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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr25 | genome | chr25:332278..334362 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO25G01190.1 vs.
Match: EWM21626.1 (serine threonine-protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 655.2 bits (1689), Expect = 2.200e-184 Identity = 323/377 (85.68%), Postives = 345/377 (91.51%), Query Frame = 0
Query: 319 MQIRMFGETAQVLHSKAKPKKITVYTTCEKQLIFLCKQERSGDLRKDARMMEFNGILNRLLQRDAEGRRRKLRLRTYAVVCLNEECGLMEWVPNTACLRGCIVESMRWAAPQAKYLRFNDLRRIVDGMQTTFKDDPAAMAKDFREQILKIYPPTFHHWFLQRFAEPTAWFEARTVFTRSAAVWSAVGHVVGLGDRHGENILIDAARGECVHVDFDCLFDKGLTLARPELVPFRLTPNMVDGMGVTGYEGPYRRVMEVTLAVLREHRLTLLSVLEPFLTDPTVGWDHMRSGPHLPIIDERLRGIYNLRVPPRRPSSSSSS-SKSKQQQQLLLQQQQQQQQQSEVALPLSIPGQVQKLIQEATALENLARMYIGWQSWL 695
MQIRMFG+TA VLHSKAKPKKITVYTTCEKQL FLCKQERSGDLRKDARMMEFNGI+NRLLQRDAEGRRRKLRLRTYAVVCLNEECGLMEWV +TACLRGCIVES R Q+KYLRF+DLRRIV+GMQ + KDDP AMA++FR Q+L +PPT H WF +RFAEPTAW EART+FTRSAAVWSA+GHVVGLGDRHGENILID ARGECVHVDFDCLFDKGLTLARPELVPFRLTPNMVD MGV GYEGP+RRVMEVTL VLREHRLTLLSVLEPFL DPTVGWDHMRSGPHL +IDERLRGIYNLRVP RR SSS+++ SKSKQQQ QQQQQ +QQS+VALPLSIPGQVQKLIQEATALENLARMYIGWQSW+
Sbjct: 517 MQIRMFGDTAYVLHSKAKPKKITVYTTCEKQLTFLCKQERSGDLRKDARMMEFNGIVNRLLQRDAEGRRRKLRLRTYAVVCLNEECGLMEWVTDTACLRGCIVESARGVERQSKYLRFSDLRRIVEGMQASHKDDPTAMAREFRSQVLPFFPPTLHRWFFKRFAEPTAWLEARTIFTRSAAVWSAIGHVVGLGDRHGENILIDTARGECVHVDFDCLFDKGLTLARPELVPFRLTPNMVDAMGVVGYEGPFRRVMEVTLTVLREHRLTLLSVLEPFLADPTVGWDHMRSGPHLSVIDERLRGIYNLRVPARRSSSSTTARSKSKQQQ----QQQQQHRQQSDVALPLSIPGQVQKLIQEATALENLARMYIGWQSWM 889
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO25G01190.1 ID=NO25G01190.1|Name=NO25G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2085bp
ATGCTGGCGGCGACAGAGGATGACTTGCTACATGCTTACTTCAGGCAGGC
ATTAGAGAACTATGCAGTGAGCCTGCAGCATGGCTTGGACAACATCTTTC
AGTCCCTCCCTCGCTTTCTCACGCTTGCTTTTGAAGTGGGCGATATGGCC
GACGTTGCCGCAACTGCTGCAGCTACTGGTGGCTCCACTGCTCGAGCGCG
TACATCTTCCGCTTCGACGCGTGTGACGCCCATGGACAAACTTTTGCAGC
ATTGCTCCTTGATTTTCCGACGGGCCACTCAACACGTAGCCTCATGTGCG
TGGTACACGGCCTTGCCCCAACTGCTGTCGCAACTCGGTAGTTCGGGCTC
GGCAGGGGCAGCAGCAGCTGTCGCAGGAGGAGGGATTGGAAGAGCCGGGG
CGGAGGTGCAGAGTTTAGTGCTGGAGGCCGTTGTGAAAGTGTTGGAGATG
CACCCAGAGCAGGCAATATGGTCGACGACCGGTCTGATATTCTCCCGGGA
TCCCTTCCGGAAGAAAGCTGGCGAGAAGGTCTTGCGATACGCACACACGC
GGTTGTCTGAGTCGGGGTTCACAGATAACGCGCTCATGCTCACAGACAGT
AAGAAACTCTTCTCCGAGCTGCTGGAGCTGGCTAATGACAACAACGAACC
CCCCCCGGATAAGCGTTTGAAGATCCAAATCGGGAAACGCTTGCATTTGA
TGTCCTTTCTGGTCCCTGTCCAGGCAGCGCTGACAGTCAGCTTGCCGAGA
CCGCCGCGGACTCGCAGGAGTATGAGCGTAGGTGGGCCCTTGGGAGGATC
ATGGGGACCGCGAGGGAGTCATGCGGGACGGGGAGGAGGGGGGGGAGGGT
TTCGGGGAGGAGGGGGAGGGGGAGGAGCAGCAGGGGGGTTTATGGCATCG
CAGCGCACATACTTGATGCCAGATGCGTATCACGATGCTTTTCCAAATGC
ACAGATGCAGATTCGAATGTTTGGGGAAACTGCGCAAGTGTTGCATAGCA
AGGCGAAGCCGAAGAAGATCACCGTTTACACGACGTGTGAGAAACAACTC
ATATTTTTGTGCAAGCAGGAACGGAGCGGGGATTTGCGAAAAGATGCACG
CATGATGGAATTCAATGGTATTCTGAATCGACTTCTGCAACGTGATGCGG
AGGGTCGACGGCGGAAGTTACGGTTGCGGACATATGCGGTAGTATGTTTG
AATGAGGAATGTGGGCTGATGGAGTGGGTACCTAACACGGCCTGCCTCCG
GGGCTGTATTGTCGAGTCCATGCGCTGGGCGGCACCGCAGGCCAAGTACT
TGCGATTCAATGACTTGCGCCGGATAGTCGATGGAATGCAAACGACTTTT
AAGGACGACCCGGCAGCGATGGCGAAGGACTTTCGAGAGCAAATTTTGAA
AATCTATCCACCAACATTCCACCATTGGTTCTTGCAGCGTTTTGCCGAGC
CGACGGCGTGGTTCGAGGCGCGCACGGTATTTACACGCTCGGCGGCAGTG
TGGTCGGCCGTGGGACATGTGGTTGGTTTGGGGGATCGGCACGGGGAGAA
CATTTTGATTGACGCGGCGCGGGGAGAGTGTGTCCACGTGGATTTCGACT
GTTTGTTTGATAAAGGCCTCACCTTGGCTCGGCCCGAATTGGTGCCCTTT
CGCTTGACTCCGAACATGGTAGATGGTATGGGCGTCACTGGCTATGAAGG
GCCGTATCGGCGTGTAATGGAGGTGACCCTCGCTGTCCTACGCGAGCATC
GGCTGACGCTGCTGAGTGTGCTGGAACCTTTTTTGACTGATCCGACGGTA
GGCTGGGACCATATGCGCTCAGGGCCACACCTTCCCATTATTGATGAACG
GCTTCGGGGAATTTACAACTTACGGGTTCCCCCTCGCCGGCCGTCTTCTT
CTTCGTCGAGTAGCAAGAGTAAGCAGCAGCAGCAGCTGCTGCTGCAGCAA
CAACAACAACAGCAACAACAGTCTGAGGTGGCGTTGCCATTGTCCATTCC
GGGACAGGTTCAGAAACTCATTCAAGAGGCGACGGCCTTGGAGAATTTGG
CTCGTATGTACATCGGGTGGCAGAGCTGGCTGTAG back to topprotein sequence of NO25G01190.1 >NO25G01190.1-protein ID=NO25G01190.1-protein|Name=NO25G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=695bp
MLAATEDDLLHAYFRQALENYAVSLQHGLDNIFQSLPRFLTLAFEVGDMA
DVAATAAATGGSTARARTSSASTRVTPMDKLLQHCSLIFRRATQHVASCA
WYTALPQLLSQLGSSGSAGAAAAVAGGGIGRAGAEVQSLVLEAVVKVLEM
HPEQAIWSTTGLIFSRDPFRKKAGEKVLRYAHTRLSESGFTDNALMLTDS
KKLFSELLELANDNNEPPPDKRLKIQIGKRLHLMSFLVPVQAALTVSLPR
PPRTRRSMSVGGPLGGSWGPRGSHAGRGGGGGGFRGGGGGGGAAGGFMAS
QRTYLMPDAYHDAFPNAQMQIRMFGETAQVLHSKAKPKKITVYTTCEKQL
IFLCKQERSGDLRKDARMMEFNGILNRLLQRDAEGRRRKLRLRTYAVVCL
NEECGLMEWVPNTACLRGCIVESMRWAAPQAKYLRFNDLRRIVDGMQTTF
KDDPAAMAKDFREQILKIYPPTFHHWFLQRFAEPTAWFEARTVFTRSAAV
WSAVGHVVGLGDRHGENILIDAARGECVHVDFDCLFDKGLTLARPELVPF
RLTPNMVDGMGVTGYEGPYRRVMEVTLAVLREHRLTLLSVLEPFLTDPTV
GWDHMRSGPHLPIIDERLRGIYNLRVPPRRPSSSSSSSKSKQQQQLLLQQ
QQQQQQQSEVALPLSIPGQVQKLIQEATALENLARMYIGWQSWL* back to topmRNA from alignment at chr25:332278..334362+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO25G01190.1 ID=NO25G01190.1|Name=NO25G01190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2085bp|location=Sequence derived from alignment at chr25:332278..334362+ (Nannochloropsis oceanica)
ATGCTGGCGGCGACAGAGGATGACTTGCTACATGCTTACTTCAGGCAGGC
ATTAGAGAACTATGCAGTGAGCCTGCAGCATGGCTTGGACAACATCTTTC
AGTCCCTCCCTCGCTTTCTCACGCTTGCTTTTGAAGTGGGCGATATGGCC
GACGTTGCCGCAACTGCTGCAGCTACTGGTGGCTCCACTGCTCGAGCGCG
TACATCTTCCGCTTCGACGCGTGTGACGCCCATGGACAAACTTTTGCAGC
ATTGCTCCTTGATTTTCCGACGGGCCACTCAACACGTAGCCTCATGTGCG
TGGTACACGGCCTTGCCCCAACTGCTGTCGCAACTCGGTAGTTCGGGCTC
GGCAGGGGCAGCAGCAGCTGTCGCAGGAGGAGGGATTGGAAGAGCCGGGG
CGGAGGTGCAGAGTTTAGTGCTGGAGGCCGTTGTGAAAGTGTTGGAGATG
CACCCAGAGCAGGCAATATGGTCGACGACCGGTCTGATATTCTCCCGGGA
TCCCTTCCGGAAGAAAGCTGGCGAGAAGGTCTTGCGATACGCACACACGC
GGTTGTCTGAGTCGGGGTTCACAGATAACGCGCTCATGCTCACAGACAGT
AAGAAACTCTTCTCCGAGCTGCTGGAGCTGGCTAATGACAACAACGAACC
CCCCCCGGATAAGCGTTTGAAGATCCAAATCGGGAAACGCTTGCATTTGA
TGTCCTTTCTGGTCCCTGTCCAGGCAGCGCTGACAGTCAGCTTGCCGAGA
CCGCCGCGGACTCGCAGGAGTATGAGCGTAGGTGGGCCCTTGGGAGGATC
ATGGGGACCGCGAGGGAGTCATGCGGGACGGGGAGGAGGGGGGGGAGGGT
TTCGGGGAGGAGGGGGAGGGGGAGGAGCAGCAGGGGGGTTTATGGCATCG
CAGCGCACATACTTGATGCCAGATGCGTATCACGATGCTTTTCCAAATGC
ACAGATGCAGATTCGAATGTTTGGGGAAACTGCGCAAGTGTTGCATAGCA
AGGCGAAGCCGAAGAAGATCACCGTTTACACGACGTGTGAGAAACAACTC
ATATTTTTGTGCAAGCAGGAACGGAGCGGGGATTTGCGAAAAGATGCACG
CATGATGGAATTCAATGGTATTCTGAATCGACTTCTGCAACGTGATGCGG
AGGGTCGACGGCGGAAGTTACGGTTGCGGACATATGCGGTAGTATGTTTG
AATGAGGAATGTGGGCTGATGGAGTGGGTACCTAACACGGCCTGCCTCCG
GGGCTGTATTGTCGAGTCCATGCGCTGGGCGGCACCGCAGGCCAAGTACT
TGCGATTCAATGACTTGCGCCGGATAGTCGATGGAATGCAAACGACTTTT
AAGGACGACCCGGCAGCGATGGCGAAGGACTTTCGAGAGCAAATTTTGAA
AATCTATCCACCAACATTCCACCATTGGTTCTTGCAGCGTTTTGCCGAGC
CGACGGCGTGGTTCGAGGCGCGCACGGTATTTACACGCTCGGCGGCAGTG
TGGTCGGCCGTGGGACATGTGGTTGGTTTGGGGGATCGGCACGGGGAGAA
CATTTTGATTGACGCGGCGCGGGGAGAGTGTGTCCACGTGGATTTCGACT
GTTTGTTTGATAAAGGCCTCACCTTGGCTCGGCCCGAATTGGTGCCCTTT
CGCTTGACTCCGAACATGGTAGATGGTATGGGCGTCACTGGCTATGAAGG
GCCGTATCGGCGTGTAATGGAGGTGACCCTCGCTGTCCTACGCGAGCATC
GGCTGACGCTGCTGAGTGTGCTGGAACCTTTTTTGACTGATCCGACGGTA
GGCTGGGACCATATGCGCTCAGGGCCACACCTTCCCATTATTGATGAACG
GCTTCGGGGAATTTACAACTTACGGGTTCCCCCTCGCCGGCCGTCTTCTT
CTTCGTCGAGTAGCAAGAGTAAGCAGCAGCAGCAGCTGCTGCTGCAGCAA
CAACAACAACAGCAACAACAGTCTGAGGTGGCGTTGCCATTGTCCATTCC
GGGACAGGTTCAGAAACTCATTCAAGAGGCGACGGCCTTGGAGAATTTGG
CTCGTATGTACATCGGGTGGCAGAGCTGGCTGTAG back to topCoding sequence (CDS) from alignment at chr25:332278..334362+ >NO25G01190.1 ID=NO25G01190.1|Name=NO25G01190.1|organism=Nannochloropsis oceanica|type=CDS|length=2085bp|location=Sequence derived from alignment at chr25:332278..334362+ (Nannochloropsis oceanica)
ATGCTGGCGGCGACAGAGGATGACTTGCTACATGCTTACTTCAGGCAGGC
ATTAGAGAACTATGCAGTGAGCCTGCAGCATGGCTTGGACAACATCTTTC
AGTCCCTCCCTCGCTTTCTCACGCTTGCTTTTGAAGTGGGCGATATGGCC
GACGTTGCCGCAACTGCTGCAGCTACTGGTGGCTCCACTGCTCGAGCGCG
TACATCTTCCGCTTCGACGCGTGTGACGCCCATGGACAAACTTTTGCAGC
ATTGCTCCTTGATTTTCCGACGGGCCACTCAACACGTAGCCTCATGTGCG
TGGTACACGGCCTTGCCCCAACTGCTGTCGCAACTCGGTAGTTCGGGCTC
GGCAGGGGCAGCAGCAGCTGTCGCAGGAGGAGGGATTGGAAGAGCCGGGG
CGGAGGTGCAGAGTTTAGTGCTGGAGGCCGTTGTGAAAGTGTTGGAGATG
CACCCAGAGCAGGCAATATGGTCGACGACCGGTCTGATATTCTCCCGGGA
TCCCTTCCGGAAGAAAGCTGGCGAGAAGGTCTTGCGATACGCACACACGC
GGTTGTCTGAGTCGGGGTTCACAGATAACGCGCTCATGCTCACAGACAGT
AAGAAACTCTTCTCCGAGCTGCTGGAGCTGGCTAATGACAACAACGAACC
CCCCCCGGATAAGCGTTTGAAGATCCAAATCGGGAAACGCTTGCATTTGA
TGTCCTTTCTGGTCCCTGTCCAGGCAGCGCTGACAGTCAGCTTGCCGAGA
CCGCCGCGGACTCGCAGGAGTATGAGCGTAGGTGGGCCCTTGGGAGGATC
ATGGGGACCGCGAGGGAGTCATGCGGGACGGGGAGGAGGGGGGGGAGGGT
TTCGGGGAGGAGGGGGAGGGGGAGGAGCAGCAGGGGGGTTTATGGCATCG
CAGCGCACATACTTGATGCCAGATGCGTATCACGATGCTTTTCCAAATGC
ACAGATGCAGATTCGAATGTTTGGGGAAACTGCGCAAGTGTTGCATAGCA
AGGCGAAGCCGAAGAAGATCACCGTTTACACGACGTGTGAGAAACAACTC
ATATTTTTGTGCAAGCAGGAACGGAGCGGGGATTTGCGAAAAGATGCACG
CATGATGGAATTCAATGGTATTCTGAATCGACTTCTGCAACGTGATGCGG
AGGGTCGACGGCGGAAGTTACGGTTGCGGACATATGCGGTAGTATGTTTG
AATGAGGAATGTGGGCTGATGGAGTGGGTACCTAACACGGCCTGCCTCCG
GGGCTGTATTGTCGAGTCCATGCGCTGGGCGGCACCGCAGGCCAAGTACT
TGCGATTCAATGACTTGCGCCGGATAGTCGATGGAATGCAAACGACTTTT
AAGGACGACCCGGCAGCGATGGCGAAGGACTTTCGAGAGCAAATTTTGAA
AATCTATCCACCAACATTCCACCATTGGTTCTTGCAGCGTTTTGCCGAGC
CGACGGCGTGGTTCGAGGCGCGCACGGTATTTACACGCTCGGCGGCAGTG
TGGTCGGCCGTGGGACATGTGGTTGGTTTGGGGGATCGGCACGGGGAGAA
CATTTTGATTGACGCGGCGCGGGGAGAGTGTGTCCACGTGGATTTCGACT
GTTTGTTTGATAAAGGCCTCACCTTGGCTCGGCCCGAATTGGTGCCCTTT
CGCTTGACTCCGAACATGGTAGATGGTATGGGCGTCACTGGCTATGAAGG
GCCGTATCGGCGTGTAATGGAGGTGACCCTCGCTGTCCTACGCGAGCATC
GGCTGACGCTGCTGAGTGTGCTGGAACCTTTTTTGACTGATCCGACGGTA
GGCTGGGACCATATGCGCTCAGGGCCACACCTTCCCATTATTGATGAACG
GCTTCGGGGAATTTACAACTTACGGGTTCCCCCTCGCCGGCCGTCTTCTT
CTTCGTCGAGTAGCAAGAGTAAGCAGCAGCAGCAGCTGCTGCTGCAGCAA
CAACAACAACAGCAACAACAGTCTGAGGTGGCGTTGCCATTGTCCATTCC
GGGACAGGTTCAGAAACTCATTCAAGAGGCGACGGCCTTGGAGAATTTGG
CTCGTATGTACATCGGGTGGCAGAGCTGGCTGTAG back to top
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