NO25G01390.2, NO25G01390.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO25G01390.2
Unique Name	NO25G01390.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4170
Alignment location	chr25:390731..396825 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr25	genome	chr25:390731..396825 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO25G01390.2 vs.
Match: CBN79710.1 (Lysyl-tRNA ligase [Ectocarpus siliculosus])

HSP 1 Score: 630.6 bits (1625), Expect = 6.300e-177
Identity = 371/724 (51.24%), Postives = 454/724 (62.71%), Query Frame = 0

Query:   22 MKAEALAKAKAEKKAA-------APPPSQRAK---KVANGGEEEEELTPSQYFEARLRMVAELEASGTSAYPHKYHTTQSIPDFVQAYQGLEPGTKQEGVTVSLAGRVSRRAIQGKLYFYDVTADGAKFQVMTDPRSYAGGEDAFWKVTSYIRRGDIVGVSGHPGKSKKGELSIFAKELTLLSPCLQMLPKGYTGLKNQEVRYRQRYLDLILNSETRRVFYIRAQII-NYIRRFLDTQGFLEVETPMMNMIAGGATAKPFITYHNDLDLRMFMRI-APELYLKAREEGRREGGREGAPVYSLSSLRRTKHITRPPSHPPFFPPSLPLPTQQLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMDMTEKLFSDMVKEITGGYVIKYHPEGPGGTELTIDFSPPWKRIPMVEGLEEKLGVKLPPLDTEEARTVLEALCKKHDVACSNPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGMTERFELFVAKREIANAYTELNQPLVQRARFLQQAAGAAEGDDEAQVHDEEFCVALEHALPPTGGWGCGVDRLTMFLSDKHNIKEVLLFPAMKPELGSA-GATAAAAAAAAAATAAASPGSGGAATVSFAAVVPPSSLAPWRGLDVGSVEGMKKLTAALSGESFLGGKEGPGQVDAQLFEVLKAGMEGGKEGGVSSQALPPAVRRWFQTVAQFVPGVRASW 733
            +KAEA AK KAEK+AA       APP S  A    K   G  +EEEL P+QYF  R R +A+LE  GT+ YPHK+H T SIP+FV  ++ +E G KQE V VSLAGR+ ++  QGKL FY + ADGA  QVM     Y GGE+AFWK    +RRGD++GV+G+PGKSKKGELS+F   + LLSPCL MLP    GLKNQE RYRQRYLDL+ N ETRRVF +    + NYIR F                                LD R F+ +  P + + A       GG    P  +  +        R         P L L  + LV+GGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFY AYADY DLM MTE++ S MVK+I G + IKY    PG   L +DF+PP++R+ M++GLEE L VKLP LD  E    L+AL  +H + C+ P T  RLLDKLVG+FLE+  + P FIT+HPEIMSPLAK HR++PG+TERFELFV  RE+ NAYTELN P+VQR RFL Q+  +  GDDEAQVHDEEFC A+E+ LPPT GWG GVDRLTMFLSDK+NIKEVLLFPAMKPE  +A  +T+     A AA AAA+P +   A VS+  +    S +  + +D+ S  G++KL   L G+SFLGG   PG  DA ++    +             A  PAV+ W  TV  F P +RASW
Sbjct:   13 LKAEAAAKKKAEKEAAKASAAAAAPPASAAASARSKAKAGAADEEELDPTQYFANRSRAIAQLEEEGTNPYPHKFHVTISIPEFVAKFKDVEVGEKQEDV-VSLAGRIVKKREQGKLLFYGMKADGASVQVMASLSDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTMVLLSPCLHMLPNSREGLKNQETRYRQRYLDLMTNDETRRVFQV-RSKVVNYIRSF--------------------------------LDERGFLEVETPMMNMVA-------GGATAKPFVTHHNDLNLDLFMR-------VAPELYL--KMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYEDLMSMTEQMISGMVKKICGSFKIKYQ-LNPGEDPLEVDFTPPFRRVSMMDGLEEVLKVKLPALDDPEIDGKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVHPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPMVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETAAQQSTSRGIGMAPAAAAAAAPAA--KAAVSYPPLFASGS-SLLKDVDLASTTGIQKLEGLLKGKSFLGGPR-PGSEDACVYAAASSVPP-------PLLATSPAVKGWLNTVGFFSPSMRASW 674

The following BLAST results are available for this feature:

BLAST of NO25G01390.2 vs.

BLAST of NO25G01390.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN79710.1	6.300e-177	51.24	Lysyl-tRNA ligase [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO25G01390	NO25G01390	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO25G01390.2	NO25G01390.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO25G01390.2.cds1	NO25G01390.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds2	NO25G01390.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds3	NO25G01390.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds4	NO25G01390.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds5	NO25G01390.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds6	NO25G01390.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds7	NO25G01390.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds8	NO25G01390.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds9	NO25G01390.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds10	NO25G01390.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds11	NO25G01390.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G01390.2.cds12	NO25G01390.2.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr25:390731..396825+
coding sequence from alignment at chr25:390731..396825+

mRNA sequence

>NO25G01390.2 ID=NO25G01390.2|Name=NO25G01390.2|organism=Nannochloropsis oceanica|type=mRNA|length=4170bp
CGCAACTATTTCGTGCGAGCACGGAGCGCGGCAAGCTTTGGGAGCCTTCT
ACTTGATCAAACCTCGCACATAACGACCGAACAGACATTCGCATTGCCTT
CAGCACCACGTACAGCAGATCCTATGGCTACTGCTGCCCCGTGCAGGGGT
GGTCGCGGAGTTTTTAATGGCTCTGTGTTCCTAGAGCTTATTTCCCCCCC
TCCGTTGCTTCCTTCATCCCTCACGGACGGACGGGAATTGCGGACCCCCT
CCCAGTACCACACGACGCCCCCATCTAGGCACCGCTTTAAGGGAACCCAT
AGGTCTAGGTTCAGGACGATGAATGCCTTCATCTTTATCCCCGAGGTGGC
TTGCAATCCTTGCAAAGAAAGGCGCTTGTGCTCACACTTATCATCTCATT
TCCCTACTCCCCTACTACACCCCACGCAGGCCACTTACTAAATCAAGGAG
TCATGGCCGACGAGACAACGGCCAATGGGGGCGAGCCCATGAGCAAGAGT
GCGCTCAAGAAGAAAATGAAGGCGGAAGCCCTCGCCAAGGCCAAGGCCGA
AAAGAAGGCCGCTGCCCCTCCCCCCTCTCAACGCGCCAAGAAAGTAGCCA
ACGGTGGGGAGGAGGAAGAGGAGCTTACCCCGTCGCAGTATTTTGAAGCA
CGCTTGCGGATGGTTGCAGAGCTGGAGGCGAGCGGGACGAGTGCGTACCC
GCACAAGTATCACACAACGCAGAGCATTCCAGACTTTGTGCAGGCGTACC
AAGGGCTAGAGCCAGGGACAAAGCAAGAGGGCGTGACCGTATCTCTAGCG
GGGCGTGTGTCGCGTCGGGCCATTCAAGGCAAGCTTTATTTTTACGACGT
GACGGCTGATGGGGCCAAGTTCCAAGTGATGACAGACCCCAGATCCTACG
CCGGAGGGGAAGACGCCTTCTGGAAGGTTACGTCTTACATTCGACGGGGG
GACATCGTTGGGGTGAGCGGCCACCCGGGGAAGAGCAAAAAAGGCGAGCT
CTCCATCTTTGCCAAGGAGCTGACGTTGCTGTCTCCCTGCTTGCAGATGC
TTCCCAAGGGTTATACGGGTTTGAAGAACCAGGAGGTGCGCTATCGGCAG
CGCTACCTGGACCTCATCCTCAACAGTGAGACACGGCGGGTGTTTTATAT
CCGAGCCCAGATCATTAATTACATTCGACGGTTTTTGGATACGCAGGGGT
TCCTGGAAGTGGAGACACCCATGATGAACATGATTGCCGGAGGAGCCACG
GCCAAGCCATTCATAACCTACCACAACGATCTGGACCTAAGGATGTTCAT
GCGCATTGCCCCCGAGCTCTATCTCAAGGCGAGGGAGGAGGGAAGGAGGG
AAGGAGGGAGGGAGGGAGCACCCGTGTATTCCCTCTCATCACTCCGGCGC
ACCAAACACATCACCCGCCCTCCCTCTCACCCTCCCTTCTTCCCTCCCTC
CCTCCCTCTTCCTACGCAGCAACTGGTGGTTGGGGGCCTCGACCGCGTGT
ATGAAATCGGACGTCAGTTTCGCAACGAGGGGATCGACCTGACCCACAAT
CCCGAATTCACGACCTGCGAGTTCTACATGGCCTACGCTGACTACAACGA
CCTGATGGACATGACTGAGAAACTCTTCTCCGACATGGTCAAGGAGATCA
CCGGAGGCTACGTAATCAAGTACCATCCCGAGGGCCCCGGCGGGACAGAG
CTCACTATCGATTTCTCCCCTCCTTGGAAGCGGATTCCCATGGTCGAGGG
GCTGGAGGAGAAGCTGGGCGTCAAGCTTCCCCCCCTCGATACGGAGGAGG
CACGCACCGTACTTGAGGCGCTGTGTAAGAAGCACGACGTGGCTTGCTCC
AATCCGCGGACCGTGCCCCGCCTCCTCGACAAGCTGGTCGGCGAATTCCT
GGAGGAGGACATCATCTCTCCTGCATTCATCACGGAGCACCCGGAGATCA
TGAGCCCACTGGCCAAATCCCACAGGACCAAGCCAGGGATGACTGAAAGG
TTCGAGCTGTTCGTGGCCAAGCGGGAGATCGCCAATGCCTACACCGAGCT
GAATCAACCCCTAGTGCAACGCGCCCGCTTTTTGCAACAAGCCGCCGGGG
CGGCAGAAGGCGACGACGAGGCTCAGGTCCACGACGAGGAGTTCTGTGTT
GCCCTCGAACACGCCCTCCCCCCCACCGGGGGTTGGGGCTGCGGCGTGGA
CCGTCTGACCATGTTTCTCTCGGACAAGCATAATATCAAGGAGGTTCTTC
TCTTCCCTGCAATGAAGCCTGAACTTGGCTCGGCAGGTGCCACTGCTGCT
GCTGCGGCGGCTGCTGCTGCTGCGACAGCTGCTGCTTCTCCTGGGTCTGG
GGGAGCGGCGACGGTGAGTTTTGCAGCAGTAGTGCCTCCTTCCTCCCTCG
CGCCGTGGAGAGGGTTGGACGTGGGTTCGGTTGAGGGAATGAAGAAATTG
ACGGCCGCATTGAGTGGTGAGAGCTTCCTGGGAGGGAAAGAAGGGCCTGG
GCAGGTCGATGCACAGCTTTTTGAAGTATTGAAGGCAGGGATGGAGGGTG
GGAAGGAGGGAGGGGTGAGCTCGCAGGCACTGCCGCCCGCGGTGAGGAGG
TGGTTCCAAACGGTAGCGCAGTTTGTCCCGGGGGTGCGGGCAAGTTGGAA
GTAGGCCAGGTGGGAGGTAGGGATGGGCTGCATGAGATATATTTATGGAA
GGCGAAAATGAAGGGGAAGGTGGTTCAGGGAGGGAGGGAGGAGTGAGGCG
AGCATTCGCGCATAGGAAAAAAGGGAAGGGAAAGAGAATACAGAGAGGGG
GGCATCCAAGTAAGGAAGGAAAAAAAAGCGATCAAGATCAAGATTGAAAA
AAGACGTTTTGTCGATCAGAGACGGCGGGAAGACGCAACAAGTACTCGCA
TGCGTTAATCCCCCATTAAAACTTGGCTTTGTCTTTGTTGTTGTTTTTGT
TGTCATTGCGTAATACTTGCTCTTCCTTTAATCGTCTTCTTCTTCCTTTC
CTTCTTCTTGTCAGATTTCTTTTGCTCAATTCCTACCATGACGCTGTACC
ATATTTGCACAGCCTTAACCCTAATCAATTATATTCACAAACGAACATTA
CTCGACATCTTTCTTTTTCAAATGCTCCTCTTCCCCCTCCTCCTCCTCCT
CCTCCTCTTGCTTCTATACCCCCTCTTCCTCTCTCCCTCTCTTTATTCAA
AATCCACCTACCAACGGCAACACAGCCGCGAACGCCTTCTCCTCCATCCT
TCTCCGCTCCTCTTCCTCCCCCTCCTCCTCCTCTTCCTCCTCCTCTTCTT
CCTCCCCTTCCTTCACGCCCCTCGCCCTCACAAATGTCATTGGCTCCCCC
TTCCTCTCCCACCACCTCCCTCCCTCCCTCCCTCCTCCATGTTTCGCCTG
TCGATAGAAGACAGCTAGACGGTCCGGTTCCACCTTTAAATGCCACCCCA
GAATTACGCACTGGTTGATGAGCGTCGTCCGGAGTACCCCCACCCTCTCC
CACCTCCTCCCTGACGTCCGCACACAACTCGGCAACAACTCGATTCTGCC
CCCGTACATCCCTCCATCTCCCCTCCCCTCCCTCCCTCCCTTCTTCCCCC
CCTTCCTCCGACTCCTCGGCTTGGGAGGGGGCGGCCTCTTGGCCAGCACC
CGCAATGCTTGGACGAAGGAGTAGTCTTCCATGATTGGCACGTCAGGGAA
GCCTCCCAATACATCAAATACCTTCCTCCGGACAGCCAAGGCCTGATCGC
CGTAGGGCATGGACCAGGGCCAGGAGCTACGCGCAGTGATGCTCGCTTCG
ATGACACGGTAGAAGGGGCGTCGGCCCATAATTTTAAGCTTGAAGGCAGT
GGCAAGGATGGTGGGGTCGCCGGCAAAGGCCCCTCGAACATCGTCTTCCC
AGGTGGGGGGAAGGAGGGTGTCGCCGTGAAGGAAGAGGAGGATGTCGCCT
GCTGCTTCTGCGGCACCGAGATTCAATTGAGCGGCGCGGTTGGCGAGAGG
GGATTGGACAAGGCGGGCACCGAGGGCTAGCGCGAGACGTTGGGTGCCGT
CAGTGGAGCCGCCGTCCACGACAATGACTTCGAGATTTGGATCGTGGATT
TTGAGGCCGTTTTTCCTTACATGTTTGGGCGTTGGAGTGGTGGGAAGGGA
GGGAGGGAGGGGGTTGGGCG

protein sequence of NO25G01390.2

>NO25G01390.2-protein ID=NO25G01390.2-protein|Name=NO25G01390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=734bp
MADETTANGGEPMSKSALKKKMKAEALAKAKAEKKAAAPPPSQRAKKVAN
GGEEEEELTPSQYFEARLRMVAELEASGTSAYPHKYHTTQSIPDFVQAYQ
GLEPGTKQEGVTVSLAGRVSRRAIQGKLYFYDVTADGAKFQVMTDPRSYA
GGEDAFWKVTSYIRRGDIVGVSGHPGKSKKGELSIFAKELTLLSPCLQML
PKGYTGLKNQEVRYRQRYLDLILNSETRRVFYIRAQIINYIRRFLDTQGF
LEVETPMMNMIAGGATAKPFITYHNDLDLRMFMRIAPELYLKAREEGRRE
GGREGAPVYSLSSLRRTKHITRPPSHPPFFPPSLPLPTQQLVVGGLDRVY
EIGRQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMDMTEKLFSDMVKEIT
GGYVIKYHPEGPGGTELTIDFSPPWKRIPMVEGLEEKLGVKLPPLDTEEA
RTVLEALCKKHDVACSNPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIM
SPLAKSHRTKPGMTERFELFVAKREIANAYTELNQPLVQRARFLQQAAGA
AEGDDEAQVHDEEFCVALEHALPPTGGWGCGVDRLTMFLSDKHNIKEVLL
FPAMKPELGSAGATAAAAAAAAAATAAASPGSGGAATVSFAAVVPPSSLA
PWRGLDVGSVEGMKKLTAALSGESFLGGKEGPGQVDAQLFEVLKAGMEGG
KEGGVSSQALPPAVRRWFQTVAQFVPGVRASWK*

mRNA from alignment at chr25:390731..396825+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO25G01390.2 ID=NO25G01390.2|Name=NO25G01390.2|organism=Nannochloropsis oceanica|type=mRNA|length=6095bp|location=Sequence derived from alignment at chr25:390731..396825+ (Nannochloropsis oceanica)
CGCAACTATTTCGTGCGAGCACGGAGCGCGGCAAGCTTTGGGAGCCTTCT
ACTTGATCAAACCTCGCACATAACGACCGAACAGACATTCGCATTGCCTT
CAGCACCACGTACAGCAGATCCTATGGCTACTGCTGCCCCGTGCAGGGGT
GGTCGCGGAGTTTTTAATGGCTCTGTGTTCCTAGAGCTTATTTCCCCCCC
TCCGTTGCTTCCTTCATCCCTCACGGACGGACGGGAATTGCGGACCCCCT
CCCAGTACCACACGACGCCCCCATCTAGGCACCGCTTTAAGGGAACCCAT
AGGTCTAGGTTCAGGACGATGAATGCCTTCATCTTTATCCCCGAGGTGGC
TTGCAATCCTTGCAAAGAAAGGCGCTTGTGCTCACACTTATCATCTCATT
TCCCTACTCCCCTACTACACCCCACGCAGGCCACTTACTAAATCAAGGAG
TCATGGCCGACGAGACAACGGCCAATGGGGGCGAGCCCATGAGCAAGAGT
GCGCTCAAGAAGAAAATGAAGGTACAACTTTCACTCTTTCCCACTCCCTT
CCCGATTCCCCACCCTCCCTTCCTCACCCCCATCTCATTCCTTCCCACTT
CCACACCCTAGGCGGAAGCCCTCGCCAAGGCCAAGGCCGAAAAGAAGGCC
GCTGCCCCTCCCCCCTCTCAACGCGCCAAGAAAGTAGCCAACGGTGGGGA
GGAGGAAGAGGAGCTTACCCCGTCGCAGTATTTTGAAGCACGCTTGCGGA
TGGTTGCAGAGCTGGAGGCGAGCGGGACGAGTGCGTACCCGCACAAGTAT
CACACAACGCAGAGCATTCCAGACTTTGTGCAGGCGTACCAAGGGCTAGA
GCCAGGGACAAAGTGCGTTACTCGGAAGGGAAGGAGGGCGGGACGGAGGG
AGGGAGGGTTAGGCCTCCTACAGTGTCTCCTTCAGCATCATGTGAGATCA
GAATTGTTCGGGTTGTTACTTAAGTGATGTCATGAATGCCCCCCCCTTTC
CTTCCTTGGTTGCAGGCAAGAGGGCGTGACCGTATCTCTAGCGGGGCGTG
TGTCGCGTCGGGCCATTCAAGGCAAGCTTTATTTTTACGACGTGACGGCT
GATGGGGCCAAGGTGAGGAAAGGAGGGAAGAAGGGAAGGAGGGAGGGAGG
TAGAGAACAATCTTGATGACACTTGGTAAGGCTTCTTCCTTCCCTCCCTC
TTTCCCTCCGTCCCTATATCAGTATACACCACGACGGACTCCCAAGCCGC
AAAAGAGTGGGATAACAAGTCTTCCAGAAGGCCAACTCCTACCTTCTAAC
CCCCTCTTCTTCCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCCTCTTCT
AGTTCCAAGTGATGACAGACCCCAGATCCTACGCCGGAGGGGAAGACGCC
TTCTGGAAGGTTACGTCTTACATTCGACGGGGGGACATCGTTGGGGTGAG
CGGCCACCCGGGGAAGAGCAAAAAAGGCGAGCTCTCCATCTTTGCCAAGG
AGCTGACGTTGCTGTCTCCCTGCTTGCAGATGCTTCCCAAGGTACGAATT
TCTATACTGCCCCCCCTCCTTCCCGCCCTCCTTCCCTATTTTCCCTCCAT
GCCCGGCTTTTGGTGGTTGCTGGAACCGGAGGAGACTTACATCTCCCTCC
TTCCTCCCTCCCTCCCTCCCTCTCTCCCCCCGTTCCTCTCTCCCTCTCTC
CCTCCCTCCCTCTCTCCCCCCGTTCCTCTCTCCCTCTTTCCTCCCTCCAT
TGCAGGGTTATACGGGTTTGAAGAACCAGGAGGTGCGCTATCGGCAGCGC
TACCTGGACCTCATCCTCAACAGTGAGACACGGCGGGTGTTTTATATCCG
AGCCCAGATCATTAATTACATTCGACGGTTTTTGGATACGCAGGGGTTCC
TGGTAGGTGCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATAGCTTCACG
TACCTCCTTTCACATGCCCTCTTCACCCTACTGTACCTCTTGGCTCTTGT
AGTAAGTCCCTCCCTCCCTCCCTCCCTCCGCCCCTCCCTCCCCTCTTCCA
GGAAGTGGAGACACCCATGATGAACATGATTGCCGGAGGAGCCACGGCCA
AGCCATTCATAACCTACCACAACGATCTGGACCTAAGGATGTTCATGCGC
ATTGCCCCCGAGCTCTATCTCAAGGCGAGGGAGGAGGGAAGGAGGGAAGG
AGGGAGGGAGGGAGCACCCGTGTATTCCCTCTCATCACTCCGGCGCACCA
AACACATCACCCGCCCTCCCTCTCACCCTCCCTTCTTCCCTCCCTCCCTC
CCTCTTCCTACGCAGCAACTGGTGGTTGGGGGCCTCGACCGCGTGTATGA
AATCGGACGTCAGTTTCGCAACGAGGGGATCGACCTGACCCACAATCCCG
AATTCACGACCTGCGAGTTCTACATGGTACTTCCCTCCCTTCTCCTTCCC
TTCTCCTCTATTCACCTGCATCTGCCTATATTCCGTCAATTCACTCTAAT
TTCTGACGCCTCCCTCCCTCCCTCACTCCCTCCCTCCCTCCAGGCCTACG
CTGACTACAACGACCTGATGGACATGACTGAGAAACTCTTCTCCGACATG
GTCAAGGAGATCACCGGAGGTAAGCTCCTCTCTTCCTCCCTCCCTCCCTC
CCTCCCTCTCTCTCTCCATTCGTCCCTCCGTCCCTCCCCAGCGGGAGTTG
ATTCACTCTCGATCTCTCACCCCTCCCCCCCTCCCTCTAGGCTACGTAAT
CAAGTACCATCCCGAGGGCCCCGGCGGGACAGAGCTCACTATCGATTTCT
CCCCTCCTTGGAAGCGGATTCCCATGGTCGAGGGGCTGGAGGTAAAGACG
GAGGGAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGGGAGGGCTTGTCC
TTGTGTGTCTTTTTCGACGTTTTCTGAGAAGCTGGGAATCAAGCTCTCTC
CTCTTGGCCCCTCTCGAGGCGCGGTGCAAGAAACACCCACTCACTCACTT
TTACCTTTTCCTCCTCCTCGATCTCCTCCTCCTCCTCCTCCCTCCCTCCC
TCTGACCATACAGGAGAAGCTGGGCGTCAAGCTTCCCCCCCTCGATACGG
AGGAGGCACGCACCGTACTTGAGGCGCTGTGTAAGAAGCACGACGTGGCT
TGCTCCAATCCGCGGACCGTGCCCCGCCTCCTCGACAAGCTGGTCGGCGA
ATTCCTGGAGGTGCGGAAGGGAGGGAGGGAGGGTGGGAAGAGAAGATGAT
GCAGGCCGGAGGAGGACATATAAAATTGTGAGAATGCGATCCTTGACTCG
TTTGCAAATTTGCAGAAACTTGAATGCTGACGGCCAACTTCATCCCCCCC
CCTCCCTCCTTCCTTGCCTCCCTACCTCCCTCGTCCTAACCCTCGATTGC
CCTCCCTCCCTCCCTCCGTCCCTTCTTCTAGGAGGACATCATCTCTCCTG
CATTCATCACGGAGCACCCGGAGATCATGAGCCCACTGGCCAAATCCCAC
AGGACCAAGCCAGGGATGACTGAAAGGTAAGGACCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTTTTGCCTCCATC
ACTGTACGCCCGAAGAACATGCAGCCTCTCATGGTTATGTCAAGAGAGAG
GGAGGGAGGGAGGGAGGGAGGGAACGTACATGGGTTGGGAGGGAGGGAAG
AGAAGTAGGATGAGTGCACCCCCCCCCGATTTCAGAACTTCCTTTCCTCA
ATGACAGCTTATCCCAATTACTCTACCTCAATTAATCCTCAATTTAATTA
CTCACAGGTTCGAGCTGTTCGTGGCCAAGCGGGAGATCGCCAATGCCTAC
ACCGAGCTGAATCAACCCCTAGGTAATTTCCTCCCTCCCTCCCTCCACAT
CTACCCTCCCTTTTTTTCTCCTCTCTCATGTCCACCTGCCCCTCCCTCCC
TCCCTCCTTCCTCCCTCCTTCCTTCACCCCCACACCCAGTGCAACGCGCC
CGCTTTTTGCAACAAGCCGCCGGGGCGGCAGAAGGCGACGACGAGGCTCA
GGTCCACGACGAGGAGTTCTGTGTTGCCCTCGAACACGCCCTCCCCCCCA
CCGGGGGTTGGGGCTGCGGCGTGGACCGTCTGACCATGTTTCTCTCGGAC
AAGCATAATATCAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCCTGAACT
TGGCTCGGCAGGTGCCACTGCTGCTGCTGCGGCGGCTGCTGCTGCTGCGA
CAGCTGCTGCTTCTCCTGGGTCTGGGGGAGCGGCGACGGTGAGTTTTGCA
GCAGTAGTGCCTCCTTCCTCCCTCGCGCCGTGGAGAGGGTTGGACGTGGG
TTCGGTTGAGGGAATGAAGAAATTGACGGCCGCATTGAGTGGTGAGAGCT
TCCTGGGAGGGAAAGAAGGGCCTGGGCAGGTCGATGCACAGCTTTTTGAA
GTATTGAAGGCAGGGATGGAGGGTGGGAAGGAGGGAGGGGTGAGCTCGCA
GGCACTGCCGCCCGCGGTGAGGAGGTGGTTCCAAACGGTAGCGCAGTTTG
TCCCGGGGGTGCGGGCAAGTTGGAAGTAGGCCAGGTGGGAGGTAGGGATG
GGCTGCATGAGATATATTTATGGAAGGCGAAAATGAAGGGGAAGGTGGTT
CAGGGAGGGAGGGAGGAGTGAGGCGAGCATTCGCGCATAGGAAAAAAGGG
AAGGGAAAGAGAATACAGAGAGGGGGGCATCCAAGTAAGGAAGGAAAAAA
AAGCGATCAAGATCAAGATTGAAAAAAGACGTTTTGTCGATCAGAGACGG
CGGGAAGACGCAACAAGTACTCGCATGCGTTAATCCCCCATTAAAACTTG
GCTTTGTCTTTGTTGTTGTTTTTGTTGTCATTGCGTAATACTTGCTCTTC
CTTTAATCGTCTTCTTCTTCCTTTCCTTCTTCTTGTCAGATTTCTTTTGC
TCAATTCCTACCATGACGCTGTACCATATTTGCACAGCCTTAACCCTAAT
CAATTATATTCACAAACGAACATTACTCGACATCTTTCTTTTTCAAATGC
TCCTCTTCCCCCTCCTCCTCCTCCTCCTCCTCTTGCTTCTATACCCCCTC
TTCCTCTCTCCCTCTCTTTATTCAAAATCCACCTACCAACGGCAACACAG
CCGCGAACGCCTTCTCCTCCATCCTTCTCCGCTCCTCTTCCTCCCCCTCC
TCCTCCTCTTCCTCCTCCTCTTCTTCCTCCCCTTCCTTCACGCCCCTCGC
CCTCACAAATGTCATTGGCTCCCCCTTCCTCTCCCACCACCTCCCTCCCT
CCCTCCCTCCTCCATGTTTCGCCTGTCGATAGAAGACAGCTAGACGGTCC
GGTTCCACCTTTAAATGCCACCCCAGAATTACGCACTGGTTGATGAGCGT
CGTCCGGAGTACCCCCACCCTCTCCCACCTCCTCCCTGACGTCCGCACAC
AACTCGGCAACAACTCGATTCTGCCCCCGTACATCCCTCCATCTCCCCTC
CCCTCCCTCCCTCCCTTCTTCCCCCCCTTCCTCCGACTCCTCGGCTTGGG
AGGGGGCGGCCTCTTGGCCAGCACCCGCAATGCTTGGACGAAGGAGTAGT
CTTCCATGATTGGCACGTCAGGGAAGCCTCCCAATACATCAAATACCTTC
CTCCGGACAGCCAAGGCCTGATCGCCGTAGGGCATGGACCAGGGCCAGGA
GCTACGCGCAGTGATGCTCGCTTCGATGACACGGTAGAAGGGGCGTCGGC
CCATAATTTTAAGCTTGAAGGCAGTGGCAAGGATGGTGGGGTCGCCGGCA
AAGGCCCCTCGAACATCGTCTTCCCAGGTGGGGGGAAGGAGGGTGTCGCC
GTGAAGGAAGAGGAGGATGTCGCCTGCTGCTTCTGCGGCACCGAGATTCA
ATTGAGCGGCGCGGTTGGCGAGAGGGGATTGGACAAGGCGGGCACCGAGG
GCTAGCGCGAGACGTTGGGTGCCGTCAGTGGAGCCGCCGTCCACGACAAT
GACTTCGAGATTTGGATCGTGGATTTTGAGGCCGTTTTTCCTTACATGTT
TGGGCGTTGGAGTGGTGGGAAGGGAGGGAGGGAGGGGGTTGGGCG

Coding sequence (CDS) from alignment at chr25:390731..396825+

>NO25G01390.2 ID=NO25G01390.2|Name=NO25G01390.2|organism=Nannochloropsis oceanica|type=CDS|length=2202bp|location=Sequence derived from alignment at chr25:390731..396825+ (Nannochloropsis oceanica)
ATGGCCGACGAGACAACGGCCAATGGGGGCGAGCCCATGAGCAAGAGTGC
GCTCAAGAAGAAAATGAAGGCGGAAGCCCTCGCCAAGGCCAAGGCCGAAA
AGAAGGCCGCTGCCCCTCCCCCCTCTCAACGCGCCAAGAAAGTAGCCAAC
GGTGGGGAGGAGGAAGAGGAGCTTACCCCGTCGCAGTATTTTGAAGCACG
CTTGCGGATGGTTGCAGAGCTGGAGGCGAGCGGGACGAGTGCGTACCCGC
ACAAGTATCACACAACGCAGAGCATTCCAGACTTTGTGCAGGCGTACCAA
GGGCTAGAGCCAGGGACAAAGCAAGAGGGCGTGACCGTATCTCTAGCGGG
GCGTGTGTCGCGTCGGGCCATTCAAGGCAAGCTTTATTTTTACGACGTGA
CGGCTGATGGGGCCAAGTTCCAAGTGATGACAGACCCCAGATCCTACGCC
GGAGGGGAAGACGCCTTCTGGAAGGTTACGTCTTACATTCGACGGGGGGA
CATCGTTGGGGTGAGCGGCCACCCGGGGAAGAGCAAAAAAGGCGAGCTCT
CCATCTTTGCCAAGGAGCTGACGTTGCTGTCTCCCTGCTTGCAGATGCTT
CCCAAGGGTTATACGGGTTTGAAGAACCAGGAGGTGCGCTATCGGCAGCG
CTACCTGGACCTCATCCTCAACAGTGAGACACGGCGGGTGTTTTATATCC
GAGCCCAGATCATTAATTACATTCGACGGTTTTTGGATACGCAGGGGTTC
CTGGAAGTGGAGACACCCATGATGAACATGATTGCCGGAGGAGCCACGGC
CAAGCCATTCATAACCTACCACAACGATCTGGACCTAAGGATGTTCATGC
GCATTGCCCCCGAGCTCTATCTCAAGGCGAGGGAGGAGGGAAGGAGGGAA
GGAGGGAGGGAGGGAGCACCCGTGTATTCCCTCTCATCACTCCGGCGCAC
CAAACACATCACCCGCCCTCCCTCTCACCCTCCCTTCTTCCCTCCCTCCC
TCCCTCTTCCTACGCAGCAACTGGTGGTTGGGGGCCTCGACCGCGTGTAT
GAAATCGGACGTCAGTTTCGCAACGAGGGGATCGACCTGACCCACAATCC
CGAATTCACGACCTGCGAGTTCTACATGGCCTACGCTGACTACAACGACC
TGATGGACATGACTGAGAAACTCTTCTCCGACATGGTCAAGGAGATCACC
GGAGGCTACGTAATCAAGTACCATCCCGAGGGCCCCGGCGGGACAGAGCT
CACTATCGATTTCTCCCCTCCTTGGAAGCGGATTCCCATGGTCGAGGGGC
TGGAGGAGAAGCTGGGCGTCAAGCTTCCCCCCCTCGATACGGAGGAGGCA
CGCACCGTACTTGAGGCGCTGTGTAAGAAGCACGACGTGGCTTGCTCCAA
TCCGCGGACCGTGCCCCGCCTCCTCGACAAGCTGGTCGGCGAATTCCTGG
AGGAGGACATCATCTCTCCTGCATTCATCACGGAGCACCCGGAGATCATG
AGCCCACTGGCCAAATCCCACAGGACCAAGCCAGGGATGACTGAAAGGTT
CGAGCTGTTCGTGGCCAAGCGGGAGATCGCCAATGCCTACACCGAGCTGA
ATCAACCCCTAGTGCAACGCGCCCGCTTTTTGCAACAAGCCGCCGGGGCG
GCAGAAGGCGACGACGAGGCTCAGGTCCACGACGAGGAGTTCTGTGTTGC
CCTCGAACACGCCCTCCCCCCCACCGGGGGTTGGGGCTGCGGCGTGGACC
GTCTGACCATGTTTCTCTCGGACAAGCATAATATCAAGGAGGTTCTTCTC
TTCCCTGCAATGAAGCCTGAACTTGGCTCGGCAGGTGCCACTGCTGCTGC
TGCGGCGGCTGCTGCTGCTGCGACAGCTGCTGCTTCTCCTGGGTCTGGGG
GAGCGGCGACGGTGAGTTTTGCAGCAGTAGTGCCTCCTTCCTCCCTCGCG
CCGTGGAGAGGGTTGGACGTGGGTTCGGTTGAGGGAATGAAGAAATTGAC
GGCCGCATTGAGTGGTGAGAGCTTCCTGGGAGGGAAAGAAGGGCCTGGGC
AGGTCGATGCACAGCTTTTTGAAGTATTGAAGGCAGGGATGGAGGGTGGG
AAGGAGGGAGGGGTGAGCTCGCAGGCACTGCCGCCCGCGGTGAGGAGGTG
GTTCCAAACGGTAGCGCAGTTTGTCCCGGGGGTGCGGGCAAGTTGGAAGT
AG

Synonyms

Publications