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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| chr25 | genome | chr25:109905..113611 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO25G00370.1 vs.
Match: EWM27694.1 (ac transferase [Nannochloropsis gaditana]) HSP 1 Score: 521.9 bits (1343), Expect = 2.500e-144 Identity = 245/414 (59.18%), Postives = 296/414 (71.50%), Query Frame = 0
Query: 24 MLFVLLCVARPAAAKEGD-QNPMVYDGGSWHDLDENMVPGESQPYPPVSDSWQQPETSIHVQISSFRDHRCPKTLYNLFTKAKYPDRVHAGVVQQNSEGDVDCLFKYCQLMTKELGQEPKKGNAVPGKSRLDPFVLENCPYVDQIKIMRVSAEEAKGPTYGRYLGSKLIGDEEFCMQTDAHMDFLFEWDTLLLDMWRLTQNEYGVLSTYVPRFEEMGLNANDRWEVPHICRVFFTPGDGMPRNEQAKAAMWLTRPKMTSTWAAGFAFNKCHADKRTPYDPHLPSLFDGEEYSRFARLWTRGYDVYTPHRSVVYHDYNHGPDTSVTSSWSRRGQELQRSRSRLNVLLGYKDAPVARNSTGAHDLMGKWDLGTRRSLAQLIDFTGVDTINREVIHSSCQRLAWVPFERPGEGIDDD 437
+L +LL A A E V+ G W DEN G QPYPP +DSW +TSI V ISSFRD+RCPKTLYNLFTKA PDRV+AGVVQQN+ GDVDCL+ YC+ + +E G P A P + +NCP+ DQ+K++RV AE+AKGPTYGRYLGS L+GDEEFCMQ DAHMDF WD LLDMW L NEYGVL+TYVP +++ +N N R+EVP +CRV +TPG+ M RNEQA +WL +PK+TSTWAAGFAF+KCHAD +TPYDPHLPSLFDGEEYS++ARLWTRGYD YTPHRSVVYHDY HG ++WSR+ +EL+ S RL LLGY A V R + A +++G+WDLG +RSL QLI FTG DT +V +SC +L WVPF+ EG DDD
Sbjct: 26 LLLLLLASASGEAQNENSFGKAAVFMNGRWTQFDENDDAGVPQPYPPKTDSWTLNDTSIMVSISSFRDYRCPKTLYNLFTKAANPDRVYAGVVQQNNAGDVDCLYDYCEKIKEERGIGPDASAADPNLR-----ITQNCPHADQVKMLRVQAEDAKGPTYGRYLGSYLVGDEEFCMQIDAHMDFEDHWDKQLLDMWGLANNEYGVLTTYVPNLDQLHVNLNGRFEVPQVCRVTYTPGEKMVRNEQATNCIWLRKPKLTSTWAAGFAFSKCHADLKTPYDPHLPSLFDGEEYSKYARLWTRGYDTYTPHRSVVYHDYTHGATEKDANAWSRKYRELKHSHERLRTLLGYSGAVVGRETPAAAEMLGRWDLGKKRSLNQLIAFTGADTRETKVDFNSCGKLQWVPFD---EGDDDD 431
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO25G00370.1 ID=NO25G00370.1|Name=NO25G00370.1|organism=Nannochloropsis oceanica|type=mRNA|length=1725bp ATGGCGGCCCTCGATGGTACCGCCCTTCCATTCCCCGTACAAGTAAACAA AATGGACCGGAGAAGATGGATGCTCTTTGTCTTGCTCTGTGTGGCCCGCC CGGCGGCTGCGAAGGAAGGAGACCAGAACCCGATGGTGTACGATGGCGGC TCCTGGCACGATTTAGACGAAAATATGGTGCCCGGAGAATCCCAACCGTA TCCTCCCGTATCGGACTCGTGGCAGCAGCCGGAGACATCCATCCACGTGC AAATCTCCTCCTTCCGGGACCACCGATGCCCCAAGACGCTGTATAATCTT TTCACGAAGGCCAAGTACCCTGACCGCGTGCACGCTGGGGTGGTCCAGCA GAACAGCGAGGGGGACGTTGACTGCCTATTCAAGTACTGTCAGTTGATGA CAAAGGAGCTTGGCCAGGAACCCAAAAAAGGAAATGCCGTGCCCGGCAAG AGCCGCCTGGACCCGTTTGTACTGGAGAACTGTCCATATGTGGACCAAAT CAAGATCATGCGCGTGTCGGCCGAAGAGGCCAAGGGCCCCACCTATGGCC GGTACCTCGGCTCAAAGCTGATAGGGGATGAGGAATTCTGCATGCAGACC GACGCGCACATGGATTTCCTGTTTGAGTGGGACACGCTGCTGCTGGACAT GTGGAGGCTGACCCAGAACGAGTACGGGGTGCTCTCCACCTATGTCCCTC GCTTCGAGGAGATGGGCCTCAACGCGAACGATCGATGGGAGGTGCCGCAC ATCTGCCGGGTCTTCTTCACCCCGGGAGACGGCATGCCGCGCAACGAGCA AGCGAAGGCTGCCATGTGGCTCACGCGCCCCAAGATGACCAGCACTTGGG CCGCAGGCTTTGCTTTTAATAAGTGCCACGCCGACAAGCGCACCCCATAC GACCCTCACTTACCCTCGCTCTTCGACGGGGAGGAATATTCACGGTTCGC CCGTCTCTGGACACGGGGTTATGATGTGTACACACCACACCGGTCCGTCG TTTATCACGACTACAACCACGGCCCTGACACCTCCGTCACCTCATCCTGG TCTCGCAGGGGCCAGGAGCTGCAGCGCTCACGGAGTAGGCTGAATGTGCT GCTAGGCTACAAAGACGCCCCCGTTGCTCGCAACAGCACCGGGGCCCACG ACTTGATGGGAAAGTGGGACCTGGGCACACGCCGCAGCCTCGCACAGCTG ATTGACTTCACGGGTGTTGACACCATCAACCGCGAGGTGATCCACTCGTC ATGCCAGCGCTTGGCTTGGGTGCCCTTTGAGCGGCCTGGCGAGGGTATCG ACGACGACATAGACCCCTTCCACGCTCAGCGTCTGTTGGGGGAGAGGCAG CAAGGACAGCTGGAGGAGAATAGCAGACTCACTCCGGCCATGTGGAAGAG CTGGAGTGCGAAGACTGCCCCCTGGACCATTACAATTCTGTGGCTGGCGG TGGCTGTCCTGGTGGGTGTTTTTGTCAAGCGCCAGCGGGTCGCCACCTCC TCCTCTTTTTTGCCCTCCTCTTCCCCCTCCTCCTCCTCCCACAACAGCAG TAGAAGAGCCCTCGCCTCCCTCCACCCGCATGGAGGAGGGCCGAGAGGAG GCCTGTTTGCCGCTCCACTTGCCAATTTCCCCGTTCATTCCTCAGCCGTT ACCGCGCACCGGTATTTCGATGGAGGGAAAGGGGAGGCTGGAGGAGGACG TATAGTTCATCAGATGGATGTGTAA back to topprotein sequence of NO25G00370.1 >NO25G00370.1-protein ID=NO25G00370.1-protein|Name=NO25G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp MAALDGTALPFPVQVNKMDRRRWMLFVLLCVARPAAAKEGDQNPMVYDGG SWHDLDENMVPGESQPYPPVSDSWQQPETSIHVQISSFRDHRCPKTLYNL FTKAKYPDRVHAGVVQQNSEGDVDCLFKYCQLMTKELGQEPKKGNAVPGK SRLDPFVLENCPYVDQIKIMRVSAEEAKGPTYGRYLGSKLIGDEEFCMQT DAHMDFLFEWDTLLLDMWRLTQNEYGVLSTYVPRFEEMGLNANDRWEVPH ICRVFFTPGDGMPRNEQAKAAMWLTRPKMTSTWAAGFAFNKCHADKRTPY DPHLPSLFDGEEYSRFARLWTRGYDVYTPHRSVVYHDYNHGPDTSVTSSW SRRGQELQRSRSRLNVLLGYKDAPVARNSTGAHDLMGKWDLGTRRSLAQL IDFTGVDTINREVIHSSCQRLAWVPFERPGEGIDDDIDPFHAQRLLGERQ QGQLEENSRLTPAMWKSWSAKTAPWTITILWLAVAVLVGVFVKRQRVATS SSFLPSSSPSSSSHNSSRRALASLHPHGGGPRGGLFAAPLANFPVHSSAV TAHRYFDGGKGEAGGGRIVHQMDV* back to topmRNA from alignment at chr25:109905..113611- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO25G00370.1 ID=NO25G00370.1|Name=NO25G00370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3707bp|location=Sequence derived from alignment at chr25:109905..113611- (Nannochloropsis oceanica) ATGGCGGCCCTCGATGGTACCGCCCTTCCATTCCCCGTACAAGTGAGGAC
CGGAATTTGCTTCTGTACCTTCTACTATGGTGAATGAAGACACAAATTAC
ACGTGTACGCTTTTCCCCCGTCCCCTCAACCCTCCAGGTAAACAAAATGG
ACCGGAGAAGATGGATGCTCTTTGTCTTGCTCTGTGTGGCCCGCCCGGCG
GCTGCGAAGGAAGGAGACCAGAACCCGATGGTAGGTAATACATTAGTGTG
TATGTGTCACTTTCTCAACATGGGCATGTTCGAAAATGTACCGATCTCTT
TCTTTGCTGCAAGCTGTCCTGATAAAGCTGTCCTGATAAGCTGACACATT
CTTCACCCACGAAAACTTCGACCATGCCTGAAGGTGTACGATGGCGGCTC
CTGGCACGATTTAGACGAAAATATGGTGCCCGGAGAATCCCAACCGTAAG
TACATTTCCCAAAGCTTCATTTGCAATCTTCTCCCCTTACCACCAATACT
CTTGCCATCCTCCAGGTATCCTCCCGTATCGGACTCGTGGCAGCAGCCGG
AGACATCCATCCACGTGCAAATCTCCTCCTTCCGGGACCACCGATGCCCC
AAGTGAGTGCCGACATCTCGTCTTGGGAGGTTTCAGAGAAAAATAGAGGT
GATTGCCTACACTCAAACTACCTTGCCGCACAAAGTCGCCTCCCGCGTAC
TCACTTTTCGCTCCTGTCGTCACTCCCCCCTCAGGACGCTGTATAATCTT
TTCACGAAGGCCAAGTACCCTGACCGCGTGCACGCTGGGGTGGTCCAGCA
GAACAGCGAGGGGGACGTTGGTGAGAGAGATGGAAAAGGGAGGGATTGAA
GGAAGAATAGAGATTGTGACTCCTGGCCCAATCCTCTTGAATTAAAATTC
ATCCGTGTTCAAATTGGTCCATTTTCAAATTTATGCATTTTTTCGTAGAC
TGCCTATTCAAGTACTGTCAGTTGATGACAAAGGAGCTTGGCCAGGAACC
CAAAAAAGGAAATGCCGTGCCCGGCAAGAGCCGCCTGGTACGTAAAGCGG
GGTGAGAAGACGTCAGGGAGGGAACGCTGGCAGGAGGGATGGGTGGCGCA
CGTATGTGCCCTGGTGGCACTTGGAATGATCTTTCTTGCCTGTCGTTCAC
TTTCCTCTATCTGACTTCCTTCTCTCTGACATAGGACCCGTTTGTACTGG
AGAACTGTCCATATGTGGACCAAATCAAGATCATGCGCGTGTCGGCCGAA
GAGGCCAAGGGCCCCACCTATGGCCGGTGAGGAAAAAGAGGGCAGGGAGG
AGGGGGTACTGGACGAGATGTCTGAACCTGAGTTTCGAAGCACGGAAAAG
GTGGCAATGATGCACTTGCCCAGCACACACTTCACTCGCGTGTCAATTCA
GGTACCTCGGCTCAAAGCTGATAGGGGATGAGGAATTCTGCATGCAGACC
GACGCGCACATGGATGTAAGTAAATGCACGTCCGCCCGTTCCTACTCTTC
CCTTCTTGTCTCCCTCCCTCACTTTTAGTCGTTCCTTCCTTCCATTCCAT
TTCCCCCCGCTCCGACTCCACAGTTCCTGTTTGAGTGGGACACGCTGCTG
CTGGACATGTGGAGGCTGACCCAGAACGAGTACGGGGTGCTCTCCACCTA
TGTCCCTCGCTTCGAGGAGATGGGCCTCAACGCGAACGATCGATGGGAGG
TGCGTGCAGAGAGGGAGGAGAGAGAGGAGAGGAACGGCAGGAATCAAGGC
CGCGACGTGTCTATTAATATCTCTGTTCTTTTCACCACTCTCCCCCTCAA
TAAATCCTCTCCTGTCGCGGCGAATGTGCAGGTGCCGCACATCTGCCGGG
TCTTCTTCACCCCGGGAGACGGCATGCCGCGCAACGAGCAAGCGAAGGCT
GCCATGTGGCTCACGCGGTACGTCCGGAGGCAAAGGAGGAGGAAAGGTCC
GGAGGTAATGGAGTAGGAAAGGAATGATGACGAACCAGAAAGCGAAAGCC
CTCTTGTCATGGCTCGCCCTTCATTCGTTCCTCTTATCGCTCCCGCCCCA
CACATTCGACCTCACTTCCAACAGCCCCAAGATGACCAGCACTTGGGCCG
CAGGCTTTGCTTTTAATAAGGTAAAAGGCAGACAGCGAGAACTCAGCGAG
TCAACCACAGAGGAAAAAGAAAAGGGAATGCCCGCCTGTAAGCAGCCCGC
CTCTTCCTCTCTCAATTTTCCTCCCTACCTCGCGTCCCTCCACTAGTGCC
ACGCCGACAAGCGCACCCCATACGACCCTCACTTACCCTCGCTCTTCGAC
GGGGAGGAATATTCACGGTTCGCCCGTCTCTGGACACGGTAAGGCCGAAG
AAAGAGGGAAGGGCGGAAGTGGGGAGGGAGGGAGGAAAAGGTCTTGACTC
ACACTCACGCACGTGTGCCCTCCTCCCTTTGTGGCACCTTTCCACGCACT
CACTCGACACCTACCTGACACCCGCACAAATATTTCACATCAACAAATCC
TTTCTCTCTGGTGCAGGGGTTATGATGTGTACACACCACACCGGTCCGTC
GTTTATCACGACTACAACCACGGCCCTGACACCTCCGTCACCTCATCCTG
GTCTCGCAGGGGCCAGGAGCTGCAGGTAGGGGGGCTTGGCGAAGTGAAGA
AAGAGGAGCAAGAGTAAAGAAGGAGGAACGAGGAAGAAGGAGGTGGAATT
ACTGCAAGATCTGCCGTCTACCTCTAATTTTCCATATTCGCTATCTCTGC
ACCTCCCCCAGCGCTCACGGAGTAGGCTGAATGTGCTGCTAGGCTACAAA
GACGCCCCCGTTGCTCGCAACAGCACCGGGGCCCACGACTTGATGGGAAA
GTGGGACCTGGGCACACGCCGCAGCCTCGCACAGCTGATTGACTTCACGG
GTGTTGACACCATCAACCGCGAGGTGGGCGAGGGGGAGAAAGGAAAAGGA
GGGAGAAAGGAGGTGGTCTTCCAGGCCCTCCATGCCATGGCTGCACACTT
CCTCTACAGACTCTCATTCATTCTCTCTTATCTCACGCAGGTGATCCACT
CGTCATGCCAGCGCTTGGCTTGGGTGCCCTTTGAGCGGCCTGGCGAGGGT
ATCGACGACGACATAGACCCCTTCCACGCTCAGCGTCTGTTGGGGGAGAG
GCAGCAAGGACAGCTGGAGGAGAATAGCAGACTCACTCCGGCCATGTGGA
AGAGCTGGAGTGCGAAGGTAAAATTGCGGGATGATTACTGGGAGACACTG
GTATCACTGTGGGAAATTCTAGTCTTTTGTGCCGCGGCAGCATGCTGTGT
CTTCCACCAGCCCCCCTCGTGTCCCCCCTGTGAACGATCTCTCACGACCG
ACTCCACACTTTTGGCCCTCGTCCCTCCAATTCCCTCTTCTTCAGACTGC
CCCCTGGACCATTACAATTCTGTGGCTGGCGGTGGCTGTCCTGGTGGGTG
TTTTTGTCAAGCGCCAGCGGGTCGCCACCTCCTCCTCTTTTTTGCCCTCC
TCTTCCCCCTCCTCCTCCTCCCACAACAGCAGTAGAAGAGCCCTCGCCTC
CCTCCACCCGCATGGAGGAGGGCCGAGAGGAGGCCTGTTTGCCGCTCCAC
TTGCCAATTTCCCCGTTCATTCCTCAGCCGTTACCGCGCACCGGTATTTC
GATGGAGGGAAAGGGGAGGCTGGAGGAGGACGTATAGTTCATCAGATGGA
TGTGTAA back to topCoding sequence (CDS) from alignment at chr25:109905..113611- >NO25G00370.1 ID=NO25G00370.1|Name=NO25G00370.1|organism=Nannochloropsis oceanica|type=CDS|length=1725bp|location=Sequence derived from alignment at chr25:109905..113611- (Nannochloropsis oceanica) ATGGCGGCCCTCGATGGTACCGCCCTTCCATTCCCCGTACAAGTAAACAA AATGGACCGGAGAAGATGGATGCTCTTTGTCTTGCTCTGTGTGGCCCGCC CGGCGGCTGCGAAGGAAGGAGACCAGAACCCGATGGTGTACGATGGCGGC TCCTGGCACGATTTAGACGAAAATATGGTGCCCGGAGAATCCCAACCGTA TCCTCCCGTATCGGACTCGTGGCAGCAGCCGGAGACATCCATCCACGTGC AAATCTCCTCCTTCCGGGACCACCGATGCCCCAAGACGCTGTATAATCTT TTCACGAAGGCCAAGTACCCTGACCGCGTGCACGCTGGGGTGGTCCAGCA GAACAGCGAGGGGGACGTTGACTGCCTATTCAAGTACTGTCAGTTGATGA CAAAGGAGCTTGGCCAGGAACCCAAAAAAGGAAATGCCGTGCCCGGCAAG AGCCGCCTGGACCCGTTTGTACTGGAGAACTGTCCATATGTGGACCAAAT CAAGATCATGCGCGTGTCGGCCGAAGAGGCCAAGGGCCCCACCTATGGCC GGTACCTCGGCTCAAAGCTGATAGGGGATGAGGAATTCTGCATGCAGACC GACGCGCACATGGATTTCCTGTTTGAGTGGGACACGCTGCTGCTGGACAT GTGGAGGCTGACCCAGAACGAGTACGGGGTGCTCTCCACCTATGTCCCTC GCTTCGAGGAGATGGGCCTCAACGCGAACGATCGATGGGAGGTGCCGCAC ATCTGCCGGGTCTTCTTCACCCCGGGAGACGGCATGCCGCGCAACGAGCA AGCGAAGGCTGCCATGTGGCTCACGCGCCCCAAGATGACCAGCACTTGGG CCGCAGGCTTTGCTTTTAATAAGTGCCACGCCGACAAGCGCACCCCATAC GACCCTCACTTACCCTCGCTCTTCGACGGGGAGGAATATTCACGGTTCGC CCGTCTCTGGACACGGGGTTATGATGTGTACACACCACACCGGTCCGTCG TTTATCACGACTACAACCACGGCCCTGACACCTCCGTCACCTCATCCTGG TCTCGCAGGGGCCAGGAGCTGCAGCGCTCACGGAGTAGGCTGAATGTGCT GCTAGGCTACAAAGACGCCCCCGTTGCTCGCAACAGCACCGGGGCCCACG ACTTGATGGGAAAGTGGGACCTGGGCACACGCCGCAGCCTCGCACAGCTG ATTGACTTCACGGGTGTTGACACCATCAACCGCGAGGTGATCCACTCGTC ATGCCAGCGCTTGGCTTGGGTGCCCTTTGAGCGGCCTGGCGAGGGTATCG ACGACGACATAGACCCCTTCCACGCTCAGCGTCTGTTGGGGGAGAGGCAG CAAGGACAGCTGGAGGAGAATAGCAGACTCACTCCGGCCATGTGGAAGAG CTGGAGTGCGAAGACTGCCCCCTGGACCATTACAATTCTGTGGCTGGCGG TGGCTGTCCTGGTGGGTGTTTTTGTCAAGCGCCAGCGGGTCGCCACCTCC TCCTCTTTTTTGCCCTCCTCTTCCCCCTCCTCCTCCTCCCACAACAGCAG TAGAAGAGCCCTCGCCTCCCTCCACCCGCATGGAGGAGGGCCGAGAGGAG GCCTGTTTGCCGCTCCACTTGCCAATTTCCCCGTTCATTCCTCAGCCGTT ACCGCGCACCGGTATTTCGATGGAGGGAAAGGGGAGGCTGGAGGAGGACG TATAGTTCATCAGATGGATGTGTAA back to top
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