NO23G01520.1, NO23G01520.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO23G01520.1
Unique Name	NO23G01520.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3903
Alignment location	chr23:558677..564432 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr23	genome	chr23:558677..564432 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO23G01520.1 vs.
Match: XP_005854412.1 (svop protein [Nannochloropsis gaditana CCMP526]; EKU21948.1 svop protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 349.4 bits (895), Expect = 2.300e-92
Identity = 220/382 (57.59%), Postives = 267/382 (69.90%), Query Frame = 0

Query:  239 VASTPLLVATLAIFCLPESPRWLLEEGQTEKAWQVLVTAARWNGRKDLHSDLINLR---CTETPAEGVREERRKASMAATATAIVVEEGREQGAEEEPIPSAAPAPAAAAQDICPLEPHHHH--------PSSSPLSS-SSFLSTLPLLLSAALRATTLWLWVIWFSFGLLYYGIIVLSASIFSSEGEAGTEHGELFDYPTLMFAAASEAVGVLLAIALLERCGRKNTQVSTYLLSAIGAALLSLFFALHLPARPSLLIAAVICRIGAMAASSTTWVATPEAYPTAVRSTGHSVASAVARVGGILAPQILRGDAADGWVPGIILTVISLIAGAAALMLPETGGKSLGTLDEKKEVEMEQQQQQQQQQQQQQQQQPQQQPQQQ 609
            +A+ PLL+ + A   LPES RWLLEEG+TE AW+VL+ AA+WNG KDL S L +LR        AEG RE  R+            E GRE GAE+E      PA        CPL  HHHH        P+  P S+ ++F  TLPLLL   LRATTLWLW+IWFSFGL YYGII+L AS+F+ EG    E   LFDYP L++AAASEAVGVLLA+ALLERCGRKNTQVSTYLL+A+GA LL+LF    LPA P LL AA+ICRIGAMAASS TWVATPE+YPTAVRSTGHSVASAVARVG ILAP+I+RG A + WVPG ILT ++++A  AA+MLPETGGK LG +++ KEVEME++  +   + + + Q  +   Q++
Sbjct:    1 MATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGR---------EGGREGGAEDEAARQVQPA--------CPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGG---EDDALFDYPALLYAAASEAVGVLLALALLERCGRKNTQVSTYLLAALGAFLLALFSGFRLPAHPHLLTAAMICRIGAMAASSATWVATPESYPTAVRSTGHSVASAVARVGAILAPEIIRGGAINNWVPGGILTAVTVVAAMAAMMLPETGGKGLGAMNDSKEVEMEERALEDSMEGRPESQGGRAAAQKE 362

The following BLAST results are available for this feature:

BLAST of NO23G01520.1 vs.

BLAST of NO23G01520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854412.1	2.300e-92	57.59	svop protein [Nannochloropsis gaditana CCMP526]; E...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO23G01520	NO23G01520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO23G01520.1	NO23G01520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO23G01520.1.cds1	NO23G01520.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds2	NO23G01520.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds3	NO23G01520.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds4	NO23G01520.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds5	NO23G01520.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds6	NO23G01520.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds7	NO23G01520.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds8	NO23G01520.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01520.1.cds9	NO23G01520.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr23:558677..564432-
coding sequence from alignment at chr23:558677..564432-

mRNA sequence

>NO23G01520.1 ID=NO23G01520.1|Name=NO23G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=3903bp
CTGCTACTTATGAAAGCTTTTTTTTTCTCCTTTCTGTGGAGGTTGAGGGA
TTTGGAGTGCTCAGTAGCGAGGATTCTCGTGCGGGCCCACCTTTGGGTTC
TCCTGCATAGTTCGAAATACCATTCAAAAATTGTTGTCTTCATCCAGGCG
TGCTCTTTGACAAGCTTCACACCGCCTCAATCATCCTAGAGGGGCGAGCC
CCTCCGAGATTCGTCTCTCCTCTGGATGTTCTCTGCCTCCCCCGAGGCCT
CCTCTAAAAATAATGGGCCTTTCGTTTGGTCAAGCCCGGTGCACTTGATC
GGGCGCGCTGACCTACGATTTGTTTCCAACGTCACTCGTCTTGATCCTAC
CCTTGTTCAATCTACGCACGCACCAATCACTGTCAGTACCAAAGTACCGC
CCATTGACAAAAGAAGTGCGACGGCCTCATCCTTTAGACAGCGACGCCAC
CGGATGAAAATGTTCCGTATCAAAAATCAAAAATTAATGACTTGTACCGA
GCTCAATCAAGGAAGCAAGCGCACACACATGCATAGGCTGCGCTCTCACT
TTGTCCATCATACACACGCAAGGCATGTGCATAGATGTTGCGTGTATATC
ACGTCCTAATCGTCCCGTGAAAACCCTCCAGCTTTGCTTCTCCCACCCTT
AAGAGGCTCACCCTACCTTCGCATTCAACGTTCGTCGTCTGTCATTGCAG
GAACACATTCCCATTCCCGTTCACCCACCACGCAGCTTTCCCTAGCACTC
ACACCTCGAGATAAATACGCAGGTTTTGTGTGTCGTTGCCTCTGCCTTAC
TACTTCTGGTTTGCCTTGGCCTCCGTGCGTGGAGAGAGCAGGGAGTGTCC
AGCACTGATAACCGTCCCACGTGCAAGCACTCATAGTTACACCTTACGCA
TCTCTTCACAGCCGCAGACACAGCAGAAAAGAGACTCTTCTTTTGCTCCC
TCCACGCGGCTCTACCGCGGAGTGTGACGGACGCCGTCGTGGACAGCTAG
GGCTGCCCCCCCTTCACTGCCTGCTTCCTCCCCATCAAGCTCTCGCCCCA
CCCGCCTTTGATGGACGGTGGAGCCGAAAAACCAACATTGTGGGCCTTAT
CTCAGTCCCTCGCATCCTCTCTAAGTTCCTCTTCCTCCCCCTTGACCGCA
TTCTCGACCTCGTCTTCCGCGACTGCCGAAAAGGACCGGCCGTCGCAGCA
ACAGCAGCAGCAGGAGTCCTATACTGGCATGGAGGAGAAACGTACGTGGA
CCATCGATGAACTCGAGGATCTTATTGGCCTTGGGCCCTTTCAGTTCTTC
CTCCTCTTAATTGCCGGCTTGGGCTTCGCCGCGGACTGCATGGAGGTGAC
GTTGATGAGTTTTATGGGCAATGGGGTCGGGCATGAGTGGGGCCTGAGCA
CTCACCGAACGCTTGCCTGGCTGGGTTTTGCGGTGTTTGGTGGCGAGTTC
GTCGGCTGTCTCATCTGGGGGCCGGTCTCGGACAGATGGGGGCGGCAAAA
GGCCTACCTGGCGTCCTGCATTATGATGCTCGTCTTCTCCATCGCCAGCG
CCCTCTCTCCTTCCTTTCCCTTTCTCCTCGTCACGCGCGCCCTGGTCGGC
TTTGGAATTGGCGGTCTCTCGGTGCCTTTCGACTTGCTCTGCGAAGTCAC
ACCTACCAAATACCGAGGCACCATGCTACTGATGATGCAGATGTTTTGGG
TGTTGGGCTCGGTGGTTGTGGTGGGCATGGCCTGGGGAACGCTCGAGGAA
CACGGCTGGCGGTACCTAACACTCGTGGCCTCGACCCCGCTGCTCGTTGC
CACTCTGGCCATCTTCTGCCTCCCCGAGTCCCCTCGCTGGTTACTGGAGG
AAGGGCAAACGGAAAAGGCGTGGCAAGTATTGGTAACGGCCGCCCGTTGG
AACGGTCGAAAGGATCTGCACAGCGATTTGATCAATTTGAGGTGCACCGA
GACCCCTGCCGAGGGAGTGAGGGAGGAAAGGCGAAAGGCGTCCATGGCAG
CCACGGCAACGGCCATAGTGGTGGAGGAGGGGAGGGAGCAGGGAGCGGAG
GAAGAGCCGATACCTTCCGCAGCACCAGCACCAGCAGCAGCAGCCCAGGA
CATCTGTCCCCTTGAGCCCCACCACCACCATCCTTCCTCCTCCCCGCTCT
CTTCCTCCTCTTTTCTGTCCACCCTCCCCCTCCTTCTCAGCGCCGCCCTG
CGCGCCACTACCCTCTGGCTGTGGGTCATTTGGTTCTCCTTTGGCCTTTT
GTATTATGGCATCATCGTCCTCTCGGCCTCCATCTTCTCCTCGGAGGGGG
AGGCAGGCACGGAGCATGGAGAGCTGTTTGACTACCCCACACTCATGTTT
GCGGCGGCTTCGGAGGCCGTGGGAGTCCTTTTAGCTATTGCCCTCCTCGA
GCGGTGTGGGCGCAAGAACACGCAAGTCTCCACCTACCTCCTGTCGGCCA
TTGGTGCCGCCCTCCTCTCCCTCTTCTTTGCTCTCCACCTCCCAGCTCGC
CCTTCCCTCCTCATCGCCGCGGTCATTTGCCGTATTGGTGCCATGGCTGC
CTCGTCCACGACCTGGGTCGCGACGCCTGAAGCCTACCCCACTGCCGTCC
GCTCCACAGGCCATTCGGTGGCGTCGGCGGTGGCGAGGGTGGGCGGTATC
CTTGCCCCGCAGATCCTGCGAGGAGACGCAGCAGATGGATGGGTGCCGGG
TATCATTTTGACGGTCATTTCTCTCATTGCGGGCGCCGCCGCGCTGATGC
TGCCGGAAACTGGAGGCAAAAGTCTAGGGACGTTGGACGAGAAGAAGGAG
GTAGAGATGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCCGCAGCAGCAGCCGCAGCAGCAGGAGTAATAGCGGCGAG
AGTTGCAGGAGTAGCGGCAGGATGGAGGTGAAGGACTAGGCGTACAACGG
AGGCGGATGAGGAGAAAGGAAGCGTCGCAGGGCGCGGTAATGTCCATGGA
GGACGGGGAGGGAAGCCTAGGAGAGAGAGGATGAGGTCTAAGAGGAGGGG
GAGGAAGGGAGGGAGGAATGGGACTGAGGAGCGGGAGCTGTATCAAATTG
TGGAGGCTTTATTGGTCGTCGTGTGGGTGAGTCGAGTTTCAGCAGCTTCC
ATTTACATCAGGAGCACCCTCACCACCGAGAGTGAGTAGCAGCACAGTTA
GAATAGTGACTTTGCAGCAGGCCTACCAACACCATCAGTATTGAAGCCCC
CCCCCGCGTATAAGCAGCCACTCAAGTAAACAGAAGGCAACAGATTCTTA
TTAGATGGTCCGATCTCACTCACCACATATTAAAATCACGCTGAACCATT
TATGGGCCAGAAACAGAGAAAATTAATAACAATTTTTAGTAAAATTAAGG
AAAGAGAACACGATTGATTTGTGTTGCACGTGCATGCCGGCTCCGGAAGG
TACGTAAGGAAAAAGAAATAATGTAAAGCGAGTCGTGGATCACGCTCCAG
TCTTTTTGGGGGGGGCTGTATGTGTTTTTTTCTGTTTATTTCTTCTATTT
TTTTTCTTGGTGCTGATTTTAGGCACGCTGCATGCTCCCGCTGCTCTCTC
TATCTCTTCTCCCCGACGTCACAACAAGGTATGCAGGGGCTTGCGTTCCT
ATTTAGTATTTTATTAAAGAGGACTTGTCAAATTGACTTCTAAAATATTT
TCTTTTCCGCTCCTCTGTACGTCCCCACGGTGATATTCCTACGACGCTGG
GGCCCAAAAACACCTTTAAGTGTGGATGTGGGAATGTCCATGTGCGGTTG
TAGGAGTATGTGTGGGGTGTATGTGGGTGTATGTATTTGGACTATACAGA
AAGTTATGTAAGTTTTTTGCATAAAGATATATATATATATATGGCATAAA
GAC

protein sequence of NO23G01520.1

>NO23G01520.1-protein ID=NO23G01520.1-protein|Name=NO23G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=610bp
MDGGAEKPTLWALSQSLASSLSSSSSPLTAFSTSSSATAEKDRPSQQQQQ
QESYTGMEEKRTWTIDELEDLIGLGPFQFFLLLIAGLGFAADCMEVTLMS
FMGNGVGHEWGLSTHRTLAWLGFAVFGGEFVGCLIWGPVSDRWGRQKAYL
ASCIMMLVFSIASALSPSFPFLLVTRALVGFGIGGLSVPFDLLCEVTPTK
YRGTMLLMMQMFWVLGSVVVVGMAWGTLEEHGWRYLTLVASTPLLVATLA
IFCLPESPRWLLEEGQTEKAWQVLVTAARWNGRKDLHSDLINLRCTETPA
EGVREERRKASMAATATAIVVEEGREQGAEEEPIPSAAPAPAAAAQDICP
LEPHHHHPSSSPLSSSSFLSTLPLLLSAALRATTLWLWVIWFSFGLLYYG
IIVLSASIFSSEGEAGTEHGELFDYPTLMFAAASEAVGVLLAIALLERCG
RKNTQVSTYLLSAIGAALLSLFFALHLPARPSLLIAAVICRIGAMAASST
TWVATPEAYPTAVRSTGHSVASAVARVGGILAPQILRGDAADGWVPGIIL
TVISLIAGAAALMLPETGGKSLGTLDEKKEVEMEQQQQQQQQQQQQQQQQ
PQQQPQQQE*

mRNA from alignment at chr23:558677..564432-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO23G01520.1 ID=NO23G01520.1|Name=NO23G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=5756bp|location=Sequence derived from alignment at chr23:558677..564432- (Nannochloropsis oceanica)
CTGCTACTTATGAAAGCTTTTTTTTTCTCCTTTCTGTGGAGGTTGAGGGA
TTTGGAGTGCTCAGTAGCGAGGATTCTCGTGCGGGCCCACCTTTGGGTTC
TCCTGCATAGTTCGAAATACCATTCAAAAATTGTTGTCTTCATCCAGGCG
TGCTCTTTGACAAGCTTCACACCGCCTCAATCATCCTAGAGGGGCGAGCC
CCTCCGAGATTCGTCTCTCCTCTGGATGTTCTCTGCCTCCCCCGAGGCCT
CCTCTAAAAATAATGGGCCTTTCGTTTGGTCAAGCCCGGTGCACTTGATC
GGGCGCGCTGACCTACGATTTGTTTCCAACGTCACTCGTCTTGATCCTAC
CCTTGTTCAATCTACGCACGCACCAATCACTGTCAGTACCAAAGTACCGC
CCATTGACAAAAGAAGTGCGACGGCCTCATCCTTTAGACAGCGACGCCAC
CGGATGAAAATGTTCCGTATCAAAAATCAAAAATTAATGACTTGTACCGA
GCTCAATCAAGGAAGCAAGCGCACACACATGCATAGGCTGCGCTCTCACT
TTGTCCATCATACACACGCAAGGCATGTGCATAGATGTTGCGTGTATATC
ACGTCCTAATCGTCCCGTGAAAACCCTCCAGCTTTGCTTCTCCCACCCTT
AAGAGGCTCACCCTACCTTCGCATTCAACGTTCGTCGTCTGTCATTGCAG
GAACACATTCCCATTCCCGTTCACCCACCACGCAGCTTTCCCTAGCACTC
ACACCTCGAGATAAATACGCAGGTTTTGTGTGTCGTTGCCTCTGCCTTAC
TACTTCTGGTTTGCCTTGGCCTCCGTGCGTGGAGAGAGCAGGGAGTGTCC
AGCACTGATAACCGTCCCACGTGCAAGCACTCATAGTTACACCTTACGCA
TCTCTTCACAGCCGCAGACACAGCAGAAAAGAGACTCTTCTTTTGCTCCC
TCCACGCGGCTCTACCGCGGAGTGTGACGGACGCCGTCGTGGACAGCTAG
GGCTGCCCCCCCTTCACTGCCTGCTTCCTCCCCATCAAGCTCTCGCCCCA
CCCGCCTTTGATGGACGGTGGAGCCGAAAAACCAACATTGTGGGCCTTAT
CTCAGTCCCTCGCATCCTCTCTAAGTTCCTCTTCCTCCCCCTTGACCGCA
TTCTCGACCTCGTCTTCCGCGACTGCCGAAAAGGACCGGCCGTCGCAGCA
ACAGCAGCAGCAGGAGTCCTATACTGGCATGGAGGAGAAACGTACGTGGA
CCATCGATGAACTCGAGGTAAGTGATTTGGAGGGTGGATAATCTTGTAGG
CAGCCAGAAAATTGTTCTGTTTCTGCATCCCTTACCCCCCCCGTGATCCT
TGTCGGCGTCTTGCGAAGTGCCAGGATAAATTAAGGACAGATCCCTTCCT
GCTTACCTCCTCCTTCCTTCCCTCACTCCCTCCCTCTCTCCCTCCTCCTC
TCTCTCCCTTGTTCGTCCTCTATCCTAGGAGGGTTTAATGGCCTCGATAA
ATCTCTTCCGATGGGTTGTGGCTGGCTAAGGCTTTGCCGCGGTTGGCTGT
ACGGAAGTCACACTCACTCTCCTTCCTTCCCCCCCTCCCCTCTGCCCCCA
CCCGCCTTTTCCACCTCTCGTCCCTTTCCATGACAGGATCTTATTGGCCT
TGGGCCCTTTCAGTTCTTCCTCCTCTTAATTGCCGGCTTGGGCTTCGCCG
CGGACTGCATGGAGGTGACGTTGATGAGTTTTATGGGCAATGGGGTCGGG
CATGAGTGGGGCCTGAGCACTCACCGAAGTAAGGGGAGGGAGGGAGGGAG
GGAAGGAAGGAAGAAGGGACGGAGAGAGGGAAGGAAGGAGGGAGGGAAGG
GAGACAGCCATGCGTCCGTTATTAAATTTCATTCCTCCATTTTATGAACG
AACCCCCCCTCCTCTTTTCACTCTTCCCTCACTCTCTCCCTCCTCCCGCA
CCCCTTCTTGCCTCGTTCCCTCCCTTCCTCGCAGCGCTTGCCTGGCTGGG
TTTTGCGGTGTTTGGTGGCGAGTTCGTCGGCTGTCTCATCTGGGGGCCGG
TCTCGGACAGATGGGGGCGGCAAAAGGTGAAGCTTTTCCCCCTCCCCCCC
TCCCTCCCTCCCTCCCTCCCTCGTCCTTCCTACTTTTCTGGACTGCTCGT
TTTCAGACATTTCAAAAATCTCAGACAAATGGGGTACATATGGAAGATCC
TCCTCCCTTCCTCCCTCCTTCCCTTTCTCCCTCCTTCTCCCCCTGCGTAC
GCCTCACATCCTTCGAAACGTGTTTTCCCCCTCCTCCCTCCTTCCCTCCC
TTCCTCCCCCCTTCCCCCCTCCACAGGCCTACCTGGCGTCCTGCATTATG
ATGCTCGTCTTCTCCATCGCCAGCGCCCTCTCTCCTTCCTTTCCCTTTCT
CCTCGTCACGCGCGCCCTGGTCGGCTTTGGAATTGGCGGTCTCTCGGTGC
CTTTCGACTTGCTCTGCGAAGTCACACCTACCAAATACCGAGGTAAGCAC
CTATTTTATCTACCCCCTTCCCTCCTCATCACCCGCTCCCCCGGCCGGCA
TATGTGTGTGTATTCCTCGTGTCGTGCTCTGTGACTTCTACTGCTGCCAA
CGCACATGAGGTGGGTGCTGAGCGTCGTCATGCCACACGTCCGCTTACCC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCCTCCCAGGCACCATGC
TACTGATGATGCAGATGTTTTGGGTGTTGGGCTCGGTGGTTGTGGTGGGC
ATGGCCTGGGGAACGCTCGAGGAACACGGCTGGCGGTACCTAACACGTAC
GTACTTGCTTTTGTTTCGCTTCCCTTCCTCCCTCCTTCCCTCCCTCCCTC
CCTCCCTCGTCCACGCCTTGTGCTCCCCCCTTTTTGAAAGACGACGTTTC
CCCCTCCACCATCCCCGTTCCCACCCTCCCTCCTTCCCTCCCTCAGTCGT
GGCCTCGACCCCGCTGCTCGTTGCCACTCTGGCCATCTTCTGCCTCCCCG
AGTCCCCTCGCTGGTTACTGGAGGAAGGGCAAACGGAAAAGGCGTGGCAA
GTATTGGTAACGGCCGCCCGTTGGAACGGTCGAAAGGATCTGCACAGCGA
TTTGATCAATTTGAGGTGCACCGAGACCCCTGCCGAGGGAGTGAGGGAGG
AAAGGCGAAAGGCGTCCATGGCAGCCACGGCAACGGCCATAGTGGTGGAG
GAGGGGAGGGAGCAGGGAGCGGAGGAAGAGCCGATACCTTCCGCAGCACC
AGCACCAGCAGCAGCAGCCCAGGACATCTGTCCCCTTGAGCCCCACCACC
ACCATCCTTCCTCCTCCCCGCTCTCTTCCTCCTCTTTTCTGTCCACCCTC
CCCCTCCTTCTCAGCGCCGCCCTGCGCGCCACTACCCTCTGGCTGTGGGT
CATTTGGTTCTCCTTTGGCCTTTTGTATTATGGCATCATCGTCCTCTCGG
CCTCCATCTTCTCCTCGGAGGGGGAGGCAGGCACGGAGCATGGAGAGCTG
TTTGACTACCCCACACTCATGTTTGCGGCGGCTTCGGAGGTAGGTACAGA
GAGGAGAGGGAGGGAGGCGCTGGGAGGTTTTGCAGTGGGTAATCCATGAG
GCGGAAGGAGGAAGGTGGGGGTAGGTGTAATCCACGAGGAGGAAAGGGAG
GAAGGGAAGAAAACGGGCAGAGGTGGGGGGGGGGGGGGGCGGTCGGTCAG
CATATAGGTTATTCTTTTTTATTTATCGATTTATTTATTTATATGCTCGT
GCAATTATTTATGTATGTATTCAGTGGTGCATTTAATCGAGTCGTGTCAC
TCATTGAGACGTTCACGTTCGTCTCCCCCCCCCCTCCCCCTCCTCTTACC
CCAGGCCGTGGGAGTCCTTTTAGCTATTGCCCTCCTCGAGCGGTGTGGGC
GCAAGAACACGCAAGTCTCCACCTACCTCCTGTCGGCCATTGGTGCCGCC
CTCCTCTCCCTCTTCTTTGCTCTCCACCTCCCAGCTCGCCCTTCCCTCCT
CATCGCCGCGGTCATTTGCCGTATTGGTGCCATGGCTGGTGAGCAGGAGG
GAAGGGAAGAGGGAGGGAAGGAGGGGCGGAGGGAAGACACAATATTCGAC
GTGGACTACATCAGTTCTTAAACCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCCCCCTCCCTCCCTCCAGCCTCGTCCACGACCTGGGT
CGCGACGCCTGAAGCCTACCCCACTGCCGTCCGCTCCACAGGCCATTCGG
TGGCGTCGGCGGTGGCGAGGGTGGGCGGTATCCTTGCCCCGCAGATCCTG
CGAGGAGACGCAGCAGATGGATGGGTGCCGGGTATCATTTTGACGGGTAA
GGAGGAGAGAGGGAGGGAGGGAGGGAGAGGGGAAGGGAGGGAAATGATGG
AAGGTCTTGCCAGTTACGAATCGCTTCCTTTGGTAGGGACATGGGTACAT
AGGGAGGATCACACCTCTATCAAGGCCTCTCTTGATGGTTCTTTTTCTTT
CCCCCTCATTCCTCCCCTCCATCCCTCCTCTCCTTCCTTCCCTTGTTCCA
TTTTCTTCCCCAAACAGTCATTTCTCTCATTGCGGGCGCCGCCGCGCTGA
TGCTGCCGGAAACTGGAGGCAAAAGTCTAGGGACGTTGGACGAGAAGAAG
GAGGTAGAGATGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCCGCAGCAGCAGCCGCAGCAGCAGGAGTAATAGCGGC
GAGAGTTGCAGGAGTAGCGGCAGGATGGAGGTGAAGGACTAGGCGTACAA
CGGAGGCGGATGAGGAGAAAGGAAGCGTCGCAGGGCGCGGTAATGTCCAT
GGAGGACGGGGAGGGAAGCCTAGGAGAGAGAGGATGAGGTCTAAGAGGAG
GGGGAGGAAGGGAGGGAGGAATGGGACTGAGGAGCGGGAGCTGTATCAAA
TTGTGGAGGCTTTATTGGTCGTCGTGTGGGTGAGTCGAGTTTCAGCAGCT
TCCATTTACATCAGGAGCACCCTCACCACCGAGAGTGAGTAGCAGCACAG
TTAGAATAGTGACTTTGCAGCAGGCCTACCAACACCATCAGTATTGAAGC
CCCCCCCCGCGTATAAGCAGCCACTCAAGTAAACAGAAGGCAACAGATTC
TTATTAGATGGTCCGATCTCACTCACCACATATTAAAATCACGCTGAACC
ATTTATGGGCCAGAAACAGAGAAAATTAATAACAATTTTTAGTAAAATTA
AGGAAAGAGAACACGATTGATTTGTGTTGCACGTGCATGCCGGCTCCGGA
AGGTACGTAAGGAAAAAGAAATAATGTAAAGCGAGTCGTGGATCACGCTC
CAGTCTTTTTGGGGGGGGCTGTATGTGTTTTTTTCTGTTTATTTCTTCTA
TTTTTTTTCTTGGTGCTGATTTTAGGCACGCTGCATGCTCCCGCTGCTCT
CTCTATCTCTTCTCCCCGACGTCACAACAAGGTATGCAGGGGCTTGCGTT
CCTATTTAGTATTTTATTAAAGAGGACTTGTCAAATTGACTTCTAAAATA
TTTTCTTTTCCGCTCCTCTGTACGTCCCCACGGTGATATTCCTACGACGC
TGGGGCCCAAAAACACCTTTAAGTGTGGATGTGGGAATGTCCATGTGCGG
TTGTAGGAGTATGTGTGGGGTGTATGTGGGTGTATGTATTTGGACTATAC
AGAAAGTTATGTAAGTTTTTTGCATAAAGATATATATATATATATGGCAT
AAAGAC

Coding sequence (CDS) from alignment at chr23:558677..564432-

>NO23G01520.1 ID=NO23G01520.1|Name=NO23G01520.1|organism=Nannochloropsis oceanica|type=CDS|length=1830bp|location=Sequence derived from alignment at chr23:558677..564432- (Nannochloropsis oceanica)
ATGGACGGTGGAGCCGAAAAACCAACATTGTGGGCCTTATCTCAGTCCCT
CGCATCCTCTCTAAGTTCCTCTTCCTCCCCCTTGACCGCATTCTCGACCT
CGTCTTCCGCGACTGCCGAAAAGGACCGGCCGTCGCAGCAACAGCAGCAG
CAGGAGTCCTATACTGGCATGGAGGAGAAACGTACGTGGACCATCGATGA
ACTCGAGGATCTTATTGGCCTTGGGCCCTTTCAGTTCTTCCTCCTCTTAA
TTGCCGGCTTGGGCTTCGCCGCGGACTGCATGGAGGTGACGTTGATGAGT
TTTATGGGCAATGGGGTCGGGCATGAGTGGGGCCTGAGCACTCACCGAAC
GCTTGCCTGGCTGGGTTTTGCGGTGTTTGGTGGCGAGTTCGTCGGCTGTC
TCATCTGGGGGCCGGTCTCGGACAGATGGGGGCGGCAAAAGGCCTACCTG
GCGTCCTGCATTATGATGCTCGTCTTCTCCATCGCCAGCGCCCTCTCTCC
TTCCTTTCCCTTTCTCCTCGTCACGCGCGCCCTGGTCGGCTTTGGAATTG
GCGGTCTCTCGGTGCCTTTCGACTTGCTCTGCGAAGTCACACCTACCAAA
TACCGAGGCACCATGCTACTGATGATGCAGATGTTTTGGGTGTTGGGCTC
GGTGGTTGTGGTGGGCATGGCCTGGGGAACGCTCGAGGAACACGGCTGGC
GGTACCTAACACTCGTGGCCTCGACCCCGCTGCTCGTTGCCACTCTGGCC
ATCTTCTGCCTCCCCGAGTCCCCTCGCTGGTTACTGGAGGAAGGGCAAAC
GGAAAAGGCGTGGCAAGTATTGGTAACGGCCGCCCGTTGGAACGGTCGAA
AGGATCTGCACAGCGATTTGATCAATTTGAGGTGCACCGAGACCCCTGCC
GAGGGAGTGAGGGAGGAAAGGCGAAAGGCGTCCATGGCAGCCACGGCAAC
GGCCATAGTGGTGGAGGAGGGGAGGGAGCAGGGAGCGGAGGAAGAGCCGA
TACCTTCCGCAGCACCAGCACCAGCAGCAGCAGCCCAGGACATCTGTCCC
CTTGAGCCCCACCACCACCATCCTTCCTCCTCCCCGCTCTCTTCCTCCTC
TTTTCTGTCCACCCTCCCCCTCCTTCTCAGCGCCGCCCTGCGCGCCACTA
CCCTCTGGCTGTGGGTCATTTGGTTCTCCTTTGGCCTTTTGTATTATGGC
ATCATCGTCCTCTCGGCCTCCATCTTCTCCTCGGAGGGGGAGGCAGGCAC
GGAGCATGGAGAGCTGTTTGACTACCCCACACTCATGTTTGCGGCGGCTT
CGGAGGCCGTGGGAGTCCTTTTAGCTATTGCCCTCCTCGAGCGGTGTGGG
CGCAAGAACACGCAAGTCTCCACCTACCTCCTGTCGGCCATTGGTGCCGC
CCTCCTCTCCCTCTTCTTTGCTCTCCACCTCCCAGCTCGCCCTTCCCTCC
TCATCGCCGCGGTCATTTGCCGTATTGGTGCCATGGCTGCCTCGTCCACG
ACCTGGGTCGCGACGCCTGAAGCCTACCCCACTGCCGTCCGCTCCACAGG
CCATTCGGTGGCGTCGGCGGTGGCGAGGGTGGGCGGTATCCTTGCCCCGC
AGATCCTGCGAGGAGACGCAGCAGATGGATGGGTGCCGGGTATCATTTTG
ACGGTCATTTCTCTCATTGCGGGCGCCGCCGCGCTGATGCTGCCGGAAAC
TGGAGGCAAAAGTCTAGGGACGTTGGACGAGAAGAAGGAGGTAGAGATGG
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CCGCAGCAGCAGCCGCAGCAGCAGGAGTAA

Synonyms

Publications