NO23G01650.1, NO23G01650.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01650.1
Unique NameNO23G01650.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1580
Alignment locationchr23:609963..611983 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:609963..611983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO23G01650.1 vs.
Match: EWM27795.1 (dipeptidyl anminopeptidase [Nannochloropsis gaditana])

HSP 1 Score: 240.7 bits (613), Expect = 8.100e-60
Identity = 125/248 (50.40%), Postives = 166/248 (66.94%), Query Frame = 0 
Query:  176 HETSGMAGGYKLRSIDNEKDPSAAIKRSQGIYVCGGNVFRLLRELRRRGLLEDVREAVMEGGIPYLGISAGTVLACPTICTSNDMPIVDPGVAAGESLAAAASDIFSTTVASSPFSNPRPSSPSSLPLPPSSFSALSALGLIDFQINAHFFGGDFYSQDPATGKFQVHFGMNRVERIREFLEDVSDDAPVPVVGLAEGCMLKCEGGKIELLGESFSPPGSPMTIFRKHFTPLEVKDVKGKDLAPLIRG 424
            H  SGM GGY+L+ +  E DP+ AI+ +Q IYVCGGNVFRLLRELRRR LL+ +++AV+   +PY+GISAGTVLACPT+CTSNDMP+V      G+         +ST+  SS                      L ALGL+ FQINAH++GG+FYS++P TG ++ H GM R ERI+EFLE+ S+ APVPV+GL EG +L+CEG KI + G   S  GS +TIF+K  +PLEV+ +  +D+A L+ G
Sbjct:    2 HVDSGMTGGYRLQPLHKEDDPAVAIRGAQAIYVCGGNVFRLLRELRRRNLLQPLQDAVLSHRVPYVGISAGTVLACPTVCTSNDMPVV----DPGD---------YSTSAGSS----------------------LQALGLVKFQINAHYYGGEFYSREPGTGAYEAHAGMRREERIQEFLEETSEAAPVPVLGLPEGYLLRCEGEKIGVRGGP-STRGSAVTIFKKDQSPLEVEGLPTEDIAALVWG 213
The following BLAST results are available for this feature:
BLAST of NO23G01650.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27795.18.100e-6050.40dipeptidyl anminopeptidase [Nannochloropsis gadita... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01650NO23G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01650.1NO23G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01650.1.cds1NO23G01650.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01650.1.cds2NO23G01650.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01650.1.cds3NO23G01650.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01650.1 ID=NO23G01650.1|Name=NO23G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=1580bp
ACACAAGTCGATCCCCATCCCATATACACACTCAACGCAGGGTAACGCAG
CCGCATATACAGTGGCTGCGGTAGAAGGAGAGTCTTTATGCCGAGACGGA
GCACTTCTTGTCCTTGCTGGCAGAGCATCTGCCTGTTCTTTTTCCTTTTT
TGCAGAAACGTCATCGCTGCCTTCGTCCTGCCTTTCTCCAGCAGCAGCAG
CAGCAGCGCTATCAACACATGTGGCCGCCAAGCCAAATCTTACCGGGCAT
CGCAACCACCAGCAGTATTAGTTAAATGCAATGTACAGTCAACGGCAGCA
GTAGGAATTGATCGTGGGGCATGGTTAAGACGCCCACGATGTCTCGCTCC
TCTATCTGCCGTGTCGGACCCCGTGGAACAACAACAACTCAAGGAGATTC
CGCATGGGATCGCCCGCAAGCAAAATACAGTGCCCTCCTCCTCCCCTCCC
TTCGATTGCTCTCCTCGCCTCCTCCTCGCTAGCGGAGGTTTTCGCGATGA
AGCGCGCATTCAATTTCTATCTGACGAGATTCGGAATTTCTTCGGGGAGG
GCGTTTCGGAACTCCTCTTCATCCCCTTTGGCGCGAAAGACCATGTTGCC
TGCATGAATACGCACGAGACGTCGGGTATGGCAGGCGGGTACAAATTGAG
GTCGATTGATAATGAAAAGGATCCTTCGGCAGCGATTAAGCGATCGCAAG
GCATTTATGTCTGCGGTGGGAATGTCTTCCGCCTCCTCCGAGAGCTGCGC
CGACGCGGGTTGCTCGAGGATGTGCGGGAGGCAGTGATGGAGGGAGGGAT
ACCGTACCTGGGCATCTCGGCGGGCACTGTCTTGGCCTGTCCCACGATCT
GTACCAGCAACGACATGCCCATCGTCGATCCGGGTGTTGCAGCTGGAGAG
TCTCTTGCTGCTGCTGCCTCCGATATTTTTTCTACTACCGTTGCTTCTTC
TCCTTTTTCCAATCCCCGTCCTTCTTCTCCTTCTTCTCTTCCTCTTCCTC
CTTCTTCTTTCTCTGCCCTTAGCGCTCTGGGTCTGATCGATTTCCAAATC
AACGCTCACTTTTTCGGTGGTGATTTCTACAGCCAAGACCCAGCCACGGG
CAAGTTCCAAGTCCACTTCGGCATGAACCGCGTTGAACGCATCAGAGAAT
TCCTTGAAGACGTGAGCGACGACGCCCCTGTTCCAGTGGTGGGGCTGGCG
GAAGGTTGTATGCTGAAATGCGAGGGCGGGAAAATCGAATTGCTTGGGGA
AAGTTTCAGTCCACCGGGGAGTCCCATGACAATTTTTAGGAAGCACTTCA
CGCCATTGGAGGTGAAGGACGTTAAAGGCAAAGATCTAGCGCCCTTGATT
CGAGGATAGTACGTGTATCTAAAGCCTAAGAATTTGTTTTGTTTTCAGTC
GAAAAGGTGAAGGGGTGGGAGGTAGGGAGATAATGTGGGAGGGAGGAAAG
AGGGCCTACTCTGACATGTGTTCAAATCCATGAACGACAAACCCATCACT
GTATGTATCTTAAAAGATGGAGATTGACAAACGAATGGATAGTATATTAA
CAAAAAAAGAAATCGATCCCGCCTGCCTCG
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protein sequence of NO23G01650.1

>NO23G01650.1-protein ID=NO23G01650.1-protein|Name=NO23G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MPRRSTSCPCWQSICLFFFLFCRNVIAAFVLPFSSSSSSSAINTCGRQAK
SYRASQPPAVLVKCNVQSTAAVGIDRGAWLRRPRCLAPLSAVSDPVEQQQ
LKEIPHGIARKQNTVPSSSPPFDCSPRLLLASGGFRDEARIQFLSDEIRN
FFGEGVSELLFIPFGAKDHVACMNTHETSGMAGGYKLRSIDNEKDPSAAI
KRSQGIYVCGGNVFRLLRELRRRGLLEDVREAVMEGGIPYLGISAGTVLA
CPTICTSNDMPIVDPGVAAGESLAAAASDIFSTTVASSPFSNPRPSSPSS
LPLPPSSFSALSALGLIDFQINAHFFGGDFYSQDPATGKFQVHFGMNRVE
RIREFLEDVSDDAPVPVVGLAEGCMLKCEGGKIELLGESFSPPGSPMTIF
RKHFTPLEVKDVKGKDLAPLIRG*
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mRNA from alignment at chr23:609963..611983-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01650.1 ID=NO23G01650.1|Name=NO23G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2021bp|location=Sequence derived from alignment at chr23:609963..611983- (Nannochloropsis oceanica)
ACACAAGTCGATCCCCATCCCATATACACACTCAACGCAGGGTAACGCAG
CCGCATATACAGTGGCTGCGGTAGAAGGAGAGTCTTTATGCCGAGACGGA
GCACTTCTTGTCCTTGCTGGCAGAGCATCTGCCTGTTCTTTTTCCTTTTT
TGCAGAAACGTCATCGCTGCCTTCGTCCTGCCTTTCTCCAGCAGCAGCAG
CAGCAGCGCTATCAACACATGTGGCCGCCAAGCCAAATCTTACCGGGCAT
CGCAACCACCAGCAGTATTAGTTAAATGCAATGTACAGTCAACGGCAGCA
GTAGGAATTGATCGTGGGGCATGGTTAAGACGCCCACGATGTCTCGCTCC
TCTATCTGCCGTGTCGGACCCCGTGGAACAACAACAACTCAAGGAGATTC
CGCATGGGGTAAGTGCACTCAAAAAAATGGCTGTAAGAAGGGAGGAGAAA
GGATGGATTTCAGACATAGTGTCTGAACAGCAAAGCTCAGCTCTGCCTTA
ACAAAAACTGGGAAAGGGATGATGTTGACTCTTTTCCTCCACTCATGCCT
GCGCACAGTCATCTTTCACAACCACCCTCACTCTGTCACTAGTTACTTTC
TCTGGAATGTACTGTGTCCTTGTTTGAAGCATAAGATTCTTGTCCATATA
CGCCGTCACCGTCGACGCCAACCTATAGTATCTCTCATTCCTCTGCCTTC
CCCTCTGTCCTCCCCCTCCACAGATCGCCCGCAAGCAAAATACAGTGCCC
TCCTCCTCCCCTCCCTTCGATTGCTCTCCTCGCCTCCTCCTCGCTAGCGG
AGGTTTTCGCGATGAAGCGCGCATTCAATTTCTATCTGACGAGATTCGGA
ATTTCTTCGGGGAGGGCGTTTCGGAACTCCTCTTCATCCCCTTTGGCGCG
AAAGACCATGTTGCCTGCATGAATACGCACGAGACGTCGGGTATGGCAGG
CGGGTACAAATTGAGGTCGATTGATAATGAAAAGGATCCTTCGGCAGCGA
TTAAGCGATCGCAAGGTATGGCGGGAGGGAGGGCAGCTAGAGAAGATGAT
GGCATCGTCTCTTCGGCACTCCAAGAGCTTCTATCGCCCAGCCATCGATC
GCTCACGCTTCCAACTCTACCCTTCCCCCTACCCCCCCAAGGCATTTATG
TCTGCGGTGGGAATGTCTTCCGCCTCCTCCGAGAGCTGCGCCGACGCGGG
TTGCTCGAGGATGTGCGGGAGGCAGTGATGGAGGGAGGGATACCGTACCT
GGGCATCTCGGCGGGCACTGTCTTGGCCTGTCCCACGATCTGTACCAGCA
ACGACATGCCCATCGTCGATCCGGGTGTTGCAGCTGGAGAGTCTCTTGCT
GCTGCTGCCTCCGATATTTTTTCTACTACCGTTGCTTCTTCTCCTTTTTC
CAATCCCCGTCCTTCTTCTCCTTCTTCTCTTCCTCTTCCTCCTTCTTCTT
TCTCTGCCCTTAGCGCTCTGGGTCTGATCGATTTCCAAATCAACGCTCAC
TTTTTCGGTGGTGATTTCTACAGCCAAGACCCAGCCACGGGCAAGTTCCA
AGTCCACTTCGGCATGAACCGCGTTGAACGCATCAGAGAATTCCTTGAAG
ACGTGAGCGACGACGCCCCTGTTCCAGTGGTGGGGCTGGCGGAAGGTTGT
ATGCTGAAATGCGAGGGCGGGAAAATCGAATTGCTTGGGGAAAGTTTCAG
TCCACCGGGGAGTCCCATGACAATTTTTAGGAAGCACTTCACGCCATTGG
AGGTGAAGGACGTTAAAGGCAAAGATCTAGCGCCCTTGATTCGAGGATAG
TACGTGTATCTAAAGCCTAAGAATTTGTTTTGTTTTCAGTCGAAAAGGTG
AAGGGGTGGGAGGTAGGGAGATAATGTGGGAGGGAGGAAAGAGGGCCTAC
TCTGACATGTGTTCAAATCCATGAACGACAAACCCATCACTGTATGTATC
TTAAAAGATGGAGATTGACAAACGAATGGATAGTATATTAACAAAAAAAG
AAATCGATCCCGCCTGCCTCG
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Coding sequence (CDS) from alignment at chr23:609963..611983-

>NO23G01650.1 ID=NO23G01650.1|Name=NO23G01650.1|organism=Nannochloropsis oceanica|type=CDS|length=1272bp|location=Sequence derived from alignment at chr23:609963..611983- (Nannochloropsis oceanica)
ATGCCGAGACGGAGCACTTCTTGTCCTTGCTGGCAGAGCATCTGCCTGTT
CTTTTTCCTTTTTTGCAGAAACGTCATCGCTGCCTTCGTCCTGCCTTTCT
CCAGCAGCAGCAGCAGCAGCGCTATCAACACATGTGGCCGCCAAGCCAAA
TCTTACCGGGCATCGCAACCACCAGCAGTATTAGTTAAATGCAATGTACA
GTCAACGGCAGCAGTAGGAATTGATCGTGGGGCATGGTTAAGACGCCCAC
GATGTCTCGCTCCTCTATCTGCCGTGTCGGACCCCGTGGAACAACAACAA
CTCAAGGAGATTCCGCATGGGATCGCCCGCAAGCAAAATACAGTGCCCTC
CTCCTCCCCTCCCTTCGATTGCTCTCCTCGCCTCCTCCTCGCTAGCGGAG
GTTTTCGCGATGAAGCGCGCATTCAATTTCTATCTGACGAGATTCGGAAT
TTCTTCGGGGAGGGCGTTTCGGAACTCCTCTTCATCCCCTTTGGCGCGAA
AGACCATGTTGCCTGCATGAATACGCACGAGACGTCGGGTATGGCAGGCG
GGTACAAATTGAGGTCGATTGATAATGAAAAGGATCCTTCGGCAGCGATT
AAGCGATCGCAAGGCATTTATGTCTGCGGTGGGAATGTCTTCCGCCTCCT
CCGAGAGCTGCGCCGACGCGGGTTGCTCGAGGATGTGCGGGAGGCAGTGA
TGGAGGGAGGGATACCGTACCTGGGCATCTCGGCGGGCACTGTCTTGGCC
TGTCCCACGATCTGTACCAGCAACGACATGCCCATCGTCGATCCGGGTGT
TGCAGCTGGAGAGTCTCTTGCTGCTGCTGCCTCCGATATTTTTTCTACTA
CCGTTGCTTCTTCTCCTTTTTCCAATCCCCGTCCTTCTTCTCCTTCTTCT
CTTCCTCTTCCTCCTTCTTCTTTCTCTGCCCTTAGCGCTCTGGGTCTGAT
CGATTTCCAAATCAACGCTCACTTTTTCGGTGGTGATTTCTACAGCCAAG
ACCCAGCCACGGGCAAGTTCCAAGTCCACTTCGGCATGAACCGCGTTGAA
CGCATCAGAGAATTCCTTGAAGACGTGAGCGACGACGCCCCTGTTCCAGT
GGTGGGGCTGGCGGAAGGTTGTATGCTGAAATGCGAGGGCGGGAAAATCG
AATTGCTTGGGGAAAGTTTCAGTCCACCGGGGAGTCCCATGACAATTTTT
AGGAAGCACTTCACGCCATTGGAGGTGAAGGACGTTAAAGGCAAAGATCT
AGCGCCCTTGATTCGAGGATAG
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Synonyms
Publications