NO24G01640.1, NO24G01640.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G01640.1
Unique NameNO24G01640.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1110
Alignment locationchr24:437024..438269 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:437024..438269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01640.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01640NO24G01640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G01640.1NO24G01640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G01640.1.cds1NO24G01640.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01640.1.cds2NO24G01640.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G01640.1 ID=NO24G01640.1|Name=NO24G01640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1110bp
ATGACGGAAGCGGCTTGCGCGGTTGGCGAAGGAGGAAAAGGAGGAAGAGG
AGGAGGAAACTATTTTCAAGATGTCCCGCAGTACCATCAACAGCATTTTT
ACCAGACAGCTCCGCCTTTGTCACATCCGCCTCCTCTGCAACCACATCTT
GATCAACCCCACCAACAGCAGCAGCAACAACAGACATATCAGCCGCAGCA
AATACCGCACCACCTATACCAGCACCAGCATCAGCAACAGCTGCAACAAC
AGCACCATCAGCAACAGTTTTATCAATACCGAGCAGGGCCATCGCTGCAA
TCCCAACAGGTGCCGGCTCTGCTGTCATCGTCGCTTCACGACCACTACCA
GCAGCCGTCACTTTTCTTACATCACCATCAACAGCTCCAATACCCGCCCC
CACCTTGGCAGCGGCGGCGACAAGCGCAGCAGCAGCAGCAGCCGCACGCT
TATGAATACCACCAGGCACTACAATTTCCCCCTCAGTCGTACGTGATCCG
GCAGCCACCACTGTTGGCTCCACAGCAGCAGCAGACGTACCACCACCACG
CCCAACCCCACCACCATCAGCAGCTGCGTCAGCAGCAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCTGTGGCAACATGGGGAAGAAGAGCAACAGTACGCTT
CCTACCCATACCATCAGTCGCCCCCGCTCCCCCCCAGTCGCCTCAACAGC
AGAGGCATCAGCAGCAGCAACACCAGCAGCAATGGCAGCAAATACGCAAG
AAGGACGATAATCAAAACCCACATGCCTTTGAAGATACTTTTGCGGCCTT
CACCCAAGACCTCTCGAGAGGAGGAACACCAGCACCAGCACCAGCAGCAG
CAGTGGGAGGGGTGGAGAAATATCTCATCCGCTTCCAACGTCCGTGTCAA
CGGGCGAGTGGAGAGCCTGGCCTCCATTGATGGTATCGACAGGGCCTCAA
CACGCAGCATCAGCTTCAGGGTTACCCATCCCTCATATTGCTTTTGGAGG
TGGCGGCGGTCACAGCAGCAGCAGCAGCAGCAACAGCAACGTGCCACGCC
CATTCAATAG
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protein sequence of NO24G01640.1

>NO24G01640.1-protein ID=NO24G01640.1-protein|Name=NO24G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MTEAACAVGEGGKGGRGGGNYFQDVPQYHQQHFYQTAPPLSHPPPLQPHL
DQPHQQQQQQQTYQPQQIPHHLYQHQHQQQLQQQHHQQQFYQYRAGPSLQ
SQQVPALLSSSLHDHYQQPSLFLHHHQQLQYPPPPWQRRRQAQQQQQPHA
YEYHQALQFPPQSYVIRQPPLLAPQQQQTYHHHAQPHHHQQLRQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQLWQHGEEEQQYASYPYHQSPPLPPSRLNS
RGISSSNTSSNGSKYARRTIIKTHMPLKILLRPSPKTSREEEHQHQHQQQ
QWEGWRNISSASNVRVNGRVESLASIDGIDRASTRSISFRVTHPSYCFWR
WRRSQQQQQQQQQRATPIQ*
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mRNA from alignment at chr24:437024..438269+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G01640.1 ID=NO24G01640.1|Name=NO24G01640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1246bp|location=Sequence derived from alignment at chr24:437024..438269+ (Nannochloropsis oceanica)
ATGACGGAAGCGGCTTGCGCGGTTGGCGAAGGAGGAAAAGGAGGAAGAGG
AGGAGGAAACTATTTTCAAGATGTCCCGCAGTACCATCAACAGCATTTTT
ACCAGACAGCTCCGCCTTTGTCACATCCGCCTCCTCTGCAACCACATCTT
GATCAACCCCACCAACAGCAGCAGCAACAACAGACATATCAGCCGCAGCA
AATACCGCACCACCTATACCAGCACCAGCATCAGCAACAGCTGCAACAAC
AGCACCATCAGCAACAGTTTTATCAATACCGAGCAGGGCCATCGCTGCAA
TCCCAACAGGTGCCGGCTCTGCTGTCATCGTCGCTTCACGACCACTACCA
GCAGCCGTCACTTTTCTTACATCACCATCAACAGCTCCAATACCCGCCCC
CACCTTGGCAGCGGCGGCGACAAGCGCAGCAGCAGCAGCAGCCGCACGCT
TATGAATACCACCAGGCACTACAATTTCCCCCTCAGTCGTACGTGATCCG
GCAGCCACCACTGTTGGCTCCACAGCAGCAGCAGACGTACCACCACCACG
CCCAACCCCACCACCATCAGCAGCTGCGTCAGCAGCAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCTGTGGCAACATGGGGAAGAAGAGCAACAGTACGCTT
CCTACCCATACCATCAGTCGCCCCCGCTCCCCCCCAGTCGCCTCAACAGC
AGAGGCATCAGCAGCAGCAACACCAGCAGCAATGGCAGCAAATACGCAAG
AAGGACGATAATCAAAACCCACATGCCTTTGAAGATACTTTTGCGGCCTT
CACCCAAGACCTCTCGAGAGGAGGAAGTAGCATGCTCCCTCCCGCAATCC
CTTGCATGACGCACCGTCCTGATGTATCCTACTTCAGCGCTCCTACTGCC
GCTTGTGCGCTTTCCCCAAATCCTGCTGACACCAAAGCAACGTCTCTCCC
TCCCTCGGACAGCACCAGCACCAGCACCAGCAGCAGCAGTGGGAGGGGTG
GAGAAATATCTCATCCGCTTCCAACGTCCGTGTCAACGGGCGAGTGGAGA
GCCTGGCCTCCATTGATGGTATCGACAGGGCCTCAACACGCAGCATCAGC
TTCAGGGTTACCCATCCCTCATATTGCTTTTGGAGGTGGCGGCGGTCACA
GCAGCAGCAGCAGCAGCAACAGCAACGTGCCACGCCCATTCAATAG
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Coding sequence (CDS) from alignment at chr24:437024..438269+

>NO24G01640.1 ID=NO24G01640.1|Name=NO24G01640.1|organism=Nannochloropsis oceanica|type=CDS|length=1110bp|location=Sequence derived from alignment at chr24:437024..438269+ (Nannochloropsis oceanica)
ATGACGGAAGCGGCTTGCGCGGTTGGCGAAGGAGGAAAAGGAGGAAGAGG
AGGAGGAAACTATTTTCAAGATGTCCCGCAGTACCATCAACAGCATTTTT
ACCAGACAGCTCCGCCTTTGTCACATCCGCCTCCTCTGCAACCACATCTT
GATCAACCCCACCAACAGCAGCAGCAACAACAGACATATCAGCCGCAGCA
AATACCGCACCACCTATACCAGCACCAGCATCAGCAACAGCTGCAACAAC
AGCACCATCAGCAACAGTTTTATCAATACCGAGCAGGGCCATCGCTGCAA
TCCCAACAGGTGCCGGCTCTGCTGTCATCGTCGCTTCACGACCACTACCA
GCAGCCGTCACTTTTCTTACATCACCATCAACAGCTCCAATACCCGCCCC
CACCTTGGCAGCGGCGGCGACAAGCGCAGCAGCAGCAGCAGCCGCACGCT
TATGAATACCACCAGGCACTACAATTTCCCCCTCAGTCGTACGTGATCCG
GCAGCCACCACTGTTGGCTCCACAGCAGCAGCAGACGTACCACCACCACG
CCCAACCCCACCACCATCAGCAGCTGCGTCAGCAGCAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCTGTGGCAACATGGGGAAGAAGAGCAACAGTACGCTT
CCTACCCATACCATCAGTCGCCCCCGCTCCCCCCCAGTCGCCTCAACAGC
AGAGGCATCAGCAGCAGCAACACCAGCAGCAATGGCAGCAAATACGCAAG
AAGGACGATAATCAAAACCCACATGCCTTTGAAGATACTTTTGCGGCCTT
CACCCAAGACCTCTCGAGAGGAGGAACACCAGCACCAGCACCAGCAGCAG
CAGTGGGAGGGGTGGAGAAATATCTCATCCGCTTCCAACGTCCGTGTCAA
CGGGCGAGTGGAGAGCCTGGCCTCCATTGATGGTATCGACAGGGCCTCAA
CACGCAGCATCAGCTTCAGGGTTACCCATCCCTCATATTGCTTTTGGAGG
TGGCGGCGGTCACAGCAGCAGCAGCAGCAGCAACAGCAACGTGCCACGCC
CATTCAATAG
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Synonyms
Publications