGGGGCACGGGG
GCGATAGAGGGAGGAAGGGGCACTGAGTCGGCTCTCCCGCCCTTATCCCG
GGCCACCTTTCAGCCGCCCTCGCCCATACCGAATCCAGCCTCCTTAAGAG
AGACGGCGAAGGGAGAAGCAGCGACAGGGACAGGGATGGAGGGAGAGAGG
GGGGTAGGGGGAAGAGGGGGGGGAGGAGAGGAGTCCGAGCGGGTAGATAT
GAGCGTAAGCGACACCTTGAACGCAGTTAGTGATGCGCTGTCTGCAAGAG
GAGAAGGAGGAGGAGAAGGAGGAAGAGAATGTAAAAATACGTAA
back to top
Synonyms
Publications