NO24G02060.1, NO24G02060.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G02060.1
Unique Name	NO24G02060.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2472
Alignment location	chr24:543124..549425 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:543124..549425 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO24G02060.1 vs.
Match: WP_048673544.1 (5-histidylcysteine sulfoxide synthase [Candidatus Competibacter denitrificans])

HSP 1 Score: 296.2 bits (757), Expect = 3.100e-76
Identity = 144/229 (62.88%), Postives = 165/229 (72.05%), Query Frame = 0

Query:  138 WEDNLRAEDAAWLSGSRPLDWWTGSIPLPGHSCPGLLPDGTLTSLPLPRLASSTLTREQLVDYFDNTWALTEVLFAGLQGPEGFYQPPYHGLRHPLIFYYGHPAVLYVNKFRVAGLMDKPINAYFEALFETGVDEMSWDDMTKNSKAWPSVTEVREYRRQVHAAVRKVILTHPEF-STLATKVEDSPFWAVVMGCEHERIHLETSSVLFRELPLSRLAPPAQWPQPHPS 366
            W  NLR E  A L G RP  WWTG    P   CPG  PDGTLTSLPLP LAS   +R+Q++DYFDNTW LTE+L AGL G E F++PPYH LRHP+IFYYGHP VLY+NK R+AGL++KP+N YFE LFETGVDEM WDDM+KN   WPS+ EV  YR+QV+  VR VI THP+  S  A      P WA+ MG EHERIHLETSSVL RELPL  +  PA WP+ HPS
Sbjct:   17 WHKNLRHELGAELIGPRPTWWWTGQ---PPQDCPGRQPDGTLTSLPLPDLASH--SRQQVLDYFDNTWTLTEILLAGLCGEEAFFRPPYHHLRHPMIFYYGHPPVLYINKLRIAGLIEKPLNPYFEQLFETGVDEMRWDDMSKNEMLWPSIQEVHAYRQQVYRTVRGVIETHPDLASGHAPITPQHPLWALFMGFEHERIHLETSSVLIRELPLPFIQRPAAWPKLHPS 240

The following BLAST results are available for this feature:

BLAST of NO24G02060.1 vs.

BLAST of NO24G02060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
WP_048673544.1	3.100e-76	62.88	5-histidylcysteine sulfoxide synthase [Candidatus ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G02060	NO24G02060	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO24G02060.1	NO24G02060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO24G02060.1.cds1	NO24G02060.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds2	NO24G02060.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds3	NO24G02060.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds4	NO24G02060.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds5	NO24G02060.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds6	NO24G02060.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds7	NO24G02060.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds8	NO24G02060.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds9	NO24G02060.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds10	NO24G02060.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds11	NO24G02060.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds12	NO24G02060.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds13	NO24G02060.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds14	NO24G02060.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds15	NO24G02060.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds16	NO24G02060.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds17	NO24G02060.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds18	NO24G02060.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G02060.1.cds19	NO24G02060.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr24:543124..549425-
coding sequence from alignment at chr24:543124..549425-

mRNA sequence

>NO24G02060.1 ID=NO24G02060.1|Name=NO24G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=2472bp
ATGTCCAGCCCATCGTCCAAGCCCGCAGACCTTGCCGCGCCTTGCGGGCG
TGACCCGCCCTCGTTTGCTTTTCACGCACGTCCCCTAAACAGGCAGTACG
ACGGGGTGGACGTCGTATACGCCATGATTCGTATTGCGACATGTCCCAAG
AGGTTTTGCGCGGCCAATAAGCACCGGCAAAAATCGTCCATGAAAAGCTT
TGCCGCCTCCTGCGTCATGTCCCGCCACTCCTCCTTCACCTCCTCCTCCT
CCTCCTCCTCCTCCATCCCCTTCTCTGCTGTCACGAGAAGGACCAAGCCG
ATATACCCTCGAGCCCATCTGCTCCTCCCCTCCCCCTCACTGACATCTCC
CCACCATTCCTCCCTACCCCCTTCGTCCCTTCCGTCCTATCACCATCCAA
ACGTGACCTCGTGGGAAGATAACTTGCGAGCGGAGGATGCGGCATGGCTT
TCGGGATCCCGGCCTCTGGATTGGTGGACTGGTTCCATCCCCTTACCCGG
ACACAGTTGCCCCGGTCTGCTCCCCGACGGAACGCTCACTTCCCTCCCTC
TTCCCCGTCTTGCCTCCTCAACCTTGACGAGGGAGCAGCTGGTGGATTAT
TTCGACAACACATGGGCCCTGACGGAGGTGTTGTTCGCGGGGTTGCAGGG
ACCGGAAGGCTTCTACCAACCGCCGTACCACGGCTTGAGGCACCCTCTGA
TATTTTACTACGGCCATCCGGCCGTGCTGTACGTCAATAAGTTCCGCGTG
GCTGGCTTGATGGATAAGCCTATCAATGCCTACTTCGAGGCTCTGTTTGA
AACGGGCGTGGACGAGATGTCGTGGGACGACATGACCAAGAACAGCAAAG
CATGGCCGTCGGTGACTGAGGTGCGGGAATACCGACGTCAGGTGCATGCG
GCCGTGCGGAAAGTGATTTTGACACACCCGGAATTCAGCACGCTGGCCAC
GAAAGTCGAGGACTCCCCGTTTTGGGCTGTGGTGATGGGCTGTGAGCATG
AGAGGATCCACTTGGAGACGTCCTCGGTGCTCTTCCGCGAGCTCCCGCTG
TCCCGCCTTGCGCCCCCTGCCCAGTGGCCTCAGCCCCACCCCTCCACCTT
CTCTCGCTCCTCCCCCCTCTCCTCCCCCTGCCCACGACCGACTTCCCAGC
GAATCCCTTCCTCCCCCTCCCTGCCCAACGCGGAGGAGGCTACTTCGATC
CGAGCCACTGGAGCCAGGAGGGATGGAAATGGCGCTGTTTCCGAAATACG
CGTCATCCCACCTTCTGGGTTCCCATCGGCCCCTCTGGCTTGCAGGCCTT
CCGCCTTCGGACCGTCTTCGAACAGGTGGACATGCCCTGGTCCTGCCCTG
TGGAGGTTAATTACCACGAGGCATCGGCCTACGCACGGTGGCGCTCTCGA
CAAGATGAAGCCGCCGCAGCCGCAACAGACGCAGCAGGAGGAGGGGGAGG
GGAGGTACAGACTACCCCTTCCTCCCTCCCGTCCTCCCCCCTCCCTACCG
GCTGCTGACGGAGGCCGAGCACCATTGCCTCCGAGCGTCGAGGGACAAGG
GCACGGGCGAGGGCGGGACGGAGGGCGGGACGGAGATCGAGGACGTGGTC
CTTTCCCATTCGGGGGCGGAGCTGCGGCCCATATTCAATTTGAACCTGGC
GTGGGGCATGGCGAGTCCTGTGGATGCTTACCCCCCAACGGCAAGGGGTT
CAGGGACGTGCGGGGGAATGTGTGGGAATGGTGTGAAGATCATTTTTCCC
CTCTTCCAGGATTTGAGCCTCATCCGCACTACATGGATTTCTCCCTTCCC
TGCTTCGATGGGGAGCATCAGATGATAATGGGTGGCTCGTTCGCTTCTAC
GGGAGAAGAAGCTTCTCTGCATGCCCGCTTCCATTTCCGGCCCCATTTTT
TCCAGCACGCGGGCTTCCGGCTTGTCAGGCCCAATAAGGAGGACCCGTCC
CTCCTCACCTCTTGCATGGACAACCAAGGCCCGTACCAGTACGACCAGGA
CACTGAGTGGCTTCAACGATACCTGCACCTCCACTACTCCTCCTCCTCCT
CCTCCTCCTCCTCCTTTTCCTCCTCTCTCCCGTCCTCCTTCCTAGATTTC
CCTGTGAGATGCGCGACACTCCTGGCCGAAGCCGCCGCTGCCACCGGCGG
GAAGACAAGGAAGGCCTTAGATTTGGGCTGTGCGGTGGGTGGTTCCTCCT
TCGCGTTGGCCAGAACGTACGATCACGTGGACGGCCTCGAGCTCTCGCCT
GCCTTCGTCAACGCCGCCCAGCAGCTCAAGGAGCAGGGAGAAATGCCGCA
GCGGGTCTCGTTCAGTGTGGGCGATGCCCTGGCTTTACCTGCAGATATGA
AAGGCACATACGACGCCGTTCTTCTCGCTAATGTTTTATGTCGTCTCCCA
AACCCTCGCGGCGCCCTTCACCTGATTGCAGGGAGGGGGGAAGGAGGGAG
GGAGGGAGGGAGGGAGTGCTGA

protein sequence of NO24G02060.1

>NO24G02060.1-protein ID=NO24G02060.1-protein|Name=NO24G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=824bp
MSSPSSKPADLAAPCGRDPPSFAFHARPLNRQYDGVDVVYAMIRIATCPK
RFCAANKHRQKSSMKSFAASCVMSRHSSFTSSSSSSSSIPFSAVTRRTKP
IYPRAHLLLPSPSLTSPHHSSLPPSSLPSYHHPNVTSWEDNLRAEDAAWL
SGSRPLDWWTGSIPLPGHSCPGLLPDGTLTSLPLPRLASSTLTREQLVDY
FDNTWALTEVLFAGLQGPEGFYQPPYHGLRHPLIFYYGHPAVLYVNKFRV
AGLMDKPINAYFEALFETGVDEMSWDDMTKNSKAWPSVTEVREYRRQVHA
AVRKVILTHPEFSTLATKVEDSPFWAVVMGCEHERIHLETSSVLFRELPL
SRLAPPAQWPQPHPSTFSRSSPLSSPCPRPTSQRIPSSPSLPNAEEATSI
RATGARRDGNGAVSEIRVIPPSGFPSAPLACRPSAFGPSSNRWTCPGPAL
WRLITTRHRPTHGGALDKMKPPQPQQTQQEEGEGRYRLPLPPSRPPPSLP
AADGGRAPLPPSVEGQGHGRGRDGGRDGDRGRGPFPFGGGAAAHIQFEPG
VGHGESCGCLPPNGKGFRDVRGNVWEWCEDHFSPLPGFEPHPHYMDFSLP
CFDGEHQMIMGGSFASTGEEASLHARFHFRPHFFQHAGFRLVRPNKEDPS
LLTSCMDNQGPYQYDQDTEWLQRYLHLHYSSSSSSSSSFSSSLPSSFLDF
PVRCATLLAEAAAATGGKTRKALDLGCAVGGSSFALARTYDHVDGLELSP
AFVNAAQQLKEQGEMPQRVSFSVGDALALPADMKGTYDAVLLANVLCRLP
NPRGALHLIAGRGEGGREGGREC*

mRNA from alignment at chr24:543124..549425-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO24G02060.1 ID=NO24G02060.1|Name=NO24G02060.1|organism=Nannochloropsis oceanica|type=mRNA|length=6302bp|location=Sequence derived from alignment at chr24:543124..549425- (Nannochloropsis oceanica)
ATGTCCAGCCCATCGTCCAAGCCCGCAGACCTTGCCGCGCCTTGCGGGCG
TGACCCGCCCTCGTTTGCTTTTCACGCACGGTACGCATGTCCTTTTCTAT
GCTGGCAGCAAATCAAGCGGTGCAAGTTATTAAAACGCTCTTGTCACGAT
GTACTCGCGAGACCATAGATTTGGAAATAGGTGGTGGGTGGAGGAGAGGC
TGTTGTTGACCGTGAGAACCGGCATGCAAACATCAACTCACCTGACGCAC
AAGCAGCACCGCCCCTCAATCTATGTTCTCCCTTTCGTCCATACCAGTCC
CCTAAACAGGCAGTACGACGGGGTGGACGTCGTATACGCCATGATTCGTA
TTGCGACATGTCCCAAGAGGTTTTGCGCGGCCAATAAGCACCGGCAAAAA
TCGTCCATGAAAAGCTTTGCCGCCTCCTGCGTCATGTCCCGCCACTCCTC
CTTCACCTCCTCCTCCTCCTCCTCCTCCTCCATCCCCTTCTCTGCTGTCA
CGAGAAGGACCAAGCCGATGTTCACCTATCACATCTCTCGCTCCTCTTCC
TTCCACTCCACTGCCTTCCGCTCCAACCCCTCCTTTACGCCTCCTTCTAA
AAAGGCTGCCGTCTCCCTCGCAGATACCCTCGAGCCCATCTGCTCCTCCC
CTCCCCCTCACTGACATCTCCCCACCATTCCTCCCTACCCCCTTCGTCCC
TTCCGTCCTATCACCATCCAAACGTGACCTCGTGGGAAGATAACTTGCGA
GCGGAGGATGCGGCATGGCTTTCGGGATCCCGGCCTCTGGATTGGTGGAC
TGGTATGTGCAAGCAGGGGAGAGAGGGAGGGAAAGGAGGAGGGAGAGAGG
GAGGGAAGGGAGGAAGGGAGGGAGGAAGGACAAGAGATTGAAAGAGAATC
CAAAAACTCAAATATCACGCCGACACTATTTGCCATTTAATACACGTGTT
CCAATACCTCTTCCCTCCACTCTTTCCCTTTCTCTCTCCTGTAGGTTCCA
TCCCCTTACCCGGACACAGTTGCCCCGGTCTGCTCCCCGACGGAACGCTC
ACTTCCCTCCCTCTTCCCCGTCTTGCCTCCTCAACCTTGACGAGGGAGCA
GCTGGTGGATTATTTCGACAACACATGGGCCCTGACGGAGGTGTTGTTCG
CGGGGTTGCAGGGACCGGAAGGCTTCTACCAACCGCCGTACCACGGCTTG
AGGCACCCTCTGTGAGTGATGGGGAGGGACGGACGGGAGAGTGGGAGGGA
GAGAAGAAAACAGGAAGGAAAGGATAAAAAGGGGGAGAGAATATTCCATC
GCTGTCAACATTCCACATGGTTCTCACGTCCTCCTCCCCTCCTTCCCTCA
TTCCCTCCTTGCCTCCCTCCCTCCCTCCTTCCATTTGTCGTCACCTCAGG
ATATTTTACTACGGCCATCCGGCCGTGCTGTACGTCAATAAGTTCCGCGT
GGCTGGCTTGATGGATAAGCCTATCAATGCCTACTTCGAGGCTCTGTTTG
AAACGGGCGTGGACGAGGTAGGGAGGGAGGGAGGGAGGGAGGAAAAGCCC
ATGTTGCACTTAATTTGCCTTTGGGCTCACCAGTGTGGTTAAACCCTCCC
TTTCCCTTTCTCCTTCCCTCCCTTCCTCCCTCTCTTTCCCATTAGATGTC
GTGGGACGACATGACCAAGAACAGCAAAGCATGGCCGTCGGTGACTGAGG
TGCGGGAATACCGACGTCAGGTGCATGCGGCCGTGCGGAAAGTGATTTTG
ACACACCCGGAATTCAGCACGCTGGCCACGAAAGTGAGGGAGGGAGGGAG
GCAGGGGTGGAGGGGAAGAGGGAAGGAGGGGAGGGAGGGGAGGTAGAAAA
ATGTAGAGGAGGAAATCGTCGTTTTATGCTGCGTCCCTCACCCCCTGCCC
TCCCTCCGCCCCTCCGCCCTCCCTCCCTCCCTCTCTCACCTCCTTCTCTC
CCTCCCCAGAGATTGTCGGTTTATGCTGTGTCTCTCACCCCCTGCCCTCC
CTCCCCCCTCCGTCCCTCCCTCTCTGACCTCCCTCCCTCCCCTTAGGTCG
AGGACTCCCCGTTTTGGGCTGTGGTGATGGGCTGTGAGCATGAGAGGATC
CACTTGGAGACGTCCTCGGTGCTCTTCCGCGAGCTCCCGCTGTCCCGCCT
TGCGCCCCCTGCCCAGTGGCCTCAGGTAGGTACGTAGGTAGCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCACGTGTCCCTGTTTCCAA
GCTCCGGAAAAACACCGAAAAGGTGAACATTAAACACATACCCTCCCCCC
CCACTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCTTCCCCCCTCAGCC
CCACCCCTCCACCTTCTCTCGCTCCTCCCCCCTCTCCTCCCCCTGCCCAC
GACCGACTTCCCAGCGAATCCCTTCCTCCCCCTCCCTGCCCAACGCGTGC
GTCTGGGGAAACACAAGCAAGGGCAGGGAGAGAGGGAGGGAGAGAGGGGG
GAGACGCCGGTGGTTTCGGGTGGGACAACGCCTATGGGCAGAAGGAGATG
GAAGTCAAGGCCTGTGAGGTGACGCGGCAAAAAATCTCCAACGGGGAATT
TTATGCCTTCGTGAAGGGAGGAGGCTACTTCGATCCGAGCCACTGGAGCC
AGGAGGGATGGTGAGGAGGGAGGAAGGAAGGGAGGGAGGGAGAAAGAGGA
GAGGCGTCAGTGTCTTAACATCTTCTCCCCCCTCCGAATTTTGCCTTAAT
TTGTCCCTCCCTCCCTCCCTCTCTCCCTCCATCCCTCTCTCCCTCTTTCC
CTTCCTCCCTTCCTCCCTCCGTCCCTTCCTCCCTCAGGAAATGGCGCTGT
TTCCGAAATACGCGTCATCCCACCTTCTGGGTTCCCATCGGCCCCTCTGG
CTTGCAGGTACATGAAGCCCTTCCTCCCTCCCTCCCTTCCTCTCTCCCTC
CCTGTCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTCTCG
TTAAGCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCATCAGGCCTTCCGC
CTTCGGACCGTCTTCGAACAGGTGGACATGCCCTGGTCCTGCCCTGTGGA
GGTTAATTACCACGAGGCATCGGCCTACGCACGGTGGCGCTCTCGACAAG
ATGAAGCCGCCGCAGCCGCAACAGACGCAGCAGGAGGAGGGGGAGGGGAG
GTACAGACTACCCCTTCCTCCCTCCCGTCCTCCCCCCTCCCTACCGGCTG
CTGACGGAGGCCGAGCACCATTGCCTCCGAGCGTCGAGGGACAAGGGCAC
GGGCGAGGGCGGGACGGAGGGCGGGACGGAGATCGAGGACGTGGTCCTTT
CCCATTCGGGGGCGGAGCTGCGGCCCATATTCAATTTGAACCTGGCGTGG
GGCATGGCGAGTCCTGTGGATGCTTACCCCCCAACGGCAAGGGGTTCAGG
GACGTGCGGGGGAATGTGTGGGAATGGTAAGAGGGAGGGAGGGAGGGAGG
GGGGAGGGGGGAGATGGAGGGGAGGGGGGTGGGAGGGGAGGAGTTGATTG
CCTGGACGGGGGAACGTAGGGGGTTGGTGAGAGGGAGGGAAGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGAAAGGGAGGGAGGGAGGGAGGGATT
CACATCTACTGCCCAGACGTCCTTGTCTTTGATCTCAGTAAAATAAATCT
CTCCCTTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCAGGTGT
GAAGATCATTTTTCCCCTCTTCCAGGATTTGAGCCTCATCCGCACTACAT
GGATTTCTCCCTTCCCTGCTTCGATGGGGAGCATCAGATGATAATGGTGC
GCCCTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCACTTTCGATCC
CCTCCCTTCCTTTCCTCCTCTCCTTCCTGCATCGCTTCCTGGGATTGGAT
TCTCTCGCTTTCATGTTTCAAATTATATTCTTCCCATCTCATCATATTTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TACCTCCCTCCTTCTCTCCCTCAGGGTGGCTCGTTCGCTTCTACGGGAGA
AGAAGCTTCTCTGCATGCCCGCTTCCATTTCCGGCCCCATTTTTTCCAGC
ACGCGGGCTTCCGGCTTGTCAGGCCCAATAAGGAGGTAGGTAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGGAGGAGGGAGGGAGGGAAGGAGGGTAGACAGGGAGGTGCTGCTGG
GTGGTAAAAGGAGAGGAAGAGAAAGAGGGAGGGAGAAAGGGAGGGAAGGA
GGGAGGGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
GGGGCAAGGGTGGTGTTCGCTTTTTTCCCTCATTACGCCCTTGGCTTTCG
TCTTCCCTTCCTCTTGACAGGGATAGACATTTAGGGGAGGGGGAAGGGAG
GAAGGGAGGGAGGGAGGAAGGGAGGGCTCCTGTTTATAAGGGATAAGCAG
GACGGACTGGCAGTCTCAAGGAAGAAGGGAGGAAGGGAGGGAAGGAAGGA
GGGAGGGAAGGAGGGACTCCCTCGTTGTCATGAGGGGTCGAATCGGGCCT
CATGCTGCTGCTGCTGCTGCTGCTGCTGCCCTGGTTGTAATTTTGGCTAT
GATTGTCGCTGCTGCTGCTGCTGCTGTAGCAAGAAGCTGCGAAGACCTCT
CTTCAACTGCCTGCATAATCACTCACCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCAGGACCCGTCCCTCCTCACCTCTTGCATGGACAACCAAGGCC
CGTACGTAGGCGAGAACCCCTACCGGTCCTCCCTCCCTTCCTCCCCCCTC
CCTCCTCCTCTTCCTCCCCCTCCACCGCTGCTGCCGCCGTTGCCCCCTGC
CCTTCCTCCCTCCCTTCTCAAGCACAATCTGACGCCTCCTATCGGGCCAA
TACGCAGCAGTACGACCAGGACACTGAGTGGCTTCAACGATACCTGCACC
TCCACTACTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTTCCTCCTCTCTC
CCGTCCTCCTTCCTAGATTTCCCTGTGAGATGCGCGACACTCCTGGCCGA
AGCCGCCGCTGCCACCGGCGGGAAGACAAGGAAGGCCTTAGATTTGGGTA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAA
GGAAGGAAGGAGGGAGGGAAGGAGGGAAGCAGAGAGGGAAGGTGGAGCAA
CGCACTTATTTCCTCGCCTGCTGTCCATCAACGCCTCAACATTTTCTGTA
TTTCCATACCCTGGGACTTTATCTTCTCCCTCCCTCCCTCCCTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCAGGCTGTGCGGTGGG
TGGTTCCTCCTTCGCGTTGGCCAGAACGTACGATCACGTGGACGGCCTCG
AGCTCTCGCCTGCCTTCGTCAACGTATGTCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTTCTTCATGCTGTCTGGCTCCAGAGACCACCCG
AAGAAACCCTGACCGCCCTCCCTCCTACCTCTCCATTTTTTCTTCTCCCG
CCCCTGTACTGTTTCGTCCGGCCTCTCTGACCATCTTTCCCTCCCTCCCT
CCCTCCCTCCTTCCCTGCAGGCCGCCCAGCAGCTCAAGGAGCAGGGAGAA
ATGCCGTATGAGTTGAAGAAGGAGGGAGAGACCTTCCTCTCTTGCGTGGC
GCGTGTACCCGGGGGGTCGATAGGCAGCGGGTCTCGTTCAGTGTGGGCGA
TGCCCTGGCTTTACCTGCAGATATGAAAGGTGAGGAGGGCAGGGAAAGGA
GGGGAGGGAAAGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCACAAATCCAGGGC
AACTGTGTCTGAAGGGAGGAATGAAGGGAGGAAAGAAAGATGGATGTCGT
CCTACCATCGTCTCAGGAGATGCAAGCTCACGTCCCTCCCTCTCTCCCTC
CCTCCCTCCCTCCCTCCTTCCCTCCCTTGATAGGCACATACGACGCCGTT
CTTCTCGCTAATGTTTTATGTCGTCTCCCAAACCCTCGCGGCGCCCTTCA
CCTGATTGCAGGGAGGGGGGAAGGAGGGAGGGAGGGAGGGAGGGAGTGCT
GA

Coding sequence (CDS) from alignment at chr24:543124..549425-

>NO24G02060.1 ID=NO24G02060.1|Name=NO24G02060.1|organism=Nannochloropsis oceanica|type=CDS|length=2472bp|location=Sequence derived from alignment at chr24:543124..549425- (Nannochloropsis oceanica)
ATGTCCAGCCCATCGTCCAAGCCCGCAGACCTTGCCGCGCCTTGCGGGCG
TGACCCGCCCTCGTTTGCTTTTCACGCACGTCCCCTAAACAGGCAGTACG
ACGGGGTGGACGTCGTATACGCCATGATTCGTATTGCGACATGTCCCAAG
AGGTTTTGCGCGGCCAATAAGCACCGGCAAAAATCGTCCATGAAAAGCTT
TGCCGCCTCCTGCGTCATGTCCCGCCACTCCTCCTTCACCTCCTCCTCCT
CCTCCTCCTCCTCCATCCCCTTCTCTGCTGTCACGAGAAGGACCAAGCCG
ATATACCCTCGAGCCCATCTGCTCCTCCCCTCCCCCTCACTGACATCTCC
CCACCATTCCTCCCTACCCCCTTCGTCCCTTCCGTCCTATCACCATCCAA
ACGTGACCTCGTGGGAAGATAACTTGCGAGCGGAGGATGCGGCATGGCTT
TCGGGATCCCGGCCTCTGGATTGGTGGACTGGTTCCATCCCCTTACCCGG
ACACAGTTGCCCCGGTCTGCTCCCCGACGGAACGCTCACTTCCCTCCCTC
TTCCCCGTCTTGCCTCCTCAACCTTGACGAGGGAGCAGCTGGTGGATTAT
TTCGACAACACATGGGCCCTGACGGAGGTGTTGTTCGCGGGGTTGCAGGG
ACCGGAAGGCTTCTACCAACCGCCGTACCACGGCTTGAGGCACCCTCTGA
TATTTTACTACGGCCATCCGGCCGTGCTGTACGTCAATAAGTTCCGCGTG
GCTGGCTTGATGGATAAGCCTATCAATGCCTACTTCGAGGCTCTGTTTGA
AACGGGCGTGGACGAGATGTCGTGGGACGACATGACCAAGAACAGCAAAG
CATGGCCGTCGGTGACTGAGGTGCGGGAATACCGACGTCAGGTGCATGCG
GCCGTGCGGAAAGTGATTTTGACACACCCGGAATTCAGCACGCTGGCCAC
GAAAGTCGAGGACTCCCCGTTTTGGGCTGTGGTGATGGGCTGTGAGCATG
AGAGGATCCACTTGGAGACGTCCTCGGTGCTCTTCCGCGAGCTCCCGCTG
TCCCGCCTTGCGCCCCCTGCCCAGTGGCCTCAGCCCCACCCCTCCACCTT
CTCTCGCTCCTCCCCCCTCTCCTCCCCCTGCCCACGACCGACTTCCCAGC
GAATCCCTTCCTCCCCCTCCCTGCCCAACGCGGAGGAGGCTACTTCGATC
CGAGCCACTGGAGCCAGGAGGGATGGAAATGGCGCTGTTTCCGAAATACG
CGTCATCCCACCTTCTGGGTTCCCATCGGCCCCTCTGGCTTGCAGGCCTT
CCGCCTTCGGACCGTCTTCGAACAGGTGGACATGCCCTGGTCCTGCCCTG
TGGAGGTTAATTACCACGAGGCATCGGCCTACGCACGGTGGCGCTCTCGA
CAAGATGAAGCCGCCGCAGCCGCAACAGACGCAGCAGGAGGAGGGGGAGG
GGAGGTACAGACTACCCCTTCCTCCCTCCCGTCCTCCCCCCTCCCTACCG
GCTGCTGACGGAGGCCGAGCACCATTGCCTCCGAGCGTCGAGGGACAAGG
GCACGGGCGAGGGCGGGACGGAGGGCGGGACGGAGATCGAGGACGTGGTC
CTTTCCCATTCGGGGGCGGAGCTGCGGCCCATATTCAATTTGAACCTGGC
GTGGGGCATGGCGAGTCCTGTGGATGCTTACCCCCCAACGGCAAGGGGTT
CAGGGACGTGCGGGGGAATGTGTGGGAATGGTGTGAAGATCATTTTTCCC
CTCTTCCAGGATTTGAGCCTCATCCGCACTACATGGATTTCTCCCTTCCC
TGCTTCGATGGGGAGCATCAGATGATAATGGGTGGCTCGTTCGCTTCTAC
GGGAGAAGAAGCTTCTCTGCATGCCCGCTTCCATTTCCGGCCCCATTTTT
TCCAGCACGCGGGCTTCCGGCTTGTCAGGCCCAATAAGGAGGACCCGTCC
CTCCTCACCTCTTGCATGGACAACCAAGGCCCGTACCAGTACGACCAGGA
CACTGAGTGGCTTCAACGATACCTGCACCTCCACTACTCCTCCTCCTCCT
CCTCCTCCTCCTCCTTTTCCTCCTCTCTCCCGTCCTCCTTCCTAGATTTC
CCTGTGAGATGCGCGACACTCCTGGCCGAAGCCGCCGCTGCCACCGGCGG
GAAGACAAGGAAGGCCTTAGATTTGGGCTGTGCGGTGGGTGGTTCCTCCT
TCGCGTTGGCCAGAACGTACGATCACGTGGACGGCCTCGAGCTCTCGCCT
GCCTTCGTCAACGCCGCCCAGCAGCTCAAGGAGCAGGGAGAAATGCCGCA
GCGGGTCTCGTTCAGTGTGGGCGATGCCCTGGCTTTACCTGCAGATATGA
AAGGCACATACGACGCCGTTCTTCTCGCTAATGTTTTATGTCGTCTCCCA
AACCCTCGCGGCGCCCTTCACCTGATTGCAGGGAGGGGGGAAGGAGGGAG
GGAGGGAGGGAGGGAGTGCTGA

Synonyms

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