NO25G01720.1, NO25G01720.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G01720.1
Unique NameNO25G01720.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5120
Alignment locationchr25:501334..507130 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:501334..507130 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO25G01720.1 vs.
Match: EWM21682.1 (sec23/sec24 transport protein [Nannochloropsis gaditana])

HSP 1 Score: 601.3 bits (1549), Expect = 8.400e-168
Identity = 308/428 (71.96%), Postives = 353/428 (82.48%), Query Frame = 0
Query: 1097 MTAGRLHYYPEPLSSHNP---------SLLPSFLSSLHLALSSPLAQEAVLKIRTSIGLSLKQYFAPGVIHPSEELELAALDPNHSFIAELQHDGERIKENTKVYIQLALLYTQSGTGKRMVRVHNLQLPTAAAVSGVFRFADMEAIYAYLTKQAVWQAWSEPLPRVRDGITRATVEMLYQYRHTCASSSPPGQLILPESLKLLPLYALALLKSDALRLNPPEAGRAQGLPDPTADTRAAALHTFLSASEKELVHSTYPRLHELVGLGGQGGRDSGAEARAVRLVRINGCSAESLAGDGVFVLDGWSTLYVYVGRDVGREVWLGLFGREGPPADAHEAGCEVVLAVESSDMAGKVMEALMEMCAMD------GRGARPAVRVVVAGSGSALEGHLVKMLVDDRQKNHQSYVEYLCLVHKQIQNRLAGR 1510
            MTAGRLHY+P P++S            SL P+FL++L  AL+SPLAQEAV+KIR+S+GLSLK Y APG+IHPSEELELAALDP+ SF+AE  HDGE+IKE ++VY+QLALLYTQ GTG+RMVRVHNLQLPTA+AVSGVFR+ADMEAIYA L KQAVWQAWSEPL RVR+ +TRA V+MLYQYR  CA+SSPPGQLILPESLKLLPLYALALLKSDALR+NPPEAGRA GLPDPTAD RAA LH FLSA  K LVH TYPRL+E+VG+G  GGRD    A ++ L+R+NGCSAESL  DGVF+LD W+  Y+YVGRDVG  VW GLF R GPP +AHEAGC + LAVE+SDMAG+V+E L E+C  D      G+GA PA++VVVAGSGS  E H +KMLVDDRQKN QSYVEYLCLVHKQIQNRLAGR
Sbjct:    1 MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVG--GGRDD--TAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424          
The following BLAST results are available for this feature:
BLAST of NO25G01720.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21682.18.400e-16871.96sec23/sec24 transport protein [Nannochloropsis gad... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01720NO25G01720Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G01720.1NO25G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G01720.1.cds1NO25G01720.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G01720.1.cds2NO25G01720.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G01720.1.cds3NO25G01720.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G01720.1.cds4NO25G01720.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G01720.1.cds5NO25G01720.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G01720.1 ID=NO25G01720.1|Name=NO25G01720.1|organism=Nannochloropsis oceanica|type=mRNA|length=5120bp
ATGTCCTATCCACCTCCACCCGGCGGTGGTGGTCCTCCCCACTACCCACC
CCAACAGCAGCAGCAACACCCAGGAGGGCTGCAGCCACCGCTGCCGCCGC
AGCATCAGTACCAACAGCAGCAGCCCCACCAGCACCAGCAGCCGCCCCCG
CAGCAGGGCTACCCTGGTCAAGGCTACCAGCAGCAGCAACACCCGCCACA
GCAGCAGATGTATCAGCAGCCTCCGCAACAGCAGCAGCAGCAGCAGCCCC
CACGACCTGGAGCAGCAGCAGGGGGGATGATGACGCCAAGCCCTCCTGGG
CAGCAGCATCAGCCACCGCGTCCCATGCCTCCTCCGCAACATCATTTGCA
GCAGCAGCAAGCACGTGGTCCTCCTTTTCCCGCCCCTTTTCCTGGCACTG
CGGGGACACCCCGGCACTTGGGACAAACAGGAGGAGGAATAGGAGCCGGA
GGAGGACCTCCCCGCCCTCCCTCCCCTAGGACTTCACCTGCTATGCCGCC
TCCTATGCAAGCCGGCCAAGCACCGCCCCGTGGCGCTCCTTCTCCTTCTC
CGTACCCTCGGCAGATGAATGGGGGGGGTGCCCCTCCTTCTCCCATCCCT
CCTTCTCGCGGAATGATGGCGCCTACCCCTCCTCCTCCCTCTCCTTACCG
CCAGCCGACCCACCAGCAGCAGCTGCCACGAGCGCCGCCGGCAGGTCATT
CTGGTGCTGCCTCCCCCCGGATGCCTGCTGGCTTTCCTTCTACTGCTGCT
GCTCCTCAACCCTACCAGCCGCCCCAGCAACAGCAGGGAGCAAGGCCGGG
ACCTTCTTTGGTGGGAGGAGGAGGAGGAGGGAAAGGGATGATGGCCCCCT
CTCCCCCAATGGGCATGTCTGGTGCTGGACAAGGCCCCGTGAAGCCTTTA
GGAGGAGGAGGAGGGACGGGGGGAGGGGTTGGGGGAGGGCCTGTGCGGCC
CCCGGGACCGATGGGAGGGGCCGCCCCTGCTCCCATGCAGCAGCAGCACC
AGCAGTACCAGCAGCAGCGGCCCACAAGCCCTCGTGCCCTCCCTCAGCCA
CCTACTACTGCTACCCCTTCCCACCCTGGCGCTTTTCGTCCCCCTTTCCC
CCCCTCCTTCCAACAACAACCATCGCAGCAGCAGCAGCAGCAGCAACAAC
AACAGCAGCCTCCTCCCTCCCGCCCTCCCTCCTCTGTTGGGATCGGCCTA
GGGGTCCCTCCTCCGTCCCCTACTCCCTTTGGTGCTCCTGCTCCTCCCCC
CCCTCATCCTTCTTCTCCCGGCCCATCCCGATATAACCACCACCAGCAGC
AGCAGCAGCAGCGGCAACAGCAGGTGCAGCCGCCGCCTGACAACGCTTAC
CGCTCTCCTTCCCTCCCTTCCTCTCCCATGCGGCCCATGCAGCCGATGCC
CGGTGGGGCCTCAGGAAGCAGTACGGCCCCTCCCCCCCCCCCTCCCCAGC
AGCAGCACCACCAGCAATTGCCGCACCAGCACCAGCACCAACCCCCATCA
AGCGGCACTGCAGGGGAAGGAGGGGTGATGATGCCTCCTCCCACGGGTGG
AGGGGGGATGGGCGGTTACCCCTCCCCTCCTCCCCCTCCTCACAAGACGC
CTGGTGGTGCCTTTCCGGGGGGGCTGACCGCGCCCAGTCCGTATGGCTAC
CCTCCTCCTCCTCCACAGCAGTTGCAGCAACAACAAATACTACCACCTCC
TTCCTCCTACCCTTACCAACAACAACAACAACAACAACAACTACAATACC
CAGGAGCTTACCCCCCTCCGCCCGGCACCACCACCAGCGGCAGCAGCGGC
AACAGCGGTGCTTCTCGCCCTCCGGGGCCTTATCCCTCCCCCTCCACCCC
CTCCCAACGCGTGGACCCCAACCAAATCCCGCGTCCCATCGACAGCAGCA
CCACAGGGGAGGGCGGGGGAGAGGGCGGGGTGCCCGGTGCTCCCGCCACC
CCGATGACGTACCGCACGCTGAGCAATGGGGACAGAGCCCCCCCCTGTGC
GACCCGACCGTTTCGGGCCTTGGATGACGGCAACTGCTCCCCTCGCTTCC
TTCGGTCCACAACCTTCCACGTCCCCGTGAGCGGGGAAATCGCCGCGCAG
GCCAAGCTGCCCGTGGCGTTGTTGTGCCGTCCACTGGCCACCCCGGCGGA
CGGGGAGCTGCCGGTGCCGACGGTGGAGTATGGAGACGCTGGGCCCCTCC
GTTGCACCCGGTGCAAGGCCTACATCAATTGCTTCGTGTCATTCCTGGAG
CAAGGCAACAAGTGGAGCTGTAACATCTGCGGGCTCGTCAATGAGCTCCC
ACGGGGCTATGAATGCCAATTAGATTCCTACGGCCATCGCCGGGACAGGG
AGCTACGTCCGGAGTTCTCGCGTGGCTCCGTCGATTGGTTGGTAGGCTCT
GATTACTGCGTCCGTGCCCTCCAAACGCCCATTTATGTTTTTTGTCTCGA
TGTCTCACCTGCCGCCGTTGAAGCCGGGCTGACGGAAGCCACACTCAAGG
GGCTGAAGGAGGCAGTGATGGAAGGCGTGCTGCCTGGAGGGGAAAAGGCG
AAGATGGGGCTGGTGACCTTTGCCGGGAAAATTCAATTTTATCGCATCGG
GGCCGGGTGGAAGGGGGGAGGGAAGGAGGGCGGGGAGGAAGACGGGCCGC
CGTCGGTGTATGTGCTGGGCGATGTCGACGACCCTTTTGCAGCCCTTCCG
CCGGACCAGTGGATGGTGACGGATAAAGCGAAATTCCTGGCCTTGCTGGA
GCACATCCCAGCCTTGTCTTTTGAGGCCGAGGCGGCGGCGGCTGCGGCGG
CTGTTGCGGCCGCTGGGGGGAACGGAGGAGGAGGATTGGGATATGCGCAG
ATGAGGGAGAGGGAGGAAGCGGCGAGTGTGGCTGCAGTGGAAGCGGTGGG
GGATGCCTTGGCGACCCTGGGGGGGAGGGTCTTCATGTTCACGGCGTCGA
GACCCACCCGCGGCGCCGGTGCCCTCCGACTGCGCGCCGACCCCCGGGAT
TACGGCAGTGAACGTGAATCTGCACTCTATTGTCCCGTGGGTGGGAATGT
CATCACCCCTTCCTCCTCTGCGTCCTCCGCGGCCCTTCCCCAAAACCCAG
CCACGGCCGCCGCGAACTTGAAGGACGACAAGGCGCTCGCTGACTACTAC
CACCGCCTCGGCTCCACCCTGGCCAGTCGACAAATTTCCCTCGATATCTT
CATCTGCAACCAGCACCACCCGTCGTTCTCCTCCTCCCCCTCCTTCTCTG
ATTTCCTGGACCTCGGCACTCTGGGAAGACTCACGCACATGACTGCCGGC
CGTCTCCACTACTACCCCGAACCTCTCTCCTCTCACAACCCCTCCCTCCT
CCCTTCCTTCCTTTCCTCCCTCCACCTCGCCCTCTCCTCCCCCCTGGCCC
AAGAAGCAGTCCTGAAAATACGCACCTCCATCGGCCTCTCCCTCAAGCAG
TACTTCGCTCCCGGCGTCATCCACCCCTCGGAGGAGCTTGAGCTGGCCGC
CCTGGACCCGAACCATTCCTTCATCGCCGAGCTCCAGCACGACGGGGAAC
GGATCAAGGAGAACACCAAGGTCTATATCCAATTAGCCCTCCTCTACACA
CAGTCGGGCACCGGGAAACGTATGGTCCGCGTGCATAATCTTCAACTCCC
CACCGCCGCTGCCGTCTCCGGGGTCTTCCGTTTTGCGGATATGGAGGCTA
TTTATGCCTACCTGACCAAGCAGGCCGTCTGGCAGGCGTGGTCTGAACCC
CTTCCCCGTGTCCGTGACGGCATTACTCGCGCCACGGTGGAGATGCTCTA
CCAATACCGTCATACTTGTGCCTCCTCCTCCCCTCCCGGGCAACTCATCC
TCCCCGAGTCTCTCAAGCTCCTCCCGCTCTATGCCCTTGCCCTTCTTAAG
AGCGACGCCCTCCGCCTGAACCCCCCCGAAGCCGGTCGAGCTCAGGGCCT
GCCCGACCCCACCGCAGACACCCGTGCTGCCGCCCTACATACCTTCCTCT
CGGCGTCCGAGAAGGAGCTGGTCCACTCGACGTACCCGCGCTTACACGAA
TTGGTTGGGCTGGGAGGGCAGGGAGGGAGGGATAGCGGGGCGGAAGCGAG
AGCGGTACGTCTGGTGAGGATAAATGGATGTTCGGCAGAGAGTCTTGCGG
GAGACGGCGTGTTTGTGCTGGATGGGTGGTCAACGCTCTACGTGTATGTG
GGGAGGGATGTGGGGAGGGAGGTATGGCTCGGGCTGTTTGGGAGGGAAGG
GCCGCCGGCGGACGCGCACGAGGCGGGTTGTGAAGTGGTGCTGGCGGTGG
AGTCGTCGGACATGGCGGGGAAGGTAATGGAAGCTCTGATGGAGATGTGC
GCGATGGATGGGAGGGGGGCGAGGCCGGCGGTGCGGGTGGTGGTGGCCGG
GTCGGGGAGTGCGCTGGAAGGGCATTTGGTGAAGATGCTGGTGGATGACC
GGCAGAAGAACCATCAAAGTTATGTGGAGTATCTGTGCCTTGTGCATAAG
CAGATTCAGAACAGGTTGGCGGGTCGGTAAAAATGAGATGGTGAAGTCTT
CCTTCCTTCCCACCCTTCCCTCTTTCCCTCCCTTGTTGGCTAATTGGCAG
ATCATTAAAGTGAGGTGATAGAGCCTTCCCTCTCTCTCTCTCTTCCTTCC
TTCCTTCCTGGAGAGAGGGGGAATGGGATGGCGGTGGGAAAGAAAAAATA
TGTTAGTAGTAGAAGAAGAAGAAGGACGAGGAGGGGGAGGAGGAGGAGGA
GGAGGAGTGAAGTTCTGGTGAGAGACAAGCAATTATTTTGAATTTACCAG
AGGGGTTGGGAAAGCAAAGGAGTGGAGGGGGGAGGGAAGGAAAGGAGGAG
AGGGGCAATTCAAGGGAATAGAGTCGAGAGATGGCGAGATAGAAAAAGTA
AAAAACATTGAGCAGGAGCAAAAGGGACACAGGAACGCGAAAGAGCAAGA
AGCACAGTACGAGTGGACGACCCCGAAAGAGGAAAACATAGCACTTTATG
GTAAATAGATATGCGACACTTTCCTCCCCCCTATCCACATCCATATATCT
TTATGCTTCGAATTCACTTTCCGCGCCTCGGGTGGTAACAGCAGCAGCAA
CAACAACAACAACAACAACA
back to top

protein sequence of NO25G01720.1

>NO25G01720.1-protein ID=NO25G01720.1-protein|Name=NO25G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1510bp
MSYPPPPGGGGPPHYPPQQQQQHPGGLQPPLPPQHQYQQQQPHQHQQPPP
QQGYPGQGYQQQQHPPQQQMYQQPPQQQQQQQPPRPGAAAGGMMTPSPPG
QQHQPPRPMPPPQHHLQQQQARGPPFPAPFPGTAGTPRHLGQTGGGIGAG
GGPPRPPSPRTSPAMPPPMQAGQAPPRGAPSPSPYPRQMNGGGAPPSPIP
PSRGMMAPTPPPPSPYRQPTHQQQLPRAPPAGHSGAASPRMPAGFPSTAA
APQPYQPPQQQQGARPGPSLVGGGGGGKGMMAPSPPMGMSGAGQGPVKPL
GGGGGTGGGVGGGPVRPPGPMGGAAPAPMQQQHQQYQQQRPTSPRALPQP
PTTATPSHPGAFRPPFPPSFQQQPSQQQQQQQQQQQPPPSRPPSSVGIGL
GVPPPSPTPFGAPAPPPPHPSSPGPSRYNHHQQQQQQRQQQVQPPPDNAY
RSPSLPSSPMRPMQPMPGGASGSSTAPPPPPPQQQHHQQLPHQHQHQPPS
SGTAGEGGVMMPPPTGGGGMGGYPSPPPPPHKTPGGAFPGGLTAPSPYGY
PPPPPQQLQQQQILPPPSSYPYQQQQQQQQLQYPGAYPPPPGTTTSGSSG
NSGASRPPGPYPSPSTPSQRVDPNQIPRPIDSSTTGEGGGEGGVPGAPAT
PMTYRTLSNGDRAPPCATRPFRALDDGNCSPRFLRSTTFHVPVSGEIAAQ
AKLPVALLCRPLATPADGELPVPTVEYGDAGPLRCTRCKAYINCFVSFLE
QGNKWSCNICGLVNELPRGYECQLDSYGHRRDRELRPEFSRGSVDWLVGS
DYCVRALQTPIYVFCLDVSPAAVEAGLTEATLKGLKEAVMEGVLPGGEKA
KMGLVTFAGKIQFYRIGAGWKGGGKEGGEEDGPPSVYVLGDVDDPFAALP
PDQWMVTDKAKFLALLEHIPALSFEAEAAAAAAAVAAAGGNGGGGLGYAQ
MREREEAASVAAVEAVGDALATLGGRVFMFTASRPTRGAGALRLRADPRD
YGSERESALYCPVGGNVITPSSSASSAALPQNPATAAANLKDDKALADYY
HRLGSTLASRQISLDIFICNQHHPSFSSSPSFSDFLDLGTLGRLTHMTAG
RLHYYPEPLSSHNPSLLPSFLSSLHLALSSPLAQEAVLKIRTSIGLSLKQ
YFAPGVIHPSEELELAALDPNHSFIAELQHDGERIKENTKVYIQLALLYT
QSGTGKRMVRVHNLQLPTAAAVSGVFRFADMEAIYAYLTKQAVWQAWSEP
LPRVRDGITRATVEMLYQYRHTCASSSPPGQLILPESLKLLPLYALALLK
SDALRLNPPEAGRAQGLPDPTADTRAAALHTFLSASEKELVHSTYPRLHE
LVGLGGQGGRDSGAEARAVRLVRINGCSAESLAGDGVFVLDGWSTLYVYV
GRDVGREVWLGLFGREGPPADAHEAGCEVVLAVESSDMAGKVMEALMEMC
AMDGRGARPAVRVVVAGSGSALEGHLVKMLVDDRQKNHQSYVEYLCLVHK
QIQNRLAGR*
back to top

mRNA from alignment at chr25:501334..507130+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G01720.1 ID=NO25G01720.1|Name=NO25G01720.1|organism=Nannochloropsis oceanica|type=mRNA|length=5797bp|location=Sequence derived from alignment at chr25:501334..507130+ (Nannochloropsis oceanica)
ATGTCCTATCCACCTCCACCCGGCGGTGGTGGTCCTCCCCACTACCCACC CCAACAGCAGCAGCAACACCCAGGAGGGCTGCAGCCACCGCTGCCGCCGC AGCATCAGTACCAACAGCAGCAGCCCCACCAGCACCAGCAGCCGCCCCCG CAGCAGGGCTACCCTGGTCAAGGCTACCAGCAGCAGCAACACCCGCCACA GCAGCAGATGTATCAGCAGCCTCCGCAACAGCAGCAGCAGCAGCAGCCCC CACGACCTGGAGCAGCAGCAGGGGGGATGATGACGCCAAGCCCTCCTGGG CAGCAGCATCAGCCACCGCGTCCCATGCCTCCTCCGCAACATCATTTGCA GCAGCAGCAAGCACGTGGTCCTCCTTTTCCCGCCCCTTTTCCTGGCACTG CGGGGACACCCCGGCACTTGGGACAAACAGGAGGAGGAATAGGAGCCGGA GGAGGACCTCCCCGCCCTCCCTCCCCTAGGACTTCACCTGCTATGCCGCC TCCTATGCAAGCCGGCCAAGCACCGCCCCGTGGCGCTCCTTCTCCTTCTC CGTACCCTCGGCAGATGAATGGGGGGGGTGCCCCTCCTTCTCCCATCCCT CCTTCTCGCGGAATGATGGCGCCTACCCCTCCTCCTCCCTCTCCTTACCG CCAGCCGACCCACCAGCAGCAGCTGCCACGAGCGCCGCCGGCAGGTCATT CTGGTGCTGCCTCCCCCCGGATGCCTGCTGGCTTTCCTTCTACTGCTGCT GCTCCTCAACCCTACCAGCCGCCCCAGCAACAGCAGGGAGCAAGGCCGGG ACCTTCTTTGGTGGGAGGAGGAGGAGGAGGGAAAGGGATGATGGCCCCCT CTCCCCCAATGGGCATGTCTGGTGCTGGACAAGGCCCCGTGAAGCCTTTA GGAGGAGGAGGAGGGACGGGGGGAGGGGTTGGGGGAGGGCCTGTGCGGCC CCCGGGACCGATGGGAGGGGCCGCCCCTGCTCCCATGCAGCAGCAGCACC AGCAGTACCAGCAGCAGCGGCCCACAAGCCCTCGTGCCCTCCCTCAGCCA CCTACTACTGCTACCCCTTCCCACCCTGGCGCTTTTCGTCCCCCTTTCCC CCCCTCCTTCCAACAACAACCATCGCAGCAGCAGCAGCAGCAGCAACAAC AACAGCAGCCTCCTCCCTCCCGCCCTCCCTCCTCTGTTGGGATCGGCCTA GGGGTCCCTCCTCCGTCCCCTACTCCCTTTGGTGCTCCTGCTCCTCCCCC CCCTCATCCTTCTTCTCCCGGCCCATCCCGATATAACCACCACCAGCAGC AGCAGCAGCAGCGGCAACAGCAGGTGCAGCCGCCGCCTGACAACGCTTAC CGCTCTCCTTCCCTCCCTTCCTCTCCCATGCGGCCCATGCAGCCGATGCC CGGTGGGGCCTCAGGAAGCAGTACGGCCCCTCCCCCCCCCCCTCCCCAGC AGCAGCACCACCAGCAATTGCCGCACCAGCACCAGCACCAACCCCCATCA AGCGGCACTGCAGGGGAAGGAGGGGTGATGATGCCTCCTCCCACGGGTGG AGGGGGGATGGGCGGTTACCCCTCCCCTCCTCCCCCTCCTCACAAGACGC CTGGTGGTGCCTTTCCGGGGGGGCTGACCGCGCCCAGTCCGTATGGTGAG GGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGATCTGCTCGCAA GATAGTACGGACGCTCATCGTTAATCCACACAACACACACGTAGGCTACC CTCCTCCTCCTCCACAGCAGTTGCAGCAACAACAAATACTACCACCTCCT TCCTCCTACCCTTACCAACAACAACAACAACAACAACAACTACAATACCC AGGAGCTTACCCCCCTCCGCCCGGCACCACCACCAGCGGCAGCAGCGGCA ACAGCGGTGCTTCTCGCCCTCCGGGGCCTTATCCCTCCCCCTCCACCCCC TCCCAACGCGTGGACCCCAACCAAATCCCGCGTCCCATCGACAGCAGCAC CACAGGGGAGGGCGGGGGAGAGGGCGGGGTGCCCGGTGCTCCCGCCACCC CGATGACGTACCGCACGCTGAGCAATGGGGACAGAGCCCCCCCCTGTGCG ACCCGACCGTTTCGGGCCTTGGATGACGGCAACTGCTCCCCTCGCTTCCT TCGGTCCACAACCTTCCACGTCCCCGTGAGCGGGGAAATCGCCGCGCAGG CCAAGCTGCCCGTGGCGTTGTTGTGCCGTCCACTGGCCACCCCGGCGGAC GGGGAGCTGCCGGTGCCGACGGTGGAGTATGGAGACGCTGGGCCCCTCCG TTGCACCCGGTACGTGCTTGCCCTCCCTCCCTCCCTGCCTGCCTGCCTCG TGGCTTGCCCTCCCTCCTTCCCTCCCTGCCTTATGGCTTGCCCTCCCTCC TTCCCACCCTGTACCGTGCGTGGCTGGCTTTTTTTGGATGACCTTTCTAT TTTCTCTTCCCGAGGTGATGATTACGGCCAGACATGCTCCCGAGGATTCT CAACTCTCCCTCCCTCCCCTCTTCCCTCCCTCCCACCGTCCCTCCCTTGC CCCCTCCCTGCAGGTGCAAGGCCTACATCAATTGCTTCGTGTCATTCCTG GAGCAAGGCAACAAGTGGAGCTGTAACATCTGCGGGCTCGTCAATGAGCT CCCACGGGGCTATGAATGCCAATTAGATTCCTACGGCCATCGCCGGGACA GGTTAGCAAGCCTTCCCTCCCTCCCTCCCTCCCTTCCCCGATTTTCTTCT CCGCTTTCCCCCCATGACCCCATTTTCTTCCCTTTCCTACCCTCCCCCCC CCCCTTCCTCCCTCTTTCTCCTTTTCTCCTTGTTACGCACTCAAGACACC AACACCAACCACACAACCACCAACACCGACAACTACCACAGGGAGCTACG TCCGGAGTTCTCGCGTGGCTCCGTCGATTGGTTGGTAGGCTCTGATTACT GCGTCCGTGCCCTCCAAACGCCCATTTATGTTTTTTGTCTCGATGTCTCA CCTGCCGCCGTTGAAGCCGGGCTGACGGAAGCCACACTCAAGGGGCTGAA GGAGGCAGTGATGGAAGGCGTGCTGCCTGGAGGGGAAAAGGCGAAGATGG GGCTGGTGACCTTTGCCGGGAAAATTCAATTTTATCGCATCGGGGCCGGG TGGAAGGGGGGAGGGAAGGAGGGCGGGGAGGAAGACGGGCCGCCGTCGGT GTATGTGCTGGGCGATGTCGACGACCCTTTTGCAGCCCTTCCGCCGGACC AGTGGATGGTGACGGATAAAGCGAAATTCCTGGCCTTGCTGGAGCACATC CCAGCCTTGTCTTTTGAGGCCGAGGCGGCGGCGGCTGCGGCGGCTGTTGC GGCCGCTGGGGGGAACGGAGGAGGAGGATTGGGATATGCGCAGATGAGGG AGAGGGAGGAAGCGGCGAGTGTGGCTGCAGTGGAAGCGGTGGGGGATGCC TTGGCGACCCTGGGGGGGAGGGTCTTCATGTTCACGGCGTCGAGGTAAGG AGGGAGGGAGGGAGGGGGGGAGGGAGTTTGCATTAATAAGCAACCCCATC AGGACGCTAACGTCTTTTTCTTCCTCCCTCCTCCCTCCTCCCTTCCTGCC CTTCCTCCCCACCTCTTTTTCTCCCCAGACCCACCCGCGGCGCCGGTGCC CTCCGACTGCGCGCCGACCCCCGGGATTACGGCAGTGAACGTGAATCTGC ACTCTATTGTCCCGTGGGTGGGAATGTCATCACCCCTTCCTCCTCTGCGT CCTCCGCGGCCCTTCCCCAAAACCCAGCCACGGCCGCCGCGAACTTGAAG GACGACAAGGCGCTCGCTGACTACTACCACCGCCTCGGCTCCACCCTGGC CAGTCGACAAATTTCCCTCGATATCTTCATCTGCAACCAGCACCACCCGT CGTTCTCCTCCTCCCCCTCCTTCTCTGATTTCCTGGACCTCGGCACTCTG GGAAGACTCACGCACATGACTGCCGGCCGTCTCCACTACTACCCCGAACC TCTCTCCTCTCACAACCCCTCCCTCCTCCCTTCCTTCCTTTCCTCCCTCC ACCTCGCCCTCTCCTCCCCCCTGGCCCAAGAAGCAGTCCTGAAAATACGC ACCTCCATCGGCCTCTCCCTCAAGCAGTACTTCGCTCCCGGCGTCATCCA CCCCTCGGAGGAGCTTGAGCTGGCCGCCCTGGACCCGAACCATTCCTTCA TCGCCGAGCTCCAGCACGACGGGGAACGGATCAAGGAGAACACCAAGGTC TATATCCAATTAGCCCTCCTCTACACACAGTCGGGCACCGGGAAACGTAT GGTCCGCGTGCATAATCTTCAACTCCCCACCGCCGCTGCCGTCTCCGGGG TCTTCCGTTTTGCGGATATGGAGGCTATTTATGCCTACCTGACCAAGCAG GCCGTCTGGCAGGCGTGGTCTGAACCCCTTCCCCGTGTCCGTGACGGCAT TACTCGCGCCACGGTGGAGATGCTCTACCAATACCGTCATACTTGTGCCT CCTCCTCCCCTCCCGGGCAACTCATCCTCCCCGAGTCTCTCAAGCTCCTC CCGCTCTATGCCCTTGCCCTTCTTAAGAGCGACGCCCTCCGCCTGAACCC CCCCGAAGCCGGTCGAGCTCAGGGCCTGCCCGACCCCACCGCAGACACCC GTGCTGCCGCCCTACATACCTTCCTCTCGGCGTCCGAGAAGGAGCTGGTC CACTCGACGTACCCGCGCTTACACGAATTGGTTGGGCTGGGAGGGCAGGG AGGGAGGGATAGCGGGGCGGAAGCGAGAGCGGTACGTCTGGTGAGGATAA ATGGATGTTCGGCAGAGAGTCTTGCGGGAGACGGCGTGTTTGTGCTGGAT GGGTGGTCAACGCTCTACGTGTATGTGGGGAGGGATGTGGGGAGGGAGGT ATGGCTCGGGCTGTTTGGGAGGGAAGGGCCGCCGGCGGACGCGCACGAGG CGGGTTGTGAAGTGGTGCTGGCGGTGGAGTCGTCGGACATGGCGGGGAAG GTAATGGAAGCTCTGATGGAGATGTGCGCGATGGATGGGAGGGGGGCGAG GCCGGCGGTGCGGGTGGTGGTGGCCGGGTCGGGGAGTGCGCTGGAAGGGC ATTTGGTGAAGATGCTGGTGGATGACCGGCAGAAGAACCATCAAAGTTAT GTGGAGTATCTGTGCCTTGTGCATAAGCAGATTCAGAACAGGTTGGCGGG TCGGTAAAAATGAGATGGTGAAGTCTTCCTTCCTTCCCACCCTTCCCTCT TTCCCTCCCTTGTTGGCTAATTGGCAGATCATTAAAGTGAGGTGATAGAG CCTTCCCTCTCTCTCTCTCTTCCTTCCTTCCTTCCTGGAGAGAGGGGGAA TGGGATGGCGGTGGGAAAGAAAAAATATGTTAGTAGTAGAAGAAGAAGAA GGACGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGTGAAGTTCTGGTGAGA GACAAGCAATTATTTTGAATTTACCAGAGGGGTTGGGAAAGCAAAGGAGT GGAGGGGGGAGGGAAGGAAAGGAGGAGAGGGGCAATTCAAGGGAATAGAG TCGAGAGATGGCGAGATAGAAAAAGTAAAAAACATTGAGCAGGAGCAAAA GGGACACAGGAACGCGAAAGAGCAAGAAGCACAGTACGAGTGGACGACCC CGAAAGAGGAAAACATAGCACTTTATGGTAAATAGATATGCGACACTTTC CTCCCCCCTATCCACATCCATATATCTTTATGCTTCGAATTCACTTTCCG CGCCTCGGGTGGTAACAGCAGCAGCAACAACAACAACAACAACAACA
back to top

Coding sequence (CDS) from alignment at chr25:501334..507130+

>NO25G01720.1 ID=NO25G01720.1|Name=NO25G01720.1|organism=Nannochloropsis oceanica|type=CDS|length=4530bp|location=Sequence derived from alignment at chr25:501334..507130+ (Nannochloropsis oceanica)
ATGTCCTATCCACCTCCACCCGGCGGTGGTGGTCCTCCCCACTACCCACC
CCAACAGCAGCAGCAACACCCAGGAGGGCTGCAGCCACCGCTGCCGCCGC
AGCATCAGTACCAACAGCAGCAGCCCCACCAGCACCAGCAGCCGCCCCCG
CAGCAGGGCTACCCTGGTCAAGGCTACCAGCAGCAGCAACACCCGCCACA
GCAGCAGATGTATCAGCAGCCTCCGCAACAGCAGCAGCAGCAGCAGCCCC
CACGACCTGGAGCAGCAGCAGGGGGGATGATGACGCCAAGCCCTCCTGGG
CAGCAGCATCAGCCACCGCGTCCCATGCCTCCTCCGCAACATCATTTGCA
GCAGCAGCAAGCACGTGGTCCTCCTTTTCCCGCCCCTTTTCCTGGCACTG
CGGGGACACCCCGGCACTTGGGACAAACAGGAGGAGGAATAGGAGCCGGA
GGAGGACCTCCCCGCCCTCCCTCCCCTAGGACTTCACCTGCTATGCCGCC
TCCTATGCAAGCCGGCCAAGCACCGCCCCGTGGCGCTCCTTCTCCTTCTC
CGTACCCTCGGCAGATGAATGGGGGGGGTGCCCCTCCTTCTCCCATCCCT
CCTTCTCGCGGAATGATGGCGCCTACCCCTCCTCCTCCCTCTCCTTACCG
CCAGCCGACCCACCAGCAGCAGCTGCCACGAGCGCCGCCGGCAGGTCATT
CTGGTGCTGCCTCCCCCCGGATGCCTGCTGGCTTTCCTTCTACTGCTGCT
GCTCCTCAACCCTACCAGCCGCCCCAGCAACAGCAGGGAGCAAGGCCGGG
ACCTTCTTTGGTGGGAGGAGGAGGAGGAGGGAAAGGGATGATGGCCCCCT
CTCCCCCAATGGGCATGTCTGGTGCTGGACAAGGCCCCGTGAAGCCTTTA
GGAGGAGGAGGAGGGACGGGGGGAGGGGTTGGGGGAGGGCCTGTGCGGCC
CCCGGGACCGATGGGAGGGGCCGCCCCTGCTCCCATGCAGCAGCAGCACC
AGCAGTACCAGCAGCAGCGGCCCACAAGCCCTCGTGCCCTCCCTCAGCCA
CCTACTACTGCTACCCCTTCCCACCCTGGCGCTTTTCGTCCCCCTTTCCC
CCCCTCCTTCCAACAACAACCATCGCAGCAGCAGCAGCAGCAGCAACAAC
AACAGCAGCCTCCTCCCTCCCGCCCTCCCTCCTCTGTTGGGATCGGCCTA
GGGGTCCCTCCTCCGTCCCCTACTCCCTTTGGTGCTCCTGCTCCTCCCCC
CCCTCATCCTTCTTCTCCCGGCCCATCCCGATATAACCACCACCAGCAGC
AGCAGCAGCAGCGGCAACAGCAGGTGCAGCCGCCGCCTGACAACGCTTAC
CGCTCTCCTTCCCTCCCTTCCTCTCCCATGCGGCCCATGCAGCCGATGCC
CGGTGGGGCCTCAGGAAGCAGTACGGCCCCTCCCCCCCCCCCTCCCCAGC
AGCAGCACCACCAGCAATTGCCGCACCAGCACCAGCACCAACCCCCATCA
AGCGGCACTGCAGGGGAAGGAGGGGTGATGATGCCTCCTCCCACGGGTGG
AGGGGGGATGGGCGGTTACCCCTCCCCTCCTCCCCCTCCTCACAAGACGC
CTGGTGGTGCCTTTCCGGGGGGGCTGACCGCGCCCAGTCCGTATGGCTAC
CCTCCTCCTCCTCCACAGCAGTTGCAGCAACAACAAATACTACCACCTCC
TTCCTCCTACCCTTACCAACAACAACAACAACAACAACAACTACAATACC
CAGGAGCTTACCCCCCTCCGCCCGGCACCACCACCAGCGGCAGCAGCGGC
AACAGCGGTGCTTCTCGCCCTCCGGGGCCTTATCCCTCCCCCTCCACCCC
CTCCCAACGCGTGGACCCCAACCAAATCCCGCGTCCCATCGACAGCAGCA
CCACAGGGGAGGGCGGGGGAGAGGGCGGGGTGCCCGGTGCTCCCGCCACC
CCGATGACGTACCGCACGCTGAGCAATGGGGACAGAGCCCCCCCCTGTGC
GACCCGACCGTTTCGGGCCTTGGATGACGGCAACTGCTCCCCTCGCTTCC
TTCGGTCCACAACCTTCCACGTCCCCGTGAGCGGGGAAATCGCCGCGCAG
GCCAAGCTGCCCGTGGCGTTGTTGTGCCGTCCACTGGCCACCCCGGCGGA
CGGGGAGCTGCCGGTGCCGACGGTGGAGTATGGAGACGCTGGGCCCCTCC
GTTGCACCCGGTGCAAGGCCTACATCAATTGCTTCGTGTCATTCCTGGAG
CAAGGCAACAAGTGGAGCTGTAACATCTGCGGGCTCGTCAATGAGCTCCC
ACGGGGCTATGAATGCCAATTAGATTCCTACGGCCATCGCCGGGACAGGG
AGCTACGTCCGGAGTTCTCGCGTGGCTCCGTCGATTGGTTGGTAGGCTCT
GATTACTGCGTCCGTGCCCTCCAAACGCCCATTTATGTTTTTTGTCTCGA
TGTCTCACCTGCCGCCGTTGAAGCCGGGCTGACGGAAGCCACACTCAAGG
GGCTGAAGGAGGCAGTGATGGAAGGCGTGCTGCCTGGAGGGGAAAAGGCG
AAGATGGGGCTGGTGACCTTTGCCGGGAAAATTCAATTTTATCGCATCGG
GGCCGGGTGGAAGGGGGGAGGGAAGGAGGGCGGGGAGGAAGACGGGCCGC
CGTCGGTGTATGTGCTGGGCGATGTCGACGACCCTTTTGCAGCCCTTCCG
CCGGACCAGTGGATGGTGACGGATAAAGCGAAATTCCTGGCCTTGCTGGA
GCACATCCCAGCCTTGTCTTTTGAGGCCGAGGCGGCGGCGGCTGCGGCGG
CTGTTGCGGCCGCTGGGGGGAACGGAGGAGGAGGATTGGGATATGCGCAG
ATGAGGGAGAGGGAGGAAGCGGCGAGTGTGGCTGCAGTGGAAGCGGTGGG
GGATGCCTTGGCGACCCTGGGGGGGAGGGTCTTCATGTTCACGGCGTCGA
GACCCACCCGCGGCGCCGGTGCCCTCCGACTGCGCGCCGACCCCCGGGAT
TACGGCAGTGAACGTGAATCTGCACTCTATTGTCCCGTGGGTGGGAATGT
CATCACCCCTTCCTCCTCTGCGTCCTCCGCGGCCCTTCCCCAAAACCCAG
CCACGGCCGCCGCGAACTTGAAGGACGACAAGGCGCTCGCTGACTACTAC
CACCGCCTCGGCTCCACCCTGGCCAGTCGACAAATTTCCCTCGATATCTT
CATCTGCAACCAGCACCACCCGTCGTTCTCCTCCTCCCCCTCCTTCTCTG
ATTTCCTGGACCTCGGCACTCTGGGAAGACTCACGCACATGACTGCCGGC
CGTCTCCACTACTACCCCGAACCTCTCTCCTCTCACAACCCCTCCCTCCT
CCCTTCCTTCCTTTCCTCCCTCCACCTCGCCCTCTCCTCCCCCCTGGCCC
AAGAAGCAGTCCTGAAAATACGCACCTCCATCGGCCTCTCCCTCAAGCAG
TACTTCGCTCCCGGCGTCATCCACCCCTCGGAGGAGCTTGAGCTGGCCGC
CCTGGACCCGAACCATTCCTTCATCGCCGAGCTCCAGCACGACGGGGAAC
GGATCAAGGAGAACACCAAGGTCTATATCCAATTAGCCCTCCTCTACACA
CAGTCGGGCACCGGGAAACGTATGGTCCGCGTGCATAATCTTCAACTCCC
CACCGCCGCTGCCGTCTCCGGGGTCTTCCGTTTTGCGGATATGGAGGCTA
TTTATGCCTACCTGACCAAGCAGGCCGTCTGGCAGGCGTGGTCTGAACCC
CTTCCCCGTGTCCGTGACGGCATTACTCGCGCCACGGTGGAGATGCTCTA
CCAATACCGTCATACTTGTGCCTCCTCCTCCCCTCCCGGGCAACTCATCC
TCCCCGAGTCTCTCAAGCTCCTCCCGCTCTATGCCCTTGCCCTTCTTAAG
AGCGACGCCCTCCGCCTGAACCCCCCCGAAGCCGGTCGAGCTCAGGGCCT
GCCCGACCCCACCGCAGACACCCGTGCTGCCGCCCTACATACCTTCCTCT
CGGCGTCCGAGAAGGAGCTGGTCCACTCGACGTACCCGCGCTTACACGAA
TTGGTTGGGCTGGGAGGGCAGGGAGGGAGGGATAGCGGGGCGGAAGCGAG
AGCGGTACGTCTGGTGAGGATAAATGGATGTTCGGCAGAGAGTCTTGCGG
GAGACGGCGTGTTTGTGCTGGATGGGTGGTCAACGCTCTACGTGTATGTG
GGGAGGGATGTGGGGAGGGAGGTATGGCTCGGGCTGTTTGGGAGGGAAGG
GCCGCCGGCGGACGCGCACGAGGCGGGTTGTGAAGTGGTGCTGGCGGTGG
AGTCGTCGGACATGGCGGGGAAGGTAATGGAAGCTCTGATGGAGATGTGC
GCGATGGATGGGAGGGGGGCGAGGCCGGCGGTGCGGGTGGTGGTGGCCGG
GTCGGGGAGTGCGCTGGAAGGGCATTTGGTGAAGATGCTGGTGGATGACC
GGCAGAAGAACCATCAAAGTTATGTGGAGTATCTGTGCCTTGTGCATAAG
CAGATTCAGAACAGGTTGGCGGGTCGGTAA
back to top
Synonyms
Publications