NO23G01800.1, NO23G01800.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01800.1
Unique NameNO23G01800.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5452
Alignment locationchr23:651514..658065 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:651514..658065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO23G01800.1 vs.
Match: EWM27778.1 (transitional endoplasmic reticulum atpase [Nannochloropsis gaditana])

HSP 1 Score: 1481.8 bits (3835), Expect = 0.000e+0
Identity = 800/964 (82.99%), Postives = 844/964 (87.55%), Query Frame = 0
Query:   80 MAPTEGRRRQATLAAAPAPTPMAPGGMRQRRRRPLSSSLRFISTSSPLILNLITLLGCCAVTLAAISGPSSLGSQFFGLKARHSAMQCDDDTTTPFMTTTTSTPRWLQLIRGG------ASAAPVGKKKGTGKKKKAAAAAAAAAEKVPPPAVAPEKEEKPA------IVENAPTPRKVKNSFIVDEAVNEDHSMVALSKDTMARLDLFQGDFVMLKGKKRKDTVCVAVPDDTLDDAHVRLTKTVRGNLRVHLSDAISLSKVEDVKTGKKVVVVPFADTIQGLKGDLFETFVEPYFKETYRPVRVGDTFLARGGMRAVEFKVLSVEVEGGKEEGEESEGAKYCIVGDETEVEISEEALNREDDERLDELGYDDIGGCKKQLAMIRELVELPLRHPQLFRSVGIPPPRGVLLYGPPGSGKTMIAKAVAAETNAYFFTINGPEIMSKMSGESESKLRKAFEDAEKNAPAILFIDELDAIAPKRDKAGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDRELDIGVPDDEGRLEVLKIKTRNMKLSPDMDLALVAKDTHGFVGADIAQLCMEAALQCIREKMGDIDIDDEEIDAKLLDSLMITNEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSGGGGSEAGDRVINQILTEIDGVGARKSVFVIGATNRPDILDSAITRPGRLDQLVYIPLPDFGSRLSIFNANLRKSPVAPDVDLEAMSEATQGFSGADISEICQRAAKNAIRESIFAEVERARRIEEGLEEAKEEGEEEDPVPFITKLHFEEAMGRARKSVSEADIRKYDAFNAQMKADRGFGEFKFGEGEGEEGTEGGEGGKEEEDLY 1032
            M P EG R  A L   PA +      + QRRRRP   S    + S+ L L +I LLG  AVTLA+I  P S G +F GL+   S ++   D+     T   S+PRWLQ++RGG      A+A   GKKK  GKKKK  AAA +  E    P V+ ++E K            AP P+K K++FIVDEAVNED SMVALS  TMA L LFQGDFV+LKGKKRK+TV VAVPD+TLDDAHVRLTK VRGNLRVHLSDA+SL+++EDVKTG+KVVVVPFADTIQGLKGDLFETFVEPYFKETYRPVRVGDTFLARGGMRAVEFKV+ VEVEG  E+G E   A YCIVGDETEVEI EEALNREDDERLDELGYDDIGGCKKQLAMIRELVELPLRHPQLFRSVGIPPPRGVLLYGPPGSGKTMIAKAVAAETNAYFFTINGPEIMSKMSGESESKLRKAFEDAEKNAPAILFIDELDAIAPKRDKAGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDRELDIGVPDD+GRLEVLKIKTRNMKLSPD+DLALVAKDTHGFVGADI+QLCMEAALQCIREKMGDIDID+EEIDAK+LDSLMI NEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSG GGSEAGDRVINQILTEIDGVGARKSVFVIGATNRPDILDSAITRPGRLDQLVYIPLPD+ SRLSIFNANLRKSPVAPDVDLEAM+EATQGFSGADISEICQRAAKNAIRESIFAEVE+ARR+EEG    +EE EEEDPVPFITKLHFEEAMGRARKSVSEADIRKYDAFNAQMKADRGFGEFKFGEG GE   EG +G + EEDLY
Sbjct:    1 MMPFEGTRPHAAL---PAHSDRGALEVSQRRRRPPLVS----NVSTSLSLGIIVLLGLSAVTLASIHRPFSFGGRFMGLQEGSSGIRIGSDS---LATRAKSSPRWLQVVRGGAVAVDTATAESKGKKKAGGKKKKRKAAATSGDEAAVIPPVSAKEEGKVGEEGGFQEASQAPAPKKTKSTFIVDEAVNEDQSMVALSPATMASLGLFQGDFVLLKGKKRKETVGVAVPDETLDDAHVRLTKGVRGNLRVHLSDAVSLTQLEDVKTGRKVVVVPFADTIQGLKGDLFETFVEPYFKETYRPVRVGDTFLARGGMRAVEFKVVGVEVEG--EDGGE---AAYCIVGDETEVEIREEALNREDDERLDELGYDDIGGCKKQLAMIRELVELPLRHPQLFRSVGIPPPRGVLLYGPPGSGKTMIAKAVAAETNAYFFTINGPEIMSKMSGESESKLRKAFEDAEKNAPAILFIDELDAIAPKRDKAGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDRELDIGVPDDDGRLEVLKIKTRNMKLSPDIDLALVAKDTHGFVGADISQLCMEAALQCIREKMGDIDIDEEEIDAKILDSLMIDNEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSGAGGSEAGDRVINQILTEIDGVGARKSVFVIGATNRPDILDSAITRPGRLDQLVYIPLPDYKSRLSIFNANLRKSPVAPDVDLEAMAEATQGFSGADISEICQRAAKNAIRESIFAEVEKARRVEEG----EEEREEEDPVPFITKLHFEEAMGRARKSVSEADIRKYDAFNAQMKADRGFGEFKFGEG-GEGEGEGEDGKEGEEDLY 944          
The following BLAST results are available for this feature:
BLAST of NO23G01800.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27778.10.000e+082.99transitional endoplasmic reticulum atpase [Nannoch... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01800NO23G01800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01800.1NO23G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01800.1.cds1NO23G01800.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01800.1.cds2NO23G01800.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01800.1.cds3NO23G01800.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01800.1.cds4NO23G01800.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01800.1.cds5NO23G01800.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01800.1.cds6NO23G01800.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01800.1 ID=NO23G01800.1|Name=NO23G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=5452bp
CATACTTGACGCAACAGCAACTCTCAAAGAGCCCAATCCAAACAAGCCAG
TGCTTGGGCGACCAAGTGCTCATGATTTCTATCGTGTCCCTCCCACTATG
TCGATGTTTATCTCGAACCCTTTCTATGCGTTCTTTGGTTTGTTTTTTGC
ATCATCGCGAAGCACCGCCCCACATCCCCTGTTGCTTCAATCAGGGCCGT
GATCCTTTACCTTTACCAACCCAACCCTCTGCCCTCATAGAAACCAAAAA
CAGGACGGGTCCCAGAGGAGTAGCAGCTCACGTGTGTACTCCCGACTACT
TCACGGCCATGGCGCCCACGGAGGGAAGAAGACGGCAAGCCACCCTTGCG
GCGGCTCCTGCTCCCACTCCCATGGCCCCTGGCGGGATGCGACAACGACG
ACGACGACCCTTATCATCATCACTGCGCTTCATCAGCACTTCCAGCCCCC
TTATCCTAAACCTGATTACCTTATTGGGATGCTGCGCCGTGACACTGGCT
GCCATCTCTGGCCCCTCTTCCTTAGGCAGCCAGTTTTTTGGTCTCAAGGC
TCGACACAGCGCCATGCAGTGCGACGACGACACCACCACCCCATTCATGA
CCACCACTACCAGCACTCCCCGCTGGCTCCAACTCATCCGGGGCGGAGCC
AGTGCCGCCCCCGTCGGGAAAAAGAAGGGGACGGGAAAGAAGAAGAAAGC
TGCCGCGGCAGCAGCGGCGGCTGCCGAAAAGGTGCCCCCCCCCGCAGTGG
CGCCGGAGAAAGAAGAGAAGCCAGCTATAGTAGAAAATGCTCCGACCCCG
CGGAAGGTTAAGAACAGCTTTATCGTGGACGAGGCCGTGAATGAAGACCA
CAGCATGGTAGCCCTCTCGAAGGATACTATGGCGCGGCTGGACCTGTTCC
AAGGGGACTTCGTCATGCTGAAAGGGAAGAAGAGGAAGGACACAGTCTGC
GTGGCTGTACCGGACGACACCCTCGATGACGCCCATGTCCGCCTGACCAA
GACCGTGCGAGGGAACCTGCGCGTGCACCTGTCGGACGCCATTTCGCTCT
CCAAGGTGGAGGACGTCAAGACGGGGAAGAAGGTGGTGGTGGTACCTTTC
GCCGACACCATCCAGGGCTTGAAAGGCGACCTTTTTGAGACCTTTGTCGA
GCCTTACTTCAAGGAGACGTACCGCCCCGTGCGGGTGGGAGACACGTTTC
TGGCCCGGGGGGGCATGAGGGCGGTGGAGTTCAAGGTGCTGAGCGTGGAG
GTGGAGGGAGGGAAGGAAGAAGGGGAGGAGAGTGAGGGGGCGAAATATTG
CATCGTGGGGGATGAAACAGAGGTTGAGATTAGTGAGGAGGCTTTGAATA
GAGAGGATGACGAGAGGCTGGACGAGCTCGGGTATGACGACATCGGGGGG
TGCAAGAAGCAGCTGGCCATGATCAGGGAGCTAGTAGAGCTTCCATTGCG
ACATCCGCAGCTGTTTCGCTCTGTAGGTATCCCCCCTCCGCGAGGTGTGC
TCCTGTATGGCCCTCCCGGGTCGGGGAAGACCATGATTGCCAAGGCCGTG
GCAGCGGAGACGAATGCCTATTTCTTCACGATCAACGGGCCCGAGATTAT
GAGCAAGATGTCGGGCGAGTCTGAATCCAAGTTACGCAAGGCGTTCGAGG
ATGCGGAGAAAAACGCGCCTGCCATTCTCTTTATTGACGAGCTGGATGCC
ATTGCTCCCAAACGAGACAAAGCCGGAGGAGAGGTGGAACGGCGCATCGT
CTCTCAGATGCTCACCCTCCTGGATGGGATCAAGCCCTCGTCCAATGTGG
TGGTGATGGCAGCCACCAACCGCCCTAATCAGATCGATCCGGCCCTGCGT
CGGTTCGGTCGTTTCGATCGCGAGCTGGACATTGGCGTCCCTGACGACGA
AGGCCGCCTGGAGGTCCTCAAGATCAAGACAAGAAACATGAAACTCTCCC
CCGACATGGACCTGGCGCTGGTCGCGAAGGACACCCACGGGTTTGTCGGC
GCCGACATTGCCCAATTGTGCATGGAGGCGGCGTTGCAGTGCATTCGAGA
GAAGATGGGCGATATTGACATTGACGACGAGGAGATCGACGCGAAGCTCC
TCGACTCCCTCATGATCACCAACGAGCACTTCAGGCACGCTATGTCCGTC
TGCAACCCCTCCGCCCTCCGAGAGACCCAAGTGGAGGTGCCTGATGTGAC
GTGGGAGGATGTCGGCGGGCTCGAGGACGTGAAGCGGGAGCTGGCCGAGA
CGATCCAATACCCTGTGGAGTACGCAGCCAAATACGAGAAATTCGGCATG
CCCGCCGCCCGTGGTGTCCTTTTCTACGGTCCTCCCGGCTGCGGCAAGAC
CCTTCTGGCCAAAGCCGTCGCCAACGAATGTGGCGCCAATTTCATCAGTA
TCAAGGGCCCCGAGCTTCTGACAATGTGGTTCGGCGAGTCCGAGGCGAAC
GTCCGCGACCTCTTCGATAAGGCCCGTGCTGCCGCACCGTGCATCCTGTT
CTTTGACGAGATGGACTCCATCGCCAAGGCCCGAGGCTCCGGCGGGGGAG
GAAGCGAAGCCGGCGACCGTGTCATCAATCAAATTTTGACGGAGATCGAC
GGCGTGGGTGCCCGGAAGAGCGTCTTTGTTATCGGGGCGACCAACAGACC
CGACATCCTCGACAGTGCCATCACGCGCCCTGGGCGTCTCGACCAGCTGG
TCTACATTCCTCTTCCTGACTTTGGCTCCCGCCTCTCCATCTTCAACGCG
AACCTGCGCAAGTCTCCCGTCGCCCCTGACGTGGATCTAGAGGCAATGAG
CGAGGCCACCCAAGGGTTCTCCGGGGCTGATATTTCAGAGATTTGTCAAC
GAGCTGCCAAGAACGCAATTCGAGAGAGCATATTTGCAGAGGTGGAGAGG
GCGAGGCGGATTGAGGAGGGGTTGGAGGAAGCGAAGGAGGAAGGGGAGGA
GGAGGACCCGGTGCCCTTCATTACCAAATTGCACTTCGAGGAGGCGATGG
GGAGGGCGAGGAAGAGTGTGAGCGAGGCGGACATTCGAAAGTACGACGCG
TTCAATGCGCAAATGAAGGCGGATAGGGGATTTGGGGAGTTTAAGTTTGG
AGAGGGGGAGGGGGAGGAGGGGACAGAGGGCGGGGAGGGGGGGAAGGAGG
AAGAGGATTTGTATTAATTGAGTCAGGGGGGGAAGTGTGGATGTGTGTGA
GGAGGAGGAGGAGAGGTAGGCACACATGAGGGAAAGAGGGAAGAGGATGC
GAAGTACAGGGAATGGATAGGGGGAAGAGAGAAGAAGAAGAGAAAGACGG
AGAGAGGAAGTCATGAGGCAATGAGACGAAGGTTCTCAGCGAGAGGAGAG
AGGAGAGCGGAGGGTGGCGAGCAGAGGAATGAAATGCAGGTCTTTGGCGT
GGTGGTCTTGGTCGCTGACTACCTCTATCACCGGAAAAACGGAGGAGTAA
GAAGAACAAAGAAAAGAGGGAGGAGGAGGAAGAGACAAGCAGCAGCAACA
ACAGACAAAAAGACAGGGAATCGAGAAACAAAAAAGAAAACAAGCCAGAC
AGATTTAGACCACAAGCTTGAAGCACACGATTATTCATGCACGCCCATCC
CAAATTGACACACAAAAAATATAATGTCGTCATGATACTCTCAATCATTC
ACAGTGCACACAAGCCACCCAGGTCACGAGGACTCCTCCTCCCTTCCTCT
CTTCTACCTTTCCCTCTCCCCTCGCGGCCCCCAAAATTCCAACACACTCT
CCCCCGCCTCCCTTCCCTGAAGCACCTCCACCGTCACCCCCATCCCTGCC
TCATTCCCTCCCTCTCTTCCTATTCTATACCCAACCACGGCTGGCGCGGC
TCTTGAGCAATAGCGAGAAAACAAGGCCAGAGTGTACCCTCCGACATCAT
GCACGACAAGCCAGTCTCCTGACTCAACTTTTGGTAACTTTATGCCGCTT
ACAATCACGTCCCCCGCAAAGCACAGAGGCCCAGCCAGATTGTGAAGGCG
AGGGGTGCGTGCGTGCACTTGCCCTTCCTCCTTCCCTCCTTCCTTTACTT
CGGCCAGGTGGCCATCTTTGTCGTGCACTGTAAATCGATGGTAGAACTTC
CCCGGCACGTAGCACTCGCGCAACAACACGTCGGCACCCGCATGCAGAAT
TGCCGTTCGCAATCCTGTCGTCCCGCGTCCTCCCTCTTCCTCCCTTTGTC
CCTCCCTCCCGTCTTCCTCCTGGTTGTCAAAAGCGTACTCCACCCGGCTG
GCAAGCCAGGCAGTTTTCGCCGTAAGGGAGCGACCATACTCCGTCACTAC
CCTCACGCAAGGACCACTGCTACTGCTGCCACTGCTGCCATTGCTTCCGT
TTCTATTCGAGGAAGAAAGTGGGGGCGGAACGAAAAGAGAAGGAGCCGCC
TCCCTCAAAACCTCCACCAGCTGCGCATGAGTAGGCATGGCTTGATTCGA
TAGATAATTCGCGGCCAACCCCCCTCCGATATCCAACGTGGTGATCCTTC
TCCTTCCCTCCATCTCTGCCCCATTCTTAGAAAGCGATTCCTCTACTTCT
TCTGTGAGGGCGATGAGGACCTTAACGCCTTGTGCTAGTTGATCCATCCC
GAGTCCTTGCGACCCGACGTGTATGTGGAGGCCAGTCAGCCAGGGGTACT
TATGGAAGTAGGAGATGACTTTATGTTTATTGCTCAAGGAAAAATAAGAG
GAGGAACAAGGAAAAGAAGAAGAGGAGAAGGAGGAGGTGTCGAGGGTGAG
GGGGACACCGAATTTGGATGTGGCAGTGGCGACGCTGAGTTCTTGGATTG
TACCCGCGCCGACGAGGGGGTTGATACGCAAGCCGATGGAGGGAGGGGGA
AAAGTGGAGGAGGATGTTGCTGAGAGGATGGAGGCAATGCGATCAAGTTC
CTCGAGAGTGTTGGCGTTGATGTGAATACCTTTGGACAAGGCGAAGTCCA
GCTCTTTGTAGGTCTTGGCGGGGGAGTCAAAGACAATCTTTTCCGGGGGA
CAGCCGTGAAAGAGGGCGCTTTCGACCTCTAGAATTGAAGCAGCTTCGAG
TCCTAGCCCTGCCCGAATGGCTGCTTGGAGGATGAAGCCCATGGGTGCGG
CTTTGATGGCATAGCAGTGGAGGAAATGAAGGGGGAAGGCTTTGACGAGG
CTGTCGAACCCCGTATGCAAGGCATCCAAGTCATAGGCAATCACCACGTC
TTCCCCTGCGCGGGCCTTGGAGGGCTGCAGGATACCTTGGGCACGCAATG
ATTGGAGGACTATTTGCACCTGGCGGGAGTCGTAGGCGGCGGGCGGCATG
GTTGATATGCTTTAGGGAGCGGGTTGGGTTGTAGGTCGATTTAGAGGGAG
GTCGAGGGAGTAATGGCAGTAGGGTAGCTAAAGAGAGGCTTGCTGGTGGC
AGACTTTAGAAAGCGGCTGGTTATCCCTCTGCACGTTGTGTCTGCTGTGT
TT
back to top

protein sequence of NO23G01800.1

>NO23G01800.1-protein ID=NO23G01800.1-protein|Name=NO23G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1032bp
MISIVSLPLCRCLSRTLSMRSLVCFLHHREAPPHIPCCFNQGRDPLPLPT
QPSALIETKNRTGPRGVAAHVCTPDYFTAMAPTEGRRRQATLAAAPAPTP
MAPGGMRQRRRRPLSSSLRFISTSSPLILNLITLLGCCAVTLAAISGPSS
LGSQFFGLKARHSAMQCDDDTTTPFMTTTTSTPRWLQLIRGGASAAPVGK
KKGTGKKKKAAAAAAAAAEKVPPPAVAPEKEEKPAIVENAPTPRKVKNSF
IVDEAVNEDHSMVALSKDTMARLDLFQGDFVMLKGKKRKDTVCVAVPDDT
LDDAHVRLTKTVRGNLRVHLSDAISLSKVEDVKTGKKVVVVPFADTIQGL
KGDLFETFVEPYFKETYRPVRVGDTFLARGGMRAVEFKVLSVEVEGGKEE
GEESEGAKYCIVGDETEVEISEEALNREDDERLDELGYDDIGGCKKQLAM
IRELVELPLRHPQLFRSVGIPPPRGVLLYGPPGSGKTMIAKAVAAETNAY
FFTINGPEIMSKMSGESESKLRKAFEDAEKNAPAILFIDELDAIAPKRDK
AGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDR
ELDIGVPDDEGRLEVLKIKTRNMKLSPDMDLALVAKDTHGFVGADIAQLC
MEAALQCIREKMGDIDIDDEEIDAKLLDSLMITNEHFRHAMSVCNPSALR
ETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVL
FYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDK
ARAAAPCILFFDEMDSIAKARGSGGGGSEAGDRVINQILTEIDGVGARKS
VFVIGATNRPDILDSAITRPGRLDQLVYIPLPDFGSRLSIFNANLRKSPV
APDVDLEAMSEATQGFSGADISEICQRAAKNAIRESIFAEVERARRIEEG
LEEAKEEGEEEDPVPFITKLHFEEAMGRARKSVSEADIRKYDAFNAQMKA
DRGFGEFKFGEGEGEEGTEGGEGGKEEEDLY*
back to top

mRNA from alignment at chr23:651514..658065-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01800.1 ID=NO23G01800.1|Name=NO23G01800.1|organism=Nannochloropsis oceanica|type=mRNA|length=6552bp|location=Sequence derived from alignment at chr23:651514..658065- (Nannochloropsis oceanica)
CATACTTGACGCAACAGCAACTCTCAAAGAGCCCAATCCAAACAAGCCAG TGCTTGGGCGACCAAGTGCTCATGATTTCTATCGTGTCCCTCCCACTATG TCGATGTTTATCTCGAACCCTTTCTATGCGTTCTTTGGTTTGTTTTTTGC ATCATCGCGAAGCACCGCCCCACATCCCCTGTTGCTTCAATCAGGGCCGT GATCCTTTACCTTTACCAACCCAACCCTCTGCCCTCATAGAAACCAAAAA CAGGACGGGTCCCAGAGGAGTAGCAGCTCACGTGTGTACTCCCGACTACT TCACGGCCATGGCGCCCACGGAGGGAAGAAGACGGCAAGCCACCCTTGCG GCGGCTCCTGCTCCCACTCCCATGGCCCCTGGCGGGATGCGACAACGACG ACGACGACCCTTATCATCATCACTGCGCTTCATCAGCACTTCCAGCCCCC TTATCCTAAACCTGATTACCTTATTGGGATGCTGCGCCGTGACACTGGCT GCCATCTCTGGCCCCTCTTCCTTAGGCAGCCAGTTTTTTGGTCTCAAGGC TCGACACAGCGCCATGCAGTGGTACGTGTAGGGATCGACGATGTGGATGA ATGAACGATGTCCCTCCTTCTCTGCCTTGGCTTACTCATATTGTTCATGC TCCTTTGTTTATGAATAATGTGTGCTTTTTCGTTCAGGATGATGGCAGCA TGAGCATCTTTCCTCCCTCCTACCCCTCTCCCCCATTATGACAAGAGCAC GTCTCCCTCCCTCCCTCCATTCGTCCTTCTCATCCACCTCCCCCTCGTTC ACACCAACACAGCGACGACGACACCACCACCCCATTCATGACCACCACTA CCAGCACTCCCCGCTGGCTCCAACTCATCCGGGGCGGAGCCAGTGCCGCC CCCGTCGGGAAAAAGAAGGGGACGGGAAAGAAGAAGAAAGCTGCCGCGGC AGCAGCGGCGGCTGCCGAAAAGGTGCCCCCCCCCGCAGTGGCGCCGGAGA AAGAAGAGAAGCCAGCTATAGTAGAAAATGCTCCGACCCCGCGGAAGGTT AAGAACAGCTTTATCGTGGACGAGGCCGTGAATGAAGACCACAGCATGGT AGCCCTCTCGAAGGATACTATGGCGCGGCTGGACCTGTTCCAAGGGGACT TCGTCATGCTGAAAGGGAAGAAGAGGAAGGACACAGTCTGCGTGGCTGTA CCGGACGACACCCTCGATGACGCCCATGTCCGCCTGACCAAGACCGTGCG AGGGAACCTGCGCGTGCACCTGTCGGACGCCATTTCGCTCTCCAAGGTGG AGGACGTCAAGACGGGGAAGAAGGTGGTGGTGGTACCTTTCGCCGACACC ATCCAGGGCTTGAAAGGCGACCTTTTTGAGACCTTTGTCGAGCCTTACTT CAAGGAGACGTACCGCCCCGTGCGGGTGGGAGACACGTTTCTGGCCCGGG GGGGCATGAGGGCGGTGGAGTTCAAGGTGCTGAGCGTGGAGGTGGAGGGA GGGAAGGAAGAAGGGGAGGAGAGTGAGGGGGCGAAATATTGCATCGTGGG GGATGAAACAGAGGTTGAGATTAGTGAGGAGGCTTTGAATAGAGAGGATG ACGAGAGGCTGGACGAGCTCGGGTATGACGACATCGGGGGGTGCAAGAAG CAGCTGGCCATGATCAGGGAGCTAGTAGAGCTTCCATTGCGACATCCGCA GCTGTTTCGCTCTGTAGGTATCCCCCCTCCGCGAGGTGTGCTCCTGTATG GCCCTCCCGGGTCGGGGAAGACCATGATTGCCAAGGCCGTGGCAGCGGAG ACGAATGCCTATTTCTTCACGATCAACGGGCCCGAGATTATGAGCAAGGT GGGTGCTCGTGCAAAAACTCTTCCTCCTTCCCGAAACCCTTCCCAGCCAG CCTTCCTATCTTCCTTAACATAATCACGCCAACCTTCATGTCATTTCGCC CTTCCTCCATGGTGTCCTCCATCCATCCCTTCCTCCCTTCCTTGCGTACT CCCTCCCTTCTTTCCTCCTCCTCTTCTTGTATAAACCCGGCGGCCACCCG GAATCAAGCTTTACAGCTTTGTCAGGGCGCCGAGAAGAATGCACTTAGCA CCCGTCCCTCCGCTAACGCTTCCCTCCTTCCCTCCCTCCCTCCCTCTCAG ATGTCGGGCGAGTCTGAATCCAAGTTACGCAAGGCGTTCGAGGATGCGGA GAAAAACGCGCCTGCCATTCTCTTTATTGACGAGCTGGATGCCATTGCTC CCAAACGAGACAAAGCCGGAGGAGAGGTACTGAGGGAGGGAGGGCAGGAG GGAGGGAGGGAGAGAAGAAGGACCTACCTGTATCTATTGTATTTCTTCTA ATGCCCTCTTCGCCCGCCCGCCCTCCCTTCCTCCCTCCCTTCCTCCCCCC TTCCTCCCCCCCTTCCTCCCCCCCTTCCTCCCTCCCAGGTGGAACGGCGC ATCGTCTCTCAGATGCTCACCCTCCTGGATGGGATCAAGCCCTCGTCCAA TGTGGTGGTGATGGCAGCCACCAACCGCCCTAATCAGATCGATCCGGCCC TGCGTCGGTTCGGTCGTTTCGATCGCGAGCTGGACATTGGCGTCCCTGAC GACGAAGGCCGCCTGGAGGTCCTCAAGATCAAGACAAGAAACATGAAACT CTCCCCCGACATGGACCTGGCGCTGGTCGCGAAGGACACCCACGGGTTTG TCGGCGCCGACATTGCCCAATTGTGCATGGAGGCGGCGTTGCAGTGCATT CGAGAGAAGATGGGGTGAGCTCTTCCCGATTTTTCGCCCTCCCTTTCTCC CCTCCTCCCTTCTTCAACCCCCCTCTCCATTCCAGACCTTGCCTAAACCT CAACTCTCTTGTGACATCGTTTGCGTTGCGCTTTTATCTCCTCCCTACAT CTTTTCCCTCAAATTCTTTCCTCCCACCCGTCCTCCCTCCCTCCCTCCCT CCCTCCCTCCTCCAGCGATATTGACATTGACGACGAGGAGATCGACGCGA AGCTCCTCGACTCCCTCATGATCACCAACGAGCACTTCAGGCACGCTATG TCCGTCTGCAACCCCTCCGCCCTCCGAGAGACCCAAGTGGAGGTGCCTGA TGTGACGTGGGAGGATGTCGGCGGGCTCGAGGACGTGAAGCGGGAGCTGG CCGAGACGATCCAATACCCTGTGGAGTACGCAGCCAAATACGAGAAATTC GGTGCGAACTTGCTTCTTTCCCTCCACTCCCCCCTCCTTCTTTTCCTCTT TCCAGCCCTTCCGTGTGTTTTGGCTCTTGTAGATTCTTCTCCCCCTTTCT AGGAGTGCATGCTAATTTATTACCTGTACCATTTACATCTCCCTTCCTTC CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCTCTCAGGCATG CCCGCCGCCCGTGGTGTCCTTTTCTACGGTCCTCCCGGCTGCGGCAAGAC CCTTCTGGCCAAAGCCGTCGCCAACGAATGTGGCGCCAATTTCATCAGTA TCAAGGGCCCCGAGCTTCTGACAATGTGGTTCGGCGAGTCCGAGGCGAAC GTCCGCGACCTCTTCGATAAGGCCCGTGCTGCCGCACCGTGCATCCTGTT CTTTGACGAGATGGACTCCATCGCCAAGGCCCGAGGCTCCGGCGGGGGAG GAAGCGAAGCCGGCGACCGTGTCATCAATCAAATTTTGACGGAGATCGAC GGCGTGGGTGCCCGGAAGAGCGTCTTTGTTATCGGGGCGACCAACAGACC CGACATCCTCGACAGTGCCATCACGCGCCCTGGGCGTCTCGACCAGCTGG TCTACATTCCTCTTCCTGACTTTGGCTCCCGCCTCTCCATCTTCAACGCG AACCTGCGCAAGTCTCCCGTCGCCCCTGACGTGGATCTAGAGGCAATGAG CGAGGCCACCCAAGGGTTCTCCGGGGCTGATATTTCAGAGATTTGTCAAC GAGCTGCCAAGAACGCAATTCGAGAGAGCATATTTGCAGAGGTGGAGAGG GCGAGGCGGATTGAGGAGGGGTTGGAGGAAGCGAAGGAGGAAGGGGAGGA GGAGGACCCGGTGCCCTTCATTACCAAATTGCACTTCGAGGAGGCGATGG GGAGGGCGAGGAAGAGTGTGAGCGAGGCGGACATTCGAAAGTACGACGCG TTCAATGCGCAAATGAAGGCGGATAGGGGATTTGGGGAGTTTAAGTTTGG AGAGGGGGAGGGGGAGGAGGGGACAGAGGGCGGGGAGGGGGGGAAGGAGG AAGAGGATTTGTATTAATTGAGTCAGGGGGGGAAGTGTGGATGTGTGTGA GGAGGAGGAGGAGAGGTAGGCACACATGAGGGAAAGAGGGAAGAGGATGC GAAGTACAGGGAATGGATAGGGGGAAGAGAGAAGAAGAAGAGAAAGACGG AGAGAGGAAGTCATGAGGCAATGAGACGAAGGTTCTCAGCGAGAGGAGAG AGGAGAGCGGAGGGTGGCGAGCAGAGGAATGAAATGCAGGTCTTTGGCGT GGTGGTCTTGGTCGCTGACTACCTCTATCACCGGAAAAACGGAGGAGTAA GAAGAACAAAGAAAAGAGGGAGGAGGAGGAAGAGACAAGCAGCAGCAACA ACAGACAAAAAGACAGGGAATCGAGAAACAAAAAAGAAAACAAGCCAGAC AGATTTAGACCACAAGCTTGAAGCACACGATTATTCATGCACGCCCATCC CAAATTGACACACAAAAAATATAATGTCGTCATGATACTCTCAATCATTC ACAGTGCACACAAGCCACCCAGGTCACGAGGACTCCTCCTCCCTTCCTCT CTTCTACCTTTCCCTCTCCCCTCGCGGCCCCCAAAATTCCAACACACTCT CCCCCGCCTCCCTTCCCTGAAGCACCTCCACCGTCACCCCCATCCCTGCC TCATTCCCTCCCTCTCTTCCTATTCTATACCCAACCACGGCTGGCGCGGC TCTTGAGCAATAGCGAGAAAACAAGGCCAGAGTGTACCCTCCGACATCAT GCACGACAAGCCAGTCTCCTGACTCAACTTTTGGTAACTTTATGCCGCTT ACAATCACGTCCCCCGCAAAGCACAGAGGCCCAGCCAGATTGTGAAGGCG AGGGGTGCGTGCGTGCACTTGCCCTTCCTCCTTCCCTCCTTCCTTTACTT CGGCCAGGTGGCCATCTTTGTCGTGCACTGTAAATCGATGGTAGAACTTC CCCGGCACGTAGCACTCGCGCAACAACACGTCGGCACCCGCATGCAGAAT TGCCGTTCGCAATCCTGTCGTCCCGCGTCCTCCCTCTTCCTCCCTTTGTC CCTCCCTCCCGTCTTCCTCCTGGTTGTCAAAAGCGTACTCCACCCGGCTG GCAAGCCAGGCAGTTTTCGCCGTAAGGGAGCGACCATACTCCGTCACTAC CCTCACGCAAGGACCACTGCTACTGCTGCCACTGCTGCCATTGCTTCCGT TTCTATTCGAGGAAGAAAGTGGGGGCGGAACGAAAAGAGAAGGAGCCGCC TCCCTCAAAACCTCCACCAGCTGCGCATGAGTAGGCATGGCTTGATTCGA TAGATAATTCGCGGCCAACCCCCCTCCGATATCCAACGTGGTGATCCTTC TCCTTCCCTCCATCTCTGCCCCATTCTTAGAAAGCGATTCCTCTACTTCT TCTGTGAGGGCGATGAGGACCTTAACGCCTTGTGCTAGTTGATCCATCCC GAGTCCTTGCGACCCGACGTGTATGTGGAGGCCAGTCAGCCAGGGGTACT TATGGAAGTAGGAGATGACTTTATGTTTATTGCTCAAGGAAAAATAAGAG GAGGAACAAGGAAAAGAAGAAGAGGAGAAGGAGGAGGTGTCGAGGGTGAG GGGGACACCGAATTTGGATGTGGCAGTGGCGACGCTGAGTTCTTGGATTG TACCCGCGCCGACGAGGGGGTTGATACGCAAGCCGATGGAGGGAGGGGGA AAAGTGGAGGAGGATGTTGCTGAGAGGATGGAGGCAATGCGATCAAGTTC CTCGAGAGTGTTGGCGTTGATGTGAATACCTTTGGACAAGGCGAAGTCCA GCTCTTTGTAGGTCTTGGCGGGGGAGTCAAAGACAATCTTTTCCGGGGGA CAGCCGTGAAAGAGGGCGCTTTCGACCTCTAGAATTGAAGCAGCTTCGAG TCCTAGCCCTGCCCGAATGGCTGCTTGGAGGATGAAGCCCATGGGTGCGG CTTTGATGGCATAGCAGTGGAGGAAATGAAGGGGGAAGGCTTTGACGAGG CTGTCGAACCCCGTATGCAAGGCATCCAAGTCATAGGCAATCACCACGTC TTCCCCTGCGCGGGCCTTGGAGGGCTGCAGGATACCTTGGGCACGCAATG ATTGGAGGACTATTTGCACCTGGCGGGAGTCGTAGGCGGCGGGCGGCATG GTTGATATGCTTTAGGGAGCGGGTTGGGTTGTAGGTCGATTTAGAGGGAG GTCGAGGGAGTAATGGCAGTAGGGTAGCTAAAGAGAGGCTTGCTGGTGGC AGACTTTAGAAAGCGGCTGGTTATCCCTCTGCACGTTGTGTCTGCTGTGT TT
back to top

Coding sequence (CDS) from alignment at chr23:651514..658065-

>NO23G01800.1 ID=NO23G01800.1|Name=NO23G01800.1|organism=Nannochloropsis oceanica|type=CDS|length=3096bp|location=Sequence derived from alignment at chr23:651514..658065- (Nannochloropsis oceanica)
ATGATTTCTATCGTGTCCCTCCCACTATGTCGATGTTTATCTCGAACCCT
TTCTATGCGTTCTTTGGTTTGTTTTTTGCATCATCGCGAAGCACCGCCCC
ACATCCCCTGTTGCTTCAATCAGGGCCGTGATCCTTTACCTTTACCAACC
CAACCCTCTGCCCTCATAGAAACCAAAAACAGGACGGGTCCCAGAGGAGT
AGCAGCTCACGTGTGTACTCCCGACTACTTCACGGCCATGGCGCCCACGG
AGGGAAGAAGACGGCAAGCCACCCTTGCGGCGGCTCCTGCTCCCACTCCC
ATGGCCCCTGGCGGGATGCGACAACGACGACGACGACCCTTATCATCATC
ACTGCGCTTCATCAGCACTTCCAGCCCCCTTATCCTAAACCTGATTACCT
TATTGGGATGCTGCGCCGTGACACTGGCTGCCATCTCTGGCCCCTCTTCC
TTAGGCAGCCAGTTTTTTGGTCTCAAGGCTCGACACAGCGCCATGCAGTG
CGACGACGACACCACCACCCCATTCATGACCACCACTACCAGCACTCCCC
GCTGGCTCCAACTCATCCGGGGCGGAGCCAGTGCCGCCCCCGTCGGGAAA
AAGAAGGGGACGGGAAAGAAGAAGAAAGCTGCCGCGGCAGCAGCGGCGGC
TGCCGAAAAGGTGCCCCCCCCCGCAGTGGCGCCGGAGAAAGAAGAGAAGC
CAGCTATAGTAGAAAATGCTCCGACCCCGCGGAAGGTTAAGAACAGCTTT
ATCGTGGACGAGGCCGTGAATGAAGACCACAGCATGGTAGCCCTCTCGAA
GGATACTATGGCGCGGCTGGACCTGTTCCAAGGGGACTTCGTCATGCTGA
AAGGGAAGAAGAGGAAGGACACAGTCTGCGTGGCTGTACCGGACGACACC
CTCGATGACGCCCATGTCCGCCTGACCAAGACCGTGCGAGGGAACCTGCG
CGTGCACCTGTCGGACGCCATTTCGCTCTCCAAGGTGGAGGACGTCAAGA
CGGGGAAGAAGGTGGTGGTGGTACCTTTCGCCGACACCATCCAGGGCTTG
AAAGGCGACCTTTTTGAGACCTTTGTCGAGCCTTACTTCAAGGAGACGTA
CCGCCCCGTGCGGGTGGGAGACACGTTTCTGGCCCGGGGGGGCATGAGGG
CGGTGGAGTTCAAGGTGCTGAGCGTGGAGGTGGAGGGAGGGAAGGAAGAA
GGGGAGGAGAGTGAGGGGGCGAAATATTGCATCGTGGGGGATGAAACAGA
GGTTGAGATTAGTGAGGAGGCTTTGAATAGAGAGGATGACGAGAGGCTGG
ACGAGCTCGGGTATGACGACATCGGGGGGTGCAAGAAGCAGCTGGCCATG
ATCAGGGAGCTAGTAGAGCTTCCATTGCGACATCCGCAGCTGTTTCGCTC
TGTAGGTATCCCCCCTCCGCGAGGTGTGCTCCTGTATGGCCCTCCCGGGT
CGGGGAAGACCATGATTGCCAAGGCCGTGGCAGCGGAGACGAATGCCTAT
TTCTTCACGATCAACGGGCCCGAGATTATGAGCAAGATGTCGGGCGAGTC
TGAATCCAAGTTACGCAAGGCGTTCGAGGATGCGGAGAAAAACGCGCCTG
CCATTCTCTTTATTGACGAGCTGGATGCCATTGCTCCCAAACGAGACAAA
GCCGGAGGAGAGGTGGAACGGCGCATCGTCTCTCAGATGCTCACCCTCCT
GGATGGGATCAAGCCCTCGTCCAATGTGGTGGTGATGGCAGCCACCAACC
GCCCTAATCAGATCGATCCGGCCCTGCGTCGGTTCGGTCGTTTCGATCGC
GAGCTGGACATTGGCGTCCCTGACGACGAAGGCCGCCTGGAGGTCCTCAA
GATCAAGACAAGAAACATGAAACTCTCCCCCGACATGGACCTGGCGCTGG
TCGCGAAGGACACCCACGGGTTTGTCGGCGCCGACATTGCCCAATTGTGC
ATGGAGGCGGCGTTGCAGTGCATTCGAGAGAAGATGGGCGATATTGACAT
TGACGACGAGGAGATCGACGCGAAGCTCCTCGACTCCCTCATGATCACCA
ACGAGCACTTCAGGCACGCTATGTCCGTCTGCAACCCCTCCGCCCTCCGA
GAGACCCAAGTGGAGGTGCCTGATGTGACGTGGGAGGATGTCGGCGGGCT
CGAGGACGTGAAGCGGGAGCTGGCCGAGACGATCCAATACCCTGTGGAGT
ACGCAGCCAAATACGAGAAATTCGGCATGCCCGCCGCCCGTGGTGTCCTT
TTCTACGGTCCTCCCGGCTGCGGCAAGACCCTTCTGGCCAAAGCCGTCGC
CAACGAATGTGGCGCCAATTTCATCAGTATCAAGGGCCCCGAGCTTCTGA
CAATGTGGTTCGGCGAGTCCGAGGCGAACGTCCGCGACCTCTTCGATAAG
GCCCGTGCTGCCGCACCGTGCATCCTGTTCTTTGACGAGATGGACTCCAT
CGCCAAGGCCCGAGGCTCCGGCGGGGGAGGAAGCGAAGCCGGCGACCGTG
TCATCAATCAAATTTTGACGGAGATCGACGGCGTGGGTGCCCGGAAGAGC
GTCTTTGTTATCGGGGCGACCAACAGACCCGACATCCTCGACAGTGCCAT
CACGCGCCCTGGGCGTCTCGACCAGCTGGTCTACATTCCTCTTCCTGACT
TTGGCTCCCGCCTCTCCATCTTCAACGCGAACCTGCGCAAGTCTCCCGTC
GCCCCTGACGTGGATCTAGAGGCAATGAGCGAGGCCACCCAAGGGTTCTC
CGGGGCTGATATTTCAGAGATTTGTCAACGAGCTGCCAAGAACGCAATTC
GAGAGAGCATATTTGCAGAGGTGGAGAGGGCGAGGCGGATTGAGGAGGGG
TTGGAGGAAGCGAAGGAGGAAGGGGAGGAGGAGGACCCGGTGCCCTTCAT
TACCAAATTGCACTTCGAGGAGGCGATGGGGAGGGCGAGGAAGAGTGTGA
GCGAGGCGGACATTCGAAAGTACGACGCGTTCAATGCGCAAATGAAGGCG
GATAGGGGATTTGGGGAGTTTAAGTTTGGAGAGGGGGAGGGGGAGGAGGG
GACAGAGGGCGGGGAGGGGGGGAAGGAGGAAGAGGATTTGTATTAA
back to top
Synonyms
Publications