NO24G00770.1, NO24G00770.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G00770.1
Unique NameNO24G00770.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length794
Alignment locationchr24:224816..226051 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:224816..226051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G00770.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00770NO24G00770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G00770.1NO24G00770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G00770.1.cds1NO24G00770.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00770.1.cds2NO24G00770.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00770.1.cds3NO24G00770.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00770.1.cds4NO24G00770.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G00770.1 ID=NO24G00770.1|Name=NO24G00770.1|organism=Nannochloropsis oceanica|type=mRNA|length=794bp
ATGAAAAAGTCCCCATCCCCGACTTCGAGCAGCAGAAGTAGCATCAGCGC
TAACGCTTTAGTGCGGAGCACTATGGCCCGAGTCTCCTCCTTGGCCCGGC
CTTCAGACGATTGTGTGGCTCGACTCATTGCACTCGAGGCCGCGACCGCT
GCCCGTAGCAGAAGGCGTGATGCAGTGACCGCTCCCGCCATGCAGAAGAA
GGCCGTTATAAACAAGAACTTTCTGGCCAACACCATCCGAAGTGTCTCCG
ACCACAACCGCCGAGAGGAGGAATCGGACTGCTGGCGGGCTCATGGGCAA
CAGAAGGTGGCGGAGGACTATGGAGGAAGGGGAAGGGGGGAGAGGCATGA
TGACGGCGATCGAAGGAGGGGAGGGTGTGGAGGGGAAAGTAGGGCGGTAG
ATCCCACCACATCTCACTCTTCCTTGTCTTTCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTT
CTGCGAAGATCCTAACAAGGAGGACAAAAAAGTGAAAGAGAAGAAGAAAG
GAGAGAAGAAGCGGCGACGTAGCCGTCGCAGTTCCACCCAGGAAAGTTAC
GGCAACAAAGAAAGGGACAAAGAGAGCGACCCCTGGCCGACGCGCAAGCG
GAAGGAAACAGACAAAAAGGCCAAGAAGAGCAAGAAGAACAAAAACGGCA
AGAAGAGGAAGAGGAACATTATTTCTTAAAAGTAGGATAAATGCATGTGA
CAAGCAACAGAAAAGCAGTATTTCAGAATATGAAAGTGGCGGAA
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protein sequence of NO24G00770.1

>NO24G00770.1-protein ID=NO24G00770.1-protein|Name=NO24G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bp
MKKSPSPTSSSRSSISANALVRSTMARVSSLARPSDDCVARLIALEAATA
ARSRRRDAVTAPAMQKKAVINKNFLANTIRSVSDHNRREEESDCWRAHGQ
QKVAEDYGGRGRGERHDDGDRRRGGCGGESRAVDPTTSHSSLSFSSSSSS
SSSSSSSSFSSSSSSSFCEDPNKEDKKVKEKKKGEKKRRRSRRSSTQESY
GNKERDKESDPWPTRKRKETDKKAKKSKKNKNGKKRKRNIIS*
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mRNA from alignment at chr24:224816..226051-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G00770.1 ID=NO24G00770.1|Name=NO24G00770.1|organism=Nannochloropsis oceanica|type=mRNA|length=1236bp|location=Sequence derived from alignment at chr24:224816..226051- (Nannochloropsis oceanica)
ATGAAAAAGTCCCCATCCCCGACTTCGAGCAGCAGAAGTAGCATCAGCGC TAACGCTTTAGTGCGGAGCACTATGGCCCGAGTCTCCTCCTTGGCCCGGC CTTCAGACGATTGTGTGGCTCGACTCATTGCACTCGAGGTAAGTAGAGAT ATGGACAGGCAGAGGTGAGGATGGGAAAAGATCGAGGAAATGTAGTTTTG TTACTCCCCAATATGGACCACCTAATGACAGGCCGCGACCGCTGCCCGTA GCAGAAGGCGTGATGCAGTGACCGCTCCCGCCATGCAGAAGAAGGCCGTT ATAAACAAGAACTTTCTGGCCAACACCATCCGAAGGTAAGTAGAGAGAAG TGAGGATGAGAGAAGCACGCCCGTCTTGTCTGCATGCATGCATACGGCCG TTGCCTTATCCAGTCATATCCTTCTTCCTTCTCTCCACCACAGTGTCTCC GACCACAACCGCCGAGAGGAGGAATCGGACTGCTGGCGGGCTCATGGGCA ACAGAAGGTGGCGGAGGACTATGGAGGAAGGGGAAGGGGGGAGAGGCATG ATGACGGCGATCGAAGGAGGGGAGGGTGTGGAGGGGAAAGTAGGGTAGGA GAGGAGAGGGAGCGAAAGAGGTTACGTTCAGGCTCAAGAGGTTCGCGGAT CGGGGACCGGAGGGAGGAGGAGGAGATTTCAGGAAGACAGAGGGGGAAGG ATGAGGAGGATGGGAGGGGGAGGAGGAGGAGGAGGGAATTGAAGAAGGGG GATTGTTCGAGGCAGGCGGGTGGTTGGAGGTGATGATAATGTTGTGGTGG ATGTGTCGAAGGCAACGGTGACTGCGATAATTCAGGCGGTAGATCCCACC ACATCTCACTCTTCCTTGTCTTTCTCCTCCTCCTCCTCCTCCTCCTCCTC CTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTTCTGCGAAG ATCCTAACAAGGAGGACAAAAAAGTGAAAGAGAAGAAGAAAGGAGAGAAG AAGCGGCGACGTAGCCGTCGCAGTTCCACCCAGGAAAGTTACGGCAACAA AGAAAGGGACAAAGAGAGCGACCCCTGGCCGACGCGCAAGCGGAAGGAAA CAGACAAAAAGGCCAAGAAGAGCAAGAAGAACAAAAACGGCAAGAAGAGG AAGAGGAACATTATTTCTTAAAAGTAGGATAAATGCATGTGACAAGCAAC AGAAAAGCAGTATTTCAGAATATGAAAGTGGCGGAA
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Coding sequence (CDS) from alignment at chr24:224816..226051-

>NO24G00770.1 ID=NO24G00770.1|Name=NO24G00770.1|organism=Nannochloropsis oceanica|type=CDS|length=729bp|location=Sequence derived from alignment at chr24:224816..226051- (Nannochloropsis oceanica)
ATGAAAAAGTCCCCATCCCCGACTTCGAGCAGCAGAAGTAGCATCAGCGC
TAACGCTTTAGTGCGGAGCACTATGGCCCGAGTCTCCTCCTTGGCCCGGC
CTTCAGACGATTGTGTGGCTCGACTCATTGCACTCGAGGCCGCGACCGCT
GCCCGTAGCAGAAGGCGTGATGCAGTGACCGCTCCCGCCATGCAGAAGAA
GGCCGTTATAAACAAGAACTTTCTGGCCAACACCATCCGAAGTGTCTCCG
ACCACAACCGCCGAGAGGAGGAATCGGACTGCTGGCGGGCTCATGGGCAA
CAGAAGGTGGCGGAGGACTATGGAGGAAGGGGAAGGGGGGAGAGGCATGA
TGACGGCGATCGAAGGAGGGGAGGGTGTGGAGGGGAAAGTAGGGCGGTAG
ATCCCACCACATCTCACTCTTCCTTGTCTTTCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTT
CTGCGAAGATCCTAACAAGGAGGACAAAAAAGTGAAAGAGAAGAAGAAAG
GAGAGAAGAAGCGGCGACGTAGCCGTCGCAGTTCCACCCAGGAAAGTTAC
GGCAACAAAGAAAGGGACAAAGAGAGCGACCCCTGGCCGACGCGCAAGCG
GAAGGAAACAGACAAAAAGGCCAAGAAGAGCAAGAAGAACAAAAACGGCA
AGAAGAGGAAGAGGAACATTATTTCTTAA
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Synonyms
Publications