NO24G01070.1, NO24G01070.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G01070.1
Unique NameNO24G01070.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length699
Alignment locationchr24:295198..296262 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:295198..296262 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G01070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01070NO24G01070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G01070.1NO24G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G01070.1.cds1NO24G01070.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01070.1.cds2NO24G01070.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01070.1.cds3NO24G01070.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G01070.1.cds4NO24G01070.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G01070.1 ID=NO24G01070.1|Name=NO24G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=699bp
ATGACAGAGGAAGCCTCACAAGCCTTTGTTCAAGGCTCGAACTTGACGCC
TGAGGAGCGCGGTCGACTAGAGCACATCCAGGCGTTCCGGCAGCTCCACC
ACGAGGCCTTGTCAGGGGAGGATCGACGACGGCGGCGGCGCAGAAGGTCA
GGAGAAGAGGGCGAAGGAAGAGGAGAGTATTTAAGTGAAATGCCAGCACA
AGACAAGGTCCACGCTCCCTTCCCCCTCCGTGATAGCTGGACCCCTCGGC
CCGCCCGCCCTGTTGAGAGTCTGCGACCGTGGGATGATGAAGATTGTCTC
CGATTTCGGCTTGAGAATTACACACTGGATGCGGTGGGAAAGCTTGTGAG
AATTGACTACACGGACAAGCTTGCGGCTACTGACGTTCCTCCACCCCTCG
TTTCCAAGGCTCTCTTCCAGGAGGAGGTCTCTGCTCGGCGCTTGGTCGTT
CCTCGACACTCCTTCCAGTCCATGCGCGTCTCGGACGGAGGCAGAAAGGG
AGGGCAAGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGGAAGCGGTGG
AAATGGACACTTTTTCCTTGGAAGCCCTCGCAAAGTGGGAACGGCGAAGA
GAAGAGCTCGCGTCCCTCCCTACGGTAGAGCTGGGAGGGAGGGAGCGGAG
GCGACCGGCGGTGCGAGCCGACAGTGTGAGTATTTATGCCTACATGTGA
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protein sequence of NO24G01070.1

>NO24G01070.1-protein ID=NO24G01070.1-protein|Name=NO24G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MTEEASQAFVQGSNLTPEERGRLEHIQAFRQLHHEALSGEDRRRRRRRRS
GEEGEGRGEYLSEMPAQDKVHAPFPLRDSWTPRPARPVESLRPWDDEDCL
RFRLENYTLDAVGKLVRIDYTDKLAATDVPPPLVSKALFQEEVSARRLVV
PRHSFQSMRVSDGGRKGGQEGGREEGREGGEAVEMDTFSLEALAKWERRR
EELASLPTVELGGRERRRPAVRADSVSIYAYM*
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mRNA from alignment at chr24:295198..296262+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G01070.1 ID=NO24G01070.1|Name=NO24G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=1065bp|location=Sequence derived from alignment at chr24:295198..296262+ (Nannochloropsis oceanica)
ATGACAGAGGAAGCCTCACAAGCCTTTGTTCAAGGCTCGAACTTGACGCC
TGAGGAGCGCGGTCGACTAGAGCACATCCAGGCGTTCCGGCAGCTCCACC
ACGAGGCCTTGTCAGGGGAGGATCGACGACGGCGGCGGCGCAGAAGGTCA
GGAGAAGAGGGCGAAGGAAGAGGAGAGTATTTAAGTGAAATGCCAGCACA
AGACAAGGTAGGTATTCTAGTATGTGCCTGCTCGGGCTTGTGGTGTAGTT
GTCTTACCCTTGCCTCCCTCCCTCCCTCTCTCCCTCTTTCAGGTCCACGC
TCCCTTCCCCCTCCGTGATAGCTGGACCCCTCGGCCCGCCCGCCCTGTTG
AGAGTCTGCGACCGTGGGATGATGAAGATTGTCTCCGATTTCGGCTTGAG
AATTACACACTGGATGCGGTGGGAAAGCTTGTGAGGTGAGGGATGGGAGG
GAAGGAGGGAATGGGGAAGGAAGGAAAGGGAGGGGGAAACGTATAGGGGA
AGATCTAAAGAAAGGCAAAACGAGCGATTGCGTATGTCATTATAATGCTC
ATTTCTTCTTGTGCATTCGTGTGTTAGAATTGACTACACGGACAAGCTTG
CGGCTACTGACGTTCCTCCACCCCTCGTTTCCAAGGCTCTCTTCCAGGTA
TGTCCCACTCCGTACTTTCTCCCTCCCTACCTCCCTTCTTCTCCTTCCCA
ATGTTGTCTAGTCACCTACAGCGAATGCTTACCACCCTTTGTTTTCTTCC
CTCTTTTCCCTCCCTCTCGGTCCTCCCCCTCCTCAGGAGGAGGTCTCTGC
TCGGCGCTTGGTCGTTCCTCGACACTCCTTCCAGTCCATGCGCGTCTCGG
ACGGAGGCAGAAAGGGAGGGCAAGAGGGAGGGAGGGAGGAAGGGAGGGAG
GGAGGGGAAGCGGTGGAAATGGACACTTTTTCCTTGGAAGCCCTCGCAAA
GTGGGAACGGCGAAGAGAAGAGCTCGCGTCCCTCCCTACGGTAGAGCTGG
GAGGGAGGGAGCGGAGGCGACCGGCGGTGCGAGCCGACAGTGTGAGTATT
TATGCCTACATGTGA
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Coding sequence (CDS) from alignment at chr24:295198..296262+

>NO24G01070.1 ID=NO24G01070.1|Name=NO24G01070.1|organism=Nannochloropsis oceanica|type=CDS|length=699bp|location=Sequence derived from alignment at chr24:295198..296262+ (Nannochloropsis oceanica)
ATGACAGAGGAAGCCTCACAAGCCTTTGTTCAAGGCTCGAACTTGACGCC
TGAGGAGCGCGGTCGACTAGAGCACATCCAGGCGTTCCGGCAGCTCCACC
ACGAGGCCTTGTCAGGGGAGGATCGACGACGGCGGCGGCGCAGAAGGTCA
GGAGAAGAGGGCGAAGGAAGAGGAGAGTATTTAAGTGAAATGCCAGCACA
AGACAAGGTCCACGCTCCCTTCCCCCTCCGTGATAGCTGGACCCCTCGGC
CCGCCCGCCCTGTTGAGAGTCTGCGACCGTGGGATGATGAAGATTGTCTC
CGATTTCGGCTTGAGAATTACACACTGGATGCGGTGGGAAAGCTTGTGAG
AATTGACTACACGGACAAGCTTGCGGCTACTGACGTTCCTCCACCCCTCG
TTTCCAAGGCTCTCTTCCAGGAGGAGGTCTCTGCTCGGCGCTTGGTCGTT
CCTCGACACTCCTTCCAGTCCATGCGCGTCTCGGACGGAGGCAGAAAGGG
AGGGCAAGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGGAAGCGGTGG
AAATGGACACTTTTTCCTTGGAAGCCCTCGCAAAGTGGGAACGGCGAAGA
GAAGAGCTCGCGTCCCTCCCTACGGTAGAGCTGGGAGGGAGGGAGCGGAG
GCGACCGGCGGTGCGAGCCGACAGTGTGAGTATTTATGCCTACATGTGA
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Synonyms
Publications