NO24G01160.1, NO24G01160.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G01160.1
Unique NameNO24G01160.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length585
Alignment locationchr24:321459..322793 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:321459..322793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01160.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01160NO24G01160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G01160.1NO24G01160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G01160.1.cds1NO24G01160.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01160.1.cds2NO24G01160.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01160.1.cds3NO24G01160.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01160.1.cds4NO24G01160.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01160.1.cds5NO24G01160.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G01160.1 ID=NO24G01160.1|Name=NO24G01160.1|organism=Nannochloropsis oceanica|type=mRNA|length=585bp
ATGATAGCCCTGTGCCTGTATTTGTGGATAGAGGGGATCAGGTGCCTGGG
GCCACTCAGGGCCGTCCTTGTCGACTTCGCAGACCTGTCCTTTCTGAGGC
ATTTAGTGCGTAGAGGTGAGGGGGAGGGAAGATCGAGAAGCCCCCTGAGC
GCCCGTTGGGAAAGCATCCTCTTCTCCCTGGCCGCCCTCCTCCTCCTTCT
CGTCTTCCCTCTCTCCCTCCCCTCTCCCCCCTCCTCCCTCCCTTCCTCTT
CCTTGGGGCTTCTGGCCGTCCTGCTGGCCGCTGGGACCACCTACGAGAGG
CAGCGATTGACGGAGGATCTAGCCGCCGAGCTTGGAGGACTTCATCGCCT
CCTTTCTCTCTCCCTCCTCCTGACAAGCGCCCTCCTCCTCCTCCCTTCCC
TCGCCCTGGACTGGTGCTGGAGGAAGGGAGGGAAGGAGGGAGGGCGGGAG
GGTGATGTGTCCTGGGCATGGGCGATAGGGAGGACTGTGGGCGCGGCAGC
GATGGGGCCGGTGCTACAGTTGTATCTCGAGACCGTCTCCTCCAACGAAT
GGGTGCTGCCGCCCCCCCTCCTTCGTCTTTCATGA
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protein sequence of NO24G01160.1

>NO24G01160.1-protein ID=NO24G01160.1-protein|Name=NO24G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bp
MIALCLYLWIEGIRCLGPLRAVLVDFADLSFLRHLVRRGEGEGRSRSPLS
ARWESILFSLAALLLLLVFPLSLPSPPSSLPSSSLGLLAVLLAAGTTYER
QRLTEDLAAELGGLHRLLSLSLLLTSALLLLPSLALDWCWRKGGKEGGRE
GDVSWAWAIGRTVGAAAMGPVLQLYLETVSSNEWVLPPPLLRLS*
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mRNA from alignment at chr24:321459..322793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G01160.1 ID=NO24G01160.1|Name=NO24G01160.1|organism=Nannochloropsis oceanica|type=mRNA|length=1335bp|location=Sequence derived from alignment at chr24:321459..322793- (Nannochloropsis oceanica)
ATGATAGCCCTGTGCCTGTATTTGTGGATAGAGGGGATCAGGTGCCTGGG
GCCACTCAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCATGGGAGGT
GGTACGAACACCCAACTGTGCGGATCCAGCTATCTATCCCTCTCTATCCC
TCCCTTCCTCCCTTACTGTACGCTTCGACATATTTTTCATCATCTACCCT
CCTTTCCTCCCTCCTCCCTCCCTCCCTCACTCCCTCCCGTCCTCTCTACC
TCACAGGGCCGTCCTTGTCGACTTCGCAGACCTGTCCTTTCTGAGGCATT
TAGTGCGTAGAGGTGAGGGGGAGGGAAGATCGAGGTTTGGAGGGGCAGAG
GGTGCGATACGGGAGGGAAGGAAGGTGAAAGGGGGTAAGGGATGGAGGCT
CGCGAAATTGTGAAAGAAGCTCATGGTAACTCATGCTCTTCCTTTCATCT
CTCCCTCCCTTCCCCCTCCCTCCCTCCTTCCCTCCCTCCCCCTTCCCCTC
ATCCATTCCTCACCAGAAGCCCCCTGAGCGCCCGTTGGGAAAGCATCCTC
TTCTCCCTGGCCGCCCTCCTCCTCCTTCTCGTCTTCCCTCTCTCCCTCCC
CTCTCCCCCCTCCTCCCTCCCTTCCTCTTCCTTGGGGCTTCTGGCCGTCC
TGCTGGCCGCTGGGACCACCTACGAGAGGCAGCGATTGACGGAGGTAGGG
GGGCAGAGAGGTCAGAGTAACTGCCAAGTGAGGGCGTGAGGGAGGGAAGG
AAAGAGGGAAGGAGGTGCGGTCGACCCGCATTAGCCCCCTCCTGCTGTGA
AAGCCTAACCAACCACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CAGGATCTAGCCGCCGAGCTTGGAGGACTTCATCGCCTCCTTTCTCTCTC
CCTCCTCCTGACAAGCGCCCTCCTCCTCCTCCCTTCCCTCGCCCTGGACT
GGTGCTGGAGGAAGGGAGGGAAGGAGGGAGGGCGGGAGGGTGATGTGTCC
TGGGCATGGGCGATAGGGAGGACTGTGGGCGCGGCAGCGATGGGGCCGGT
GCTACAGGTAGGTTGAAGGCAGCCCCTCCCTCTCTGCCACAATCTCTCTC
TCGATCCCTCCATCCCATGCTCGCCTATAAGAGAGATTCCTCCGTCCCTC
CCTCCGTCCCTCTCGTCCTCCCACCCTCCCTCCCTCTACGCCTTCAGCTC
TCACTTTCCAGCAAATTAGTCAGATACATATAGCCCTCCCTCCCTCCTTC
CCTCCCTCTCTCCCTCCAGTTGTATCTCGAGACCGTCTCCTCCAACGAAT
GGGTGCTGCCGCCCCCCCTCCTTCGTCTTTCATGA
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Coding sequence (CDS) from alignment at chr24:321459..322793-

>NO24G01160.1 ID=NO24G01160.1|Name=NO24G01160.1|organism=Nannochloropsis oceanica|type=CDS|length=585bp|location=Sequence derived from alignment at chr24:321459..322793- (Nannochloropsis oceanica)
ATGATAGCCCTGTGCCTGTATTTGTGGATAGAGGGGATCAGGTGCCTGGG
GCCACTCAGGGCCGTCCTTGTCGACTTCGCAGACCTGTCCTTTCTGAGGC
ATTTAGTGCGTAGAGGTGAGGGGGAGGGAAGATCGAGAAGCCCCCTGAGC
GCCCGTTGGGAAAGCATCCTCTTCTCCCTGGCCGCCCTCCTCCTCCTTCT
CGTCTTCCCTCTCTCCCTCCCCTCTCCCCCCTCCTCCCTCCCTTCCTCTT
CCTTGGGGCTTCTGGCCGTCCTGCTGGCCGCTGGGACCACCTACGAGAGG
CAGCGATTGACGGAGGATCTAGCCGCCGAGCTTGGAGGACTTCATCGCCT
CCTTTCTCTCTCCCTCCTCCTGACAAGCGCCCTCCTCCTCCTCCCTTCCC
TCGCCCTGGACTGGTGCTGGAGGAAGGGAGGGAAGGAGGGAGGGCGGGAG
GGTGATGTGTCCTGGGCATGGGCGATAGGGAGGACTGTGGGCGCGGCAGC
GATGGGGCCGGTGCTACAGTTGTATCTCGAGACCGTCTCCTCCAACGAAT
GGGTGCTGCCGCCCCCCCTCCTTCGTCTTTCATGA
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Synonyms
Publications