NO24G02460.1, NO24G02460.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G02460.1
Unique NameNO24G02460.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length741
Alignment locationchr24:674962..676412 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:674962..676412 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G02460.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G02460NO24G02460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G02460.1NO24G02460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G02460.1.cds1NO24G02460.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G02460.1.cds2NO24G02460.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G02460.1.cds3NO24G02460.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G02460.1.cds4NO24G02460.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G02460.1.cds5NO24G02460.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G02460.1 ID=NO24G02460.1|Name=NO24G02460.1|organism=Nannochloropsis oceanica|type=mRNA|length=741bp
ATGGCCAAGAAGCGGAAACTGCGCCTCGAACAGTACTTCACCGCGCGTTC
TGGCTCGTTATTTATCAATCTGGAGGATGAATTAAGACGGCAGCTGCAGC
TCTATCAGCAGAACCCGCAGCAGCAGCAGCAGGCAGACGACTCTGGGGTT
GATGGCAGCCTCCCTGCCACACCGCAGGATCTTCTTCCCACCCCCCGCAG
CGCTTTCAAGGAGGAAGGCGAGATGGAGGGTAGGAGGGAGGAAGAGGAGG
TTGAAGAGCTAATACTGGATGTACGGGACGAGGCAAAATTGCTGATGGAA
ACTGTAGCGCATGATCTAGTCATGAAACCCGAGCTGTGGCTAGACGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGCCAGCAGTCGGGGAGAGGAAGACGG
TGGAGGAGGAGGGGAAGGCAGAAGGGAGGGAGGGATGGAGGGAGGACGGC
TTCGTGGATATCTGCATCTCGAGCACGGATACACCGCACTCCCCCACGGC
CACGTGGGGGGAGGGAGGGAAGGAGGGAGACATGAGGAGGGAAGCGGTGG
GCGGCAAGCCAGTGGAGGGGGACGGCAATAGTGATAAGAGGGGAAAAAGC
CTCGTCTCCTTCTTCCCGAGCGCTTTCCTTGCCCTGTTCAAGCGCCGCGC
CTCGCCCCCCACCGAGCCCTCCACCCCCTCCCCACCCTCTCCATTGGGGA
GAGGCACCACGGCGGGAACAAGGCAATGGCCAGGGAATTGA
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protein sequence of NO24G02460.1

>NO24G02460.1-protein ID=NO24G02460.1-protein|Name=NO24G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MAKKRKLRLEQYFTARSGSLFINLEDELRRQLQLYQQNPQQQQQADDSGV
DGSLPATPQDLLPTPRSAFKEEGEMEGRREEEEVEELILDVRDEAKLLME
TVAHDLVMKPELWLDEEEEEEEEEEPAVGERKTVEEEGKAEGREGWREDG
FVDICISSTDTPHSPTATWGEGGKEGDMRREAVGGKPVEGDGNSDKRGKS
LVSFFPSAFLALFKRRASPPTEPSTPSPPSPLGRGTTAGTRQWPGN*
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mRNA from alignment at chr24:674962..676412+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G02460.1 ID=NO24G02460.1|Name=NO24G02460.1|organism=Nannochloropsis oceanica|type=mRNA|length=1451bp|location=Sequence derived from alignment at chr24:674962..676412+ (Nannochloropsis oceanica)
ATGGCCAAGAAGCGGAAACTGCGCCTCGAACAGTGAGTGCCTTGTGCCCG
CCCTCCTTCCCACCCTCCGCCCCTACCTCAACTTTTGGGCTTTTTGCTTC
TTGAAGGACGAAGCATTAAGTGCTCCCTCCCTTTCTCCCTCCCTCCTTCC
CTCCCTCCGTTCCTCAGGTACTTCACCGCGCGTTCTGGCTCGTTATTTAT
CAATCTGGAGGATGAATTAAGACGGCAGCTGCAGCTCTATCAGCAGAACC
CGCAGCAGCAGCAGCAGGCAGACGACTCTGGGGTTGATGGCAGCCTCCCT
GCCACAGTGCGTAGGCTTCCTTGCCCTCCCTCTTTCCTTCTTTCTTTCTA
TCCATTGAATTGCTCTCATCCTTCCCTCATCTGGTCTGTCCCTTTCTCGC
TCCCTCCCTCCCTTCTCCTCCAGCCGCAGGATCTTCTTCCCACCCCCCGC
AGCGCTTTCAAGGAGGAAGGCGAGATGGAGGGTAGGAGGGAGGAAGAGGA
GGTTGAAGAGCTAATACTGGATGTACGGGACGAGGCAAAATTGCTGATGG
AAACTGTAGCGCATGATCTAGGTAGGGAGGGAGGGACCGAGGGTGGGAGG
GTTAAACGAGGAGATGATGGTGAGGTCTGCGTTGGAGGGAGGGACGGAGG
GAGGGACGGAGGAAGGGACGGAGGGAGGGTAGATTCAAGTGAGAAGATTC
GTTCTGTGTTTTGAGGGTCCATACACTCACTTCTCTTTCTTCCACCCCCT
CCTGCTCCCTCTCTCCCTCCCTCAGTCATGAAACCCGAGCTGTGGCTAGA
CGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCCAGCAGTCGGGGAGAGGA
AGACGGTGGAGGAGGAGGGGAAGGCAGAAGGGAGGGAGGGATGGAGGGAG
GACGGCTTCGTGGATATCTGCATCTCGAGCACGGATACACCGCACTCCCC
CACGGCCACGTGGGGGGAGGGAGGGAAGGAGGGAGACATGAGGAGGGAAG
CGGTGGGCGGCAAGCCAGTGGAGGGGGACGGCAATAGTGATAAGAGGGGA
AAAAGGTACGAAAGAAATTGTAGGAGGGAAGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAATAAAGATTTCTTTTTGCTGCCTTTTAATGCACGT
ACATCGTGTTTCACTTTCTTCTTCCCCCCTCCTCCCTCCCTCTCTACGTT
TCCCTTTCTCCCCTCCTTCAGGAGGCGCCCCCCCCCCCAGCCCTCCATAT
CAAACTCACCCACTTCCTCCCTCCCTCCTGTTCCCCCCTCCCTCGGCTCC
GCCCGTCAGCCTCGTCTCCTTCTTCCCGAGCGCTTTCCTTGCCCTGTTCA
AGCGCCGCGCCTCGCCCCCCACCGAGCCCTCCACCCCCTCCCCACCCTCT
CCATTGGGGAGAGGCACCACGGCGGGAACAAGGCAATGGCCAGGGAATTG
A
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Coding sequence (CDS) from alignment at chr24:674962..676412+

>NO24G02460.1 ID=NO24G02460.1|Name=NO24G02460.1|organism=Nannochloropsis oceanica|type=CDS|length=741bp|location=Sequence derived from alignment at chr24:674962..676412+ (Nannochloropsis oceanica)
ATGGCCAAGAAGCGGAAACTGCGCCTCGAACAGTACTTCACCGCGCGTTC
TGGCTCGTTATTTATCAATCTGGAGGATGAATTAAGACGGCAGCTGCAGC
TCTATCAGCAGAACCCGCAGCAGCAGCAGCAGGCAGACGACTCTGGGGTT
GATGGCAGCCTCCCTGCCACACCGCAGGATCTTCTTCCCACCCCCCGCAG
CGCTTTCAAGGAGGAAGGCGAGATGGAGGGTAGGAGGGAGGAAGAGGAGG
TTGAAGAGCTAATACTGGATGTACGGGACGAGGCAAAATTGCTGATGGAA
ACTGTAGCGCATGATCTAGTCATGAAACCCGAGCTGTGGCTAGACGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGCCAGCAGTCGGGGAGAGGAAGACGG
TGGAGGAGGAGGGGAAGGCAGAAGGGAGGGAGGGATGGAGGGAGGACGGC
TTCGTGGATATCTGCATCTCGAGCACGGATACACCGCACTCCCCCACGGC
CACGTGGGGGGAGGGAGGGAAGGAGGGAGACATGAGGAGGGAAGCGGTGG
GCGGCAAGCCAGTGGAGGGGGACGGCAATAGTGATAAGAGGGGAAAAAGC
CTCGTCTCCTTCTTCCCGAGCGCTTTCCTTGCCCTGTTCAAGCGCCGCGC
CTCGCCCCCCACCGAGCCCTCCACCCCCTCCCCACCCTCTCCATTGGGGA
GAGGCACCACGGCGGGAACAAGGCAATGGCCAGGGAATTGA
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Synonyms
Publications