NO23G01360.1, NO23G01360.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01360.1
Unique NameNO23G01360.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length537
Alignment locationchr23:490113..490721 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:490113..490721 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01360NO23G01360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01360.1NO23G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01360.1.cds1NO23G01360.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO23G01360.1.cds2NO23G01360.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01360.1 ID=NO23G01360.1|Name=NO23G01360.1|organism=Nannochloropsis oceanica|type=mRNA|length=537bp
ATGAAAGGCGAGCCAGATGACGAGCAGATGAGGCAGCCGCAGCAGCTCGA
GCAGGATGCGAGATTCTTGGGAGGAGTGTCATTGTTGTTCTCTTCCCCCA
ATCAGCAGCAGCTACAGCTGCTGCTGGAACAGAAGCAGCACCAGATCCGA
CAGGAAGGAGGTGGAGGAGGACAGGGGGAGGGAGTGGGGGAAGGAGAGCA
GTCATACGTCGATGTTTCTGCTCCTGCAGCTGCAGCAGCTGCTGATGCTG
GTGGTGGTGGGAGGGAGCTGCACCAGCAGCAGCCGCAGCAACAGCAGCAC
CATCTGCTGCAACGGAAGCAGCACCAGCTCCGACAGGAGCTCCGACAGGA
TCGGGGAGGAGAGGGAGGAGGGAGGGATGGGGCAGAGGGAGAAGTAGAGC
TGTTAACTTGTTCTCTCACCGTGCAGCAACACTATCGTGATACCATTGTG
ACTGTGCAAAAACGGGGGGACGTGAAAAAGATGTCGGTGGAAGAATTCTC
GGCGTTTGCGGCCGCGGATGTCGTCCAACACATCTGA
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protein sequence of NO23G01360.1

>NO23G01360.1-protein ID=NO23G01360.1-protein|Name=NO23G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=179bp
MKGEPDDEQMRQPQQLEQDARFLGGVSLLFSSPNQQQLQLLLEQKQHQIR
QEGGGGGQGEGVGEGEQSYVDVSAPAAAAAADAGGGGRELHQQQPQQQQH
HLLQRKQHQLRQELRQDRGGEGGGRDGAEGEVELLTCSLTVQQHYRDTIV
TVQKRGDVKKMSVEEFSAFAAADVVQHI*
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mRNA from alignment at chr23:490113..490721+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01360.1 ID=NO23G01360.1|Name=NO23G01360.1|organism=Nannochloropsis oceanica|type=mRNA|length=609bp|location=Sequence derived from alignment at chr23:490113..490721+ (Nannochloropsis oceanica)
ATGAAAGGCGAGCCAGATGACGAGCAGATGAGGCAGCCGCAGCAGCTCGA
GCAGGATGCGAGATTCTTGGGAGGAGTGTCATTGTTGTTCTCTTCCCCCA
ATCAGCAGCAGCTACAGCTGCTGCTGGAACAGAAGCAGCACCAGATCCGA
CAGGAAGGAGGTGGAGGAGGACAGGGGGAGGGAGTGGGGGAAGGAGAGCA
GTCATACGTCGATGTTTCTGCTCCTGCAGCTGCAGCAGCTGCTGATGCTG
GTGGTGGTGGGAGGGAGCTGCACCAGGTCCGACCGGAGCAGGAACGGAGA
GGAGGAGGAAGGGGGAATGGAGGGTCGCCATGTTTCTTCTCCTCGTAGCA
GCAGCCGCAGCAACAGCAGCACCATCTGCTGCAACGGAAGCAGCACCAGC
TCCGACAGGAGCTCCGACAGGATCGGGGAGGAGAGGGAGGAGGGAGGGAT
GGGGCAGAGGGAGAAGTAGAGCTGTTAACTTGTTCTCTCACCGTGCAGCA
ACACTATCGTGATACCATTGTGACTGTGCAAAAACGGGGGGACGTGAAAA
AGATGTCGGTGGAAGAATTCTCGGCGTTTGCGGCCGCGGATGTCGTCCAA
CACATCTGA
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Coding sequence (CDS) from alignment at chr23:490113..490721+

>NO23G01360.1 ID=NO23G01360.1|Name=NO23G01360.1|organism=Nannochloropsis oceanica|type=CDS|length=537bp|location=Sequence derived from alignment at chr23:490113..490721+ (Nannochloropsis oceanica)
ATGAAAGGCGAGCCAGATGACGAGCAGATGAGGCAGCCGCAGCAGCTCGA
GCAGGATGCGAGATTCTTGGGAGGAGTGTCATTGTTGTTCTCTTCCCCCA
ATCAGCAGCAGCTACAGCTGCTGCTGGAACAGAAGCAGCACCAGATCCGA
CAGGAAGGAGGTGGAGGAGGACAGGGGGAGGGAGTGGGGGAAGGAGAGCA
GTCATACGTCGATGTTTCTGCTCCTGCAGCTGCAGCAGCTGCTGATGCTG
GTGGTGGTGGGAGGGAGCTGCACCAGCAGCAGCCGCAGCAACAGCAGCAC
CATCTGCTGCAACGGAAGCAGCACCAGCTCCGACAGGAGCTCCGACAGGA
TCGGGGAGGAGAGGGAGGAGGGAGGGATGGGGCAGAGGGAGAAGTAGAGC
TGTTAACTTGTTCTCTCACCGTGCAGCAACACTATCGTGATACCATTGTG
ACTGTGCAAAAACGGGGGGACGTGAAAAAGATGTCGGTGGAAGAATTCTC
GGCGTTTGCGGCCGCGGATGTCGTCCAACACATCTGA
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Synonyms
Publications