NO24G00960.1, NO24G00960.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G00960.1
Unique Name	NO24G00960.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2708
Alignment location	chr24:259452..264717 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:259452..264717 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO24G00960.1 vs.
Match: XP_005854208.1 (long-chain acyl-CoA ligase [Nannochloropsis gaditana CCMP526]; EKU22147.1 long-chain acyl-CoA ligase [Nannochloropsis gaditana CCMP526]; EWM21593.1 amp-dependent synthetase and ligase [Nannochloropsis gaditana])

HSP 1 Score: 599.0 bits (1543), Expect = 1.900e-167
Identity = 301/634 (47.48%), Postives = 423/634 (66.72%), Query Frame = 0

Query:   79 YDTLVEMQEKACKRYASQLFLGARPPAGGPFQFMTFKEFDEQVSRARVLLQEAGIGKGDKVAAISANRVEWAVCAYATFSVGAVWVPMYEQQRLKECEYILKDSGAKLLLVSKERIYDKSRHFVDE-----------------------LPTLQDVWCFDMDFHPRMKVV------DPAHFIPSVAVEPDDTSTLIYTSGTTGTPKGVQLSHRNLTADVKGMSVVIPDDAIPVARSVAFLPWAHCFGKTCELHNALQRGAQVAVVEDLAALPAALLEVKPTMLYSVPTLFKRVYDKIQDKIKNEKPFTKALIGRALAVAEKRRLLLQEGGSPGPLLSLQFQALDKIVLSKFKAPLGGELNSSYVGGSAMPVEVANFFE-NIGVAICEGYGLTETSPLICVNPFNTRVRRTGTVGQLIGDADVRIVKDSHEVDPGEEGEVWVAGPFVFSGYHNKPAETAEAFAELHGTRYFKTGDLGRFVKGGLGVPLLKITGRVKELYKLENGKYVVPALIEKAMAEAEIVSQALVFGSDRPYNVAILVPNWEKLQAYGVEHTGGEVTGLSTPEEIGAHPKIQAYIEEQLTTCCKDKVKKYEMPTRVLLIKDAFSVENEMLTQKLSIKRHLVVDKYAQEIAALY 683
            + TLVEMQ+   +    + FLG +P     ++++T++ F++ V +A+ +L+EAGIG GDKVAA+S NRVEWAV   A+ S+GA WVPMYEQQRL ECEYIL+DSGAKLLLV     YDK+RHF+                         + +L+D+W FD+D   RM  V      +      S  V PDD + LIYTSGTTGTPKGV+L+HRNL  +++GM  V+  + +P A S+AFLPWAH  G  CEL N + RGA+VA+ +D+  + + + EV+P +L++VPTL+K+VYD+IQDKI ++  +++ L+ +A+AVAEKR  +L+EG      L  Q++ LD IVLSK +  LGG +  S VGGS M + V  FFE  +G+AI EGYGL+ETSPL+ ++  + ++RR G+VGQ +  A++ +V+D   V  GEEGE+W +GP VF GY  K  ETA AF E+ G ++F+TGDLG   +G      L ITGR+KELYKLENGKYV   ++EKA+ E+E + Q +++G+D P+N A++VPNWEKL A+ V      ++  S   EI  HP++QA++ E +   CKDK+KKYEMP + LL+++ F+VENEMLT K+SIKRH V+  Y   + A+Y
Sbjct:   50 FTTLVEMQQSVARTQGKKDFLGYKPCPSSKYKWITYQAFNDMVGKAKFVLREAGIGPGDKVAALSGNRVEWAVGCMASLSLGATWVPMYEQQRLTECEYILRDSGAKLLLVGSREAYDKTRHFLTRPSRNPAFAQGDALSVINMQESKTVSSLKDIWTFDVDVPARMARVTGVMTAEADACFASAVVRPDDVAVLIYTSGTTGTPKGVELTHRNLCTNIEGMWEVVRPEDMPNALSLAFLPWAHSIGMNCELFNMMSRGARVALAQDMTTIASDIKEVRPNILFAVPTLYKKVYDRIQDKITSQGKWSRWLVDKAVAVAEKRLEILREGKRLSLGLQAQYEVLDHIVLSKLRDTLGGRVRISPVGGSKMSLPVTRFFEAALGIAILEGYGLSETSPLLSISRPDIQIRRLGSVGQAVKGAELAVVRDGLRVPEGEEGEIWASGPMVFKGYLKKKEETAAAFGEMDGKKWFRTGDLGTLEQG-----FLTITGRLKELYKLENGKYVCAPVVEKALLESEYIFQVVLYGADLPFNTALIVPNWEKLTAWCVSKKLPGLSASSRKTEIRTHPEVQAFMRENIVLACKDKMKKYEMPQKWLLLEEPFTVENEMLTPKMSIKRHAVIKAYGSALNAIY 678

The following BLAST results are available for this feature:

BLAST of NO24G00960.1 vs.

BLAST of NO24G00960.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854208.1	1.900e-167	47.48	long-chain acyl-CoA ligase [Nannochloropsis gadita...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G00960	NO24G00960	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO24G00960.1	NO24G00960.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO24G00960.1.cds1	NO24G00960.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds2	NO24G00960.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds3	NO24G00960.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds4	NO24G00960.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds5	NO24G00960.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds6	NO24G00960.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds7	NO24G00960.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds8	NO24G00960.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds9	NO24G00960.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds10	NO24G00960.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds11	NO24G00960.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds12	NO24G00960.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds13	NO24G00960.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds14	NO24G00960.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds15	NO24G00960.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds16	NO24G00960.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00960.1.cds17	NO24G00960.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr24:259452..264717+
coding sequence from alignment at chr24:259452..264717+

mRNA sequence

>NO24G00960.1 ID=NO24G00960.1|Name=NO24G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=2708bp
TCGCTGAAGAAAGAAGCAGACCCGGAAGGCGCCCTCCTCTTTACATATAC
CACATAAGTGTCTCGTCCATGTTACGGGCCCTCACGATGTGCAGCGGAGT
CAGTTGCTTGTGTGGTCTAGGTGCGGAGGAGATCGCGAGCACTGTGCTTT
AGTCTGTGCGACGGACTATTTTTTAGCTGCTGTTTTTCTTTTCGCTTCTT
CAAGCTCAACTCACTGCTCTCTTGGTCTCTAGCACCCTCGCTCTGTACGT
ACAACTACACCACTTGCAATACATACATCTCACATGCGACAGCCGTTGCC
TCGACAAAAGCAGCAAAGGCTAGTTAGGTAAAACCAGGACGTGGTAGCGG
AGCTCCACTTGCCAAATCAAGCCCTCTGGCTCGTATTGCTTCGTGAGCAT
TCTAGCCAATGCTGCTGCACCGCTCCTCTTCGTCCCTACTGGCGGCCGGC
CGGACGGGAGTCATGGCCTCCCGGCGCATGGTCGTGGAGAAAGGACGACG
CAGGGCTGTCGAGCTGTGCCTCGCGCAGACGCAGTCTCTAGCGCGGCGCA
AGACTATAGCTCTGCCCTTTCCCTGGTCCTTGATGTATCCATTCGTGGCC
CCAGTGTCCAGGGCCTTCTCAGTGGGCTTTGGTGGCTTGCAGTATGACAC
GCTAGTGGAGATGCAAGAAAAGGCTTGCAAACGCTACGCCTCTCAGCTTT
TCTTGGGCGCCCGTCCACCCGCCGGCGGTCCCTTCCAATTTATGACATTT
AAAGAATTTGATGAACAAGTGAGCCGGGCCCGCGTCTTGCTTCAGGAGGC
TGGGATAGGGAAGGGGGACAAGGTGGCGGCCATCAGCGCGAACCGGGTCG
AGTGGGCCGTGTGCGCCTACGCCACTTTTTCCGTGGGGGCGGTCTGGGTG
CCCATGTACGAGCAGCAGCGCCTCAAGGAGTGCGAGTACATCCTCAAGGA
CTCAGGTGCCAAGCTGCTGCTGGTGTCGAAGGAGCGTATCTACGACAAGA
GCCGGCACTTCGTGGACGAGCTGCCCACCCTCCAGGACGTGTGGTGCTTC
GACATGGACTTCCACCCGCGCATGAAGGTGGTGGACCCAGCCCACTTCAT
CCCCTCTGTGGCCGTGGAGCCCGATGATACGTCCACCCTTATCTACACGA
GCGGCACCACGGGCACGCCTAAGGGTGTACAGCTCTCCCACCGCAACCTT
ACGGCCGATGTCAAGGGCATGTCCGTCGTGATCCCTGACGACGCCATCCC
TGTCGCCCGCTCCGTGGCCTTCCTGCCCTGGGCCCACTGCTTCGGCAAGA
CGTGCGAGCTGCACAACGCCTTGCAGCGCGGGGCACAGGTGGCGGTGGTG
GAGGACCTGGCCGCCCTCCCCGCGGCCCTGCTGGAGGTGAAGCCCACCAT
GCTCTATTCGGTCCCCACCCTCTTCAAGCGCGTCTACGACAAGATCCAGG
ACAAGATCAAGAACGAGAAGCCCTTCACCAAGGCCCTCATCGGCCGCGCT
CTGGCTGTGGCGGAGAAACGCCGGCTGCTCCTGCAAGAGGGGGGGAGCCC
CGGCCCCCTTCTGTCGCTGCAGTTCCAGGCGCTCGATAAGATTGTCCTGT
CCAAGTTCAAGGCCCCCCTGGGCGGGGAGCTCAACTCGTCCTACGTCGGG
GGCTCGGCCATGCCTGTGGAGGTGGCCAACTTCTTCGAGAACATCGGGGT
GGCCATTTGCGAGGGGTACGGCCTGACCGAGACCTCGCCCCTCATCTGCG
TCAATCCTTTCAACACCCGCGTCCGACGCACGGGCACGGTGGGGCAGCTG
ATCGGAGACGCCGACGTGCGGATCGTCAAGGACAGCCACGAGGTGGATCC
CGGGGAAGAGGGCGAGGTCTGGGTGGCCGGGCCGTTCGTCTTCTCGGGCT
ACCACAATAAGCCCGCGGAGACAGCCGAGGCCTTCGCCGAGCTGCATGGG
ACCAGGTACTTTAAGACAGGTGACTTGGGCCGGTTCGTTAAGGGCGGGCT
GGGCGTGCCCCTCCTCAAGATCACTGGCCGCGTCAAGGAGCTGTACAAGC
TCGAGAACGGCAAGTACGTGGTGCCGGCCCTGATTGAAAAGGCCATGGCC
GAGGCCGAGATTGTCTCGCAGGCCCTGGTCTTCGGGTCCGACCGCCCCTA
CAACGTGGCCATCCTGGTGCCCAACTGGGAGAAGCTGCAGGCGTACGGCG
TGGAGCACACGGGCGGCGAGGTCACCGGCTTGAGCACCCCAGAAGAGATC
GGCGCCCACCCCAAGATCCAGGCCTACATCGAGGAGCAGCTGACGACGTG
CTGCAAGGACAAGGTCAAGAAGTACGAGATGCCCACGCGCGTCCTCCTTA
TCAAGGATGCCTTCTCCGTTGAGAACGAGATGCTGACCCAAAAGCTGTCC
ATCAAGCGGCACCTGGTCGTGGACAAGTACGCGCAGGAGATCGCCGCGCT
CTACGCCGGGGACAGGACGGTCATGGTGGCGTAGGCGGGGAGGGCGAAGG
AGAGGGGGGGGGCTTGTAAACTTTTCTGATGTTTTTTGGGGATGTGAGAG
GAGGCAGGGGATGGGAGGAAGGGGAGGCAAAGGAAAGGAGGGAGGACGCT
AGAGTGGGGCGGAAGGGGAAATGAATAGTGAGGTAGTTTGGAGAGAGGAG
AGTCAAAGGACGAAGGGCGCATAAAAAAGCAAAGCAACTATTGAAACAAA
GACCCACA

protein sequence of NO24G00960.1

>NO24G00960.1-protein ID=NO24G00960.1-protein|Name=NO24G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=692bp
MLLHRSSSSLLAAGRTGVMASRRMVVEKGRRRAVELCLAQTQSLARRKTI
ALPFPWSLMYPFVAPVSRAFSVGFGGLQYDTLVEMQEKACKRYASQLFLG
ARPPAGGPFQFMTFKEFDEQVSRARVLLQEAGIGKGDKVAAISANRVEWA
VCAYATFSVGAVWVPMYEQQRLKECEYILKDSGAKLLLVSKERIYDKSRH
FVDELPTLQDVWCFDMDFHPRMKVVDPAHFIPSVAVEPDDTSTLIYTSGT
TGTPKGVQLSHRNLTADVKGMSVVIPDDAIPVARSVAFLPWAHCFGKTCE
LHNALQRGAQVAVVEDLAALPAALLEVKPTMLYSVPTLFKRVYDKIQDKI
KNEKPFTKALIGRALAVAEKRRLLLQEGGSPGPLLSLQFQALDKIVLSKF
KAPLGGELNSSYVGGSAMPVEVANFFENIGVAICEGYGLTETSPLICVNP
FNTRVRRTGTVGQLIGDADVRIVKDSHEVDPGEEGEVWVAGPFVFSGYHN
KPAETAEAFAELHGTRYFKTGDLGRFVKGGLGVPLLKITGRVKELYKLEN
GKYVVPALIEKAMAEAEIVSQALVFGSDRPYNVAILVPNWEKLQAYGVEH
TGGEVTGLSTPEEIGAHPKIQAYIEEQLTTCCKDKVKKYEMPTRVLLIKD
AFSVENEMLTQKLSIKRHLVVDKYAQEIAALYAGDRTVMVA*

mRNA from alignment at chr24:259452..264717+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO24G00960.1 ID=NO24G00960.1|Name=NO24G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=5266bp|location=Sequence derived from alignment at chr24:259452..264717+ (Nannochloropsis oceanica)
TCGCTGAAGAAAGAAGCAGACCCGGAAGGCGCCCTCCTCTTTACATATAC
CACATAAGTGTCTCGTCCATGTTACGGGCCCTCACGATGTGCAGCGGAGT
CAGTTGCTTGTGTGGTCTAGGTGCGGAGGAGATCGCGAGCACTGTGCTTT
AGTCTGTGCGACGGACTATTTTTTAGCTGCTGTTTTTCTTTTCGCTTCTT
CAAGCTCAACTCACTGCTCTCTTGGTCTCTAGCACCCTCGCTCTGTACGT
ACAACTACACCACTTGCAATACATACATCTCACATGCGACAGCCGTTGCC
TCGACAAAAGCAGCAAAGGCTAGTTAGGTAAAACCAGGACGTGGTAGCGG
AGCTCCACTTGCCAAATCAAGCCCTCTGGCTCGTATTGCTTCGTGAGCAT
TCTAGCCAATGCTGCTGCACCGCTCCTCTTCGTCCCTACTGGCGGCCGGC
CGGACGGGAGTCATGGCCTCCCGGCGCATGGTCGTGGAGAAAGGACGACG
CAGGGCTGTCGAGGTATGCAGTTTTTATGTCTCCCATGTACATGCCTTGC
TCTCAATATGTGCGACCTCGCTTTCTTACAGCTGACCCTTTTTCCAATCA
CCCTCTTTTAGCTGTGCCTCGCGCAGACGCAGTCTCTAGCGCGGCGCAAG
ACTATAGCTCTGCCCTTTCCCTGGTCCTTGATGTATCCATTCGTGGCCCC
AGTGTCCAGGGCCTTCTCAGTGGGCTTTGGTGGCTTGCAGTATGACACGC
TAGTGGAGATGCAAGAAAAGTGAGTTATGTGGACGAAGAGAAAGGGAGGA
GTGGGAAGTAAGAAAGTATAATTTGTGTGATGTGTGTCGGAAGAAGACAA
GCGATCCCTCCCTTTGTAATTGTCAGAAATAGACTCTCCCGTCGCCCGTA
CTTATCCGTCTTAATCGTTTTCTTCCTCCCCTCCTCACCTACCCGTAGGG
CTTGCAAACGCTACGCCTCTCAGCTTTTCTTGGGCGCCCGTCCACCCGCC
GGCGGTCCCTTCCAATTTATGACATTTAAAGAATTTGATGAACAAGTGAG
CCGGGCCCGCGTCTTGCTTCAGGAGGCTGGGATAGGGAAGGGGGACAAGG
TAGGGAGAGGGGGCGGAGGGGAGGAGAGGTAGAAATGTGAGGGTGCCTGG
GGTATGTTCCCACCATTCTTCGAACGAAGAGAGTAATTTTCATGTTTTAC
GGTAGAAGGGCACATGGCGCTCATCGTCATCCCCCTCCCTTTGACCCGTT
GCGGCAGGTGGCGGCCATCAGCGCGAACCGGGTCGAGTGGGCCGTGTGCG
CCTACGCCACTTTTTCCGTGGGGGCGGTCTGGGTGCCCATGTACGAGCAG
CAGCGCCTCAAGGAGTGCGAGTACATCCTCAAGGACTCAGGTAGGGAGGG
AGCGAGGGAGGGAGGAAGGAGAAAGGGAGGAGGGAGGGACGAAGAATCGT
TGTCGTGAGTGGATGTCGTCTGCCTTCCCCGCTTGTCAGGGAGGGAGGGA
CCAAGTCGTTGCACTGGCCCGTACTCACGCCCCGCTCTATCCCCAACTCG
TTCCCCTTTCATGTTTGGCACAGGTGCCAAGCTGCTGCTGGTGTCGAAGG
AGCGTATCTACGACAAGAGCCGGCACTTCGTGGACGAGCTGCCCACCCTC
CAGGACGTGTGGTGCTTCGACATGGACTTCCACCCGCGCATGAAGGTAGC
GAAGGAAGGGGAAAGGAGGAAGAGAAAAAGGAGGGACAGGACGAGGAGGC
AGGGAGGACGAGGGGATTTCGCTGTGGGGTAGAGAGAGGAAGAAGGAGAG
GAGCAGCACGCCCTCCCCCGAAGCAGCGGATGTTTGGGGCAAATAGATGC
CACCGAGTCACCCCCTCCCCTTCCCTTCCCCCTCCTTCCCCTCCCTCTGC
CCCAAGGTGGTGGACCCAGCCCACTTCATCCCCTCTGTGGCCGTGGAGCC
CGATGATACGTCCACCCTTATCTACACGAGCGGCACCACGGGCACGCCTA
AGGGTGTACAGCTCTCCCACCGCAACCTTACGGCCGATGTCAAGGGTGAA
AAGGGAGGGAGGGAGAGAGGGAAGGAAGGAGGGAGGGGGGCAGTCTGTCT
GGTGTCGTTTCCTCCTGTCTCTGTCAAGACAAGGCAGTGTTGTTGTCACT
GCGTTTCGCTGGATGCGGTTCGAATGCCAACACTGTCTGGTTGCCTTGGA
GCTTTCACTCACCACTTCCTTCCTCCTCACCCTCCCCCCTCCCTCCCTCC
CTCGGGCCCCCAGGCATGTCCGTCGTGATCCCTGACGACGCCATCCCTGT
CGCCCGCTCCGTGGCCTTCCTGCCCTGGGCCCACTGCTTCGGCAAGACGT
GCGAGCTGCACAACGCCTTGCAGCGCGGGGCACAGGCAAGGAGGGGGGAA
AGGAGGGAGGGAAGAGAGAGGAGCAGGGTGCCGTTGACTTTTGACTCTCT
TTTGCTCACAATTTGCTTGACTCCCCTCCTGCCTCCTCCCTCTTCCCCCC
CTTAGGTGGCGGTGGTGGAGGACCTGGCCGCCCTCCCCGCGGCCCTGCTG
GAGGTGAAGCCCACCATGCTCTATTCGGTCCCCACCCTCTTCAAGCGGTG
TGTGCAGCCCCTACTCCTCCTTCCTCTCTCCCTTCCCTCCTTTCTGTTTC
TTTGCCCTTTACACGCGCTCTCTGTCGCTTCAAAGCTGCCTGCGGGGACC
ACTCATACTTGGAGGGACTCACTCTCCCCCCCCCCTTTCCCTGCCCGTCC
AACGCAGCGTCTACGACAAGATCCAGGACAAGATCAAGAACGAGAAGCCC
TTCACCAAGGCCCTCATCGGCCGCGCTCTGGCTGTGGCGGAGAAACGCCG
GCTGCTCCTGCAAGAGGGGGGGAGCCCCGGCCCCCTTCTGTCGCTGCAGT
TCCAGGCGCTCGATAAGATTGGTGAGGAGGGAGGGAGGGAGGGAGAGAGG
GAAGGAGGATTGGATGGACGGACACGTTGGCGATTAAATTCTTTCCTTGG
CTCTCGAATGGAACGGTCCAAATCCTATTTTTTCCACTCCCAATGTCTGA
TTTGATCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCTCCCTCTCCCTCG
GTGCCCAACCCAGTCCTGTCCAAGTTCAAGGCCCCCCTGGGCGGGGAGCT
CAACTCGTCCTACGTCGGGGGCTCGGCCATGCCTGTGGAGGTGGCCAACT
TCTTCGAGAACATCGGTACGTAGGGAGAACGGGATGGAAGAGGGGCATCA
AGGAGCACGAGGCACTCACTCTCTCCCGTTGTCTTAACCTCCCCCCAGGG
GTGGCCATTTGCGAGGGGTACGGCCTGACCGAGACCTCGCCCCTCATCTG
CGTCAATCCTTTCAACACCCGCGTCCGACGCACGGGCACGGTAAGCGAGC
GCTCCCTTCCTCCCTTGCTCTCTTCCTCTCTCCCTCGTTCCTTTCTTTCC
TCCTCCATACTTCTTCCCACTTCCTCTCCCCCCGCGGTTCCTCCCCTCCA
ACAGGTGGGGCAGCTGATCGGAGACGCCGACGTGCGGATCGTCAAGGACA
GCCACGAGGTGGATCCCGGGGAAGAGGGCGAGGTCTGGGTAAGTCCACCC
CTCTATCCCCCCTTCCCCCTCCCTCCCTCCTTCCCTTGGTGCTTCGCGAA
CATTCTCACGCCTCGTTCACCATCCTCGTCCTTCCTGCATCCCTCTCGCC
CCGCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTCCCCAGGTGGCC
GGGCCGTTCGTCTTCTCGGGCTACCACAATAAGCCCGCGGAGACAGCCGA
GGCCTTCGCCGAGCTGCATGGGACCAGGTGTGGGAGGGAGGAAGGGAGGG
AGGGAGGGACGGAGAAATGGACCATAAGGAGCCAGCGAGGAGTGAGGCGG
AGTCTGGGACTGGCGGGAGGAGGAGGTTGCGGAAGCAAAGACGGCTGTGA
AGCGGTGTGTTGATCCCTTTACCTGCCTCCTCCCCTCCCTCCCTTTCTCC
CTCCCAGGTACTTTAAGACAGGTGACTTGGGCCGGTTCGTTAAGGGCGGG
CTGGGCGTGCCCCTCCTCAAGATCACTGGCCGCGTCAAGGAGCTGTACAA
GCTCGAGAACGGTAGGGACGGAGGGAGGGAGGGGGGAAGGAGGGAGAGAG
GGAGAGGGGAAGGAAACATTGCAGACATCATTAGGTGATGAAAGAAGAGG
AGGGAGGGATAGAAGGAGGGAGGGAGCAAATCTGTCCTATACTCCTATCT
TGACTACCCCCTACTGACCCCCATCCCTCCCTCCCTCCTTCCCTCCCTCG
TGGCCTCTCAGGCAAGTACGTGGTGCCGGCCCTGATTGAAAAGGCCATGG
CCGAGGCCGAGATTGTCTCGCAGGCCCTGGTCTTCGGGTCCGACCGCCCC
TACAACGTGGCCATCCTGGTGCCCAACTGGGAGAAGCTGCAGGCGTACGG
CGTGGAGCACACGGGCGGCGAGGTCACCGGCTTGAGCACCCCAGAAGAGA
TCGGTAAGCCCTCCTCATCCTCCTCCTCCTCCAACTCCATTTCCGGTTAG
GGCTCGGGTTTGCGGCAGTGGTGCTTGGGCTGGGGTTTCCTTCATGTTCA
CATCTCACGCGGGGTGTGCTCCTCCATCGCCGCGGTCCGCACGAACGATC
GCTGCCCTTATTTCCACCCTCCCTCCCCGCTTCCCCGCCCTTCACAGGCG
CCCACCCCAAGATCCAGGCCTACATCGAGGAGCAGCTGACGACGTGCTGC
AAGGACAAGGTCAAGAAGTACGAGATGCCCACGCGCGTCCTCCTTATCAA
GGATGCCTTCTCCGTTGAGGTACGCCCTCCCTCCCTCCCTCCATTCATCC
TTCCCCTCTGCTGTCACCCCACGCCAAGACCAGACCGATCCACCTAATTC
CATCCCTCCCCCTCCCTCCTCCCCTCGTCAGAACGAGATGCTGACCCAAA
AGCTGTCCATCAAGCGGCACCTGGTCGTGGACAAGTACGCGCAGGAGATC
GCCGCGCTCTACGCCGGGGACAGGACGGTCATGGTGGCGTAGGCGGGGAG
GGCGAAGGAGAGGGGGGGGGCTTGTAAACTTTTCTGATGTTTTTTGGGGA
TGTGAGAGGAGGCAGGGGATGGGAGGAAGGGGAGGCAAAGGAAAGGAGGG
AGGACGCTAGAGTGGGGCGGAAGGGGAAATGAATAGTGAGGTAGTTTGGA
GAGAGGAGAGTCAAAGGACGAAGGGCGCATAAAAAAGCAAAGCAACTATT
GAAACAAAGACCCACA

Coding sequence (CDS) from alignment at chr24:259452..264717+

>NO24G00960.1 ID=NO24G00960.1|Name=NO24G00960.1|organism=Nannochloropsis oceanica|type=CDS|length=2076bp|location=Sequence derived from alignment at chr24:259452..264717+ (Nannochloropsis oceanica)
ATGCTGCTGCACCGCTCCTCTTCGTCCCTACTGGCGGCCGGCCGGACGGG
AGTCATGGCCTCCCGGCGCATGGTCGTGGAGAAAGGACGACGCAGGGCTG
TCGAGCTGTGCCTCGCGCAGACGCAGTCTCTAGCGCGGCGCAAGACTATA
GCTCTGCCCTTTCCCTGGTCCTTGATGTATCCATTCGTGGCCCCAGTGTC
CAGGGCCTTCTCAGTGGGCTTTGGTGGCTTGCAGTATGACACGCTAGTGG
AGATGCAAGAAAAGGCTTGCAAACGCTACGCCTCTCAGCTTTTCTTGGGC
GCCCGTCCACCCGCCGGCGGTCCCTTCCAATTTATGACATTTAAAGAATT
TGATGAACAAGTGAGCCGGGCCCGCGTCTTGCTTCAGGAGGCTGGGATAG
GGAAGGGGGACAAGGTGGCGGCCATCAGCGCGAACCGGGTCGAGTGGGCC
GTGTGCGCCTACGCCACTTTTTCCGTGGGGGCGGTCTGGGTGCCCATGTA
CGAGCAGCAGCGCCTCAAGGAGTGCGAGTACATCCTCAAGGACTCAGGTG
CCAAGCTGCTGCTGGTGTCGAAGGAGCGTATCTACGACAAGAGCCGGCAC
TTCGTGGACGAGCTGCCCACCCTCCAGGACGTGTGGTGCTTCGACATGGA
CTTCCACCCGCGCATGAAGGTGGTGGACCCAGCCCACTTCATCCCCTCTG
TGGCCGTGGAGCCCGATGATACGTCCACCCTTATCTACACGAGCGGCACC
ACGGGCACGCCTAAGGGTGTACAGCTCTCCCACCGCAACCTTACGGCCGA
TGTCAAGGGCATGTCCGTCGTGATCCCTGACGACGCCATCCCTGTCGCCC
GCTCCGTGGCCTTCCTGCCCTGGGCCCACTGCTTCGGCAAGACGTGCGAG
CTGCACAACGCCTTGCAGCGCGGGGCACAGGTGGCGGTGGTGGAGGACCT
GGCCGCCCTCCCCGCGGCCCTGCTGGAGGTGAAGCCCACCATGCTCTATT
CGGTCCCCACCCTCTTCAAGCGCGTCTACGACAAGATCCAGGACAAGATC
AAGAACGAGAAGCCCTTCACCAAGGCCCTCATCGGCCGCGCTCTGGCTGT
GGCGGAGAAACGCCGGCTGCTCCTGCAAGAGGGGGGGAGCCCCGGCCCCC
TTCTGTCGCTGCAGTTCCAGGCGCTCGATAAGATTGTCCTGTCCAAGTTC
AAGGCCCCCCTGGGCGGGGAGCTCAACTCGTCCTACGTCGGGGGCTCGGC
CATGCCTGTGGAGGTGGCCAACTTCTTCGAGAACATCGGGGTGGCCATTT
GCGAGGGGTACGGCCTGACCGAGACCTCGCCCCTCATCTGCGTCAATCCT
TTCAACACCCGCGTCCGACGCACGGGCACGGTGGGGCAGCTGATCGGAGA
CGCCGACGTGCGGATCGTCAAGGACAGCCACGAGGTGGATCCCGGGGAAG
AGGGCGAGGTCTGGGTGGCCGGGCCGTTCGTCTTCTCGGGCTACCACAAT
AAGCCCGCGGAGACAGCCGAGGCCTTCGCCGAGCTGCATGGGACCAGGTA
CTTTAAGACAGGTGACTTGGGCCGGTTCGTTAAGGGCGGGCTGGGCGTGC
CCCTCCTCAAGATCACTGGCCGCGTCAAGGAGCTGTACAAGCTCGAGAAC
GGCAAGTACGTGGTGCCGGCCCTGATTGAAAAGGCCATGGCCGAGGCCGA
GATTGTCTCGCAGGCCCTGGTCTTCGGGTCCGACCGCCCCTACAACGTGG
CCATCCTGGTGCCCAACTGGGAGAAGCTGCAGGCGTACGGCGTGGAGCAC
ACGGGCGGCGAGGTCACCGGCTTGAGCACCCCAGAAGAGATCGGCGCCCA
CCCCAAGATCCAGGCCTACATCGAGGAGCAGCTGACGACGTGCTGCAAGG
ACAAGGTCAAGAAGTACGAGATGCCCACGCGCGTCCTCCTTATCAAGGAT
GCCTTCTCCGTTGAGAACGAGATGCTGACCCAAAAGCTGTCCATCAAGCG
GCACCTGGTCGTGGACAAGTACGCGCAGGAGATCGCCGCGCTCTACGCCG
GGGACAGGACGGTCATGGTGGCGTAG

Synonyms

Publications