NO25G01230.1, NO25G01230.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G01230.1
Unique NameNO25G01230.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1570
Alignment locationchr25:340496..342065 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:340496..342065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO25G01230.1 vs.
Match: EWM21582.1 (plasma glutamate carboxypeptidase [Nannochloropsis gaditana])

HSP 1 Score: 672.2 bits (1733), Expect = 1.200e-189
Identity = 332/475 (69.89%), Postives = 385/475 (81.05%), Query Frame = 0 
Query:   10 AKPNPSDYTIEARSIIRSLLPGGSCAGQAWDKLAALTDTVGNRICGSPNLERAVDYMLDAWAGEGLENVHGEEVIVPHWHRGHEECIMLSPRQDYRMQILGLGTSVGTSNGEPLEADVVVVTDFDELSSLGQAGKIQGRIVLMNYVCDWTGSPIGCYGVCGKYRSEGASRAAAQGAVAYLVRSLASASIGSPHTGMQRYLPDVTPIRIPAAAVTIEDADALARMQGRGQNISLRLTMECENLPMEKSMNVVAEWKGTEKPEEVVIVSGHLDSWDVGVGAMDDGGGLAISWQALSTLKRLGMRAKRTIRVVGWVGEEFGGYGGRAYFDRHKAEEERVVMVVESDMGVFRPEGMSFSGGERAGEVMKEVMSLLSPINASLLKTDDGRGYETDTGPWEAVGVPGASLSSLNEDYFWFHHSNGDQMGVLKKEDMDLAAAVFAVVAFVVADLDEALPR--EGGVGREEMEEEALKSERLR 483
            AKP+PSDY  EA+SII SLLPGGSCA QAW KLAALTDTVGNR+CGSP+LERA  YML  W  EG +NVHGE V VPHW RG EEC MLSPR  YRMQILGLGTS+GT  G P+EA V+VV +FDEL++ G+AG++QG+IVL+NY CDW+ +P+GCYG C KYR EGASRAA  GAVAYLVRSLASASIGSPHTGMQRY       +IPAAAVT+EDA+ALARMQ RGQ++ LRL+M  +NLP  ++ NVVAEW+G E P+EVV++SGHLDSWDVGVGAMDDGGGL ISWQALSTL+ L  RA+RTIRVVGWVGEEFGG GGR YFD H+  EE+VV+V+ESDMG FRP G+SFSGG  A  VM +V SLL  INA+L+   DG+GYETDT PW+AVGVPGASL S NE YF +HHS+GDQM VL+  DMDLAAAVFAV AFVVADLDEALP+  E G G +   +E  + +R+R
Sbjct:   50 AKPSPSDYATEAQSIINSLLPGGSCADQAWHKLAALTDTVGNRVCGSPSLERASSYMLSVWQAEGFDNVHGENVTVPHWQRGDEECTMLSPRLGYRMQILGLGTSIGTPEGRPIEAHVLVVRNFDELAAFGKAGQVQGKIVLLNYACDWSSNPVGCYGACAKYRGEGASRAARWGAVAYLVRSLASASIGSPHTGMQRYASSKAEDQIPAAAVTVEDAEALARMQARGQDVVLRLSMGAQNLPARQARNVVAEWRGRELPDEVVLLSGHLDSWDVGVGAMDDGGGLVISWQALSTLRALHWRARRTIRVVGWVGEEFGGIGGRQYFDDHR--EEKVVLVIESDMGAFRPRGLSFSGGVDAASVMADVGSLLGGINATLV-ARDGKGYETDTQPWKAVGVPGASLISENERYFAYHHSHGDQMNVLQPGDMDLAAAVFAVTAFVVADLDEALPKGDERGEGEKGKMKEEKERQRMR 521
The following BLAST results are available for this feature:
BLAST of NO25G01230.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21582.11.200e-18969.89plasma glutamate carboxypeptidase [Nannochloropsis... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01230NO25G01230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G01230.1NO25G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G01230.1.cds1NO25G01230.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G01230.1 ID=NO25G01230.1|Name=NO25G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=1570bp
ATGTTCCTACTTCTACCCATGGCAATGGCCAAGCCCAATCCATCGGACTA
CACAATTGAGGCCCGCTCCATCATCCGTAGCCTTTTGCCCGGCGGGTCCT
GTGCAGGACAAGCCTGGGACAAACTTGCAGCCCTTACCGACACCGTGGGA
AATCGTATATGTGGCTCACCTAATCTAGAGCGGGCCGTAGATTACATGCT
GGATGCTTGGGCAGGAGAGGGGCTGGAGAACGTGCATGGGGAGGAAGTGA
TTGTCCCACATTGGCATCGAGGGCACGAGGAATGCATCATGCTCAGCCCT
AGACAGGACTATCGCATGCAAATTCTCGGGTTGGGTACCTCGGTTGGTAC
ATCTAATGGGGAGCCCTTGGAGGCGGATGTGGTGGTAGTCACAGACTTTG
ACGAGCTGTCTTCTCTAGGTCAAGCGGGAAAAATACAAGGGAGAATCGTC
TTGATGAACTATGTCTGTGACTGGACTGGGAGCCCCATTGGGTGTTATGG
TGTCTGTGGGAAATATCGAAGCGAGGGAGCAAGCCGCGCTGCTGCTCAGG
GGGCAGTAGCGTACTTGGTCAGGTCACTGGCGTCGGCCTCGATAGGATCA
CCTCATACGGGCATGCAGAGATACCTGCCTGACGTGACACCGATACGAAT
CCCCGCTGCTGCTGTAACGATTGAAGACGCCGATGCTTTGGCTAGGATGC
AGGGACGAGGGCAGAACATCTCGTTGAGATTGACAATGGAATGCGAGAAT
TTACCCATGGAGAAGTCGATGAATGTGGTAGCGGAGTGGAAAGGCACTGA
GAAACCGGAGGAAGTGGTGATTGTTTCGGGGCATTTGGACTCATGGGATG
TGGGGGTGGGAGCGATGGATGACGGGGGGGGTTTAGCTATCAGTTGGCAG
GCGCTGTCGACGTTAAAGAGGCTCGGCATGAGGGCAAAGAGGACGATAAG
GGTGGTGGGGTGGGTGGGGGAGGAATTTGGAGGGTACGGAGGGAGGGCCT
ATTTTGACCGGCATAAGGCGGAGGAGGAGAGGGTTGTGATGGTGGTGGAG
TCGGACATGGGTGTCTTTCGGCCGGAGGGAATGTCGTTCTCGGGGGGGGA
GAGGGCGGGGGAGGTGATGAAAGAAGTCATGTCGTTGTTGTCGCCGATCA
ACGCGTCGTTGCTAAAAACCGATGATGGAAGGGGGTACGAGACTGATACA
GGGCCTTGGGAGGCAGTGGGGGTGCCGGGAGCGAGCTTAAGCAGTCTGAA
TGAAGACTACTTTTGGTTCCATCATTCCAACGGGGATCAGATGGGGGTGT
TGAAGAAGGAGGACATGGACTTGGCTGCGGCTGTGTTTGCGGTAGTGGCT
TTCGTGGTGGCGGATTTGGACGAGGCGTTGCCGAGGGAGGGAGGGGTAGG
GAGGGAGGAAATGGAGGAGGAGGCGTTAAAGAGCGAGAGGTTGAGGGCTA
TGCGCGCGTGAGGTGCGCATGGCTTGGATATGTAGAAAAGGGAGGAAGTA
TAATGACGATGGTAATTAGAAGAGGGGTAGAGTGTCAGAAATAGCTGAAA
AATAGACTGCATGTATTCAG
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protein sequence of NO25G01230.1

>NO25G01230.1-protein ID=NO25G01230.1-protein|Name=NO25G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MFLLLPMAMAKPNPSDYTIEARSIIRSLLPGGSCAGQAWDKLAALTDTVG
NRICGSPNLERAVDYMLDAWAGEGLENVHGEEVIVPHWHRGHEECIMLSP
RQDYRMQILGLGTSVGTSNGEPLEADVVVVTDFDELSSLGQAGKIQGRIV
LMNYVCDWTGSPIGCYGVCGKYRSEGASRAAAQGAVAYLVRSLASASIGS
PHTGMQRYLPDVTPIRIPAAAVTIEDADALARMQGRGQNISLRLTMECEN
LPMEKSMNVVAEWKGTEKPEEVVIVSGHLDSWDVGVGAMDDGGGLAISWQ
ALSTLKRLGMRAKRTIRVVGWVGEEFGGYGGRAYFDRHKAEEERVVMVVE
SDMGVFRPEGMSFSGGERAGEVMKEVMSLLSPINASLLKTDDGRGYETDT
GPWEAVGVPGASLSSLNEDYFWFHHSNGDQMGVLKKEDMDLAAAVFAVVA
FVVADLDEALPREGGVGREEMEEEALKSERLRAMRA*
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mRNA from alignment at chr25:340496..342065-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G01230.1 ID=NO25G01230.1|Name=NO25G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=1570bp|location=Sequence derived from alignment at chr25:340496..342065- (Nannochloropsis oceanica)
ATGTTCCTACTTCTACCCATGGCAATGGCCAAGCCCAATCCATCGGACTA
CACAATTGAGGCCCGCTCCATCATCCGTAGCCTTTTGCCCGGCGGGTCCT
GTGCAGGACAAGCCTGGGACAAACTTGCAGCCCTTACCGACACCGTGGGA
AATCGTATATGTGGCTCACCTAATCTAGAGCGGGCCGTAGATTACATGCT
GGATGCTTGGGCAGGAGAGGGGCTGGAGAACGTGCATGGGGAGGAAGTGA
TTGTCCCACATTGGCATCGAGGGCACGAGGAATGCATCATGCTCAGCCCT
AGACAGGACTATCGCATGCAAATTCTCGGGTTGGGTACCTCGGTTGGTAC
ATCTAATGGGGAGCCCTTGGAGGCGGATGTGGTGGTAGTCACAGACTTTG
ACGAGCTGTCTTCTCTAGGTCAAGCGGGAAAAATACAAGGGAGAATCGTC
TTGATGAACTATGTCTGTGACTGGACTGGGAGCCCCATTGGGTGTTATGG
TGTCTGTGGGAAATATCGAAGCGAGGGAGCAAGCCGCGCTGCTGCTCAGG
GGGCAGTAGCGTACTTGGTCAGGTCACTGGCGTCGGCCTCGATAGGATCA
CCTCATACGGGCATGCAGAGATACCTGCCTGACGTGACACCGATACGAAT
CCCCGCTGCTGCTGTAACGATTGAAGACGCCGATGCTTTGGCTAGGATGC
AGGGACGAGGGCAGAACATCTCGTTGAGATTGACAATGGAATGCGAGAAT
TTACCCATGGAGAAGTCGATGAATGTGGTAGCGGAGTGGAAAGGCACTGA
GAAACCGGAGGAAGTGGTGATTGTTTCGGGGCATTTGGACTCATGGGATG
TGGGGGTGGGAGCGATGGATGACGGGGGGGGTTTAGCTATCAGTTGGCAG
GCGCTGTCGACGTTAAAGAGGCTCGGCATGAGGGCAAAGAGGACGATAAG
GGTGGTGGGGTGGGTGGGGGAGGAATTTGGAGGGTACGGAGGGAGGGCCT
ATTTTGACCGGCATAAGGCGGAGGAGGAGAGGGTTGTGATGGTGGTGGAG
TCGGACATGGGTGTCTTTCGGCCGGAGGGAATGTCGTTCTCGGGGGGGGA
GAGGGCGGGGGAGGTGATGAAAGAAGTCATGTCGTTGTTGTCGCCGATCA
ACGCGTCGTTGCTAAAAACCGATGATGGAAGGGGGTACGAGACTGATACA
GGGCCTTGGGAGGCAGTGGGGGTGCCGGGAGCGAGCTTAAGCAGTCTGAA
TGAAGACTACTTTTGGTTCCATCATTCCAACGGGGATCAGATGGGGGTGT
TGAAGAAGGAGGACATGGACTTGGCTGCGGCTGTGTTTGCGGTAGTGGCT
TTCGTGGTGGCGGATTTGGACGAGGCGTTGCCGAGGGAGGGAGGGGTAGG
GAGGGAGGAAATGGAGGAGGAGGCGTTAAAGAGCGAGAGGTTGAGGGCTA
TGCGCGCGTGAGGTGCGCATGGCTTGGATATGTAGAAAAGGGAGGAAGTA
TAATGACGATGGTAATTAGAAGAGGGGTAGAGTGTCAGAAATAGCTGAAA
AATAGACTGCATGTATTCAG
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Coding sequence (CDS) from alignment at chr25:340496..342065-

>NO25G01230.1 ID=NO25G01230.1|Name=NO25G01230.1|organism=Nannochloropsis oceanica|type=CDS|length=1461bp|location=Sequence derived from alignment at chr25:340496..342065- (Nannochloropsis oceanica)
ATGTTCCTACTTCTACCCATGGCAATGGCCAAGCCCAATCCATCGGACTA
CACAATTGAGGCCCGCTCCATCATCCGTAGCCTTTTGCCCGGCGGGTCCT
GTGCAGGACAAGCCTGGGACAAACTTGCAGCCCTTACCGACACCGTGGGA
AATCGTATATGTGGCTCACCTAATCTAGAGCGGGCCGTAGATTACATGCT
GGATGCTTGGGCAGGAGAGGGGCTGGAGAACGTGCATGGGGAGGAAGTGA
TTGTCCCACATTGGCATCGAGGGCACGAGGAATGCATCATGCTCAGCCCT
AGACAGGACTATCGCATGCAAATTCTCGGGTTGGGTACCTCGGTTGGTAC
ATCTAATGGGGAGCCCTTGGAGGCGGATGTGGTGGTAGTCACAGACTTTG
ACGAGCTGTCTTCTCTAGGTCAAGCGGGAAAAATACAAGGGAGAATCGTC
TTGATGAACTATGTCTGTGACTGGACTGGGAGCCCCATTGGGTGTTATGG
TGTCTGTGGGAAATATCGAAGCGAGGGAGCAAGCCGCGCTGCTGCTCAGG
GGGCAGTAGCGTACTTGGTCAGGTCACTGGCGTCGGCCTCGATAGGATCA
CCTCATACGGGCATGCAGAGATACCTGCCTGACGTGACACCGATACGAAT
CCCCGCTGCTGCTGTAACGATTGAAGACGCCGATGCTTTGGCTAGGATGC
AGGGACGAGGGCAGAACATCTCGTTGAGATTGACAATGGAATGCGAGAAT
TTACCCATGGAGAAGTCGATGAATGTGGTAGCGGAGTGGAAAGGCACTGA
GAAACCGGAGGAAGTGGTGATTGTTTCGGGGCATTTGGACTCATGGGATG
TGGGGGTGGGAGCGATGGATGACGGGGGGGGTTTAGCTATCAGTTGGCAG
GCGCTGTCGACGTTAAAGAGGCTCGGCATGAGGGCAAAGAGGACGATAAG
GGTGGTGGGGTGGGTGGGGGAGGAATTTGGAGGGTACGGAGGGAGGGCCT
ATTTTGACCGGCATAAGGCGGAGGAGGAGAGGGTTGTGATGGTGGTGGAG
TCGGACATGGGTGTCTTTCGGCCGGAGGGAATGTCGTTCTCGGGGGGGGA
GAGGGCGGGGGAGGTGATGAAAGAAGTCATGTCGTTGTTGTCGCCGATCA
ACGCGTCGTTGCTAAAAACCGATGATGGAAGGGGGTACGAGACTGATACA
GGGCCTTGGGAGGCAGTGGGGGTGCCGGGAGCGAGCTTAAGCAGTCTGAA
TGAAGACTACTTTTGGTTCCATCATTCCAACGGGGATCAGATGGGGGTGT
TGAAGAAGGAGGACATGGACTTGGCTGCGGCTGTGTTTGCGGTAGTGGCT
TTCGTGGTGGCGGATTTGGACGAGGCGTTGCCGAGGGAGGGAGGGGTAGG
GAGGGAGGAAATGGAGGAGGAGGCGTTAAAGAGCGAGAGGTTGAGGGCTA
TGCGCGCGTGA
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Synonyms
Publications