NO25G00960.1, NO25G00960.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G00960.1
Unique NameNO25G00960.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length450
Alignment locationchr25:271532..272071 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:271532..272071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00960.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00960NO25G00960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G00960.1NO25G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G00960.1.cds1NO25G00960.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00960.1.cds2NO25G00960.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G00960.1 ID=NO25G00960.1|Name=NO25G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=450bp
ATGCAACACCTGCTCGACCCCAACACACGCGAGGGCCGCTGCCAGTTCAT
CCCCAACGTCCGCGCTTACAACTCGGTGCTGTCGATGAGCTCGCAAGGAG
CGAAAGTCGAGCCAGCAGTTGCAGGTGGCGTCCAAAATTTTAGTATGGAT
GGACAGGAGCAGCACGACGCACGCCTCGCCCTCATGCCTCCACGGCCCAA
CCGTTCGGTCATCCTCAGACCTGGCACACTTCGGCCACTGCAACAACTCC
TGTGGAGGATCAACACCTTGATCAACGAATTTAGGAACGCGGCAGCGGCT
TCTGCACAGGCAATCGATGAGGCCCGAGAGAATGAAGCACACACCCCTGC
TGATCTCCCAGAAGTCGTCCTCCGCCTCATACCTCAAGGAGAAGACTCCG
CTTTTCGGTGGGGGGGGTTGTACCGACGGGCATCGGCGTCTTTTCCTTGA
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protein sequence of NO25G00960.1

>NO25G00960.1-protein ID=NO25G00960.1-protein|Name=NO25G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MQHLLDPNTREGRCQFIPNVRAYNSVLSMSSQGAKVEPAVAGGVQNFSMD
GQEQHDARLALMPPRPNRSVILRPGTLRPLQQLLWRINTLINEFRNAAAA
SAQAIDEARENEAHTPADLPEVVLRLIPQGEDSAFRWGGLYRRASASFP*
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mRNA from alignment at chr25:271532..272071-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G00960.1 ID=NO25G00960.1|Name=NO25G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=540bp|location=Sequence derived from alignment at chr25:271532..272071- (Nannochloropsis oceanica)
ATGCAACACCTGCTCGACCCCAACACACGCGAGGGCCGCTGCCAGTTCAT
CCCCAACGTCCGCGCTTACAACTCGGTGCTGTCGATGAGCTCGCAAGGAG
CGAAAGTCGAGCCAGCAGTTGCAGGTGGCGTCCAAAATTTTAGTATGGAT
GGACAGGTCTGCCACAAAATGGGGCCTCTGCTACCCGACCACCCACGGGG
CTACACGCCCAGACTTGCGCACCTGTACATAATCGACAACACTTAGGAGC
AGCACGACGCACGCCTCGCCCTCATGCCTCCACGGCCCAACCGTTCGGTC
ATCCTCAGACCTGGCACACTTCGGCCACTGCAACAACTCCTGTGGAGGAT
CAACACCTTGATCAACGAATTTAGGAACGCGGCAGCGGCTTCTGCACAGG
CAATCGATGAGGCCCGAGAGAATGAAGCACACACCCCTGCTGATCTCCCA
GAAGTCGTCCTCCGCCTCATACCTCAAGGAGAAGACTCCGCTTTTCGGTG
GGGGGGGTTGTACCGACGGGCATCGGCGTCTTTTCCTTGA
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Coding sequence (CDS) from alignment at chr25:271532..272071-

>NO25G00960.1 ID=NO25G00960.1|Name=NO25G00960.1|organism=Nannochloropsis oceanica|type=CDS|length=450bp|location=Sequence derived from alignment at chr25:271532..272071- (Nannochloropsis oceanica)
ATGCAACACCTGCTCGACCCCAACACACGCGAGGGCCGCTGCCAGTTCAT
CCCCAACGTCCGCGCTTACAACTCGGTGCTGTCGATGAGCTCGCAAGGAG
CGAAAGTCGAGCCAGCAGTTGCAGGTGGCGTCCAAAATTTTAGTATGGAT
GGACAGGAGCAGCACGACGCACGCCTCGCCCTCATGCCTCCACGGCCCAA
CCGTTCGGTCATCCTCAGACCTGGCACACTTCGGCCACTGCAACAACTCC
TGTGGAGGATCAACACCTTGATCAACGAATTTAGGAACGCGGCAGCGGCT
TCTGCACAGGCAATCGATGAGGCCCGAGAGAATGAAGCACACACCCCTGC
TGATCTCCCAGAAGTCGTCCTCCGCCTCATACCTCAAGGAGAAGACTCCG
CTTTTCGGTGGGGGGGGTTGTACCGACGGGCATCGGCGTCTTTTCCTTGA
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Synonyms
Publications