NO24G01520.1, NO24G01520.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G01520.1
Unique Name	NO24G01520.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3875
Alignment location	chr24:404594..408922 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:404594..408922 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO24G01520.1 vs.
Match: XP_005854537.1 (Fe-Fe hydrogenase [Nannochloropsis gaditana CCMP526]; EKU21819.1 Fe-Fe hydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 706.4 bits (1822), Expect = 8.600e-200
Identity = 339/400 (84.75%), Postives = 368/400 (92.00%), Query Frame = 0

Query:  299 CVAVCPTGAMRERHDLFHVIDALQNKEVVKVAAVAPSVRVAISEEFDLPPGRISMGQIVVGLKQLGFDYVFDTNFAADLTIMEEGTEFLSRLKKEPGAGPLPMFTSCCPGWINLVEKNYPYLIPHLSSCKSPQGMMGAAVKNVWAPRVGRDPADVVNVSIMPCTAKKGEAHRPADRAATYSAKLDTTVPNNDYVLTTREIGRLFRLHKISLPALESQAPDDPLGESTGAAVLFGATGGVMEAALRTAYELASGGQPLPKIEMSDIRGLQGVKSARVCIPNPDGKGPGAVVRVGVVHGTAETRALLERMKSGDESAQFDFVEVMACRGGCIGGGGQSKSDDPFVLQKRIAHVYNLDVESAIRKSHENPSIKKLYQEALGEPGGHLSHQLLHTQYTDRSQDT 699
            C AVCPTGAMRERH+LF VIDAL+++  VKVAAVAPSVRVA+SEEF LPPGR+SMGQIV GLK LGFDYVFDTNF+ADLTIMEEGTE LSRL+K+PGAGPLPMFTSCCPGWINLVEKNYP LIPHLSSCKSPQGMMGA +KNVWAPR+ RDPADVV+VS+MPCTAKKGEAHRPADR ATYS+K+D  VPNNDYVLTTREIGRLFRL KI+LPAL++Q PDDPLGESTGAAVLFGATGGVMEAALRTAYELASGGQ LPK+EMSDIRGLQGVKS+RVCIPNPDGKGPGAVVRVGVVHGTAETRALLERMK GD +AQFDFVEVMACRGGCIGGGGQSKSDD  VLQKR+AHVYNLD +SA+RKSH+NPSI+KLY+  +G PG   SH LLHT Y DRS+ T
Sbjct:  227 CAAVCPTGAMRERHELFQVIDALEDQSRVKVAAVAPSVRVAMSEEFGLPPGRVSMGQIVAGLKLLGFDYVFDTNFSADLTIMEEGTELLSRLRKDPGAGPLPMFTSCCPGWINLVEKNYPELIPHLSSCKSPQGMMGALIKNVWAPRLERDPADVVSVSVMPCTAKKGEAHRPADRGATYSSKIDGPVPNNDYVLTTREIGRLFRLRKIALPALDAQVPDDPLGESTGAAVLFGATGGVMEAALRTAYELASGGQELPKMEMSDIRGLQGVKSSRVCIPNPDGKGPGAVVRVGVVHGTAETRALLERMKLGDPAAQFDFVEVMACRGGCIGGGGQSKSDDALVLQKRMAHVYNLDEKSALRKSHDNPSIQKLYESEMGRPGSARSHALLHTHYADRSEQT 626

The following BLAST results are available for this feature:

BLAST of NO24G01520.1 vs.

BLAST of NO24G01520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854537.1	8.600e-200	84.75	Fe-Fe hydrogenase [Nannochloropsis gaditana CCMP52...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G01520	NO24G01520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO24G01520.1	NO24G01520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO24G01520.1.cds1	NO24G01520.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G01520.1.cds2	NO24G01520.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G01520.1.cds3	NO24G01520.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr24:404594..408922-
coding sequence from alignment at chr24:404594..408922-

mRNA sequence

>NO24G01520.1 ID=NO24G01520.1|Name=NO24G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=3875bp
CAACAGCAGCAGCAGCAGCAGCAGTAGCACGGGCTTTTTTCAAGTCCATC
CGGTAGGCCAAGGTGGGTATAAAATGATGCAGACAGTAAGCTTGCAGCAA
AGATGGAGGACGCAAGAGCCGTGTTTGGGGTGTTTCGGCGTCCATGGGAA
TGTTCATCAAAACGAGCTTGTTCCCCTGGTGGTACTGAAGGGGAAGAAGA
GGACAGTCTTCATCCCCTGTCGCTGCTGCTGCTGCTGCTGTTACTGTTGA
GGAGAAGGTAGATTGATGGAGGGTATGGGCGAGGTGGAGAGCGAGGGCTT
TGCCGGCATTGGGGGAGGTGAAGTCCGCAGTAAAGGAAGGGAGGAGGAGG
TTGGGAGGAGGGTGCTCTGTGCTGATGCTGGTGCCGCACTTAAAACCATT
GCTGCTGCAGCTGCTGTTGTTGTTGATCTTGCTATTGTTGCTGCTGCTCG
GATGCATCACGCCTCCTCCTTGTCCTCCTCCTCTGGTTTCTTCTGTCACT
GCCTTCCGAATTTCCCCCTCAATTGACGCACACAACTCCTCCACCAACCT
CCACTCCCCCCCCCTTCCCTCCCATCGCCAATTCGCCGCATAAATTTCTC
TCGTTCGTCATTCTTAATATTGAAGATGAGCATGGAGGGACGGCGTCGCT
TGGCCATGCTTCGAACAAGGGAAATGAGAAGAGGGAGGGAGGCAGAGGAG
GCTGTACAAGCAACCGGCACCACTGGCGTTCTCCCTGCAGCTGCTTTTCC
TGCTGTCCCTGCCACATATAGTGATCGTGCTGATCCGACTGCTACTGCTC
CTGCTACTGCTGTTGCTGATGGCGGTGATACGGGCTTCTCCTCCTCCACA
GCCGTTTCTGCCACCCTTCTTCTTCCTGCACGTCCTTCCTCTTCATCCAT
CCCTTGAGTCGCCACCTTTGCTTTGTTAAAGGGCTCTATCACCACGAGTG
CCGCGTCCACTTCCCGCATTGCCTCCCATGTCTTATTCCTCTTCTTATCT
CCCAGTCGTCCCGTGTCATCCACACCTGCTGTATCTAGTAGTTTGATCGG
CCCCAAACCATGTATTTCCATGATGGCTGTCTTGATATCTGATGTTGTCC
CAGGCGTGGCATCAACGATACTTGTAGCTTGTTGCGTCAAGGCATTGAGA
ACTGTGGACTTGCCGGCATTCATCTCTCCGACTAAGCCGAGGAGGAGACG
GTGTAGACCAGAAGAATAGGAGGAGGAAGTGGTGCTGAAGGAGGAGGACG
AGGAGGAGGAATTGGTGCTGCAGGAGCACAAAGACGCACAAGGCGATGCG
AAGAAGGGCGACAAGGACGAGGCTCTGTCGAGGGAGGTGTCGTATATAGG
CCGTGATGGCCTGAGCAATTTGGACGTGTACGGCCCTGGCAGCTTGATGA
GGCCAAGGACCATGCGAATGCCGCTCTTCTTCAACAGAAAGCCTTCCACC
TATCCCAAACTTACCTGGGTAGTGATCGCCCATGTCTCATCCCTTCCCGG
TACCAACCCCAAGAAGACGACCCTATAAAGAAACTGCGTGGCGGCATGGC
CTGTAGCGTGTGGAGTGGGTGGCGTGATCTTATGGCCAAGATAGGCATGA
TCCAAGTTTAAAGCCCAGCCCATGACTCGGAAGTTGAACCGATGTATCGC
TCTGTTTTTCTCTGCTACTGAGACGCTCATTGACCTTCCCGCGTGCCCGC
ACGCCCAAATCCCGCAATCGCACAGGCTCCACCGACCATGCTTGGCCCCT
TCTTATTCGCATGGGCTCGGATTGGGCCGACGGCTGCCTCCGCTGCTGCA
TTGCGCCGCCTTCCCAAGCCCCGTACCTTTGCTGCTGCTTCCTTCTCGAC
TACACCCCCTGCCATCCCCACCACCTCACCCACCGCCACATTTCCTGCAG
AAGAGCAGCTGGTAAATGTAGAAATCAATGGCCGGAGCATTGCCGTGCCC
GCCTATGCCACCATTCTCGAGGCTGCGCGGGCTGCAGGGGCGTTTGTGCC
CACGCTTTGCGCCCACCCTTCCATCCCTGCCCGCGCAACATGCCGTATTT
GCTTGGTGGAGCTCGAGACAGGCCAAGGCACGAAGAAGGTGGTAGGCCCC
GCTTCACCTACGGATGCAAGGAGGGTCGAAAAGCTTGTGCCAATGAGTAA
GCTTGTCCCGGCGTGCATTACCCAAGTAAAGGAGGGACAACGCATCCACA
CACATTCGCCAGATGTCCTGGAGAACGTGCGTTTTATTCTCCAGCTTATG
CGGGCCAAACATCCCAACACTTGTCAAACATGTGATGCCGATGGGAATTG
TACATTTCAGGACTTGCTGTACCGTTATCAGGTTGAGGACATTGCCCCCA
CAGAGATTCGCAAGAATTTTGAACACCACCACGAATGGGACGGTGGGGCT
AGCATTGGTACGCCCACTGACAGCCAAACACCCGCTCCCTCAAAAGACAC
ACCCTATGGCGCCATTACTTTTGATCCAGACAAATGTGTCAAGTGCGGGC
GGTGTGTGGCAGTCTGCCAGAAGATTCAAGGGGTCGGAGCGATTGGTTTT
GTAGGTCGTGGCGCGGACATGCATTTGTCTACCATGCAGGGCTTGCCATT
CGATCAAACCAAATGCATCGAGTGCGGTCAGTGCGTCGCCGTCTGCCCCA
CGGGTGCCATGCGTGAGCGCCACGATCTTTTTCATGTCATTGATGCTTTG
CAAAATAAGGAGGTAGTGAAGGTCGCTGCAGTGGCCCCCTCAGTCCGCGT
GGCGATCAGCGAAGAATTCGATCTTCCTCCTGGCAGGATCTCCATGGGAC
AGATCGTCGTCGGTCTGAAGCAGCTAGGATTCGACTATGTGTTCGACACG
AACTTTGCCGCTGACTTGACCATTATGGAGGAAGGGACTGAATTTCTTTC
CCGTCTCAAGAAAGAGCCGGGCGCAGGACCTCTTCCCATGTTCACTTCTT
GTTGCCCTGGGTGGATCAATTTGGTTGAAAAAAACTACCCTTATCTAATT
CCTCATTTATCGAGCTGCAAATCTCCTCAAGGGATGATGGGGGCAGCGGT
TAAAAATGTGTGGGCGCCTCGCGTAGGACGCGACCCTGCAGATGTAGTCA
ATGTTAGCATAATGCCCTGCACTGCGAAGAAGGGAGAAGCGCATCGCCCT
GCCGATCGAGCCGCCACCTACTCCGCTAAGCTCGATACGACGGTGCCCAA
CAACGATTACGTCCTAACCACGCGAGAGATCGGACGCCTGTTTCGATTGC
ACAAGATCTCTCTTCCTGCTTTGGAATCACAGGCTCCTGATGATCCGCTA
GGGGAGAGCACAGGGGCTGCGGTATTATTCGGGGCGACGGGAGGGGTAAT
GGAAGCGGCGTTGCGAACAGCTTATGAGCTTGCATCGGGAGGGCAGCCAT
TGCCAAAAATTGAGATGAGTGATATCAGAGGGCTGCAGGGCGTGAAGTCC
GCGCGGGTGTGTATTCCGAATCCAGATGGGAAGGGACCGGGGGCTGTGGT
TCGTGTGGGGGTCGTGCATGGGACGGCAGAAACGCGGGCATTGCTGGAGA
GGATGAAGTCCGGGGATGAATCGGCACAGTTTGACTTCGTTGAGGTGATG
GCTTGTAGGGGAGGATGCATAGGGGGAGGCGGGCAAAGCAAGAGCGACGA
TCCGTTTGTGCTTCAGAAGAGGATTGCACATGTGTATAATTTAGATGTGG
AGAGCGCGATAAGGAAAAGTCACGAGAACCCGAGCATCAAGAAATTATAT
CAAGAGGCGTTAGGTGAACCAGGGGGACACTTGAGCCATCAGCTGTTACA
TACTCAATACACAGATCGGTCGCAAGACACTAAATAAATAGAACGATACA
CGAATAACACGAGTGACAAAGGAAG

protein sequence of NO24G01520.1

>NO24G01520.1-protein ID=NO24G01520.1-protein|Name=NO24G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=700bp
MLGPFLFAWARIGPTAASAAALRRLPKPRTFAAASFSTTPPAIPTTSPTA
TFPAEEQLVNVEINGRSIAVPAYATILEAARAAGAFVPTLCAHPSIPARA
TCRICLVELETGQGTKKVVGPASPTDARRVEKLVPMSKLVPACITQVKEG
QRIHTHSPDVLENVRFILQLMRAKHPNTCQTCDADGNCTFQDLLYRYQVE
DIAPTEIRKNFEHHHEWDGGASIGTPTDSQTPAPSKDTPYGAITFDPDKC
VKCGRCVAVCQKIQGVGAIGFVGRGADMHLSTMQGLPFDQTKCIECGQCV
AVCPTGAMRERHDLFHVIDALQNKEVVKVAAVAPSVRVAISEEFDLPPGR
ISMGQIVVGLKQLGFDYVFDTNFAADLTIMEEGTEFLSRLKKEPGAGPLP
MFTSCCPGWINLVEKNYPYLIPHLSSCKSPQGMMGAAVKNVWAPRVGRDP
ADVVNVSIMPCTAKKGEAHRPADRAATYSAKLDTTVPNNDYVLTTREIGR
LFRLHKISLPALESQAPDDPLGESTGAAVLFGATGGVMEAALRTAYELAS
GGQPLPKIEMSDIRGLQGVKSARVCIPNPDGKGPGAVVRVGVVHGTAETR
ALLERMKSGDESAQFDFVEVMACRGGCIGGGGQSKSDDPFVLQKRIAHVY
NLDVESAIRKSHENPSIKKLYQEALGEPGGHLSHQLLHTQYTDRSQDTK*

mRNA from alignment at chr24:404594..408922-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO24G01520.1 ID=NO24G01520.1|Name=NO24G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=4329bp|location=Sequence derived from alignment at chr24:404594..408922- (Nannochloropsis oceanica)
CAACAGCAGCAGCAGCAGCAGCAGTAGCACGGGCTTTTTTCAAGTCCATC
CGGTAGGCCAAGGTGGGTATAAAATGATGCAGACAGTAAGCTTGCAGCAA
AGATGGAGGACGCAAGAGCCGTGTTTGGGGTGTTTCGGCGTCCATGGGAA
TGTTCATCAAAACGAGCTTGTTCCCCTGGTGGTACTGAAGGGGAAGAAGA
GGACAGTCTTCATCCCCTGTCGCTGCTGCTGCTGCTGCTGTTACTGTTGA
GGAGAAGGTAGATTGATGGAGGGTATGGGCGAGGTGGAGAGCGAGGGCTT
TGCCGGCATTGGGGGAGGTGAAGTCCGCAGTAAAGGAAGGGAGGAGGAGG
TTGGGAGGAGGGTGCTCTGTGCTGATGCTGGTGCCGCACTTAAAACCATT
GCTGCTGCAGCTGCTGTTGTTGTTGATCTTGCTATTGTTGCTGCTGCTCG
GATGCATCACGCCTCCTCCTTGTCCTCCTCCTCTGGTTTCTTCTGTCACT
GCCTTCCGAATTTCCCCCTCAATTGACGCACACAACTCCTCCACCAACCT
CCACTCCCCCCCCCTTCCCTCCCATCGCCAATTCGCCGCATAAATTTCTC
TCGTTCGTCATTCTTAATATTGAAGATGAGCATGGAGGGACGGCGTCGCT
TGGCCATGCTTCGAACAAGGGAAATGAGAAGAGGGAGGGAGGCAGAGGAG
GCTGTACAAGCAACCGGCACCACTGGCGTTCTCCCTGCAGCTGCTTTTCC
TGCTGTCCCTGCCACATATAGTGATCGTGCTGATCCGACTGCTACTGCTC
CTGCTACTGCTGTTGCTGATGGCGGTGATACGGGCTTCTCCTCCTCCACA
GCCGTTTCTGCCACCCTTCTTCTTCCTGCACGTCCTTCCTCTTCATCCAT
CCCTTGAGTCGCCACCTTTGCTTTGTTAAAGGGCTCTATCACCACGAGTG
CCGCGTCCACTTCCCGCATTGCCTCCCATGTCTTATTCCTCTTCTTATCT
CCCAGTCGTCCCGTGTCATCCACACCTGCTGTATCTAGTAGTTTGATCGG
CCCCAAACCATGTATTTCCATGATGGCTGTCTTGATATCTGATGTTGTCC
CAGGCGTGGCATCAACGATACTTGTAGCTTGTTGCGTCAAGGCATTGAGA
ACTGTGGACTTGCCGGCATTCATCTCTCCGACTAAGCCGAGGAGGAGACG
GTGTAGACCAGAAGAATAGGAGGAGGAAGTGGTGCTGAAGGAGGAGGACG
AGGAGGAGGAATTGGTGCTGCAGGAGCACAAAGACGCACAAGGCGATGCG
AAGAAGGGCGACAAGGACGAGGCTCTGTCGAGGGAGGTGTCGTATATAGG
CCGTGATGGCCTGAGCAATTTGGACGTGTACGGCCCTGGCAGCTTGATGA
GGCCAAGGACCATGCGAATGCCGCTCTTCTTCAACAGAAAGCCTTCCACC
TATCCCAAACTTACCTGGGTAGTGATCGCCCATGTCTCATCCCTTCCCGG
TACCAACCCCAAGAAGACGACCCTATAAAGAAACTGCGTGGCGGCATGGC
CTGTAGCGTGTGGAGTGGGTGGCGTGATCTTATGGCCAAGATAGGCATGA
TCCAAGTTTAAAGCCCAGCCCATGACTCGGAAGTTGAACCGATGTATCGC
TCTGTTTTTCTCTGCTACTGAGACGCTCATTGACCTTCCCGCGTGCCCGC
ACGCCCAAATCCCGCAATCGCACAGGCTCCACCGACCATGCTTGGCCCCT
TCTTATTCGCATGGGCTCGGATTGGGCCGACGGCTGCCTCCGCTGCTGCA
TTGCGCCGCCTTCCCAAGCCCCGTACCTTTGCTGCTGCTTCCTTCTCGAC
TACACCCCCTGCCATCCCCACCACCTCACCCACCGCCACATTTCCTGCAG
AAGAGCAGCTGGTAAATGTAGAAATCAATGGCCGGAGCATTGCCGTGCCC
GCCTATGCCACCATTCTCGAGGCTGCGCGGGCTGCAGGGGCGTTTGTGCC
CACGCTTTGCGCCCACCCTTCCATCCCTGCCCGCGCAACATGCCGTATTT
GCTTGGTGGAGCTCGAGACAGGCCAAGGCACGAAGAAGGTGGTAGGCCCC
GCTTCACCTACGGATGCAAGGAGGGTCGAAAAGCTTGTGCCAATGAGTAA
GCTTGTCCCGGCGTGCATTACCCAAGTAAAGGAGGGACAACGCATCCACA
CACATTCGCCAGATGTCCTGGAGAACGTGCGTTTTATTCTCCAGCTTATG
CGGGCCAAACATCCCAACACTTGTCAAACATGTGATGCCGATGGGAATTG
TACATTTCAGGACTTGCTGTACCGTTATCAGGTATGTGATAAGAGTGAGA
ACGTCTATTGGTTCCTTCCTTGTAGAAGTGTGTGCGTGCTTTCTCTCTTC
CATTAGATCTAGGAGCGCTCAATACATTTCTTTGTCGGACTTGTCATCCT
CTGTCTTGTATTCTTTCGTATAAGTGCGCCTAGTTTCCGAAGCGTACATG
TCGTTCGCCGCACCACTAATAATCCCTCTCCCTCACTTCTCCCCCCTTCG
TTCCTCCCAACAGGTTGAGGACATTGCCCCCACAGAGATTCGCAAGAATT
TTGAACACCACCACGAATGGGACGGTGGGGCTAGCATTGGTACGCCCACT
GACAGCCAAACACCCGCTCCCTCAAAAGACACACCCTATGGCGCCATTAC
TTTTGATCCAGACAAATGTGTCAAGTGCGGGCGGTGTGTGGCAGTCTGCC
AGAAGATTCAAGGGGTCGGAGCGATTGGTTTTGTAGGTCGTGGCGCGGAC
ATGCATTTGTCTACCATGCAGGGCTTGCCATTCGATCAAACCAAATGCAT
CGAGTGCGGTCAGGTAAGGGACTCAAGAGAAGGAAAGGCAGAGAGATGGA
ATGTGGCTGCCCTCGTCATGTGTGAATCCTGCTTTTTTTAAATTACACAT
ATTGAAATCAATTTTTCAAAGTGCAGGTGTGGCTTGGTCGTCCTTGTTGT
GTTCATATCTTGATCGTGCGCATTGACTACCCAAGTTCTGATGATAAGCT
CAATCCAACTATCATCTCTCCTACCCTTACCCCAGTGCGTCGCCGTCTGC
CCCACGGGTGCCATGCGTGAGCGCCACGATCTTTTTCATGTCATTGATGC
TTTGCAAAATAAGGAGGTAGTGAAGGTCGCTGCAGTGGCCCCCTCAGTCC
GCGTGGCGATCAGCGAAGAATTCGATCTTCCTCCTGGCAGGATCTCCATG
GGACAGATCGTCGTCGGTCTGAAGCAGCTAGGATTCGACTATGTGTTCGA
CACGAACTTTGCCGCTGACTTGACCATTATGGAGGAAGGGACTGAATTTC
TTTCCCGTCTCAAGAAAGAGCCGGGCGCAGGACCTCTTCCCATGTTCACT
TCTTGTTGCCCTGGGTGGATCAATTTGGTTGAAAAAAACTACCCTTATCT
AATTCCTCATTTATCGAGCTGCAAATCTCCTCAAGGGATGATGGGGGCAG
CGGTTAAAAATGTGTGGGCGCCTCGCGTAGGACGCGACCCTGCAGATGTA
GTCAATGTTAGCATAATGCCCTGCACTGCGAAGAAGGGAGAAGCGCATCG
CCCTGCCGATCGAGCCGCCACCTACTCCGCTAAGCTCGATACGACGGTGC
CCAACAACGATTACGTCCTAACCACGCGAGAGATCGGACGCCTGTTTCGA
TTGCACAAGATCTCTCTTCCTGCTTTGGAATCACAGGCTCCTGATGATCC
GCTAGGGGAGAGCACAGGGGCTGCGGTATTATTCGGGGCGACGGGAGGGG
TAATGGAAGCGGCGTTGCGAACAGCTTATGAGCTTGCATCGGGAGGGCAG
CCATTGCCAAAAATTGAGATGAGTGATATCAGAGGGCTGCAGGGCGTGAA
GTCCGCGCGGGTGTGTATTCCGAATCCAGATGGGAAGGGACCGGGGGCTG
TGGTTCGTGTGGGGGTCGTGCATGGGACGGCAGAAACGCGGGCATTGCTG
GAGAGGATGAAGTCCGGGGATGAATCGGCACAGTTTGACTTCGTTGAGGT
GATGGCTTGTAGGGGAGGATGCATAGGGGGAGGCGGGCAAAGCAAGAGCG
ACGATCCGTTTGTGCTTCAGAAGAGGATTGCACATGTGTATAATTTAGAT
GTGGAGAGCGCGATAAGGAAAAGTCACGAGAACCCGAGCATCAAGAAATT
ATATCAAGAGGCGTTAGGTGAACCAGGGGGACACTTGAGCCATCAGCTGT
TACATACTCAATACACAGATCGGTCGCAAGACACTAAATAAATAGAACGA
TACACGAATAACACGAGTGACAAAGGAAG

Coding sequence (CDS) from alignment at chr24:404594..408922-

>NO24G01520.1 ID=NO24G01520.1|Name=NO24G01520.1|organism=Nannochloropsis oceanica|type=CDS|length=2100bp|location=Sequence derived from alignment at chr24:404594..408922- (Nannochloropsis oceanica)
ATGCTTGGCCCCTTCTTATTCGCATGGGCTCGGATTGGGCCGACGGCTGC
CTCCGCTGCTGCATTGCGCCGCCTTCCCAAGCCCCGTACCTTTGCTGCTG
CTTCCTTCTCGACTACACCCCCTGCCATCCCCACCACCTCACCCACCGCC
ACATTTCCTGCAGAAGAGCAGCTGGTAAATGTAGAAATCAATGGCCGGAG
CATTGCCGTGCCCGCCTATGCCACCATTCTCGAGGCTGCGCGGGCTGCAG
GGGCGTTTGTGCCCACGCTTTGCGCCCACCCTTCCATCCCTGCCCGCGCA
ACATGCCGTATTTGCTTGGTGGAGCTCGAGACAGGCCAAGGCACGAAGAA
GGTGGTAGGCCCCGCTTCACCTACGGATGCAAGGAGGGTCGAAAAGCTTG
TGCCAATGAGTAAGCTTGTCCCGGCGTGCATTACCCAAGTAAAGGAGGGA
CAACGCATCCACACACATTCGCCAGATGTCCTGGAGAACGTGCGTTTTAT
TCTCCAGCTTATGCGGGCCAAACATCCCAACACTTGTCAAACATGTGATG
CCGATGGGAATTGTACATTTCAGGACTTGCTGTACCGTTATCAGGTTGAG
GACATTGCCCCCACAGAGATTCGCAAGAATTTTGAACACCACCACGAATG
GGACGGTGGGGCTAGCATTGGTACGCCCACTGACAGCCAAACACCCGCTC
CCTCAAAAGACACACCCTATGGCGCCATTACTTTTGATCCAGACAAATGT
GTCAAGTGCGGGCGGTGTGTGGCAGTCTGCCAGAAGATTCAAGGGGTCGG
AGCGATTGGTTTTGTAGGTCGTGGCGCGGACATGCATTTGTCTACCATGC
AGGGCTTGCCATTCGATCAAACCAAATGCATCGAGTGCGGTCAGTGCGTC
GCCGTCTGCCCCACGGGTGCCATGCGTGAGCGCCACGATCTTTTTCATGT
CATTGATGCTTTGCAAAATAAGGAGGTAGTGAAGGTCGCTGCAGTGGCCC
CCTCAGTCCGCGTGGCGATCAGCGAAGAATTCGATCTTCCTCCTGGCAGG
ATCTCCATGGGACAGATCGTCGTCGGTCTGAAGCAGCTAGGATTCGACTA
TGTGTTCGACACGAACTTTGCCGCTGACTTGACCATTATGGAGGAAGGGA
CTGAATTTCTTTCCCGTCTCAAGAAAGAGCCGGGCGCAGGACCTCTTCCC
ATGTTCACTTCTTGTTGCCCTGGGTGGATCAATTTGGTTGAAAAAAACTA
CCCTTATCTAATTCCTCATTTATCGAGCTGCAAATCTCCTCAAGGGATGA
TGGGGGCAGCGGTTAAAAATGTGTGGGCGCCTCGCGTAGGACGCGACCCT
GCAGATGTAGTCAATGTTAGCATAATGCCCTGCACTGCGAAGAAGGGAGA
AGCGCATCGCCCTGCCGATCGAGCCGCCACCTACTCCGCTAAGCTCGATA
CGACGGTGCCCAACAACGATTACGTCCTAACCACGCGAGAGATCGGACGC
CTGTTTCGATTGCACAAGATCTCTCTTCCTGCTTTGGAATCACAGGCTCC
TGATGATCCGCTAGGGGAGAGCACAGGGGCTGCGGTATTATTCGGGGCGA
CGGGAGGGGTAATGGAAGCGGCGTTGCGAACAGCTTATGAGCTTGCATCG
GGAGGGCAGCCATTGCCAAAAATTGAGATGAGTGATATCAGAGGGCTGCA
GGGCGTGAAGTCCGCGCGGGTGTGTATTCCGAATCCAGATGGGAAGGGAC
CGGGGGCTGTGGTTCGTGTGGGGGTCGTGCATGGGACGGCAGAAACGCGG
GCATTGCTGGAGAGGATGAAGTCCGGGGATGAATCGGCACAGTTTGACTT
CGTTGAGGTGATGGCTTGTAGGGGAGGATGCATAGGGGGAGGCGGGCAAA
GCAAGAGCGACGATCCGTTTGTGCTTCAGAAGAGGATTGCACATGTGTAT
AATTTAGATGTGGAGAGCGCGATAAGGAAAAGTCACGAGAACCCGAGCAT
CAAGAAATTATATCAAGAGGCGTTAGGTGAACCAGGGGGACACTTGAGCC
ATCAGCTGTTACATACTCAATACACAGATCGGTCGCAAGACACTAAATAA

Synonyms

Publications