NO24G02500.1, NO24G02500.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G02500.1
Unique Name	NO24G02500.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2428
Alignment location	chr24:685897..697475 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:685897..697475 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO24G02500.1 vs.
Match: EWM24463.1 (sulfate transporter [Nannochloropsis gaditana])

HSP 1 Score: 919.5 bits (2375), Expect = 6.500e-264
Identity = 463/637 (72.68%), Postives = 548/637 (86.03%), Query Frame = 0

Query:   27 LNVSTISCGGRKFASDCLGLVSLPYFPWARFKWSTYPLHAPSDVLAGLTVGVMLVPQGMAYAVLSSLPPIYGLYASTIAGYVYSLFGTSGQLTIGPVALVSLFMSETYTKLGIPLAIKDMDPMLNVPAHYHTHVRCEIAAVISLAVALMLCVMAIFRVGSLIKFISPSVLAGFVTGSGVYIFVTQSKHIWGIKLSRDTVQVHELKYLFSHIGTDSNKYSVTIGLTAFFTLWTFTALRKATKSKVRRLRENKAWLANLITVTLSAATLVVIVISTLVSQYLIKSGKSITVIGDIPPGFNTFQFPAIINSFYGVGIPFSKIMVAAIPVTFLTYLESVSVGRKYALVHKYSLDMTQELWALGFGCLFASFFQGYPPGGSFSRTALKHEVGVKTPFANIVTSFFVTLVLCAATSLLKYVPTAVLGSIICEAVISLFEFHDIWRALWVAPVDFLVMIFTFFVTVLYNVEKGLEYGIIASVVILLLQISKLDMDSIGQLRMADDEVQMLVDPKAGTQLRPMDNYPSARQHPSIKVLRLRANLFFGNVSMFRDEFYASMVEVGANIKAVIIDASGVLEMDLSALAVIDELVSEMQKQKVEVFIASASSRVVKSLDAYDLLEDVGGLPLVTLEIVDVFWAVLEDL 664
            L +  I   GRKF S    L+S PY PW  F+W  Y  HAP+D++ GLTVG+MLVPQGMAYA LS+LPPIYGLYASTIAGYVY+ FGTSGQLT+GPVALVSLFMSET+T LGIPL  KD DP+LN  A YHT VR ++AAV+S   A++LC MA+FRVGSL+KF+SPSVL GFVTGS VYIF++QSK+IWG K+ RDTVQ++E +YL +HI T+SN  ++ +GLT+FF LW    LR++++  + R+R  K WLAN + + LS+ TL+VI+++T VS YLI++G  + +IG +P GFN F++PA+ N FYG GIPF K+M+ A+P+  LTYLESVSV RKYAL +KY+LDMTQELWALGFGCLFASFF+ YPPGGSFSRTAL+HEVGVKTP AN+VTS FVT+VL AATSLL++VP AVLG+IIC  ++SLF+FHD+WRALWVAPVDFLVMIFTF VTVLYNVE+GLEYGIIASVVILLLQ+SKLDMDSIGQLR+ADDEV+MLVDPKAGTQ RP+DNYPSARQHPSIKVLRLRANLFFGNVSMFRDEFYAS+VEVG+ IKAVIIDASGV+EMDLSALAVIDELV+EMQKQ+VEVFIASAS+RVVKSL+AYDLL+DVGGLPLV LE+ DVFWAVLEDL
Sbjct:   75 LQMPPIESMGRKFIS----LLSFPYLPWVSFEWRKYGKHAPADIMGGLTVGIMLVPQGMAYAALSNLPPIYGLYASTIAGYVYTFFGTSGQLTLGPVALVSLFMSETFTSLGIPLTEKDKDPILNAEAQYHTFVRGQMAAVVSFGAAVLLCGMALFRVGSLMKFVSPSVLTGFVTGSAVYIFISQSKYIWGFKIPRDTVQINEYRYLITHIRTESNSTAMAMGLTSFFALWFLNTLRRSSRPHISRIRTRKPWLANFLAILLSSTTLLVIIVATAVSYYLIQNGMELEIIGKVPAGFNKFEYPALNNDFYGEGIPFGKVMICALPIALLTYLESVSVARKYALYNKYALDMTQELWALGFGCLFASFFKAYPPGGSFSRTALQHEVGVKTPLANVVTSLFVTMVLVAATSLLEFVPKAVLGAIICTCIMSLFDFHDMWRALWVAPVDFLVMIFTFLVTVLYNVERGLEYGIIASVVILLLQLSKLDMDSIGQLRVADDEVEMLVDPKAGTQFRPLDNYPSARQHPSIKVLRLRANLFFGNVSMFRDEFYASLVEVGSAIKAVIIDASGVVEMDLSALAVIDELVNEMQKQQVEVFIASASTRVVKSLEAYDLLDDVGGLPLVQLEVEDVFWAVLEDL 707

The following BLAST results are available for this feature:

BLAST of NO24G02500.1 vs.

BLAST of NO24G02500.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24463.1	6.500e-264	72.68	sulfate transporter [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G02500	NO24G02500	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO24G02500.1	NO24G02500.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO24G02500.1.cds1	NO24G02500.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds2	NO24G02500.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds3	NO24G02500.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds4	NO24G02500.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds5	NO24G02500.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds6	NO24G02500.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds7	NO24G02500.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds8	NO24G02500.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds9	NO24G02500.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds10	NO24G02500.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds11	NO24G02500.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds12	NO24G02500.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds13	NO24G02500.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds14	NO24G02500.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds15	NO24G02500.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds16	NO24G02500.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds17	NO24G02500.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds18	NO24G02500.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02500.1.cds19	NO24G02500.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr24:685897..697475-
coding sequence from alignment at chr24:685897..697475-

mRNA sequence

>NO24G02500.1 ID=NO24G02500.1|Name=NO24G02500.1|organism=Nannochloropsis oceanica|type=mRNA|length=2428bp
ACAGTTCCCTGACTAGTTTGGCCCTCGCCCGCAGCACTTCAGTCGCCCCA
CTCATCTCCAGCCCACAAAATACTTCCCCCATTTCAGAGTGCATTTACTT
TTCTAAGAATACTGTACTCAGTCACCATGGTATGCCCCTCCTCGCCTCGC
CGCTCACTCTCAGCCAGCATCGAGCTTCCCGAGGCCTCCATCGTCAATAT
CCCGCCCTCCATCCCCACTGCCTTCTCCTCTTCCTTTCACGAGACTAAAC
ATTTCGAAAAGGGTGCGGAAAGCGTCGGCCCAGAAGGGCATGTCAAGCTT
TACCTGCGAGAATGCTGCCTGGGCTGCATTCCCCCCATATCCGTCGCAAG
GGCATAACCTTTCCCCCCTAAATGTGAGCACAATTAGTTGTGGCGGAAGG
AAATTTGCATCTGATTGTCTGGGCCTTGTATCACTCCCTTATTTTCCCTG
GGCCAGATTCAAGTGGTCAACGTATCCACTTCATGCTCCTTCCGACGTGC
TGGCGGGCTTGACCGTGGGCGTCATGCTAGTGCCACAAGGCATGGCATAT
GCTGTCCTGTCCTCACTCCCGCCAATCTACGGCCTCTACGCCTCCACCAT
AGCCGGCTACGTCTACTCACTCTTCGGCACTTCTGGACAGTTGACCATCG
GACCCGTGGCGCTGGTGTCCCTCTTCATGTCCGAGACTTACACAAAGCTA
GGCATCCCCTTAGCCATCAAGGACATGGACCCTATGCTAAACGTTCCAGC
CCACTACCACACCCATGTGCGATGTGAGATCGCGGCCGTTATTTCCCTCG
CCGTGGCCCTCATGCTTTGCGTCATGGCCATCTTCCGCGTGGGCTCACTC
ATCAAGTTTATAAGTCCCTCCGTCTTAGCTGGCTTCGTCACCGGCAGCGG
CGTGTACATCTTCGTCACACAGAGCAAGCACATCTGGGGCATCAAGCTGT
CTCGGGATACGGTGCAGGTTCACGAACTGAAGTACCTATTTTCGCACATT
GGCACAGACTCGAACAAATACTCAGTCACAATCGGACTGACCGCCTTCTT
CACCCTCTGGACCTTTACGGCCCTTCGCAAAGCTACCAAATCGAAAGTGC
GCAGGTTGCGAGAGAACAAGGCCTGGCTGGCCAATCTAATCACCGTCACG
CTCTCGGCAGCCACACTGGTCGTTATCGTCATCTCCACACTCGTCTCCCA
ATATCTGATCAAGAGCGGCAAGAGCATCACTGTGATTGGCGACATTCCGC
CTGGCTTCAACACATTCCAGTTCCCAGCCATCATCAACAGCTTCTACGGC
GTCGGCATCCCCTTCAGCAAGATCATGGTAGCCGCTATCCCAGTCACTTT
CCTGACCTATCTTGAATCCGTTTCTGTTGGCCGCAAGTACGCCCTTGTGC
ATAAGTACTCCCTAGACATGACCCAAGAATTGTGGGCCCTGGGCTTTGGC
TGTCTTTTCGCATCCTTCTTCCAGGGCTACCCTCCAGGTGGTTCCTTCTC
GCGTACGGCGCTTAAGCACGAGGTAGGGGTTAAGACCCCGTTTGCGAACA
TCGTCACGTCTTTCTTTGTCACGTTGGTATTGTGCGCCGCCACATCCCTC
CTGAAGTATGTACCTACGGCTGTGTTGGGCAGTATTATCTGCGAGGCGGT
CATATCCCTTTTTGAATTTCACGACATATGGAGGGCGCTGTGGGTGGCTC
CGGTGGACTTTCTGGTCATGATCTTCACATTCTTTGTCACTGTCCTCTAC
AACGTCGAGAAGGGTCTCGAGTACGGCATCATTGCCTCGGTCGTGATCCT
CCTCCTCCAAATCAGCAAGCTGGACATGGACTCCATCGGACAGCTCCGAA
TGGCCGACGACGAGGTGCAGATGCTCGTCGATCCCAAAGCAGGCACCCAG
CTGCGGCCCATGGACAATTACCCTTCCGCCCGGCAGCATCCGTCCATCAA
GGTGTTGCGCCTGCGAGCCAACCTCTTTTTCGGCAATGTGTCTATGTTCC
GCGACGAGTTCTACGCCTCCATGGTCGAAGTGGGCGCCAACATCAAGGCG
GTTATCATCGACGCTTCAGGTGTGTTGGAAATGGACTTGTCGGCCTTGGC
CGTCATCGATGAGCTTGTCAGTGAGATGCAGAAACAGAAGGTGGAGGTCT
TCATCGCCTCGGCTTCGTCCCGCGTGGTCAAGTCTCTGGACGCCTACGAC
CTACTGGAGGACGTTGGGGGGCTGCCCTTGGTCACCCTGGAGATAGTGGA
TGTGTTTTGGGCCGTTCTGGAAGACCTAGACATCGAGGAAGCCCAAAACG
CTCCGCAGCGCCCTCGCTCCAACTCGGCCTTGCAGGCACTGGCGGAGCAT
CGGGCCAACAGCACGGGGGTCAATGGCAGCAGCTCCCACCAGCCGAAGGG
GAGTCCAGGGAAGGGGGATGGAAAGTAG

protein sequence of NO24G02500.1

>NO24G02500.1-protein ID=NO24G02500.1-protein|Name=NO24G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=713bp
MSSFTCENAAWAAFPPYPSQGHNLSPLNVSTISCGGRKFASDCLGLVSLP
YFPWARFKWSTYPLHAPSDVLAGLTVGVMLVPQGMAYAVLSSLPPIYGLY
ASTIAGYVYSLFGTSGQLTIGPVALVSLFMSETYTKLGIPLAIKDMDPML
NVPAHYHTHVRCEIAAVISLAVALMLCVMAIFRVGSLIKFISPSVLAGFV
TGSGVYIFVTQSKHIWGIKLSRDTVQVHELKYLFSHIGTDSNKYSVTIGL
TAFFTLWTFTALRKATKSKVRRLRENKAWLANLITVTLSAATLVVIVIST
LVSQYLIKSGKSITVIGDIPPGFNTFQFPAIINSFYGVGIPFSKIMVAAI
PVTFLTYLESVSVGRKYALVHKYSLDMTQELWALGFGCLFASFFQGYPPG
GSFSRTALKHEVGVKTPFANIVTSFFVTLVLCAATSLLKYVPTAVLGSII
CEAVISLFEFHDIWRALWVAPVDFLVMIFTFFVTVLYNVEKGLEYGIIAS
VVILLLQISKLDMDSIGQLRMADDEVQMLVDPKAGTQLRPMDNYPSARQH
PSIKVLRLRANLFFGNVSMFRDEFYASMVEVGANIKAVIIDASGVLEMDL
SALAVIDELVSEMQKQKVEVFIASASSRVVKSLDAYDLLEDVGGLPLVTL
EIVDVFWAVLEDLDIEEAQNAPQRPRSNSALQALAEHRANSTGVNGSSSH
QPKGSPGKGDGK*

mRNA from alignment at chr24:685897..697475-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO24G02500.1 ID=NO24G02500.1|Name=NO24G02500.1|organism=Nannochloropsis oceanica|type=mRNA|length=11579bp|location=Sequence derived from alignment at chr24:685897..697475- (Nannochloropsis oceanica)
ACAGTTCCCTGACTAGTTTGGCCCTCGCCCGCAGCACTTCAGTCGCCCCA
CTCATCTCCAGCCCACAAAATACTTCCCCCATTTCAGAGTGCATTTACTT
TTCTAAGAATACTGTACTCAGTCACCATGGTATGCCCCTCCTCGCCTCGC
CGCTCACTCTCAGCCAGCATCGAGCTTCCCGAGGCCTCCATCGTCAATAT
CCCGCCCTCCATCCCCACTGCCTTCTCCTCTTCCTTTCACGAGACTAAAC
ATTTCGAAAAGGGTGCGGAAAGCGTCGGCCCAGAAGGGCATGTCAAGCTT
TACCTGCGAGAATGCTGCCTGGGCTGCATTCCCCCCATATCCGTCGCAAG
GGCATAACCTTTCCCCCCTAAATGTGAGCACAATTAGTTGTGGCGGAAGG
GTAAGAGAGCGGATGTGTGTCCTATAGATACCTGCGTTTGTGTATGTCCT
GTTTCCTGTGCAGCAGATCTTGTCCTGTCTTTCCACTTACTCTCGACTCG
CCTGCTCACCATTCCTTCTTCCCTCTCCTTCCTTCTTATACAGAAATTTG
CATCTGATTGTCTGGGCCTTGTATCACTCCCTTATTTTCCCTGGGCCAGA
TTCAAGTGGTCAACGTATCCACTTCATGCTCCTTCCGACGTGCTGGCGGG
CTTGACCGTGGGCGTCATGCTAGTGCCACAAGGTGAAGAAGAAAATACGA
GGGAGGGCAGACAGAGTGGAGAAGCTTGTGTCCTGCTCTTTTATTATTGA
GTACTCAACTCTCCGATATTTTCATTTTTTTCCATCTTCCTTTTTCATAG
GCATGGCATATGCTGTCCTGTCCTCACTCCCGCCAATCTACGGCCTCTAC
GCCTCCACCATAGCCGGGTACGTTCTTCGACATGTGAAAGCATCACTTTC
CCTCTGCCCCCTTGCTCATTCGCTCATCCTCTCTTGCTAATTTAATTCTC
ATTTAAATTATACACACTCTTTTGTGCTTGCTAACTTCCTTATCCTCATC
TCCTCTCTACCTCTCATCCGCATTTCCCAGCTACGTCTACTCACTCTTCG
GCACTTCTGGACAGTTGACCATCGGACCCGTGGCGCTGGTGTCCCTCTTC
ATGTCCGAGACTTACACAAAGCTAGGCATCCCCTTAGCCATCAAGGACAT
GGTAAGAGGAAAAGGGCGAGAGGGGAGGATAGATGGAGGTAGGGAGAGAG
GGGGGAAATGAAGTGATATGTATTGAGCAAGCGCTCAGACGAATGTCTTA
TATCGTCCCTCTTCGCCCTATTTTTTCCTCTCCGACTGGCAGGACCCTAT
GCTAAACGTTCCAGCCCACTACCACACCCATGTGCGATGTGAGATCGCGG
CCGTTATTTCCCTCGCCGTGGCCCTCATGCTTTGCGTCATGGCCATCTTC
CGCGTGGGCTCACTCATCAAGTTTATAAGTCCCTCCGTCTTAGCTGGCTT
CGTCACCGGCAGGTACACCTTGCACTCTCCCTCGCCCTTTCCATCCCTTT
TCATTCGTTTATATCATTTCCCTCTTCCTATCGACGATTCTACGACTGTT
GTAACACTCCTTCCCTCCATTTCTTCCTCCCTCGTTCCCTCCAAGCGGCG
TGTACATCTTCGTCACACAGAGCAAGCACATCTGGGGCATCAAGCTGTCT
CGGGATACGGTGCAGGTTCACGAACTGAAGGTGCGGGTGGGAAAGAAAAA
AGATGAGACGACGCTAGTTTTATTTTTCACGTGTCATCCTCCCTCCCATT
CTCCTCCTCCTTTTTATGTAGTACCTATTTTCGCACATTGGCACAGACTC
GAACAAATACTCAGTCACAATCGGACTGACCGCCTTCTTCACCCTCTGGA
CCTTTACGGCCCTTCGCAAAGTAATGTCCAAATGCTGCCCTGGGACAAGG
CCTGCCCAACGGAAGGGGGGGAAGGAGGAGGAGGAGGAGTGAATGATTGC
GTTCACGTGCCTTTCCACGTGCTGAGTGCTGAATCCCTATTTCTGTTTCT
ATTTTTCTCTTCCGTCATCCTTCAGGCTACCAAATCGAAAGTGCGCAGGT
TGCGAGAGAACAAGGCCTGGCTGGCCAATCTAATCACCGTCACGCTCTCG
GCAGCCACACTGGTCGTTATCGTCATCTCCACACTCGTCTCCCAATATCT
GATCAAGAGCGGTGAGGGAAGGCAAATTCTTTTTTCCTCGCTCGCCTCAT
TCCTTTTCCCACCCCCTGGATTATTGTTATGAAGCTCAAACCATCTATTC
ATCTCCCTCCCTCCCTCCCTCACTCTGTTCTCCACTTCCAAGGCAAGAGC
ATCACTGTGATTGGCGACATTCCGCCTGGCTTCAACACATTCCAGTTCCC
AGCCATCATCAACAGCTTCTACGGCGTCGGCATCCCCTTCAGCAAGATCA
TGGTAGCCGCTATCCCAGGTAAAGCCGGCCATCCTTTCCCCTCTTCTTTA
CTTCTCTCGCTTACACTAGCATGAGTCCATCAGATTGCCTTTCCTTCACC
TCTTCTCATTTTTTTACGTACAGTCACTTTCCTGACCTATCTTGAATCCG
TTTCTGTTGGCCGCAAGTACGCCCTTGGTAAGTGTGCATGCATGTATATG
CTATCTCTCCCAGTAGGTTCCCGCCATTCCTCACTGCCTCTCATTTACTC
TCATCATCCCTCTTCTTCCTCCAAAGTGCATAAGTACTCCCTAGACATGA
CCCAAGAATTGTGGGCCCTGGGCTTTGGCTGTCTTTTCGCATCCTTCTTC
CAGGGCTACCCTCCAGGTGGTTCCTTCTCGCGTACGGCGCTTAAGCACGA
GGTAGGGGTTAAGACCCCGTTTGCGAACATCGTCACGTCTTTCTTTGTCA
CGGTAAGAAGGAAAGGAAAGGATCGGGAGAGAGAAGGGAGGACGTACTTA
CTTTTTGTTGTCGGTAAGAATCTTCCGCCAAAGCCGACGCGGGCATGATG
AGTGATGGGATCGCGTTTTGTGTTTCTCAGTTTCATCTCTTTATCTCACC
CGTATGCCCATCCGTTCTACCCTTCCTCTCCAAAATATCCCTTAGTTGGT
ATTGTGCGCCGCCACATCCCTCCTGAAGTATGTACCTACGGCTGTGTTGG
GCAGTATTATCTGCGAGGCGGTCATATCCCTTTTTGAATTTCACGACATA
TGGAGGTACGTTAAAAAGTGAGAGAGAAAGGGACGGAGAGCGGGCGGCGA
GGCAGGGTGTTTCTTAGACGTAGTGTGTATTTTGGGAAAGGTCGGAGACT
CGTCACTCTACTTCGCTGTGTTTGCATCGCGCCGCACTTCTAGAACTTAA
TATGAGTTATTGCATGTACAGTCTGAATACTTTTCTCTTGTTGCTATCAT
ATCATGCGCATCGTATCTTTTTCTTATCTCCATTCTCCTCCCACTCTCCC
TATTTCTACTCTTTTTCAGGGCGCTGTGGGTGGCTCCGGTGGACTTTTTG
ATCATGATCTTCACTTTCCTTGTCACTGTCCTCTACAACGTCGAGGCCGG
CTTGGAGTACGGAATTATCGCCTCTGTCGTCACCCTTCTTCTCCAAATTT
CTCGATTAGGTATCTTTTAATACATTATATGTCCTGCTCCTCTTCCTTTC
TCTCTCTTCGTTAATATTCACATGCAAAAGTTGAAAACCATCACCACTCT
CCGTTTTCCCCTCTCTCCTTATCCCATTAGACATTAATTCCATCGGACAG
CTCATGATTCCAGAAGACACTGTCGACAGGAAGCTGGGCACACACTTTCG
GCCTCTGGATAAGTGTCCCTCCGCAAGGCAGCATCCTGCAGTTAAGGTCT
TGCGCCTGCGGGCAAACCTCTTCTTCGGGTAAGGAAATAATAGGGGAGGG
CGGGGTAGTATAAAAAGATATTATAATCCGCCTCTCTTCTTCTCCTTCCC
ACTTAAGCAACATATCTATCTTTCGTGATGAGTTTTACGCGTCCATTATC
CAGAGCGGGGACCCCATTAAGGTATGCACTCTCCTCCCTTGTCTCCTTCA
TGCATCGTTTCATCTTTCTTTCTTCCACGCTGACAGCTAATCACCACTTA
CCTATTCAATCCATCCTTCCTTTTTGAAAGGCAGTGATCATCGATGTCTC
AGGCGTAGGTGACATGGACCTATCGGCCCTAAGTGTAGTTGACGAGATGG
TGGCCGAGATGCACAAGCAGCAAGTCAAGGTTTTCATCGCCGCCGCCGGG
TAAACGAGAAAGAGAATAAAAGAATTAGAGTAAAAGAAAACATTAAAACG
AATGCTGTTCAAGAGATTTCTATGACGGAGGCATAACCCTCACTCTTACC
CTCCCTTCCCTCCCTCAAATCCCAGTGCCCGCGTGCTTAAGTCTTTGGAG
GCCTACGATTTGCTGAACGATGTAGGTGGGTTGCCTCTGGTGCGGCTGGA
TATTGCAGATGTGTTTTGGGCTGTTTTAGAAAGTCTAAATATTGAGGAAG
CAGGTAAGGACGAAGAAAGGGAAGAGGTGGGCCGGAAAGGAGGGTAGAAT
AAAGAGAAATGGCTGTGATTTTTTTTCCACCCATGCTCAACAGTTACTAT
TTTCTTGATTTTCATTTTTATTTCTCCCCCTCCCCAAAAGGTGGAGATTT
AACTTCCACTTCCGAGACAATTCGGGGAATAGGCTACAGCAGCACGTCCA
TGGCACATGCCGAGCAGGTGGTAAATTGAAAGTATCGGAGCGAGAAATGA
ACAGGAAAGTTGGCCACATGAAAGAATGGGATAAGGATTAGAAGCTAATA
TTGGCGCAAATCCTGAAAGTAATAAATATCTCATTCTTCATTTCCCATCG
TCCAGGTGCTAGCGGAACGATGGGCAATGCCACAGGGCTAAAAAAAATTA
CCAAGTGCAAGTAAAGGAGGAGGAGGAGACTTTGAGAAGGATGAGGCCCA
AGAAGGCGAAGGGCACAAAGACCTCGCGGTCTAGTGGTCTAGTGCTGGAA
ATGAATGGAGAGGAGTGGGACAGATGTGTCACTGAGTGAATTAACGGATG
TTGTGTACATGGTGCGGATGTATTCATAATAGGAGAGAAAGGAAGAAGTG
GTATGAACGCGGAATCGTACGTCATCGTGTTGCCCCAGTGACTGTGGGGG
AAGACTTCATTCGGTTTGCTTGGTCAAAAGCAGCTCCTTCCATAGGAGTT
TTTTAACGATATCACTTCATCAGCTCTGTGGTCACGGTGTGTGGGCGATT
GGTTCATCGGCGCACGCTGCAACGCAGTGCGATGGCAAAAGAATTATGTG
CCCCAGGTGTATGGAAGCAAAATGGTGTGTGCACCTTCCGTCTGCAAATT
AAATAACCAAGATCGTCACCTCAGCCCCGCATCTCGCAAAACATTCTCTA
GGGTATCTCGCCATTGTTGCCTTGGATTGGTGACCCCAACGTGGCGCACA
CAGTCCTTGAGACCTTCGACCATCCTCCGCCGCTCCCACTGCCATAATCA
TCGATCATCCTCTTCAGCGAGGAGCCGGCCTCATGCATCTACCGATCACA
TATACACCAAAACCTACAGGGCCAATGGCCTCCCTAGGCAACGGCGCAGC
TGTGGAGGATGATACTGAGATGGGAGCCGCTGTCGTAGTCGATGTCGGGG
CTTTGGACGGCGGGAGCAGAATGTGTAGTGACAGCCAGGAAGCGTCCGGG
CGCTCGGGGTGGGTGGTCAGGGGTGGGAAGGGGGGACCAAGGGAGAGATG
GAGGACACCTATCCATCAAGACACTCCCTTTTGTTGTTTGTAGGCATACT
TCCAGTTCAGGAGATGACTCTCCCCTCCCTCCCTCTCCTTCATTTTAACA
GGCGTTCTACCAAGGCATCCTCTCCCTCCCAAGCCCCTTCCACGGATAAG
GCCCACGCTACCACCATGGGGGAGCACTTGCGAACCCAATTTCATGACTA
TTTTCTAGGTACGCGCACATCTGTGAATGTGATTTAGTGGCCTTTGTATG
GAGCTGGCGATTGAGTCAGCGTCAAGCTGAAGGAGAGTGGGTGGGAGGTG
GGAGTAGATGCATATCCAGACACGGCTACGCTCGCCGCTCTCGAGCAACC
GCCCCCCCTTTTCTAATAAGCATTCTAACGTGCACATTTTTGAACTGAAC
TCCCTTCCCTTCCGCTCCGTCCATCCCCCGCCAACCCCTTTCTCAAGGCT
TCGTGCCGCCGCACATCCGACGCAAAGGCCTGCAGATGCCACCCATCGAG
TCCATGAGCAGGAAGTTCCTCTCCCTCCTCTCCTTTCCCTACCTGCCCTG
GGCCTCCTTCGAATGGCGCAAGTACGCCAAGTACGCACCCGGAGACATGA
TTGTGCGTATCGGGGGAGGGCGGGGTGGAGGGAGGGGAAGGAGGGAGGGA
GGGAAGGAGGGAACGATAGCTGCTGGGACATGTCTCTGCATGTTCCACGG
CGCTCTGTGAGTGATGAGTCACCCTTACCGCCGTCGCTTATTACCTCCTT
TTCTGTCTCTCCTTTTCTGCCTGTCTTTCTCACAAATAGGGTGGCGTGAC
GGTGGGCATCATGCTGGTCCCACAAGGTGCAAGGACGAGGGAGGGGATAG
GGGGGAGGGGAGGAAGGGAAAAGGAGGGAGGGGCGGCGAACAAGCCACGT
GCATCACATACATGCACCCGTACAGAGCGCTATGAAGACACAAACTCATT
ACTCCCTTTGCCCCCCCTCTGACCTCTCAGGCATGGCCTACGCGGCGCTG
TCCAACCTGCCGGCAATTTACGGGCTTTACGCCTCCACCATCGCGGGGTG
CGTCGGGAGGAGGGAGGGAGGGTGGGAGGAAGGGAGGAAAGGAGAGATAA
GAGGGGGGCGAAAGAAGGAATAAGAAGGAGGCATGTACCATTGGATGAAA
GGAGAGGTGCCGTAATGCGGCGAATGTGGTCGCTTCATTCTCGTACCGGG
CACTCCCTTCCTCCGCTCACTCTTCCTCCCTCCCCCCTCCTTCTATCCCT
CCGTCCCTCTCTCCCCCTCCCCCCTCAGTTACGTCTATACCCTCTTTGGC
ACGTCAGGACAACTGACCCTGGGGCCCGTGGCGCTGGTGTCCCTCTTCAT
GTCCGAGGCCTTTACCACCCTGGGCATCCCCTGGTGGACAAGGACGCGGT
AGGGAAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGCAAAGAAA
GACGACGCTCTAGGACTTGGCAACACTATCCAAGCATGAAGCACACCCTC
CCACTCTCTCTCTCTCTCTCCCTCCCCCCCACCTCCCTCTCCTCGCAGGA
TCCCGTCCTGGACGCCCACGCTAAGTACCACACCCACGTCCGGGGGCAAA
TGGCGGCCGTCGTCTCCTTCGCCACTGCCGTGCTGCTCTGTGGCATGGCC
TTGTTCCGCGTCGGCTCGCTCATGAAGTTTGTTAGTCCCTCCGTCCTGAC
GGGCTTCGTCACGGGCAGGTACACGGCAGCCCTCCCTCCCTCCCTTTTTC
CCCTCTTCCCTCTCTTATTCCTCCCCGTTCTCGAATCTCTCTCTCTTATT
CTCTCTCTTATTCTCTCTTTCCCTCCCTCCCTTGACGCACAGTGCCATGT
ACATTTTCATTTCCCAGAGCAAGTACATCTGGGGATTCCAGGTAAGGAAG
GGGAAGAAGGGAGGGAGGGAAGGAAGGAGCAGGAGGGAGGAGTAACGGAT
ATCTGTGCGTTTGTTAGTGTTCCGTGTGGGAGCGACATCCGAGCGGTCTC
TGTGCTGGCGCTTTCCTCCTTGGTGTGCGGGCTCTCTGCTGCCTCCTCTT
CATTTCCCAAGCTCCTTCGAACGAGGCGAGAGACGCCGGCTCCCTCACCT
ACGCCTCACCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTACCCCAGGTGC
CCCGGGACACGGTGCAGATCAACGAGTATCGGTACCTCTTCCAGCACATC
GGGAGCAAGAGCAACCCCCTGGCCATGGCCATCGGCTTCACGGCCTTCTT
CGCCCTGTGGTTCTTCAACACCCTCCGGAGGGTGAGCATGCAGGGAGTGG
GGGGACGGGAGGGGAGGAGAGAGAAAGGAAGAAGCTCCGTAAAGTGGGCG
AAACTCCTTCACCTTCCTCAGGTGATCCTTTCCTCCCAGCCCCAGTCCAA
GCTCCAGCATCGGTCGACTTGGACAGGCGAGCCTGCCTCTTGAGCCACCT
CCGCTGATCCTTTTCCTTCATTCCCTCCTTCCCCCCTCCCTCCCTTCCTC
CAGATCTCCCGCCCCCGCCTCGCCGTCATTCGCGCCACCTATCCCTGGCT
GGCCAATTTCTTGGCCATGATCTTGTCCTCCACCACCTTCCTTGTCATCA
TCGTCGCCACGGCCGTCTCCCACTCCCTCGTCAGGGCCGGCAGGCAACTA
GGTGAGGAAGGAAGGAATGAAGGAAAAGAGAGAGAGAGGAAGGGAGGGCT
AGCTCTGTGTCTAATGAATGCTCACAAAATCTCCTTTACGGTCTCCCTCC
CTCCCTCCCTCTCTTCTCATCTCCTTCCGCCCGCCCTCCCTCCCTCCCTC
CCTCCCTCCCCCCTAGACATCATCGGCACGGTCCCCGCGGGCTTCAACAC
CTTCGAATACCCAGCCCTGCACAACGACTTTTACGGCGAGGTACGTCCCT
GCCTGCCTGCCTCCCTCCCTCTTTGCTTTCTCTCTTCCCTCCTTTCTCTT
CTTCCCTCCATCCCTTATTCCCTTGCTACACAAATCTGCCTACCTCCTTA
TTTCTGTCATCCTGCCCTCGTTCATTCGGCCTGCTCTTTGCGGGCATATA
CCCCCATACATTCACACCGACAATCAAAAGCTTCGCGTTTATCAGCCCTT
CCTCCGCTCCTCCCCCCTATTCCTCTTGTAGGGCGTCCCGTTTTCCAAGG
TGATAGTGAGCGCCATCCCCATCGCCCTCTTGACCTACCTCGAGTCCGTC
TCGGTGGGTCGAAAGTACGCCTTGATCAACAAATATGCCCTTGGTACGCA
TCTTGTCTTTCCCTACCCTCCCTCCCTCCCTCCCTCCTCCTTCTCTTGTC
CGTCCTCTCCCCTGCTTCCCATCTCCCTCCCGAACGCCTCCTTGACTTGA
CTTACGTAGAATGGAGTCGATCGTGGCAACGTGCAATGCACGGCCCTTGA
TCGATCAGTTGTACGCGTGCCCTCTGGAGGCTGTGGGACGGAGGAGGGAG
GGCGGGAAGAAGGAAGGGAAGGATAGACTCATTGGCATGCACGGATTAGT
TGGCTCATATACTCGCTTCGCCTCCCTCCCCCCTCCCTTCTCTCCTCCAG
ACATGACTCAAGAATTGTGGGCGTTGGGTCTTGGCTGCCTATTCGCCTCC
TTCTTTCAGGCCTACCCCCCGGCGGGTCCTTCTCGCGGACGGCGCTGCAG
CACGAGCTGGGGGTTAAGACGCCTCTGGCCAACGTCGTCACCTCCCTCTT
TGTCACGGTGCGTGGGTGGGGGTGGGGGGGCTGTTCGTGGGTAGCTTTCT
TTCCTCTCTGTTTCCTCCCCTTCTTCCTCCCTTCGGAAGTAGCGGCGTTC
GTTCCTTGTCGAGAGAGGGAGGGAAGGAGGAAGGGTGGAGGAAATGAGTG
GGAGAGTGAGAGTGTACCTTCTTTGGACGATTCAATGCGCCCATCTTCCG
CCCTTTCCTTCCCTCCCCCCCCCTTTTTTAATTAGATCGTACTGGTGGCG
GCGACGACGCTGCTGGAGTTTGTGCCCAAGGCCGTTCTGGGCGCCATCAT
CTGCACCTGCATCATGAGTTTGTTCGACTTCCACGACATGTGGAGGTGAG
GAGAGAAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGAAGGGGGAG
AGGTCGAAGGCATACTTTGTTTTGATTGTCATCCCGGCCCATTCCATGAC
CGTCCTCTCCCTCCTTGCTTCCTTCCTGCCTTCTCTCCCTCCCTCCCGCC
ACCATAGGGCGCTGTGGGTGGCTCCGGTGGACTTTCTGGTCATGATCTTC
ACATTCTTTGTCACTGTCCTCTACAACGTCGAGAAGGTATGTTCCGCCCG
CCCTCCTTCTCCCCCTCCCTTCCCTTGCCAGTCCCTATGTCCGTTTCATA
CCTGCTCTTCCCTCTTGCCGTCCCTCCCTCCCTCTCTCTTCCCAACCCTC
CTCTGCCCCTTCCTCAGGGTCTCGAGTACGGCATCATTGCCTCGGTCGTG
ATCCTCCTCCTCCAAATCAGCAAGCTGGACATGGACTCCATCGGACAGCT
CCGAATGGCCGACGACGAGGTGCAGATGCTCGTCGATCCCAAAGCAGGTA
CGGCCAGGCCTTCGTCTCTCCCTCCCTCCCTCACTCCCACTCTCCCTTCA
TTTTTCCTCTTTCGGTGCAGACAGCTGCAGTCTGTTTTCATACCATGAAC
ACAAACACGAAAATATAACACTCACATTTTCCCCTGTCCAAACATCCCGT
CCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCTCCCTGCCGTCTATAGGC
ACCCAGCTGCGGCCCATGGACAATTACCCTTCCGCCCGGCAGCATCCGTC
CATCAAGGTGTTGCGCCTGCGAGCCAACCTCTTTTTCGGGTACACATAAA
AGAGAGGGAAAAGTGGATGGAAGGAGGGAGGGAAGCAAGTCGTGAATTCG
CGTCTCGGATGTTTTTGCCCTCAAACCTTCCATCCCCCCTCCCTTTCTGC
CTCCCTCGTCCCCCAGCAATGTGTCTATGTTCCGCGACGAGTTCTACGCC
TCCATGGTCGAAGTGGGCGCCAACATCAAGGTACGTGCGTACGCTCTTGG
CCTTCCTGCCTCTCTATCTCCCGCTCTCCTTTCTCGAGCCACGCTCACCT
GCCTTCCTCCCTCTTCTCTCTCGTTTTCTGCCAGGCGGTTATCATCGACG
CTTCAGGTGTGTTGGAAATGGACTTGTCGGCCTTGGCCGTCATCGATGAG
CTTGTCAGTGAGATGCAGAAACAGAAGGTGAGGAAGCTGGAGGAGAGGAG
AGAGAGGAAGGGAGGAGGGACGATGGGAGGGACGAACTCATCGCCAAAGT
GTAAAGGCAGCCGGCATGGAGGCACAGAGGGTGGCGGACGTAGGCCACAA
GAAGGCGACGAGAAAGTGGATGGGTCTCTGGGTCGTAGCAGCATCCCATG
TTTTTTAGCCGACAAGTTCTCACCTCCCCCCCCTTTCCCCCTCAGGTGGA
GGTCTTCATCGCCTCGGCTTCGTCCCGCGTGGTCAAGTCTCTGGACGCCT
ACGACCTACTGGAGGACGTTGGGGGGCTGCCCTTGGTCACCCTGGAGATA
GTGGATGTGTTTTGGGCCGTTCTGGAAGACCTAGGTAGGTGCTGCTAAGC
ATACTTCCGCTGTCTCGTGTTCGGGATCCTTCCCCGGTCTCTGTGTTTCC
AAGGCGCGGGGACTCATGTAAGATTGGTTAAGCCCTAGTCTCACAACCTC
TTATCTCCCTCCCCTCTCTTTCCCCCAAAGACATCGAGGAAGCCCAAAAC
GCTCCGCAGCGCCCTCGCTCCAACTCGGCCTTGCAGGCACTGGCGGAGCA
TCGGGCCAACAGCACGGGGGTCAATGGCAGCAGCTCCCACCAGCCGAAGG
GGAGTCCAGGGAAGGGGGATGGAAAGTAG

Coding sequence (CDS) from alignment at chr24:685897..697475-

>NO24G02500.1 ID=NO24G02500.1|Name=NO24G02500.1|organism=Nannochloropsis oceanica|type=CDS|length=2139bp|location=Sequence derived from alignment at chr24:685897..697475- (Nannochloropsis oceanica)
ATGTCAAGCTTTACCTGCGAGAATGCTGCCTGGGCTGCATTCCCCCCATA
TCCGTCGCAAGGGCATAACCTTTCCCCCCTAAATGTGAGCACAATTAGTT
GTGGCGGAAGGAAATTTGCATCTGATTGTCTGGGCCTTGTATCACTCCCT
TATTTTCCCTGGGCCAGATTCAAGTGGTCAACGTATCCACTTCATGCTCC
TTCCGACGTGCTGGCGGGCTTGACCGTGGGCGTCATGCTAGTGCCACAAG
GCATGGCATATGCTGTCCTGTCCTCACTCCCGCCAATCTACGGCCTCTAC
GCCTCCACCATAGCCGGCTACGTCTACTCACTCTTCGGCACTTCTGGACA
GTTGACCATCGGACCCGTGGCGCTGGTGTCCCTCTTCATGTCCGAGACTT
ACACAAAGCTAGGCATCCCCTTAGCCATCAAGGACATGGACCCTATGCTA
AACGTTCCAGCCCACTACCACACCCATGTGCGATGTGAGATCGCGGCCGT
TATTTCCCTCGCCGTGGCCCTCATGCTTTGCGTCATGGCCATCTTCCGCG
TGGGCTCACTCATCAAGTTTATAAGTCCCTCCGTCTTAGCTGGCTTCGTC
ACCGGCAGCGGCGTGTACATCTTCGTCACACAGAGCAAGCACATCTGGGG
CATCAAGCTGTCTCGGGATACGGTGCAGGTTCACGAACTGAAGTACCTAT
TTTCGCACATTGGCACAGACTCGAACAAATACTCAGTCACAATCGGACTG
ACCGCCTTCTTCACCCTCTGGACCTTTACGGCCCTTCGCAAAGCTACCAA
ATCGAAAGTGCGCAGGTTGCGAGAGAACAAGGCCTGGCTGGCCAATCTAA
TCACCGTCACGCTCTCGGCAGCCACACTGGTCGTTATCGTCATCTCCACA
CTCGTCTCCCAATATCTGATCAAGAGCGGCAAGAGCATCACTGTGATTGG
CGACATTCCGCCTGGCTTCAACACATTCCAGTTCCCAGCCATCATCAACA
GCTTCTACGGCGTCGGCATCCCCTTCAGCAAGATCATGGTAGCCGCTATC
CCAGTCACTTTCCTGACCTATCTTGAATCCGTTTCTGTTGGCCGCAAGTA
CGCCCTTGTGCATAAGTACTCCCTAGACATGACCCAAGAATTGTGGGCCC
TGGGCTTTGGCTGTCTTTTCGCATCCTTCTTCCAGGGCTACCCTCCAGGT
GGTTCCTTCTCGCGTACGGCGCTTAAGCACGAGGTAGGGGTTAAGACCCC
GTTTGCGAACATCGTCACGTCTTTCTTTGTCACGTTGGTATTGTGCGCCG
CCACATCCCTCCTGAAGTATGTACCTACGGCTGTGTTGGGCAGTATTATC
TGCGAGGCGGTCATATCCCTTTTTGAATTTCACGACATATGGAGGGCGCT
GTGGGTGGCTCCGGTGGACTTTCTGGTCATGATCTTCACATTCTTTGTCA
CTGTCCTCTACAACGTCGAGAAGGGTCTCGAGTACGGCATCATTGCCTCG
GTCGTGATCCTCCTCCTCCAAATCAGCAAGCTGGACATGGACTCCATCGG
ACAGCTCCGAATGGCCGACGACGAGGTGCAGATGCTCGTCGATCCCAAAG
CAGGCACCCAGCTGCGGCCCATGGACAATTACCCTTCCGCCCGGCAGCAT
CCGTCCATCAAGGTGTTGCGCCTGCGAGCCAACCTCTTTTTCGGCAATGT
GTCTATGTTCCGCGACGAGTTCTACGCCTCCATGGTCGAAGTGGGCGCCA
ACATCAAGGCGGTTATCATCGACGCTTCAGGTGTGTTGGAAATGGACTTG
TCGGCCTTGGCCGTCATCGATGAGCTTGTCAGTGAGATGCAGAAACAGAA
GGTGGAGGTCTTCATCGCCTCGGCTTCGTCCCGCGTGGTCAAGTCTCTGG
ACGCCTACGACCTACTGGAGGACGTTGGGGGGCTGCCCTTGGTCACCCTG
GAGATAGTGGATGTGTTTTGGGCCGTTCTGGAAGACCTAGACATCGAGGA
AGCCCAAAACGCTCCGCAGCGCCCTCGCTCCAACTCGGCCTTGCAGGCAC
TGGCGGAGCATCGGGCCAACAGCACGGGGGTCAATGGCAGCAGCTCCCAC
CAGCCGAAGGGGAGTCCAGGGAAGGGGGATGGAAAGTAG

Synonyms

Publications