NO25G01880.1, NO25G01880.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO25G01880.1
Unique Name	NO25G01880.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3502
Alignment location	chr25:564507..568008 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr25	genome	chr25:564507..568008 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO25G01880.1 vs.
Match: EWM24884.1 (heavy metal translocating p-type atpase [Nannochloropsis gaditana])

HSP 1 Score: 536.6 bits (1381), Expect = 1.800e-148
Identity = 362/800 (45.25%), Postives = 468/800 (58.50%), Query Frame = 0

Query:   52 RVIKSPPSSPSSSSFSASSSASSSSTTVLASTSIPLTTPDSLPP-PTSPP--------STTIINSRLQIANLCCSAEEALIHDLLTPLPGVQAIRISAVGRVAVIRHTSATSTALLLTTLNDAHLGASLQDV-----DASDSNDSGNSSSSSSSKNNNRGLLTRFRRPFSKIAPWLPLLLAGSGWLFSSYGNSHPWPRSLYHALPLPCLLFASLPLFLRILRAGQRKQFTVDFLMATAVVGALLLGDVTEALEVVGLVAVAERVKGMALRYVGRLMEQTGARLSQTQVARVVVGGGDTVAAAGGGDAMAPAAD-----RKGIQS--IAVERPLSSVRIGDVVVVRAGEACPVDGQVLRGEAVMDEAALTGECMPVPKHGGSYVSGGSICQSGAIEVECTALPSESSLRRVQEMVQDIATTRGPSQGIVDSFAAVYTPLLLLLALTVAVHPPLSLLLHPLFSSSPPPSSPLLHFSLKQGLYRSLELLVLACPCALAMSSSLPFLTTLAGSATHGGVLFKSASALESLGKIQVMACDKTGTLTEGRFQVTGRLTLAPQQEEEETVEASSLSTSSSSSSSPSSSSSSSFPSPSLVRLLAASVEDKVAHRLSSAIVADALGCVAE---------QQQKGT-----TLARVSNLVNMEGVGVQATCVFDEDEGGREGGRQYHVAIGNEGLLSSGTSSSPPSLPPSLPTFLAAHPGEAHVYVLVDGRPSLVLSLCDALRPQAMGMMEALKKD-GVEVTLLTGDSEEVALAIQGKVGGKKVLPTVVARMKPFEKLEWVQRRQQMPPP 816
            R I+ P SS      +   S S    +   ST  P+ +P SL P P S          + T   SR++IANLCCS E  L+ +LL PL GV  +++S VGR+A++RHT A S  LLL TLN AHLGASLQDV     D    +D GN     S     R L            PW  LL+A  GW  +   +   W   + + L +PC+L A  PL L +LRA Q  +  V+ LM++AV+GAL LGD+ EAL V+ LV +A+RV+  AL YV  L++ T  RL   QVA V+    +      G        D     R+G +      + P++ VR+GD+V+VRAGE  PVDG V+ GEA MDE+ALTGECMPV K  G+ V+GGSICQ+GA+E+ CTA PS SSLR +Q+MV DIAT++ PSQ ++D FAAVYTPL+L L+  +A+ P +  +L            P+     +QGLYR LELLVLACPCALAM++ LPFLTTLA SA   GVLFKSA+ALE+L  +QV+ACDKTGTLTEGRF V+GRLTL    + +                            P +VRLLAASVE  VAHRLS+A+V DALGCV E         Q+ +G       LA+VS L +MEGVGV+  CV ++ E        + V +GN  LL            P +  FL  + GEAH++VLVDG P + LSL D +R +A  M+ AL  +  VE TLLTGDSE VA A+Q KV G  +LPTV+AR+KP +KL W++ RQ+ PPP
Sbjct:   17 RAIRQPMSSHEKKETAKLLSLSPKKMSGYGST--PVASPRSLTPTPRSREEGEFFMALTKTTTTSRIRIANLCCSMETKLVKELLKPLKGVLDVKVSEVGRIAIVRHTEAVSATLLLATLNAAHLGASLQDVHFNHHDEDADDDEGNDRGGRSQ----RRLRACGGMVHPDAGPWTALLVAAVGWTVAMLSSHLHWRPLVQYVLVIPCVLVAFSPLALPLLRAAQHLRVDVNVLMSSAVIGALCLGDLAEALGVLLLVLMADRVRCAALDYVAALLDSTSGRLMHAQVAHVLSFAAEKDGGEPGKKGKDQGQDVGGKKRRGAEGGLPTTDVPVTEVRVGDLVLVRAGEQAPVDGVVVHGEAAMDESALTGECMPVEKKAGARVAGGSICQAGALEISCTAPPSHSSLRVIQDMVHDIATSQAPSQEMLDRFAAVYTPLVLFLSFGLALAPEVWAVLR---------GKPVAEVGWQQGLYRGLELLVLACPCALAMATPLPFLTTLAASAARAGVLFKSATALETLSTVQVLACDKTGTLTEGRFMVSGRLTLHRTAKHD----------------------------PDVVRLLAASVESNVAHRLSAAVVLDALGCVTEAFYSNKEDGQKPEGNPVPKKKLAKVSKLRHMEGVGVEGECVLEDYE------ESFLVTVGNRALLDDADLDD-----PEVQAFLERYQGEAHLFVLVDGVPEMALSLTDRVRAEAPAMLRALADELQVETTLLTGDSEGVAKALQAKV-GPDLLPTVLARLKPRDKLHWIEERQRQPPP 761

The following BLAST results are available for this feature:

BLAST of NO25G01880.1 vs.

BLAST of NO25G01880.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24884.1	1.800e-148	45.25	heavy metal translocating p-type atpase [Nannochlo...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO25G01880	NO25G01880	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO25G01880.1	NO25G01880.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO25G01880.1.cds1	NO25G01880.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr25:564507..568008-
coding sequence from alignment at chr25:564507..568008-

mRNA sequence

>NO25G01880.1 ID=NO25G01880.1|Name=NO25G01880.1|organism=Nannochloropsis oceanica|type=mRNA|length=3502bp
ATAACAGGTAGAATTTTTCTGCCTTGCCTGCCTTCTTTGCCTGGATCTGT
CCTCGGGTTGGTGAGACCGCCTGCCGTCTCAAGCACCACATAGAAGCTTG
TCCGACGGTGTATCTTGTGCCGACGGCGGCAAACATGGAGGAAGCACGTG
CACCACCACCACCACGGCCGCTCCAACGCGTCCACAATCTCATGCTCCTC
GCCTGTATCGTTGTCACCACCGCGTCTGCGTTTGTCCTTCCTCCGCTCCC
GTCCCCGTCTGCATCGTCCCGGATCCCCCCTCACCTCCGTGTCATCAAGT
CTCCTCCCTCTTCCCCATCCTCTTCCTCCTTCTCCGCCTCCTCCTCCGCC
TCCTCCTCCTCTACCACCGTTCTCGCCTCCACCTCCATTCCTCTCACCAC
CCCCGACTCTCTTCCTCCTCCTACCTCTCCACCAAGCACCACCATCATCA
ACAGCCGCCTCCAGATAGCAAATCTGTGCTGCTCCGCCGAGGAAGCCTTG
ATCCACGACCTCCTCACCCCCCTCCCAGGCGTGCAAGCCATCCGAATCTC
TGCTGTTGGCCGTGTAGCAGTCATCCGCCACACTTCCGCCACCAGTACGG
CCCTCCTCCTGACTACCTTGAACGACGCACACTTAGGGGCCTCGTTGCAA
GACGTCGACGCGTCCGACAGCAACGACAGCGGAAATAGCAGCAGCAGCAG
CAGCAGCAAAAACAACAACCGTGGTCTGCTTACTCGCTTTCGTCGCCCTT
TCTCCAAAATCGCACCATGGCTTCCACTCCTCCTGGCCGGCAGCGGCTGG
CTTTTTTCCTCCTACGGGAACTCCCACCCTTGGCCCCGCTCCCTCTACCA
TGCCCTCCCCCTCCCCTGCCTCCTTTTCGCCTCCCTCCCATTATTCCTCC
GCATCCTCAGAGCCGGGCAACGCAAGCAATTCACGGTCGATTTCCTGATG
GCCACGGCGGTGGTGGGTGCGTTGCTGCTGGGTGATGTAACTGAGGCCTT
GGAAGTTGTGGGTCTGGTGGCAGTCGCGGAGAGAGTGAAGGGCATGGCCC
TCAGGTACGTGGGAAGATTGATGGAGCAGACGGGGGCCCGATTGAGTCAG
ACGCAGGTGGCACGAGTTGTGGTAGGAGGAGGGGATACTGTCGCTGCTGC
TGGTGGTGGTGATGCCATGGCACCTGCTGCAGATCGCAAAGGTATCCAAA
GCATAGCGGTGGAACGTCCGCTCTCAAGCGTGCGTATCGGGGATGTCGTC
GTCGTTCGGGCTGGAGAGGCTTGTCCTGTGGATGGCCAGGTTCTGCGCGG
GGAGGCAGTGATGGACGAAGCGGCCTTGACGGGGGAGTGCATGCCTGTCC
CCAAACATGGAGGGAGCTACGTCTCTGGAGGAAGCATTTGCCAATCAGGG
GCTATCGAAGTCGAGTGCACTGCCCTTCCGAGCGAATCAAGCCTGAGGCG
CGTCCAGGAGATGGTTCAAGACATCGCCACCACCCGAGGCCCCTCCCAAG
GGATTGTCGACTCGTTCGCCGCTGTCTACACCCCCCTCCTCCTCCTCCTC
GCCCTCACTGTGGCCGTCCACCCGCCCCTATCCCTCCTCCTCCACCCCCT
CTTCTCCTCCTCTCCTCCTCCCTCCTCCCCCCTCCTCCACTTCTCACTTA
AACAAGGTCTCTACCGCAGTCTCGAACTGCTCGTCCTAGCGTGTCCCTGT
GCACTGGCCATGTCCTCCTCCCTCCCCTTCCTGACCACTCTCGCCGGCTC
TGCCACCCATGGAGGAGTTCTCTTCAAATCAGCGTCAGCCCTCGAGTCCC
TCGGCAAAATCCAAGTCATGGCATGTGATAAAACGGGCACTTTAACCGAA
GGACGGTTTCAAGTAACGGGCAGACTAACCCTGGCTCCGCAGCAGGAGGA
AGAGGAAACGGTAGAAGCATCCTCCCTTTCTACCTCCTCCTCCTCCTCCT
CCTCCCCCTCGTCGTCGTCGTCGTCGTCGTTCCCTTCCCCCTCCCTCGTT
CGTCTCCTCGCAGCCAGCGTGGAGGATAAGGTGGCCCATCGTCTCTCTTC
TGCCATCGTTGCCGACGCCCTGGGGTGCGTCGCGGAGCAGCAGCAAAAGG
GAACAACGCTGGCACGTGTCTCCAATCTCGTCAACATGGAAGGGGTTGGC
GTGCAAGCAACCTGTGTATTCGATGAGGACGAGGGAGGGAGGGAGGGAGG
GAGGCAATACCACGTGGCTATAGGGAACGAGGGATTGCTGTCATCAGGAA
CATCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTGCCTACCTTCCTCGCC
GCCCACCCAGGGGAAGCGCACGTCTATGTCTTGGTGGACGGACGTCCCTC
CCTCGTCCTCTCCCTATGCGATGCCCTCCGCCCGCAAGCCATGGGAATGA
TGGAGGCATTAAAGAAGGACGGGGTGGAGGTCACCTTACTTACAGGCGAC
TCAGAAGAGGTAGCGTTGGCGATCCAAGGGAAGGTGGGGGGGAAGAAAGT
TTTGCCCACCGTTGTGGCGCGAATGAAACCCTTCGAGAAGCTGGAGTGGG
TGCAGCGAAGGCAGCAGATGCCGCCGCCGAGGGGGAGGGTAGGAGGGAGG
AAGGTCCAGTGGGCCTGGCTATCGGCATGGTTCAGGATGCGAGGAAGGAA
GGAAAGGGAGGGGCAAGAGTATGAGGTCAAGCATGACACGGATAAGAGCG
AGTACGAAGGGCTTGATCACATCCACGATCATTATCACCGTCACAACGAC
GGGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGCACCCACAGCAGCAGCA
GCACCAGCATCAGACAGAGCACACACAGGTGCATGATCATGGCCACGAGG
GCTGCGGGCCGGACGGCTGTGGGGCATTTGATGACGGGCATGATCACTCG
CATTCCCACTCCCACAAGCAACAGAATCAGCAGCAGCAGCAACAACAACA
ACAACAACAACAACAGTGTCTGGTCGCTATGATTGGCGATGGAATCAATG
ACGGGCCTTGTCTTCAAGCAGCGGACGTGGGCATTGCTCTAGGGCAACAC
GGTACAGCTCTCGCTGTGCAAGCAGCCAACATCATCCTCCTTTCCGATAA
CCTCACCCGCATCCCTCAAGCCATGCACATGTCTCGAGCCACTCAAATGC
TGGTAAAGCAAAATTTATTCCTAGCCGTAGGAATGAAAGCTGGGTTGATG
CTCCTGGTGCTGCTGGCTGGAGGGAGAGTGGGAGGGAAGCAGCAGCAGCA
GCTGTGGAAGGCAGTGGCTGTGGATGGCTTGAGTCTTTTGCTTGTGTTGA
TGAATGGCATGAGGCCCCTGTGGTTAGCTAGAAGGATTTTTAGAAAGGAG
AAGGAAGAGAGGAGGGAGGAAGGGACAAAGCAGTGATAGAGAGGCACCTT
TGACAACAAGGAGATTGGGGGATGCCGCGCATGTAAAATATCATAATTGA
AGTCATGAGAAAGAATGAAAGGCAGGGTAAAACTAATTATTACCGATTTG
TG

protein sequence of NO25G01880.1

>NO25G01880.1-protein ID=NO25G01880.1-protein|Name=NO25G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1084bp
MEEARAPPPPRPLQRVHNLMLLACIVVTTASAFVLPPLPSPSASSRIPPH
LRVIKSPPSSPSSSSFSASSSASSSSTTVLASTSIPLTTPDSLPPPTSPP
STTIINSRLQIANLCCSAEEALIHDLLTPLPGVQAIRISAVGRVAVIRHT
SATSTALLLTTLNDAHLGASLQDVDASDSNDSGNSSSSSSSKNNNRGLLT
RFRRPFSKIAPWLPLLLAGSGWLFSSYGNSHPWPRSLYHALPLPCLLFAS
LPLFLRILRAGQRKQFTVDFLMATAVVGALLLGDVTEALEVVGLVAVAER
VKGMALRYVGRLMEQTGARLSQTQVARVVVGGGDTVAAAGGGDAMAPAAD
RKGIQSIAVERPLSSVRIGDVVVVRAGEACPVDGQVLRGEAVMDEAALTG
ECMPVPKHGGSYVSGGSICQSGAIEVECTALPSESSLRRVQEMVQDIATT
RGPSQGIVDSFAAVYTPLLLLLALTVAVHPPLSLLLHPLFSSSPPPSSPL
LHFSLKQGLYRSLELLVLACPCALAMSSSLPFLTTLAGSATHGGVLFKSA
SALESLGKIQVMACDKTGTLTEGRFQVTGRLTLAPQQEEEETVEASSLST
SSSSSSSPSSSSSSSFPSPSLVRLLAASVEDKVAHRLSSAIVADALGCVA
EQQQKGTTLARVSNLVNMEGVGVQATCVFDEDEGGREGGRQYHVAIGNEG
LLSSGTSSSPPSLPPSLPTFLAAHPGEAHVYVLVDGRPSLVLSLCDALRP
QAMGMMEALKKDGVEVTLLTGDSEEVALAIQGKVGGKKVLPTVVARMKPF
EKLEWVQRRQQMPPPRGRVGGRKVQWAWLSAWFRMRGRKEREGQEYEVKH
DTDKSEYEGLDHIHDHYHRHNDGNEEEEEEEEEHPQQQQHQHQTEHTQVH
DHGHEGCGPDGCGAFDDGHDHSHSHSHKQQNQQQQQQQQQQQQQCLVAMI
GDGINDGPCLQAADVGIALGQHGTALAVQAANIILLSDNLTRIPQAMHMS
RATQMLVKQNLFLAVGMKAGLMLLVLLAGGRVGGKQQQQLWKAVAVDGLS
LLLVLMNGMRPLWLARRIFRKEKEERREEGTKQ*

mRNA from alignment at chr25:564507..568008-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO25G01880.1 ID=NO25G01880.1|Name=NO25G01880.1|organism=Nannochloropsis oceanica|type=mRNA|length=3502bp|location=Sequence derived from alignment at chr25:564507..568008- (Nannochloropsis oceanica)
ATAACAGGTAGAATTTTTCTGCCTTGCCTGCCTTCTTTGCCTGGATCTGT
CCTCGGGTTGGTGAGACCGCCTGCCGTCTCAAGCACCACATAGAAGCTTG
TCCGACGGTGTATCTTGTGCCGACGGCGGCAAACATGGAGGAAGCACGTG
CACCACCACCACCACGGCCGCTCCAACGCGTCCACAATCTCATGCTCCTC
GCCTGTATCGTTGTCACCACCGCGTCTGCGTTTGTCCTTCCTCCGCTCCC
GTCCCCGTCTGCATCGTCCCGGATCCCCCCTCACCTCCGTGTCATCAAGT
CTCCTCCCTCTTCCCCATCCTCTTCCTCCTTCTCCGCCTCCTCCTCCGCC
TCCTCCTCCTCTACCACCGTTCTCGCCTCCACCTCCATTCCTCTCACCAC
CCCCGACTCTCTTCCTCCTCCTACCTCTCCACCAAGCACCACCATCATCA
ACAGCCGCCTCCAGATAGCAAATCTGTGCTGCTCCGCCGAGGAAGCCTTG
ATCCACGACCTCCTCACCCCCCTCCCAGGCGTGCAAGCCATCCGAATCTC
TGCTGTTGGCCGTGTAGCAGTCATCCGCCACACTTCCGCCACCAGTACGG
CCCTCCTCCTGACTACCTTGAACGACGCACACTTAGGGGCCTCGTTGCAA
GACGTCGACGCGTCCGACAGCAACGACAGCGGAAATAGCAGCAGCAGCAG
CAGCAGCAAAAACAACAACCGTGGTCTGCTTACTCGCTTTCGTCGCCCTT
TCTCCAAAATCGCACCATGGCTTCCACTCCTCCTGGCCGGCAGCGGCTGG
CTTTTTTCCTCCTACGGGAACTCCCACCCTTGGCCCCGCTCCCTCTACCA
TGCCCTCCCCCTCCCCTGCCTCCTTTTCGCCTCCCTCCCATTATTCCTCC
GCATCCTCAGAGCCGGGCAACGCAAGCAATTCACGGTCGATTTCCTGATG
GCCACGGCGGTGGTGGGTGCGTTGCTGCTGGGTGATGTAACTGAGGCCTT
GGAAGTTGTGGGTCTGGTGGCAGTCGCGGAGAGAGTGAAGGGCATGGCCC
TCAGGTACGTGGGAAGATTGATGGAGCAGACGGGGGCCCGATTGAGTCAG
ACGCAGGTGGCACGAGTTGTGGTAGGAGGAGGGGATACTGTCGCTGCTGC
TGGTGGTGGTGATGCCATGGCACCTGCTGCAGATCGCAAAGGTATCCAAA
GCATAGCGGTGGAACGTCCGCTCTCAAGCGTGCGTATCGGGGATGTCGTC
GTCGTTCGGGCTGGAGAGGCTTGTCCTGTGGATGGCCAGGTTCTGCGCGG
GGAGGCAGTGATGGACGAAGCGGCCTTGACGGGGGAGTGCATGCCTGTCC
CCAAACATGGAGGGAGCTACGTCTCTGGAGGAAGCATTTGCCAATCAGGG
GCTATCGAAGTCGAGTGCACTGCCCTTCCGAGCGAATCAAGCCTGAGGCG
CGTCCAGGAGATGGTTCAAGACATCGCCACCACCCGAGGCCCCTCCCAAG
GGATTGTCGACTCGTTCGCCGCTGTCTACACCCCCCTCCTCCTCCTCCTC
GCCCTCACTGTGGCCGTCCACCCGCCCCTATCCCTCCTCCTCCACCCCCT
CTTCTCCTCCTCTCCTCCTCCCTCCTCCCCCCTCCTCCACTTCTCACTTA
AACAAGGTCTCTACCGCAGTCTCGAACTGCTCGTCCTAGCGTGTCCCTGT
GCACTGGCCATGTCCTCCTCCCTCCCCTTCCTGACCACTCTCGCCGGCTC
TGCCACCCATGGAGGAGTTCTCTTCAAATCAGCGTCAGCCCTCGAGTCCC
TCGGCAAAATCCAAGTCATGGCATGTGATAAAACGGGCACTTTAACCGAA
GGACGGTTTCAAGTAACGGGCAGACTAACCCTGGCTCCGCAGCAGGAGGA
AGAGGAAACGGTAGAAGCATCCTCCCTTTCTACCTCCTCCTCCTCCTCCT
CCTCCCCCTCGTCGTCGTCGTCGTCGTCGTTCCCTTCCCCCTCCCTCGTT
CGTCTCCTCGCAGCCAGCGTGGAGGATAAGGTGGCCCATCGTCTCTCTTC
TGCCATCGTTGCCGACGCCCTGGGGTGCGTCGCGGAGCAGCAGCAAAAGG
GAACAACGCTGGCACGTGTCTCCAATCTCGTCAACATGGAAGGGGTTGGC
GTGCAAGCAACCTGTGTATTCGATGAGGACGAGGGAGGGAGGGAGGGAGG
GAGGCAATACCACGTGGCTATAGGGAACGAGGGATTGCTGTCATCAGGAA
CATCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTGCCTACCTTCCTCGCC
GCCCACCCAGGGGAAGCGCACGTCTATGTCTTGGTGGACGGACGTCCCTC
CCTCGTCCTCTCCCTATGCGATGCCCTCCGCCCGCAAGCCATGGGAATGA
TGGAGGCATTAAAGAAGGACGGGGTGGAGGTCACCTTACTTACAGGCGAC
TCAGAAGAGGTAGCGTTGGCGATCCAAGGGAAGGTGGGGGGGAAGAAAGT
TTTGCCCACCGTTGTGGCGCGAATGAAACCCTTCGAGAAGCTGGAGTGGG
TGCAGCGAAGGCAGCAGATGCCGCCGCCGAGGGGGAGGGTAGGAGGGAGG
AAGGTCCAGTGGGCCTGGCTATCGGCATGGTTCAGGATGCGAGGAAGGAA
GGAAAGGGAGGGGCAAGAGTATGAGGTCAAGCATGACACGGATAAGAGCG
AGTACGAAGGGCTTGATCACATCCACGATCATTATCACCGTCACAACGAC
GGGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGCACCCACAGCAGCAGCA
GCACCAGCATCAGACAGAGCACACACAGGTGCATGATCATGGCCACGAGG
GCTGCGGGCCGGACGGCTGTGGGGCATTTGATGACGGGCATGATCACTCG
CATTCCCACTCCCACAAGCAACAGAATCAGCAGCAGCAGCAACAACAACA
ACAACAACAACAACAGTGTCTGGTCGCTATGATTGGCGATGGAATCAATG
ACGGGCCTTGTCTTCAAGCAGCGGACGTGGGCATTGCTCTAGGGCAACAC
GGTACAGCTCTCGCTGTGCAAGCAGCCAACATCATCCTCCTTTCCGATAA
CCTCACCCGCATCCCTCAAGCCATGCACATGTCTCGAGCCACTCAAATGC
TGGTAAAGCAAAATTTATTCCTAGCCGTAGGAATGAAAGCTGGGTTGATG
CTCCTGGTGCTGCTGGCTGGAGGGAGAGTGGGAGGGAAGCAGCAGCAGCA
GCTGTGGAAGGCAGTGGCTGTGGATGGCTTGAGTCTTTTGCTTGTGTTGA
TGAATGGCATGAGGCCCCTGTGGTTAGCTAGAAGGATTTTTAGAAAGGAG
AAGGAAGAGAGGAGGGAGGAAGGGACAAAGCAGTGATAGAGAGGCACCTT
TGACAACAAGGAGATTGGGGGATGCCGCGCATGTAAAATATCATAATTGA
AGTCATGAGAAAGAATGAAAGGCAGGGTAAAACTAATTATTACCGATTTG
TG

Coding sequence (CDS) from alignment at chr25:564507..568008-

>NO25G01880.1 ID=NO25G01880.1|Name=NO25G01880.1|organism=Nannochloropsis oceanica|type=CDS|length=3252bp|location=Sequence derived from alignment at chr25:564507..568008- (Nannochloropsis oceanica)
ATGGAGGAAGCACGTGCACCACCACCACCACGGCCGCTCCAACGCGTCCA
CAATCTCATGCTCCTCGCCTGTATCGTTGTCACCACCGCGTCTGCGTTTG
TCCTTCCTCCGCTCCCGTCCCCGTCTGCATCGTCCCGGATCCCCCCTCAC
CTCCGTGTCATCAAGTCTCCTCCCTCTTCCCCATCCTCTTCCTCCTTCTC
CGCCTCCTCCTCCGCCTCCTCCTCCTCTACCACCGTTCTCGCCTCCACCT
CCATTCCTCTCACCACCCCCGACTCTCTTCCTCCTCCTACCTCTCCACCA
AGCACCACCATCATCAACAGCCGCCTCCAGATAGCAAATCTGTGCTGCTC
CGCCGAGGAAGCCTTGATCCACGACCTCCTCACCCCCCTCCCAGGCGTGC
AAGCCATCCGAATCTCTGCTGTTGGCCGTGTAGCAGTCATCCGCCACACT
TCCGCCACCAGTACGGCCCTCCTCCTGACTACCTTGAACGACGCACACTT
AGGGGCCTCGTTGCAAGACGTCGACGCGTCCGACAGCAACGACAGCGGAA
ATAGCAGCAGCAGCAGCAGCAGCAAAAACAACAACCGTGGTCTGCTTACT
CGCTTTCGTCGCCCTTTCTCCAAAATCGCACCATGGCTTCCACTCCTCCT
GGCCGGCAGCGGCTGGCTTTTTTCCTCCTACGGGAACTCCCACCCTTGGC
CCCGCTCCCTCTACCATGCCCTCCCCCTCCCCTGCCTCCTTTTCGCCTCC
CTCCCATTATTCCTCCGCATCCTCAGAGCCGGGCAACGCAAGCAATTCAC
GGTCGATTTCCTGATGGCCACGGCGGTGGTGGGTGCGTTGCTGCTGGGTG
ATGTAACTGAGGCCTTGGAAGTTGTGGGTCTGGTGGCAGTCGCGGAGAGA
GTGAAGGGCATGGCCCTCAGGTACGTGGGAAGATTGATGGAGCAGACGGG
GGCCCGATTGAGTCAGACGCAGGTGGCACGAGTTGTGGTAGGAGGAGGGG
ATACTGTCGCTGCTGCTGGTGGTGGTGATGCCATGGCACCTGCTGCAGAT
CGCAAAGGTATCCAAAGCATAGCGGTGGAACGTCCGCTCTCAAGCGTGCG
TATCGGGGATGTCGTCGTCGTTCGGGCTGGAGAGGCTTGTCCTGTGGATG
GCCAGGTTCTGCGCGGGGAGGCAGTGATGGACGAAGCGGCCTTGACGGGG
GAGTGCATGCCTGTCCCCAAACATGGAGGGAGCTACGTCTCTGGAGGAAG
CATTTGCCAATCAGGGGCTATCGAAGTCGAGTGCACTGCCCTTCCGAGCG
AATCAAGCCTGAGGCGCGTCCAGGAGATGGTTCAAGACATCGCCACCACC
CGAGGCCCCTCCCAAGGGATTGTCGACTCGTTCGCCGCTGTCTACACCCC
CCTCCTCCTCCTCCTCGCCCTCACTGTGGCCGTCCACCCGCCCCTATCCC
TCCTCCTCCACCCCCTCTTCTCCTCCTCTCCTCCTCCCTCCTCCCCCCTC
CTCCACTTCTCACTTAAACAAGGTCTCTACCGCAGTCTCGAACTGCTCGT
CCTAGCGTGTCCCTGTGCACTGGCCATGTCCTCCTCCCTCCCCTTCCTGA
CCACTCTCGCCGGCTCTGCCACCCATGGAGGAGTTCTCTTCAAATCAGCG
TCAGCCCTCGAGTCCCTCGGCAAAATCCAAGTCATGGCATGTGATAAAAC
GGGCACTTTAACCGAAGGACGGTTTCAAGTAACGGGCAGACTAACCCTGG
CTCCGCAGCAGGAGGAAGAGGAAACGGTAGAAGCATCCTCCCTTTCTACC
TCCTCCTCCTCCTCCTCCTCCCCCTCGTCGTCGTCGTCGTCGTCGTTCCC
TTCCCCCTCCCTCGTTCGTCTCCTCGCAGCCAGCGTGGAGGATAAGGTGG
CCCATCGTCTCTCTTCTGCCATCGTTGCCGACGCCCTGGGGTGCGTCGCG
GAGCAGCAGCAAAAGGGAACAACGCTGGCACGTGTCTCCAATCTCGTCAA
CATGGAAGGGGTTGGCGTGCAAGCAACCTGTGTATTCGATGAGGACGAGG
GAGGGAGGGAGGGAGGGAGGCAATACCACGTGGCTATAGGGAACGAGGGA
TTGCTGTCATCAGGAACATCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCT
GCCTACCTTCCTCGCCGCCCACCCAGGGGAAGCGCACGTCTATGTCTTGG
TGGACGGACGTCCCTCCCTCGTCCTCTCCCTATGCGATGCCCTCCGCCCG
CAAGCCATGGGAATGATGGAGGCATTAAAGAAGGACGGGGTGGAGGTCAC
CTTACTTACAGGCGACTCAGAAGAGGTAGCGTTGGCGATCCAAGGGAAGG
TGGGGGGGAAGAAAGTTTTGCCCACCGTTGTGGCGCGAATGAAACCCTTC
GAGAAGCTGGAGTGGGTGCAGCGAAGGCAGCAGATGCCGCCGCCGAGGGG
GAGGGTAGGAGGGAGGAAGGTCCAGTGGGCCTGGCTATCGGCATGGTTCA
GGATGCGAGGAAGGAAGGAAAGGGAGGGGCAAGAGTATGAGGTCAAGCAT
GACACGGATAAGAGCGAGTACGAAGGGCTTGATCACATCCACGATCATTA
TCACCGTCACAACGACGGGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGC
ACCCACAGCAGCAGCAGCACCAGCATCAGACAGAGCACACACAGGTGCAT
GATCATGGCCACGAGGGCTGCGGGCCGGACGGCTGTGGGGCATTTGATGA
CGGGCATGATCACTCGCATTCCCACTCCCACAAGCAACAGAATCAGCAGC
AGCAGCAACAACAACAACAACAACAACAACAGTGTCTGGTCGCTATGATT
GGCGATGGAATCAATGACGGGCCTTGTCTTCAAGCAGCGGACGTGGGCAT
TGCTCTAGGGCAACACGGTACAGCTCTCGCTGTGCAAGCAGCCAACATCA
TCCTCCTTTCCGATAACCTCACCCGCATCCCTCAAGCCATGCACATGTCT
CGAGCCACTCAAATGCTGGTAAAGCAAAATTTATTCCTAGCCGTAGGAAT
GAAAGCTGGGTTGATGCTCCTGGTGCTGCTGGCTGGAGGGAGAGTGGGAG
GGAAGCAGCAGCAGCAGCTGTGGAAGGCAGTGGCTGTGGATGGCTTGAGT
CTTTTGCTTGTGTTGATGAATGGCATGAGGCCCCTGTGGTTAGCTAGAAG
GATTTTTAGAAAGGAGAAGGAAGAGAGGAGGGAGGAAGGGACAAAGCAGT
GA

Synonyms

Publications