NO24G01800.1, NO24G01800.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G01800.1
Unique NameNO24G01800.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length252
Alignment locationchr24:477082..477682 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:477082..477682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01800.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01800NO24G01800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G01800.1NO24G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G01800.1.cds1NO24G01800.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01800.1.cds2NO24G01800.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01800.1.cds3NO24G01800.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G01800.1 ID=NO24G01800.1|Name=NO24G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=252bp
ATGCTCCGCGTCGCCTTCCTCAAGAACCTCCACTCTGTCGTCCGTACTCG
CCCTCGGCACTACCAACAGACCGTCCATCACGCCTCCACAACCCGTTCTG
TTTGGCTGTGCGATCCCGCGGTTAAACTTCAACTCGACATAGTCGACATC
ACCGGCTTCCTAATTTCCACTTTCATCGTTTACTACTCCACTACCTCACC
CTACATCCGCTTCAAAGTAGATCGTTATCACGTCGTCCGTGTCCGGGTGT
AG
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protein sequence of NO24G01800.1

>NO24G01800.1-protein ID=NO24G01800.1-protein|Name=NO24G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=84bp
MLRVAFLKNLHSVVRTRPRHYQQTVHHASTTRSVWLCDPAVKLQLDIVDI
TGFLISTFIVYYSTTSPYIRFKVDRYHVVRVRV*
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mRNA from alignment at chr24:477082..477682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G01800.1 ID=NO24G01800.1|Name=NO24G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=601bp|location=Sequence derived from alignment at chr24:477082..477682- (Nannochloropsis oceanica)
ATGCTCCGCGTCGCCTTCCTCAAGAACCTCCACTCTGTCGTCCGTACTCG
GTAGGTTCGTGTAGATAGGGGATGCGGGAAGGGTTTAGAAGTGAGTTAAT
GAATTCAATAGAATGCATTTTGTGAGGCGGGTGGATTATAGCATTGGGAA
CAAGAATCTCATACAACGTTCGCTCCCGCACACGCACAGCCCTCGGCACT
ACCAACAGACCGTCCATCACGCCTCCACAACCCGTTCTGTTTGGCTGTGC
GATCCCGCGGTACGTGACAGTTCGTAGCTGTAAAACTCCGGACAAAGGAA
CCAGTTGCAATTGTTATTCTCCTTGTTACACATGATTCCTTTCTCTCATT
TCCCTTGCTTTCCCCTCATTTCTCCGTCTTTCCTCTATGGTTTTCGTTCA
TGTTTCTCATGGATCTTGTCCGCGCTCACTCCGTCCCTTCGTCCCTCCGC
TCCACCTCCCACCTATAAGGTTAAACTTCAACTCGACATAGTCGACATCA
CCGGCTTCCTAATTTCCACTTTCATCGTTTACTACTCCACTACCTCACCC
TACATCCGCTTCAAAGTAGATCGTTATCACGTCGTCCGTGTCCGGGTGTA
G
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Coding sequence (CDS) from alignment at chr24:477082..477682-

>NO24G01800.1 ID=NO24G01800.1|Name=NO24G01800.1|organism=Nannochloropsis oceanica|type=CDS|length=252bp|location=Sequence derived from alignment at chr24:477082..477682- (Nannochloropsis oceanica)
ATGCTCCGCGTCGCCTTCCTCAAGAACCTCCACTCTGTCGTCCGTACTCG
CCCTCGGCACTACCAACAGACCGTCCATCACGCCTCCACAACCCGTTCTG
TTTGGCTGTGCGATCCCGCGGTTAAACTTCAACTCGACATAGTCGACATC
ACCGGCTTCCTAATTTCCACTTTCATCGTTTACTACTCCACTACCTCACC
CTACATCCGCTTCAAAGTAGATCGTTATCACGTCGTCCGTGTCCGGGTGT
AG
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Synonyms
Publications