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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr23 | genome | chr23:266473..269815 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO23G00710.1 vs.
Match: EWM22966.1 (fad linked oxidase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1061.6 bits (2744), Expect = 9.300e-307 Identity = 492/621 (79.23%), Postives = 544/621 (87.60%), Query Frame = 0
Query: 1 MGVFWKVLVVISLLASASGSSLRSAKNEALSGDAPVQVGVDATSGVATLLSPEEQEASVGSFFKMEDAANEKLILVDDSELVFGKDPNDPTLTNWADNNKAFGLRKHHPKTYDEVAALVHQKSAEGAKLRPMGMVHSWSNLLPDDNTDVVFLDNFKLISQSPNDYSIVTVQAGVLQSELADWADSPARGIGRFSYLYQNTLVQPISFVGACQTASHGSGFLPPTPDYIMAMTIVDGNGEIKYFDQSHPDLKVMAACLGMCGIVLDVTVRFNPDTSANKVTQTKMQYQDLFPPRGVPISENYNPLKTFIEGHAGGAINYSPYNSALLHSGKLDVNKVEEYHQSDGVWTHAVDTLPGTSVCPVRTGLPIWGTQHEPFYDKDLFVPEDWMMNVPGSRVHRSFMGDWRLNTKWANYSPFMGKVVNNQVLFMNPPSFSYRTQVTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVDEDFGNIYEAWRVMIEESENMWREKDMIPLNIFCAIRWVGASSCPLSHAYGEPGERFAMLEPTSSHGTTGWEEYLGRVMARWTQIRSKDGSLPKPHWAKWDKEWTPQIIPYIKEVYGPQMDLIRPVIMRQDPAGIFRTDILCDLFGVPCLPC 622
M VFW L + +L ++G+ + N+ALS + Q+ + + +EA VG F K+E+ A +K++LVDDS+LVFG +P+ TLTNWA N K GLRKHHPKTYDEVAALV QK AEGAKLR MG+ HSWSN+LPDDNTDVVFLDNFKLI+QSPNDYSIVTVQAGVLQSELADWADSPARG GRFSYLYQNTLVQPI+FVGACQTASHGSGF+PPTPDYI+AMTI++ NGEIK++D SHPDL+VMAACLGMCGIVLDVTVRFNPDTSA VTQTKMQY DLFPPRGVPI+++YNPLK FIE HAGGAINYSPYNSALL S KLDVN +EEYHQSDGVW HAVD LPGT VCP R GLPIWGTQHEPFYDKDLFVPEDW+MN+PGSR+HRSFMGDWRLN+KWANYSPFMG+VVNNQVLFMNPPSFSYRT VTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVD+DFGNIYEAWRVMIEESENMWREKDMIPLNIF AIRWVGAS CPLSHA+G+PGERFAMLEPTSSHGTTGWEEYL RVMARWTQIRSKDGSLPKPHWAKW K+WTP++IPYIK+VY Q+ IRPV++RQDP GIFRT LCD+F +PCL C
Sbjct: 1 MRVFWHGLFMAALFCVSTGAKKLRSVNDALSREEQEQIEIKVDEMNGQISRHLGEEAGVGQFLKVEEMAQKKMVLVDDSDLVFGDNPDVDTLTNWAQNQKVTGLRKHHPKTYDEVAALVRQKRAEGAKLRVMGVAHSWSNVLPDDNTDVVFLDNFKLITQSPNDYSIVTVQAGVLQSELADWADSPARGYGRFSYLYQNTLVQPITFVGACQTASHGSGFVPPTPDYIIAMTIINANGEIKFYDSSHPDLRVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFIESHAGGAINYSPYNSALLRSAKLDVNMIEEYHQSDGVWAHAVDNLPGTPVCPSRDGLPIWGTQHEPFYDKDLFVPEDWLMNIPGSRIHRSFMGDWRLNSKWANYSPFMGQVVNNQVLFMNPPSFSYRTSVTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVDDDFGNIYEAWRVMIEESENMWREKDMIPLNIFAAIRWVGASECPLSHAFGKPGERFAMLEPTSSHGTTGWEEYLKRVMARWTQIRSKDGSLPKPHWAKWYKDWTPEVIPYIKQVYAAQIQRIRPVVLRQDPEGIFRTSTLCDIFDLPCLNC 621
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO23G00710.1 ID=NO23G00710.1|Name=NO23G00710.1|organism=Nannochloropsis oceanica|type=mRNA|length=2341bp ATGGGAGTCTTCTGGAAAGTACTGGTGGTGATCTCCTTACTAGCGAGCGC GTCGGGATCTTCTCTGCGATCAGCCAAGAACGAGGCGTTGAGCGGCGATG CTCCCGTGCAAGTAGGTGTGGATGCTACCAGTGGAGTAGCCACCCTGCTT TCTCCTGAGGAACAAGAAGCTTCCGTGGGTTCCTTCTTTAAAATGGAGGA TGCTGCCAATGAGAAATTAATTTTGGTGGACGACTCCGAGCTGGTGTTTG GCAAGGACCCCAACGACCCGACCCTTACCAACTGGGCTGATAATAATAAG GCATTTGGCCTGCGCAAGCATCACCCTAAAACTTACGACGAGGTCGCGGC CTTGGTTCACCAGAAGTCCGCTGAAGGGGCCAAGCTCCGCCCCATGGGGA TGGTGCACTCATGGTCAAACTTGCTGCCCGACGACAACACGGACGTGGTT TTCTTGGACAATTTTAAGCTTATCAGCCAAAGCCCTAACGACTACAGTAT CGTCACCGTCCAGGCTGGTGTGCTGCAGAGCGAGCTGGCTGATTGGGCAG ACAGCCCTGCGCGTGGGATCGGGCGATTCTCCTATTTGTATCAGAACACC TTAGTACAGCCCATTTCCTTCGTAGGCGCCTGTCAGACAGCCTCGCATGG CTCTGGATTCCTGCCCCCTACCCCAGACTACATCATGGCTATGACGATTG TTGACGGGAATGGGGAGATCAAGTACTTTGACCAGTCCCATCCTGACTTG AAGGTGATGGCAGCATGCCTTGGGATGTGCGGGATTGTTCTCGACGTGAC TGTACGGTTCAACCCAGACACAAGCGCCAACAAGGTTACCCAGACTAAGA TGCAGTACCAAGATTTGTTCCCCCCCCGCGGCGTGCCGATCTCTGAGAAC TACAACCCGCTCAAGACCTTCATCGAGGGCCACGCCGGCGGCGCCATCAA CTACTCCCCTTACAATAGCGCCCTGCTGCATTCCGGCAAGCTGGATGTGA ATAAGGTGGAGGAGTACCACCAAAGTGATGGGGTCTGGACCCATGCAGTA GACACGCTGCCCGGGACATCCGTCTGTCCTGTGCGCACGGGCTTGCCGAT TTGGGGGACCCAGCACGAGCCCTTTTATGACAAGGACTTGTTTGTGCCGG AGGACTGGATGATGAATGTTCCGGGCTCCCGCGTACATCGCTCCTTCATG GGCGACTGGCGCCTCAACACCAAGTGGGCCAACTACTCTCCCTTCATGGG GAAAGTCGTCAACAACCAGGTGCTGTTCATGAACCCGCCGTCGTTCTCCT ACAGGACTCAGGTCACCTACAACACCTCCAACGCCGGGTCCACCCACTTC CTGCGTTACATTGACGGCATCACCTCCGGTCTGGACTTCGAATTCGCATT CAAGGTGGACGAAGACTTTGGGAACATTTATGAGGCCTGGCGCGTGATGA TCGAGGAGAGCGAGAACATGTGGCGCGAGAAGGACATGATCCCCCTCAAC ATATTCTGCGCCATCCGGTGGGTGGGCGCCTCCTCCTGCCCTTTGTCTCA TGCCTACGGCGAGCCAGGGGAGCGATTTGCTATGTTGGAGCCTACGTCGT CCCATGGCACGACCGGCTGGGAGGAGTATCTGGGGCGAGTGATGGCCCGT TGGACCCAGATTCGCTCCAAGGACGGGAGTCTGCCCAAGCCCCACTGGGC TAAGTGGGACAAAGAGTGGACGCCGCAGATCATCCCTTACATCAAGGAGG TGTATGGCCCGCAGATGGATTTGATTCGGCCCGTGATCATGAGACAGGAC CCAGCGGGAATCTTCAGGACAGATATTTTGTGTGACTTGTTCGGGGTGCC ATGTTTGCCATGCCACAAGTAAGAATAAGGGGACGGGACGACAGCAGTTA AAGGGATGGGCATGAAGGTTTGATTGATTGCTCCAGTGTCTTTTGATTCC GACTTTGATTGGATTGGAATAACGTGGGAGTGGCCCGAGAGAGAGAGGTA AAAAATGAAACTGCCTGGCAGCGGTGGGAAAGGAAATTAAATACATACAT GGGATAGGATTGTCAGCAATGAAGCGGTTGAGTTGAAATGCAAAAAGACG GGTAAAGTCGAGAATCACGACTTTCAAATTCTTGGAAAGCGAGGAAAACG CGCATTCTAGACGATCACGACCTCCCCACACTTCGTACCACTGATCCATA CCCGGTCGATGTTTGTTGGGGGCATGCTTCCCATTTTTGAGCAAGCGCCT TTTCAGTCAGTCCAATGAAGCATCTCCAGTGCCAAGGGGCTGGAAAGAGG ATGGAAGGACAACGTAAACGACAAAAGACAATCAAGAGTCA back to topprotein sequence of NO23G00710.1 >NO23G00710.1-protein ID=NO23G00710.1-protein|Name=NO23G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=624bp MGVFWKVLVVISLLASASGSSLRSAKNEALSGDAPVQVGVDATSGVATLL SPEEQEASVGSFFKMEDAANEKLILVDDSELVFGKDPNDPTLTNWADNNK AFGLRKHHPKTYDEVAALVHQKSAEGAKLRPMGMVHSWSNLLPDDNTDVV FLDNFKLISQSPNDYSIVTVQAGVLQSELADWADSPARGIGRFSYLYQNT LVQPISFVGACQTASHGSGFLPPTPDYIMAMTIVDGNGEIKYFDQSHPDL KVMAACLGMCGIVLDVTVRFNPDTSANKVTQTKMQYQDLFPPRGVPISEN YNPLKTFIEGHAGGAINYSPYNSALLHSGKLDVNKVEEYHQSDGVWTHAV DTLPGTSVCPVRTGLPIWGTQHEPFYDKDLFVPEDWMMNVPGSRVHRSFM GDWRLNTKWANYSPFMGKVVNNQVLFMNPPSFSYRTQVTYNTSNAGSTHF LRYIDGITSGLDFEFAFKVDEDFGNIYEAWRVMIEESENMWREKDMIPLN IFCAIRWVGASSCPLSHAYGEPGERFAMLEPTSSHGTTGWEEYLGRVMAR WTQIRSKDGSLPKPHWAKWDKEWTPQIIPYIKEVYGPQMDLIRPVIMRQD PAGIFRTDILCDLFGVPCLPCHK* back to topmRNA from alignment at chr23:266473..269815- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO23G00710.1 ID=NO23G00710.1|Name=NO23G00710.1|organism=Nannochloropsis oceanica|type=mRNA|length=3343bp|location=Sequence derived from alignment at chr23:266473..269815- (Nannochloropsis oceanica) ATGGGAGTCTTCTGGAAAGTACTGGTGGTGATCTCCTTACTAGCGAGCGC
GTCGGGATCTTCTCTGCGATCAGCCAAGAACGAGGCGTTGAGCGGCGATG
CTCCCGTGCAAGTAGGTGTGGATGCTACCAGTGGAGTAGCCACCCTGCTT
TCTCCTGAGGAACAAGAAGCTTCCGTGGGTTCCTTCTTTAAAATGGAGGA
TGCTGCCAATGAGAAATTAATTTTGGTGGACGACTCCGAGCTGGTGTTTG
GCAAGGACCCCAACGACCCGACCCTTACCAACTGGGCTGATAATAATAAG
GCATTTGGCCTGCGCAAGCATCACCCTAAAACTTACGACGAGGTCGCGGC
CTTGGTTCACCAGAAGTCCGCTGAAGGGGCCAAGCTCCGCCCCATGGGGA
TGGTGCACTCATGGTCAAACTTGCTGCCCGACGACAACACGGACGTGGTT
TTCTTGGACAATTTTAAGCTTATCAGCCAAAGCCCTAACGACTACAGTAT
CGTCACCGTCCAGGCTGGTGTGCTGCAGAGCGAGCTGGCTGATTGGGCAG
ACAGCCCTGCGCGTGGGATCGGGCGATTCTCCTATTTGTATCAGGTGTGT
TACCCCCCCTCGCCTCCCTCTTTTCCCCTGCTCTCCTTTTTCACTACATT
CTTCCCTCCGAGGCAAGGAAATCACATTTGTTGGTCGTATCATAGATTTC
GCTCTTCATCATTTTAGGTAGATCTGGTGAATATAATGTCTACGAACTCA
CTCTTCCCTCTCTCCTTCTCCTTCTCGCTTCCCCTCTCCCTTCTTTCTCT
CACTCGCTGACTCTCAGAACACCTTAGTACAGCCCATTTCCTTCGTAGGC
GCCTGTCAGACAGCCTCGCATGGCTCTGGATTCCTGCCCCCTACCCCAGA
CTACATCATGGCTATGACGATTGTTGACGGGAATGGGGAGATCAAGTACT
TTGACCAGTCCCATCCTGACTTGAAGGTGATGGCAGCATGCCTTGGGATG
TGCGGGATTGTTCTCGACGTGACTGTACGGTTCAACCCAGACACAAGCGC
CAACAAGGTTACCCAGACTAAGATGCAGTACCAAGATTTGTTCCCCCCCC
GCGGCGTGCCGATCTCTGAGAACTACAACCCGCTCAAGACCTTCATCGAG
GGCCACGCCGGCGGCGCCATCAACTACTCCCCTTACAATAGCGCCCTGCT
GCATTCCGGCAAGCTGGATGTGAATAAGGTGGAGGAGTACCACCAAAGTG
ATGGGGTCTGGACCCATGCAGTAGACACGCTGCCCGGGACATCCGTCTGT
CCTGTGCGCACGGGCTTGCCGATTTGGGGGACCCAGCACGAGCCCTTTTA
TGACAAGGACTTGTTTGTGCCGGTAAAATTTGGTGGATTGGAGAGGGGTA
AATCCTTATTCTTTGAAAATTCTTGTTTGAAATTTGGGAAATCGCATTCA
GGTTTACTCTGTCACGTCTCTGCTTCCACCAGCAGCCAACTATTCCTACC
ATTTGGTCCATTCATTCAATCCCCTCCCTCTTTCCCTCCTCCGCCCAACG
CATGCAGGAGGACTGGATGATGAATGTTCCGGGCTCCCGCGTACATCGCT
CCTTCATGGGCGACTGGCGCCTCAACACCAAGTGGGCCAACTACTCTCCC
TTCATGGGGAAAGTCGTCAACAACCAGGTATCTCGGATTGGTTCCCATCA
TTTCCTCCTTCCTTCACTTACTCCCTTACACCAGTGCCTGGGCTGGATCC
CCGACGCACCTGCATGTCCGTCCTCGTTCGCCACCTCCCTCTCACCCTCT
CTTCTCCCATTGTTTCCTCCTTTCCTTCCACTTCACCCATAGGTGCTGTT
CATGAACCCGCCGTCGTTCTCCTACAGGACTCAGGTCACCTACAACACCT
CCAACGCCGGGTCCACCCACTTCCTGCGTTACATTGACGGCATCACCTCC
GGTCTGGACTTCGAATTCGCATTCAAGGTATGTTTCTAACCAAAGAAGGG
GGGCGAGGTGCGTGTTTTTAATAAGTCGCTGCGGGGCCGATAATGAATGA
ATCCCTGAGCGTGTGGCGGCTTGACCTTTCCCCTCTCATTTGATTTCATG
TTTCCTATTCATCTATTTAATCCTTCTCCTGCCCCTTCTCCCCCTCTCCT
TTAGGTGGACGAAGACTTTGGGAACATTTATGAGGCCTGGCGCGTGATGA
TCGAGGAGAGCGAGAACATGTGGCGCGAGAAGGACATGATCCCCCTCAAC
ATATTCTGCGCCATCCGGTGGGTGGGCGCCTCCTCCTGCCCTTTGTCTCA
TGCCTACGGCGAGCCAGGGGAGCGATTTGCTATGTTGGAGCCTACGTCGT
CCCATGGCACGAGTAAGTATTCGTAATGGAAATAATACGAGTTTCCCTGC
TCTTGTCACGTTTTGTTTCTGGCCATGAAGAAGGGGAAGGAGCAGGGGGG
AGGAAAAAAAGGGCGGGGGGGGGAAAGATACAGGCGCCTTCATCTCCCTT
TCACCGTTCCGGGCGAGCTTCAGTTCCAAAGGAAAATACGCATTTACCAC
GTGAATAGCTGACATTTCCCCTCCCTCCCCCACCATCTTTTTCTACCCTC
CCAATGCTCGAAAGCCGGCTGGGAGGAGTATCTGGGGCGAGTGATGGCCC
GTTGGACCCAGATTCGCTCCAAGGACGGGAGTCTGCCCAAGCCCCACTGG
GCTAAGTGGGACAAAGAGTGGACGCCGCAGATCATCCCTTACATCAAGGA
GGTGTATGGCCCGCAGATGGATTTGATTCGGCCCGTGATCATGAGACAGG
ACCCAGCGGGAATCTTCAGGACAGATATTTTGTGTGACTTGTTCGGGGTG
CCATGTTTGCCATGCCACAAGTAAGAATAAGGGGACGGGACGACAGCAGT
TAAAGGGATGGGCATGAAGGTTTGATTGATTGCTCCAGTGTCTTTTGATT
CCGACTTTGATTGGATTGGAATAACGTGGGAGTGGCCCGAGAGAGAGAGG
TAAAAAATGAAACTGCCTGGCAGCGGTGGGAAAGGAAATTAAATACATAC
ATGGGATAGGATTGTCAGCAATGAAGCGGTTGAGTTGAAATGCAAAAAGA
CGGGTAAAGTCGAGAATCACGACTTTCAAATTCTTGGAAAGCGAGGAAAA
CGCGCATTCTAGACGATCACGACCTCCCCACACTTCGTACCACTGATCCA
TACCCGGTCGATGTTTGTTGGGGGCATGCTTCCCATTTTTGAGCAAGCGC
CTTTTCAGTCAGTCCAATGAAGCATCTCCAGTGCCAAGGGGCTGGAAAGA
GGATGGAAGGACAACGTAAACGACAAAAGACAATCAAGAGTCA back to topCoding sequence (CDS) from alignment at chr23:266473..269815- >NO23G00710.1 ID=NO23G00710.1|Name=NO23G00710.1|organism=Nannochloropsis oceanica|type=CDS|length=1872bp|location=Sequence derived from alignment at chr23:266473..269815- (Nannochloropsis oceanica) ATGGGAGTCTTCTGGAAAGTACTGGTGGTGATCTCCTTACTAGCGAGCGC GTCGGGATCTTCTCTGCGATCAGCCAAGAACGAGGCGTTGAGCGGCGATG CTCCCGTGCAAGTAGGTGTGGATGCTACCAGTGGAGTAGCCACCCTGCTT TCTCCTGAGGAACAAGAAGCTTCCGTGGGTTCCTTCTTTAAAATGGAGGA TGCTGCCAATGAGAAATTAATTTTGGTGGACGACTCCGAGCTGGTGTTTG GCAAGGACCCCAACGACCCGACCCTTACCAACTGGGCTGATAATAATAAG GCATTTGGCCTGCGCAAGCATCACCCTAAAACTTACGACGAGGTCGCGGC CTTGGTTCACCAGAAGTCCGCTGAAGGGGCCAAGCTCCGCCCCATGGGGA TGGTGCACTCATGGTCAAACTTGCTGCCCGACGACAACACGGACGTGGTT TTCTTGGACAATTTTAAGCTTATCAGCCAAAGCCCTAACGACTACAGTAT CGTCACCGTCCAGGCTGGTGTGCTGCAGAGCGAGCTGGCTGATTGGGCAG ACAGCCCTGCGCGTGGGATCGGGCGATTCTCCTATTTGTATCAGAACACC TTAGTACAGCCCATTTCCTTCGTAGGCGCCTGTCAGACAGCCTCGCATGG CTCTGGATTCCTGCCCCCTACCCCAGACTACATCATGGCTATGACGATTG TTGACGGGAATGGGGAGATCAAGTACTTTGACCAGTCCCATCCTGACTTG AAGGTGATGGCAGCATGCCTTGGGATGTGCGGGATTGTTCTCGACGTGAC TGTACGGTTCAACCCAGACACAAGCGCCAACAAGGTTACCCAGACTAAGA TGCAGTACCAAGATTTGTTCCCCCCCCGCGGCGTGCCGATCTCTGAGAAC TACAACCCGCTCAAGACCTTCATCGAGGGCCACGCCGGCGGCGCCATCAA CTACTCCCCTTACAATAGCGCCCTGCTGCATTCCGGCAAGCTGGATGTGA ATAAGGTGGAGGAGTACCACCAAAGTGATGGGGTCTGGACCCATGCAGTA GACACGCTGCCCGGGACATCCGTCTGTCCTGTGCGCACGGGCTTGCCGAT TTGGGGGACCCAGCACGAGCCCTTTTATGACAAGGACTTGTTTGTGCCGG AGGACTGGATGATGAATGTTCCGGGCTCCCGCGTACATCGCTCCTTCATG GGCGACTGGCGCCTCAACACCAAGTGGGCCAACTACTCTCCCTTCATGGG GAAAGTCGTCAACAACCAGGTGCTGTTCATGAACCCGCCGTCGTTCTCCT ACAGGACTCAGGTCACCTACAACACCTCCAACGCCGGGTCCACCCACTTC CTGCGTTACATTGACGGCATCACCTCCGGTCTGGACTTCGAATTCGCATT CAAGGTGGACGAAGACTTTGGGAACATTTATGAGGCCTGGCGCGTGATGA TCGAGGAGAGCGAGAACATGTGGCGCGAGAAGGACATGATCCCCCTCAAC ATATTCTGCGCCATCCGGTGGGTGGGCGCCTCCTCCTGCCCTTTGTCTCA TGCCTACGGCGAGCCAGGGGAGCGATTTGCTATGTTGGAGCCTACGTCGT CCCATGGCACGACCGGCTGGGAGGAGTATCTGGGGCGAGTGATGGCCCGT TGGACCCAGATTCGCTCCAAGGACGGGAGTCTGCCCAAGCCCCACTGGGC TAAGTGGGACAAAGAGTGGACGCCGCAGATCATCCCTTACATCAAGGAGG TGTATGGCCCGCAGATGGATTTGATTCGGCCCGTGATCATGAGACAGGAC CCAGCGGGAATCTTCAGGACAGATATTTTGTGTGACTTGTTCGGGGTGCC ATGTTTGCCATGCCACAAGTAA back to top
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