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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr25 | genome | chr25:47677..51217 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO25G00210.1 vs.
Match: XP_009528949.1 (hypothetical protein PHYSODRAFT_315654 [Phytophthora sojae]; EGZ15200.1 hypothetical protein PHYSODRAFT_315654 [Phytophthora sojae]) HSP 1 Score: 296.2 bits (757), Expect = 1.800e-76 Identity = 160/340 (47.06%), Postives = 234/340 (68.82%), Query Frame = 0
Query: 6 AANDAPLLLGRGDLHHTASTASSSSFRPDGSVAMALASVATAISLSISLFCIYKHLTNYSVPRIQRYIIRILFVSPVYALGSLFSLRFPEASVGLETVRDMMEAFVIYSFLALVLEYAGGDATCLNRIKNEPPLRHLFPLC-CLSPMPRDGRFLRVCKQGTLQFVFIKPFMAAVSLIVTSKGLFWSRGYQASLLLIYNVSYSVALYCLALFYLGLKDILKSFSPIAKFLAVKAVVFATYWQSLLLLLWAGEANAS--RWNNFILCLEMVPFSVFLGLAFSHKEYRQS---LPDNIDVLHNMKEVLSVRDVVADAYHNFMPTYQEYTLHRPQGAGGRSSER 340
A N++ L+LG H + + ++++ LA ++ +S + I +HL +YS P++QRYI+RIL V PVYALGSL SL F ++ +++RD EAFV+YSFLALVL +AGG++ C+ ++++EP +RH +PL C P+ RDGR LR+CK+ T+QFVFIKP AA+SL++ + G + + YQ L+++YN+SYSVALY L LFYL + IL+ F+P+ KF AVK+VVF T+WQ+ LL G N W +FILC+EMVPF+ LAF+ +++++ LPD+ +VL+NMKEVLS+ D++ADAYHNFMP+Y++Y L R GG S+ R
Sbjct: 7 AINESSLMLGNATGHAQVLGLPLNWVETNRALSLLLAFACCVVATLLSAYNIVQHLAHYSRPQLQRYIVRILVVVPVYALGSLLSLTFVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCFEPVGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSVALYGLWLFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVPFAFVHLLAFNSSQFKKNLDRLPDS-EVLNNMKEVLSLSDILADAYHNFMPSYRDYMLQR----GGESTGR 341
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO25G00210.1 ID=NO25G00210.1|Name=NO25G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1644bp
ACAGACACAAACCCAGATACAACGACGCATCCCTCCACGTCCAGGGATTA
TAGAGGAATCAAGCGCTGAGTCAAGCGCGCGGGCGCGGTCATGCTTTCTG
CTGCCGCTGCCAATGACGCTCCTCTCCTCCTGGGCCGGGGAGATCTCCAC
CATACTGCTTCCACCGCCTCCTCTTCCTCTTTCCGACCTGACGGCTCGGT
AGCCATGGCCCTAGCTAGTGTAGCGACGGCGATCTCGTTGTCCATATCTC
TGTTTTGCATCTACAAGCACTTGACTAATTACAGCGTGCCAAGAATACAG
CGCTATATTATTCGCATCCTTTTCGTCTCCCCTGTCTACGCGCTGGGGTC
TCTGTTTTCCTTGCGGTTCCCGGAGGCGAGCGTGGGCCTGGAGACGGTAC
GCGACATGATGGAGGCCTTTGTCATTTACTCGTTCCTGGCCCTGGTGTTG
GAGTATGCGGGGGGTGATGCCACGTGCTTGAACAGAATCAAGAATGAGCC
CCCCCTGCGGCACCTCTTCCCTCTCTGTTGCCTCAGCCCCATGCCGCGCG
ACGGTCGCTTCTTGCGCGTGTGCAAACAAGGCACGCTCCAGTTCGTCTTC
ATTAAGCCCTTCATGGCCGCCGTCTCCCTCATCGTTACTAGCAAGGGGCT
CTTCTGGTCCCGGGGGTACCAGGCCTCCCTCCTACTCATCTACAACGTTT
CCTATTCCGTCGCCCTCTATTGCCTCGCGCTCTTCTACCTCGGTCTCAAA
GATATCCTAAAATCCTTCTCTCCCATCGCCAAATTTCTCGCTGTCAAGGC
CGTCGTCTTCGCCACCTACTGGCAATCCCTCCTCCTCCTCCTATGGGCCG
GGGAGGCCAACGCTAGCCGTTGGAACAACTTCATTCTCTGCCTTGAGATG
GTGCCCTTCTCGGTCTTCTTGGGCCTGGCCTTCTCCCACAAGGAGTACCG
CCAGTCCCTCCCCGATAATATCGACGTGCTCCACAACATGAAGGAAGTGC
TCAGTGTCAGGGACGTGGTCGCTGACGCCTACCACAACTTTATGCCAACC
TATCAGGAATACACTCTACACAGACCCCAAGGCGCCGGTGGCCGCAGCAG
CGAACGCAAGTACCGTGCGCACACTTTCCTGGCAGGTAATATTGATGCCC
TCCGTCTCCGGGACCACGACGGGGGGCTGGAGGGAGGGAGGGAGGGAGAA
GAGGAGGGCGGGATGGAGGGCGAGGAGGGCGAGGAGGAAGAGGAGGAAGA
GGAGGTTGAGGTGGAAATAGAAGGGTTGAGTGGGGGGAAGGGAGGGAGGG
TAGAAATGAAGAAGAGAGGATACTCGGCTGCTCCTTCTTCTTCTCCTTCT
CCTGTACGGAAGGTCACTTTTGTGGGGGGGCACGGAGGGAGAGAAGGAGG
GCAAGGGGGAGGAGTGAAGGGAGGAGGGGCGGCGTTGCCGGCGTCGCCGC
TGGAAGGTGGAAGAAGGAAGGAGGGAAAAGTAAACTTCTAGGAAGTCTAG
GAGGGAGGGTGTGTATACAGAGAGTAACATAGACGTGATAGAGTAAATCC
GAGTTTTGGAGGCGACGACAGACAGACCCGACCTCAAGAACGAGAAGAAC
GAGGAAGGAAGAAAAAAAATGGATGGATAGAAGCAGCCATCCAG back to topprotein sequence of NO25G00210.1 >NO25G00210.1-protein ID=NO25G00210.1-protein|Name=NO25G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MLSAAAANDAPLLLGRGDLHHTASTASSSSFRPDGSVAMALASVATAISL
SISLFCIYKHLTNYSVPRIQRYIIRILFVSPVYALGSLFSLRFPEASVGL
ETVRDMMEAFVIYSFLALVLEYAGGDATCLNRIKNEPPLRHLFPLCCLSP
MPRDGRFLRVCKQGTLQFVFIKPFMAAVSLIVTSKGLFWSRGYQASLLLI
YNVSYSVALYCLALFYLGLKDILKSFSPIAKFLAVKAVVFATYWQSLLLL
LWAGEANASRWNNFILCLEMVPFSVFLGLAFSHKEYRQSLPDNIDVLHNM
KEVLSVRDVVADAYHNFMPTYQEYTLHRPQGAGGRSSERKYRAHTFLAGN
IDALRLRDHDGGLEGGREGEEEGGMEGEEGEEEEEEEEVEVEIEGLSGGK
GGRVEMKKRGYSAAPSSSPSPVRKVTFVGGHGGREGGQGGGVKGGGAALP
ASPLEGGRRKEGKVNF* back to topmRNA from alignment at chr25:47677..51217+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO25G00210.1 ID=NO25G00210.1|Name=NO25G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=3541bp|location=Sequence derived from alignment at chr25:47677..51217+ (Nannochloropsis oceanica)
ACAGACACAAACCCAGATACAACGACGCATCCCTCCACGTCCAGGGATTA
TAGAGGAATCAAGCGCTGAGTCAAGCGCGCGGGCGCGGTCATGCTTTCTG
CTGCCGCTGCCAATGACGCTCCTCTCCTCCTGGGCCGGGGAGATCTCCAC
CATACTGCTTCCACCGCCTCCTCTTCCTCTTTCCGACCTGACGGCTCGGT
AGCCATGGCCCTAGCTAGTGTAGCGACGGCGATCTCGTTGTCCATATCTC
TGTTTTGCATCTACAAGCACTTGACTAATTACAGCGTGCCAAGGTATTCG
GGACGCACGGGACGGAGGGAGGGAACGAGGGATGGAGCAAGAATATGCAT
GGGTTGGCGCGGACACGATTCCCTCATCCTCTTGCCCCCTCCCCCCTTTC
CAACCCTCAGAATACAGCGCTATATTATTCGCATCCTTTTCGTCTCCCCT
GTCTACGCGCTGGGGTCTCTGTTTTCCTTGCGGTTCCCGGAGGCGAGCGT
GGGCCTGGAGACGGTGAGGGAGGGAGGGAAGGAAGGAGGGAGGTAGGGAG
AGAGGGAGAGAGGAAGGGAAGAAGGGAAGGAGAGAAGGTGAGGAGGCGGC
GACATCGACGTGTTTGGCATTGATTAGGATACGTGGTCGACTATCAAGGT
GGTATGGCGTTACCAACAAGAAGCGGAAAGATCGATCTCTCCTCTCAGGC
ATGTCTCCCCCCTCCTTCCCTCCCTTCCACCCTCATCTCCTCCCTCCCTC
TCCTTGCCCAGGTACGCGACATGATGGAGGCCTTTGTCATTTACTCGTTC
CTGGCCCTGGTGTTGGAGTATGCGGGGGGTGATGCCACGTGCTTGAACAG
GTGGGTGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGTAGAGAAGGAGG
GGAGGGAGAACTTTGCCTCTGGATAGCATTCTAAGACGGGTATCCTGTGT
CTCATGCTCGTCTTCTGTCCCCTTCTTCCCTCCCTCCCTCCTTCTCTCCC
TCCTTTTCTCGCCCGTAGAATCAAGAATGAGCCCCCCCTGCGGCACCTCT
TCCCTCTCTGTTGCCTCAGCCCCATGCCGCGCGACGGTCGCTTCTTGCGC
GTGTGCAAACAAGGTGAGGGAGGGGGGGAGGGAGGGAGGGAGAAAGGGAG
GGAGGGGGGAGGGCGTGATGAGTGCGTGGGTAGGCGAGAACGACGGAATG
ACGACAAGACTCCTCCTCCCCCTCTCCCTCCCTCCCTCCCTTCCCGCAAG
GCACACTCCAATTTGCCTCCATGAAGCCCTCCATTCACCCCCTTCCCGTC
CTCCCTCCCCCCTCCCGCCTTCCCTTTCCAGGCACGCTCCAGTTCGTCTT
CATTAAGCCCTTCATGGCCGCCGTCTCCCTCATCGTTACTAGCAAGGGGC
TCTTCTGGTCCCGGGGGTACCAGGTGAGGGGGGAGGGAGGGAGGGAGGGG
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCCTCGTGGTCATCTACA
TCATCGTCTTCTCCCTCCCTCCCCGCAGCCAAGACACCCATCTCTCCCCC
TCCCTCCTTCCCTCCCCCTCCGCCTCCTTCCAGGCCTCCCTCCTACTCAT
CTACAACGTTTCCTATTCCGTCGCCCTCTATTGCCTCGCGCTCTTCTACC
TCGGTCTCAAAGATATCCTAAAATCCTTCTCTCCCATCGCCAAATTTCTC
GCTGTCAAGGCCGGTGAGAAAGCAAGCCCGCCCTTTCTCTTTCCCTCCCT
TCCTCAGTCCCTCCCTCCCTCTTTCCTCACTCGTCTCACCCCCACCTCTC
TCCCTCCCTCCCTCCTTCCCGCCTTAGTCGTCTTCGCCACCTACTGGCAA
TCCCTCCTCCTCCTCCTATGGGCCGGGGAGGCCAACGCTAGCCGTTGGAA
CAACTTCATTCTCTGCCTTGAGATGGTGCCCTTCTCGGTCTTCTTGGGTG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGAGCGAGGA
CTACACCCACACACACACCTCTCGTCTTTCTTGCCTCCAGGCCTGGCCTT
GTGCCTATATATGTATGTATATGTAACAATAATATAAAAGTCTTATACAC
CGTAACTTACACTGACCCTGTGTCCAGGCCTGGCCTTCTCCCACAAGGAG
TACCGCCAGTCCCTCCCCGATAATATCGACGTGCTCCACAACATGAAGGA
AGTGCTCAGTGTCAGGTAGGTAGGTAGGTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGCATGCAGTCTTATGAAATGTCGC
TCCTTTGTTTGCATCGTGCGAATCCCACTCCCCCCACTCCCCCCACTCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCACCCTCCCTCCCTCCCACCCTCCC
TTACCGTCTAACTCAGGGACGTGGTCGCTGACGCCTACCACAACTTTATG
CCAACCTATCAGGTGAGCACCCTCCCTCCCTCCCTCCCTCCCTTTCTCCC
TCCCTTCCGCCATCCCTTCAGCAGTCTCTCGCTCTCGAGGGCCTCTTTTC
CTTCTTTCCCTCGCTACACTCCTAGTCTCTCTGCTTCCCTCTCTTCCTTT
CGCTCTTCCTCCCTCTCTTTCTTACTATGTTTTTTCTCCCTCCTACCAGC
ACCACCACTCTCGCTCTTTGCCTTTCTCTCTTGATGTTTCTCGCCCACTC
GAAAGGAGCACACTCTACACAGACACTCCTTCCCACTGACACTCTCCCTT
TCCTTTCTCCCCCTCTCTCTCTCACTCTTGATGTTTCTCGTTCCCTCGAA
AGGAATACACTCTACACAGACCCCAAGGCGCCGGTGGCCGCAGCAGCGGT
ACGTCTTCCTCCTTCCTTTCCTCCTCCCCTCCTTCCTCCCTACCTCCCTA
TACTATCCCCACCCTACCCCTCTACCCTCCCCTATTACGAGAACGCAGAA
CTCACACCTTCTTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGA
ACGCAAGTACCGTGCGCACACTTTCCTGGCAGGTAATATTGATGCCCTCC
GTCTCCGGGACCACGACGGGGGGCTGGAGGGAGGGAGGGAGGGAGAAGAG
GAGGGCGGGATGGAGGGCGAGGAGGGCGAGGAGGAAGAGGAGGAAGAGGA
GGTTGAGGTGGAAATAGAAGGGTTGAGTGGGGGGAAGGGAGGGAGGGTAG
AAATGAAGAAGAGAGGATACTCGGCTGCTCCTTCTTCTTCTCCTTCTCCT
GTACGGAAGGTCACTTTTGTGGGGGGGCACGGAGGGAGAGAAGGAGGGCA
AGGGGGAGGAGTGAAGGGAGGAGGGGCGGCGTTGCCGGCGTCGCCGCTGG
AAGGTGGAAGAAGGAAGGAGGGAAAAGTAAACTTCTAGGAAGTCTAGGAG
GGAGGGTGTGTATACAGAGAGTAACATAGACGTGATAGAGTAAATCCGAG
TTTTGGAGGCGACGACAGACAGACCCGACCTCAAGAACGAGAAGAACGAG
GAAGGAAGAAAAAAAATGGATGGATAGAAGCAGCCATCCAG back to topCoding sequence (CDS) from alignment at chr25:47677..51217+ >NO25G00210.1 ID=NO25G00210.1|Name=NO25G00210.1|organism=Nannochloropsis oceanica|type=CDS|length=1401bp|location=Sequence derived from alignment at chr25:47677..51217+ (Nannochloropsis oceanica)
ATGCTTTCTGCTGCCGCTGCCAATGACGCTCCTCTCCTCCTGGGCCGGGG
AGATCTCCACCATACTGCTTCCACCGCCTCCTCTTCCTCTTTCCGACCTG
ACGGCTCGGTAGCCATGGCCCTAGCTAGTGTAGCGACGGCGATCTCGTTG
TCCATATCTCTGTTTTGCATCTACAAGCACTTGACTAATTACAGCGTGCC
AAGAATACAGCGCTATATTATTCGCATCCTTTTCGTCTCCCCTGTCTACG
CGCTGGGGTCTCTGTTTTCCTTGCGGTTCCCGGAGGCGAGCGTGGGCCTG
GAGACGGTACGCGACATGATGGAGGCCTTTGTCATTTACTCGTTCCTGGC
CCTGGTGTTGGAGTATGCGGGGGGTGATGCCACGTGCTTGAACAGAATCA
AGAATGAGCCCCCCCTGCGGCACCTCTTCCCTCTCTGTTGCCTCAGCCCC
ATGCCGCGCGACGGTCGCTTCTTGCGCGTGTGCAAACAAGGCACGCTCCA
GTTCGTCTTCATTAAGCCCTTCATGGCCGCCGTCTCCCTCATCGTTACTA
GCAAGGGGCTCTTCTGGTCCCGGGGGTACCAGGCCTCCCTCCTACTCATC
TACAACGTTTCCTATTCCGTCGCCCTCTATTGCCTCGCGCTCTTCTACCT
CGGTCTCAAAGATATCCTAAAATCCTTCTCTCCCATCGCCAAATTTCTCG
CTGTCAAGGCCGTCGTCTTCGCCACCTACTGGCAATCCCTCCTCCTCCTC
CTATGGGCCGGGGAGGCCAACGCTAGCCGTTGGAACAACTTCATTCTCTG
CCTTGAGATGGTGCCCTTCTCGGTCTTCTTGGGCCTGGCCTTCTCCCACA
AGGAGTACCGCCAGTCCCTCCCCGATAATATCGACGTGCTCCACAACATG
AAGGAAGTGCTCAGTGTCAGGGACGTGGTCGCTGACGCCTACCACAACTT
TATGCCAACCTATCAGGAATACACTCTACACAGACCCCAAGGCGCCGGTG
GCCGCAGCAGCGAACGCAAGTACCGTGCGCACACTTTCCTGGCAGGTAAT
ATTGATGCCCTCCGTCTCCGGGACCACGACGGGGGGCTGGAGGGAGGGAG
GGAGGGAGAAGAGGAGGGCGGGATGGAGGGCGAGGAGGGCGAGGAGGAAG
AGGAGGAAGAGGAGGTTGAGGTGGAAATAGAAGGGTTGAGTGGGGGGAAG
GGAGGGAGGGTAGAAATGAAGAAGAGAGGATACTCGGCTGCTCCTTCTTC
TTCTCCTTCTCCTGTACGGAAGGTCACTTTTGTGGGGGGGCACGGAGGGA
GAGAAGGAGGGCAAGGGGGAGGAGTGAAGGGAGGAGGGGCGGCGTTGCCG
GCGTCGCCGCTGGAAGGTGGAAGAAGGAAGGAGGGAAAAGTAAACTTCTA
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