NO22G02030.1, NO22G02030.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO22G02030.1
Unique Name	NO22G02030.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2905
Alignment location	chr22:624246..630706 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr22	genome	chr22:624246..630706 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO22G02030.1 vs.
Match: XP_005771585.1 (hypothetical protein EMIHUDRAFT_316202 [Emiliania huxleyi CCMP1516]; EOD19156.1 hypothetical protein EMIHUDRAFT_316202 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 827.0 bits (2135), Expect = 5.100e-236
Identity = 409/698 (58.60%), Postives = 513/698 (73.50%), Query Frame = 0

Query:  127 LEQEGLPKFAKIAPEAVVPAIRQLSQDFMTQFSQLEEECSKGGAASFEAVVETMEKARGPLEYGWGVVNHLLGVKNSDALREAHQTVQPEVVAMLTQIGQSRPLYDAMVAIQETPAEWAKLDEAQKRIVASSIRDMRLSGVGLEGAEKERFTAIKLELSKISTTFSNNVLDSTKAFSVVVTDKADLEGLPSMFYDLFAQNAVQKGHKEATGETGPWVIGLDMPSYLPAMQFLQNRNLRERLYRGFLKRASEGQFDNTENVKQILTLKKELAGLLGFNSYAEVSLASKMAPSAEAVQELTDLLRAKSYPFAVAELKAVQEYANRNGFEGS-LALWDLTYWAERMKEEKYGIKE---------EELRPYFALPNVLDGLFALTKRIFGIEIVAADGEVEVWDPAVRFFKVLDAESKEHIASFYLDPYSRPENKRGGAWMDVCTGKSRVLGRKPVAYLTCNGSPPVGDTPSLMTFREVETLFHEFGHGAQHMLTEVAHGDAAGINGVEWDAVELPSQFMENWCYDKPTFY--GMAKHYQTGEPVPEEIFEKLVALKHYNAGMTMLRQLYFGKMDMELHSNYDPNNSKGETIFDVQRRIAKDYTVMPPLDEDRFLLSFSHIFAGGYASGYYSYKWAEVMSADAFAAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTHPCEVYEKFRGRQPKPDALLRHSGLA 813
            L  E LP F+ I    V  A+        ++F  LE    + G  S+ AV+E +EK   P+EY WGVVNHL+GVKNSD LR AH  VQ EVV   T++ QS  ++ A+ A+++       L+ AQ+RIV SS+  MRLSGVGL+G EKERF A ++ LS++ST FSNN+LD+TKAFS+ +T+ A ++GLP     L A  A ++G + AT E+GPW +GLDMPSYLPAM+FL++R++RE LYR F+ RA E    N   ++QIL +K+E A +LGF SYAEVS+  KMAPS EAV +LT++L AK+YP A  EL+ + E+A  NGF+G+ LALWD+++W+ER+ E  +G ++         EELRPYFAL NVLDGLF L +R++G+EIV +DGE EVW   V FFKVLD  S EH+ASF+LDPY+RPENKRGGAWM VC G+S+VL RKPVAYLTCNGSPPV   PSLMTF EV TLFHE GHG QHMLT+VAH  AAGI+GVEWDAVELPSQFMENWCYD  T Y  GMAKHY+TGEP+P ++F KL   + + AGM M+RQL FG +DM LH  YDP     +T F++Q  +A+ Y V+PPL +DRFL SF HIFAGGY++GYYSYKWAEV+SADAFAAFEE GLD+E+ V+EVGRRFR TVLA+GGGT P +V+  FRGR P P+ LLRHSGLA
Sbjct:   49 LGSESLPLFSAIEAVHVKDAVSGALSSMESEFESLESRLQQSGDVSYSAVIEELEKLEAPVEYSWGVVNHLMGVKNSDELRAAHGEVQGEVVKTTTKLSQSEAVFKALEALEKD----GSLEPAQQRIVQSSLSSMRLSGVGLQGEEKERFNANRIRLSELSTAFSNNLLDATKAFSLTLTEPAQVDGLPPSALALAASRAAEEGEEGATAESGPWRLGLDMPSYLPAMKFLRDRSVREALYRAFVTRAGEV---NAPLIRQILQIKQEQASILGFGSYAEVSIERKMAPSVEAVYDLTEMLLAKAYPAAQKELQQLTEFATANGFDGAALALWDVSFWSERLSEHTFGFEQDRPLAPPPREELRPYFALDNVLDGLFGLCRRLYGVEIVRSDGEAEVWHADVGFFKVLDEASGEHLASFFLDPYARPENKRGGAWMGVCVGRSKVLDRKPVAYLTCNGSPPVDGKPSLMTFDEVTTLFHETGHGLQHMLTKVAHAPAAGISGVEWDAVELPSQFMENWCYDPATVYDAGMAKHYETGEPLPRDLFGKLCEQRTFQAGMGMIRQLMFGALDMRLHHTYDPRGE--QTPFELQHELAERYAVLPPLPDDRFLCSFGHIFAGGYSAGYYSYKWAEVLSADAFAAFEEAGLDDEQAVREVGRRFRDTVLALGGGTAPSDVFRAFRGRDPSPEPLLRHSGLA 737

The following BLAST results are available for this feature:

BLAST of NO22G02030.1 vs.

BLAST of NO22G02030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005771585.1	5.100e-236	58.60	hypothetical protein EMIHUDRAFT_316202 [Emiliania ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO22G02030	NO22G02030	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO22G02030.1	NO22G02030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO22G02030.1.cds1	NO22G02030.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds2	NO22G02030.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds3	NO22G02030.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds4	NO22G02030.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds5	NO22G02030.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds6	NO22G02030.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds7	NO22G02030.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds8	NO22G02030.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds9	NO22G02030.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds10	NO22G02030.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds11	NO22G02030.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds12	NO22G02030.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds13	NO22G02030.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds14	NO22G02030.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds15	NO22G02030.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds16	NO22G02030.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds17	NO22G02030.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds18	NO22G02030.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds19	NO22G02030.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds20	NO22G02030.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds21	NO22G02030.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02030.1.cds22	NO22G02030.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr22:624246..630706+
coding sequence from alignment at chr22:624246..630706+

mRNA sequence

>NO22G02030.1 ID=NO22G02030.1|Name=NO22G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=2905bp
CTTTTCGGTGATACGAGTAAATGCTGACGAGGACGGTCACCTTACATCCG
TGCGATGTCGTGTTTATGTTGGATGGTTGAGACTGCCAAAGCGTTATCAA
ACGTCTAGCCATGTCTAGCCGTCCCTTTCGACGTCCCCCCGTCCCCGATC
TTTCCCATTCCCCCATCAGGTTCCTCTCATCCAACACCAACACACAACAA
CAACAGCTTTCCTCTTGCTTTCGTCCTCATTCATCCCCGAGGCCCGGCCA
CACTCTACGTGCAGCCTGTCCCGCTTTTTGTCTTCCTATATATGCGCAGC
TCTCCTCAGCGACACCGCTTCGTCGTAGCCTTCCTCTTTGCCACTTGTTC
CTTCCTTGTCATGATGCGACGTGTTGCCCTGAGTGCCCACGCGGTTACTT
CCGCCCAGGCGGGGCGTGCCCGTGCACTTTTTCTGGGAACCAGCACCACT
GGCCGCGCTCACTCTTTGCACCACCAAAGCCACTACTACCGGTCCTCCAT
GCGTCCTGCCGCCCTGGCCACTGCCGCCGCTGCCTTGGGTGGGATGGGCC
TGTTGGGAGGGGTCTCAGGCGGCAGCAGCAGCGGCAATAATGGCCATGCG
GGCTTGACCACCATGTCCGCTGCCGCCGCCACTGCCACCCCTGCTGGTGT
GGGAGGAGGGAATGCTCTGTTGGAGCAGGAGGGACTGCCTAAATTTGCCA
AGATTGCACCTGAAGCCGTGGTGCCCGCCATCAGGCAGCTGTCACAGGAC
TTTATGACCCAATTCAGCCAACTGGAGGAGGAGTGCAGCAAAGGAGGCGC
AGCTTCTTTCGAGGCCGTCGTGGAGACCATGGAAAAGGCGCGCGGCCCGC
TGGAGTACGGCTGGGGTGTGGTGAATCATTTGCTTGGGGTCAAGAACAGC
GATGCCCTTCGAGAGGCCCACCAGACCGTGCAACCTGAGGTGGTGGCGAT
GCTGACCCAGATCGGACAGTCCCGCCCACTGTATGATGCGATGGTGGCCA
TCCAAGAGACGCCCGCCGAATGGGCCAAGCTCGACGAGGCTCAGAAGCGC
ATTGTGGCCTCCTCCATCCGCGACATGCGCCTGAGCGGCGTCGGTCTCGA
GGGTGCGGAGAAGGAGAGATTCACAGCCATTAAGCTGGAGCTCTCCAAAA
TATCCACCACTTTTAGTAACAATGTCCTTGACTCTACTAAGGCGTTTTCG
GTGGTGGTGACTGACAAGGCGGACCTGGAAGGACTCCCTTCCATGTTTTA
CGATCTTTTCGCGCAAAACGCCGTCCAGAAGGGACACAAGGAAGCCACGG
GCGAAACCGGACCGTGGGTCATCGGTCTAGACATGCCATCCTACCTCCCC
GCGATGCAGTTCCTGCAGAACCGTAACCTCCGCGAACGGCTCTATCGGGG
TTTTTTGAAACGGGCGTCCGAAGGCCAATTCGATAACACCGAGAATGTCA
AGCAGATTCTGACCCTCAAGAAGGAGTTGGCCGGTCTCCTGGGCTTCAAT
AGCTACGCCGAGGTCTCCCTCGCCTCCAAGATGGCCCCTTCGGCTGAGGC
GGTGCAAGAACTTACCGACCTCCTTCGCGCCAAATCTTATCCTTTCGCGG
TGGCTGAGCTCAAGGCCGTGCAGGAATATGCCAATAGGAATGGCTTCGAA
GGCTCCCTGGCCCTCTGGGATTTGACCTATTGGGCTGAGCGCATGAAGGA
GGAGAAATATGGCATCAAGGAAGAAGAGCTTCGGCCTTATTTCGCCCTTC
CCAACGTCCTCGACGGTCTCTTCGCCCTCACCAAACGAATCTTTGGCATT
GAGATTGTGGCAGCTGATGGGGAGGTTGAAGTGTGGGATCCCGCCGTGCG
TTTCTTCAAGGTCCTCGATGCGGAGAGCAAGGAGCATATCGCCTCTTTTT
ATCTTGACCCTTATTCTCGTCCTGAGAACAAACGCGGCGGTGCCTGGATG
GACGTCTGCACGGGCAAGAGCCGTGTGCTCGGCCGTAAGCCCGTGGCATA
CCTGACGTGCAACGGCTCCCCTCCTGTAGGGGATACGCCCTCGCTCATGA
CATTCAGGGAAGTAGAGACTCTCTTCCATGAATTCGGTCATGGAGCTCAA
CACATGCTCACCGAGGTCGCTCACGGCGATGCTGCTGGCATCAACGGCGT
CGAGTGGGATGCTGTGGAGCTCCCATCTCAGTTCATGGAAAATTGGTGCT
ACGATAAGCCCACCTTCTATGGCATGGCCAAGCACTACCAGACGGGCGAG
CCGGTTCCGGAGGAGATTTTCGAGAAGCTTGTGGCCCTCAAGCACTACAA
CGCCGGCATGACGATGCTCCGCCAGCTCTACTTCGGCAAAATGGACATGG
AGCTGCACAGCAACTACGACCCCAACAACAGCAAGGGTGAGACTATTTTT
GACGTGCAACGACGCATTGCCAAGGACTACACGGTCATGCCTCCCCTGGA
TGAAGACCGTTTCCTTCTCTCTTTCTCCCACATTTTCGCGGGTGGTTATG
CCTCGGGCTACTACTCGTACAAGTGGGCCGAGGTCATGTCAGCTGACGCC
TTCGCAGCCTTCGAAGAGGTGGGCCTTGACAACGAGGAGAAGGTCCAAGA
AGTCGGCCGTCGGTTCCGACAGACGGTGCTGGCCATGGGCGGCGGCACAC
ACCCTTGTGAGGTCTATGAGAAGTTCCGCGGGCGCCAGCCCAAGCCCGAC
GCTCTGTTGAGGCATTCGGGCCTAGCCCAGGAGGGGGCATGCGCGGCCAA
GTAGAGAGAGGAAGGAAGGGAGGATTGGAGGGAGGGAGAGAGGGAGGCAA
AGGAGGGTTATGGACGACATGAAAGAAGTAGATAAGTCTTCAAGGTACTT
GCCGGAGTTGGGAAATCGTGTTGACTGAACAAGAATGAATCCGAATTGTG
AACCA

protein sequence of NO22G02030.1

>NO22G02030.1-protein ID=NO22G02030.1-protein|Name=NO22G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=821bp
MRSSPQRHRFVVAFLFATCSFLVMMRRVALSAHAVTSAQAGRARALFLGT
STTGRAHSLHHQSHYYRSSMRPAALATAAAALGGMGLLGGVSGGSSSGNN
GHAGLTTMSAAAATATPAGVGGGNALLEQEGLPKFAKIAPEAVVPAIRQL
SQDFMTQFSQLEEECSKGGAASFEAVVETMEKARGPLEYGWGVVNHLLGV
KNSDALREAHQTVQPEVVAMLTQIGQSRPLYDAMVAIQETPAEWAKLDEA
QKRIVASSIRDMRLSGVGLEGAEKERFTAIKLELSKISTTFSNNVLDSTK
AFSVVVTDKADLEGLPSMFYDLFAQNAVQKGHKEATGETGPWVIGLDMPS
YLPAMQFLQNRNLRERLYRGFLKRASEGQFDNTENVKQILTLKKELAGLL
GFNSYAEVSLASKMAPSAEAVQELTDLLRAKSYPFAVAELKAVQEYANRN
GFEGSLALWDLTYWAERMKEEKYGIKEEELRPYFALPNVLDGLFALTKRI
FGIEIVAADGEVEVWDPAVRFFKVLDAESKEHIASFYLDPYSRPENKRGG
AWMDVCTGKSRVLGRKPVAYLTCNGSPPVGDTPSLMTFREVETLFHEFGH
GAQHMLTEVAHGDAAGINGVEWDAVELPSQFMENWCYDKPTFYGMAKHYQ
TGEPVPEEIFEKLVALKHYNAGMTMLRQLYFGKMDMELHSNYDPNNSKGE
TIFDVQRRIAKDYTVMPPLDEDRFLLSFSHIFAGGYASGYYSYKWAEVMS
ADAFAAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTHPCEVYEKFRGRQP
KPDALLRHSGLAQEGACAAK*

mRNA from alignment at chr22:624246..630706+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO22G02030.1 ID=NO22G02030.1|Name=NO22G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=6461bp|location=Sequence derived from alignment at chr22:624246..630706+ (Nannochloropsis oceanica)
CTTTTCGGTGATACGAGTAAATGCTGACGAGGACGGTCACCTTACATCCG
TGCGATGTCGTGTTTATGTTGGATGGTTGAGACTGCCAAAGCGTTATCAA
ACGTCTAGCCATGTCTAGCCGTCCCTTTCGACGTCCCCCCGTCCCCGATC
TTTCCCATTCCCCCATCAGGTTCCTCTCATCCAACACCAACACACAACAA
CAACAGCTTTCCTCTTGCTTTCGTCCTCATTCATCCCCGAGGCCCGGCCA
CACTCTACGTGCAGCCTGTCCCGCTTTTTGTCTTCCTATATATGCGCAGC
TCTCCTCAGCGACACCGCTTCGTCGTAGCCTTCCTCTTTGCCACTTGTTC
CTTCCTTGTCATGATGCGACGTGTTGCCCTGAGTGCCCACGCGGTTACTT
CCGCCCAGGCGGGGCGTGCCCGTGCACTTTTTCTGGGAACCAGCACCACT
GGTACGTACATGTAATGAGTGTTTGTCGCATAATTTGTGTTCTGTTTTTG
TTAAATTAATTAGGTCAATCCACGCACACATTTACCCTCTGCCCCCCTCC
GCCCCCTTCCCCTGTAGGCCGCGCTCACTCTTTGCACCACCAAAGCCACT
ACTACCGGTCCTCCATGCGTCCTGCCGCCCTGGCCACTGCCGCCGCTGCC
TTGGGTGGGATGGGCCTGTTGGGAGGGGTCTCAGGCGGCAGCAGCAGCGG
CAATAATGGCCATGCGGGCTTGACCACCATGTCCGCTGCCGCCGCCACTG
CCACCCCTGCTGGTGTGGGAGGAGGGAATGCTCTGTTGGAGCAGGAGGGA
CTGCCTAAATTTGCCAAGATTGCACCTGAAGCCGTGGTGCCCGCCATCAG
GCAGCTGTCACAGGTGGGGGGAGAGGAGGGAGGAAAGGGGGGAGAGAGAT
AGGGAGGGGATGAGGAATTGCGGGCAGGAGACAATCCGAGTCCTTGGAAG
ATGTATCCAGATTCCTCGCATTTTCTCATGGATTCCTCCCTCCCTCACTT
CCTCCTCTCCTCCTTCCCTCCCTTCCTCCCTCCCTTCCTCCCTTCTCCCT
TCCCTCCAGGACTTTATGACCCAATTCAGCCAACTGGAGGAGGAGTGCAG
CAAAGGAGGCGCAGCTTCTTTCGAGGCCGTCGTGGAGACCATGGAAAAGG
CGCGCGGCCCGCTGGTACGTTCTCTCTCTCCCTCCCTCCCTCCTTCCCTC
CCTCCCTCCCTCATTCTTGTCTTGCCTGCCTGCCTGCCAGTCTTGCCTCT
CTATATCAACCCCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTGCTGCCCTGAGATGCCCCCCCTGACACAACCACCCT
CCTCCCCTCCCTTCCTCCTTTGCCAGGAGTACGGCTGGGGTGTGGTGAAT
CATTTGCTTGGGGTCAAGAACAGCGATGCCCTTCGAGAGGCCCACCAGAC
CGTGCAACCTGAGGTAGGGAGACGGGGGGGAGGGAGGAAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGAAGGAAAGAAAGGCGATGGATTGTTGTATTA
TCCGCATATTCGTGTTCTTCTTCATATCTATACACAAATACACATGTAGG
TGGTGGCGATGCTGACCCAGATCGGACAGGTAAGCACGGGCCTCCCTCCG
TCCCTCCCTCCCTCCCCCCTTCCCTCCCTCTATTCCCTTCGTCCCACCCG
TCCGCCACCATCATTCCCCCTCCCACACGCAGCCTTTCCCTCTCTTTCCC
TTCCTTCCTCCCTCCCTCCCTCCCTCCGCGCCGCCCTCTGTATGTTGCGA
CCGTGGCGACCCAAAAGATACCGATCCCCACTTACCCTCCCCCCCTCCCC
CCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTTCAGTCCCGCCCACTGTAT
GATGCGATGGTGGCCATCCAAGAGACGCCCGCCGAATGGGCCAAGCTCGA
CGAGGCTCAGAAGCGCATTGTGGCCTCCTCCATCCGGTACCACCCTCCCT
TCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTGCTGCCCTGAGATGCCCCCCCTGACACAACCACCCCCCTCGTCTCCCT
CTCTTCCTCCCCCTTCTTCATCCAGCGACATGCGCCTGAGCGGCGTCGGT
CTCGAGGGTGCGGAGAAGGAGAGATTCACAGCCATTAAGCTGGAGCTCTC
CAAAATATCCACCACTTTTAGTAACAATGTCCTTGACTCTACTAAGGTAA
CCTCTCACCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCTCCCTTC
CCTCGACCCGTTTCCATCCATCCTCCCGTGCGTACGATCGGCACTATCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCCCCAGGCG
TTTTCGGTGGTGGTGACTGACAAGGCGGACCTGGAAGGACTCCCTTCCAT
GTTTTACGATCTTTTCGCGCAAAACGCCGTCCAGAAGGGACACAAGGAAG
CCACGGGGTAAGCATCCCGCCCTCCCTCCCTCCCCCCCTCCCTCCCCCCC
TCCCTCACTCCCTCTCTCCCCCCTCCTTCCTTCCCTCCTCCTCTTTTGAT
TCTTCCCCTCTTGATCCAAACCCACTCAATCCCCCTCCCTTTTTCCCTTC
TTCCCTCCCTCCCTCCCTCCCTCCCTCGCAGCGAAACCGGACCGTGGGTC
ATCGGTCTAGACATGCCATCCTACCTCCCCGCGATGCAGTTCCTGCAGAA
CCGTAACCTCCGCGAACGGCTCTATCGGGGTTTTTTGAAACGGGCGTCCG
AAGGCCAATTCGATAACACCGAGAATGTCAAGCAGGTACCCTCCCCCCCT
CCCATCCTCCCTCCCTCCCTCCTTTCCGATCTCCTCGCCTCAGCCTCCCT
CCCTCCCTCCCTCCCTAGATTCTGACCCTCAAGAAGGAGTTGGCCGGTCT
CCTGGGCTTCAATAGCTACGCCGAGGTCTCCCTCGCCTCCAAGATGGTAT
CTCCCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTTGA
ACGACCATCACCCTGTCGCACCCTACACTCACATCGTCTTCAACGCCTCC
CTCCCTCGCTCTCCCTCCCGCCCTCCCTCCCTCCCTCCATCCCTCTCTCC
CGCCCTTTCTCCTCGCTGTTGCTCCCCGCTTAATTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCTCTCCCTGCCTGCCTCAGGCCCCTTCGGCTGA
GGCGGTGCAAGAACTTACCGACCTCCTTCGCGCCAAATCTTATCCTTTCG
CGGTGGCTGAGCTCAAGGCCGTGCAGGAATATGCCAATAGGAATGGGTTC
GTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCTTCCCTCATCT
GCCGCCTTCCTATCCCTGTTCATTCCTATATCTCCTACCTCCATTCTTCC
TCTCCCTCCCTCACTCCCCACCTCCCTCCCTTTTTCCCTTCCTCCTACTT
GTCGACTGCATCCGCCAGCCAACCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTAGCTTCGAAGGCTCCCTGGCCCTCTGGGATTTGAC
CTATTGGGCTGAGCGCATGAAGGAGGAGAAATATGGCATCAAGGTCCGTG
CCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTCTT
CCCCACCTTCCGCCCACCCTCCTCCCTCCCTCCTCTTCTCAGCACCCCCC
CCTTCCTCCACCCCCTCCCTCCCTCCCTCCCTCCCAGGAAGAAGAGCTTC
GGCCTTATTTCGCCCTTCCCAACGTCCTCGACGGTCTCTTCGCCCTCACC
AAACGAATCTTTGGCATTGAGATTGTGGCAGCTGATGGGGAGGTTGAAGT
GTGGGATCCCGCCGTGCGTTTCTTCAAGGTACGCGCGTTCCTTCCCTCCC
TCCCTCCCTCCCTCCTTCAGGTCCTCGATGCGGAGAGCAAGGAGCATATC
GCCTCTTTTTATCTTGACACTCCCTCCCCCCCTCCCTCCCTCCCTCCCTC
CTTCAGGTCCTCGATGCGGAGAGCAAGGAGCATATCGCCTCTTTTTATCT
TGACCCTTATTCTCGTCCTGAGAACAAACGCGGCGGTGCCTGGATGGACG
TCTGCACGGGCAAGAGCCGTGTGCTCGGTACGTCCCCTCCCTTCCTCCCT
CCCTCCCTCCCTTGCCCACCCTTCGTGCAGGAACGTTGTGCATATCGCTG
ATCGACCGACCGCCCTCCCTCCCTCCCTCCCTCCGTCCCGCCCTCCCTCC
CTCAGGCCGTAAGCCCGTGGCATACCTGACGTGCAACGGCTCCCCTCCTG
TAGGGGATACGCCCTCGCTCATGACATTCAGGTGCCGAGGGAGGGAGGCA
GGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGGTAGGGAGATTGGCTTCCC
TGTGACCACTACCGTGCTCATCCCTCCCTCCCTCCCTCCCTTTCTCCTTC
CCTCCTTCCCTCCCTCCCTCCCTCCAGGGAAGTAGAGACTCTCTTCCATG
AATTCGGTCATGGAGCTCAACACATGCTCACCGAGGTCGCTCACGGCGAT
GCTGCTGGCATCAACGGTACCTACTCCTCCCTCCCTCCCTCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCTTCAACAATCTTCTCCTACACCAC
CCTCCAAGCTCACACCTCCTCCCTCACTCCCTCCCTCCCTCTCTCCCTCC
CTCCCTTCCTCCAGGCGTCGAGTGGGATGCTGTGGAGCTCCCATCTCAGT
TCATGGAAAATTGGTGCTACGATAAGGTAGAGGGAGGGGGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGAAGGGAGGAACGGAAGAAGCCTGAACGAATATAAAAAAAC
TCTTTCTGTCTTTAAAGAGCCCAATTTGTATGCTTTTTTCCCTTGGCCCA
TCCCTCCCCTCCCCCCTCCCTCCCTCCCTGCCTTCCTGCCTGCCTAGCCC
ACCTTCTATGGCATGGCCAAGCACTACCAGACGGGCGAGCCGGTTCCGGA
GGAGATTTTCGAGAAGCTTGTGGCCCTCAAGCACTACAACGCCGGCATGA
CGATGCTCCGCCAGCTCTACTTCGGTACCTTCCTCCCTTCCTCCCTCCCT
TCCTCCCTCCCTCCATCATTTGTCGCGGGCTTGGACTTGTCGTTCCTCGT
CCTCGGTTCCTCCCTCCCTCCCTCTCTTCCCCTTACTCCCTCCCTCTCTC
TCTTCCGCGTAATTGTCTTACTTTTTCCTGACGCGACGCACCCTTCCTTC
CCTCCCTCCCTCCCTCCCTCCCTCAGGCAAAATGGACATGGAGCTGCACA
GCAACTACGACCCCAACAACAGCAAGGGCAAGGAGGGAGGGAGGGAGGGA
GGGAGGGGGGGAAGGAGGGAGGGCTGAGCAGAAGGCAGTGCATCGTTTAT
ATGTTATTCACAATCCTAATCTACTTCCTCACCCGATTAACTAAACTGCT
AATGTAATCTTGATTCAGGTGAGACTATTTTTGACGTGCAACGACGCATT
GCCAAGGACTACACGGTCATGCCTCCCCTGGATGAAGACCGTTTCCTTCT
CTCTTTCTCCCACATTTTCGCGGGTGGTTATGCCTCGGGGTAAAGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGCGGGAA
GAACCCCACGGTCTCGAGACCGCAAGGCACACAAGCAACAAGACTGATCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGCTACTACTCGTACAAGT
GGGCCGAGGTCATGTCAGCTGACGCCTTCGCAGCCTTCGAAGAGGTGGGC
CTTGACAACGAGGAGAAGGTCCAAGAAGTCGGCCGTCGGTTCCGACAGGT
ACGTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGATACCT
TTTCCCTCCTCTGGATGAATCAAGCCCAAGGATGGGATGGTATTCTCCGA
ATTTTCACGGCCGGCAACCTTACCCCGTCCTCCCTCCCCCCCTTCCTCCC
TCCCTCCCTCCCTCCTTTCCTCTCTCAGACGGTGCTGGCCATGGGCGGCG
GCACACACCCTTGTGAGGTCTATGAGAAGTTCCGCGGGCGCCAGCCCAAG
CCCGACGCTCTGTTGAGGCATTCGGGCCTAGCCCAGGAGGGGGCATGCGC
GGCCAAGTAGAGAGAGGAAGGAAGGGAGGATTGGAGGGAGGGAGAGAGGG
AGGCAAAGGAGGGTTATGGACGACATGAAAGAAGTAGATAAGTCTTCAAG
GTACTTGCCGGAGTTGGGAAATCGTGTTGACTGAACAAGAATGAATCCGA
ATTGTGAACCA

Coding sequence (CDS) from alignment at chr22:624246..630706+

>NO22G02030.1 ID=NO22G02030.1|Name=NO22G02030.1|organism=Nannochloropsis oceanica|type=CDS|length=2463bp|location=Sequence derived from alignment at chr22:624246..630706+ (Nannochloropsis oceanica)
ATGCGCAGCTCTCCTCAGCGACACCGCTTCGTCGTAGCCTTCCTCTTTGC
CACTTGTTCCTTCCTTGTCATGATGCGACGTGTTGCCCTGAGTGCCCACG
CGGTTACTTCCGCCCAGGCGGGGCGTGCCCGTGCACTTTTTCTGGGAACC
AGCACCACTGGCCGCGCTCACTCTTTGCACCACCAAAGCCACTACTACCG
GTCCTCCATGCGTCCTGCCGCCCTGGCCACTGCCGCCGCTGCCTTGGGTG
GGATGGGCCTGTTGGGAGGGGTCTCAGGCGGCAGCAGCAGCGGCAATAAT
GGCCATGCGGGCTTGACCACCATGTCCGCTGCCGCCGCCACTGCCACCCC
TGCTGGTGTGGGAGGAGGGAATGCTCTGTTGGAGCAGGAGGGACTGCCTA
AATTTGCCAAGATTGCACCTGAAGCCGTGGTGCCCGCCATCAGGCAGCTG
TCACAGGACTTTATGACCCAATTCAGCCAACTGGAGGAGGAGTGCAGCAA
AGGAGGCGCAGCTTCTTTCGAGGCCGTCGTGGAGACCATGGAAAAGGCGC
GCGGCCCGCTGGAGTACGGCTGGGGTGTGGTGAATCATTTGCTTGGGGTC
AAGAACAGCGATGCCCTTCGAGAGGCCCACCAGACCGTGCAACCTGAGGT
GGTGGCGATGCTGACCCAGATCGGACAGTCCCGCCCACTGTATGATGCGA
TGGTGGCCATCCAAGAGACGCCCGCCGAATGGGCCAAGCTCGACGAGGCT
CAGAAGCGCATTGTGGCCTCCTCCATCCGCGACATGCGCCTGAGCGGCGT
CGGTCTCGAGGGTGCGGAGAAGGAGAGATTCACAGCCATTAAGCTGGAGC
TCTCCAAAATATCCACCACTTTTAGTAACAATGTCCTTGACTCTACTAAG
GCGTTTTCGGTGGTGGTGACTGACAAGGCGGACCTGGAAGGACTCCCTTC
CATGTTTTACGATCTTTTCGCGCAAAACGCCGTCCAGAAGGGACACAAGG
AAGCCACGGGCGAAACCGGACCGTGGGTCATCGGTCTAGACATGCCATCC
TACCTCCCCGCGATGCAGTTCCTGCAGAACCGTAACCTCCGCGAACGGCT
CTATCGGGGTTTTTTGAAACGGGCGTCCGAAGGCCAATTCGATAACACCG
AGAATGTCAAGCAGATTCTGACCCTCAAGAAGGAGTTGGCCGGTCTCCTG
GGCTTCAATAGCTACGCCGAGGTCTCCCTCGCCTCCAAGATGGCCCCTTC
GGCTGAGGCGGTGCAAGAACTTACCGACCTCCTTCGCGCCAAATCTTATC
CTTTCGCGGTGGCTGAGCTCAAGGCCGTGCAGGAATATGCCAATAGGAAT
GGCTTCGAAGGCTCCCTGGCCCTCTGGGATTTGACCTATTGGGCTGAGCG
CATGAAGGAGGAGAAATATGGCATCAAGGAAGAAGAGCTTCGGCCTTATT
TCGCCCTTCCCAACGTCCTCGACGGTCTCTTCGCCCTCACCAAACGAATC
TTTGGCATTGAGATTGTGGCAGCTGATGGGGAGGTTGAAGTGTGGGATCC
CGCCGTGCGTTTCTTCAAGGTCCTCGATGCGGAGAGCAAGGAGCATATCG
CCTCTTTTTATCTTGACCCTTATTCTCGTCCTGAGAACAAACGCGGCGGT
GCCTGGATGGACGTCTGCACGGGCAAGAGCCGTGTGCTCGGCCGTAAGCC
CGTGGCATACCTGACGTGCAACGGCTCCCCTCCTGTAGGGGATACGCCCT
CGCTCATGACATTCAGGGAAGTAGAGACTCTCTTCCATGAATTCGGTCAT
GGAGCTCAACACATGCTCACCGAGGTCGCTCACGGCGATGCTGCTGGCAT
CAACGGCGTCGAGTGGGATGCTGTGGAGCTCCCATCTCAGTTCATGGAAA
ATTGGTGCTACGATAAGCCCACCTTCTATGGCATGGCCAAGCACTACCAG
ACGGGCGAGCCGGTTCCGGAGGAGATTTTCGAGAAGCTTGTGGCCCTCAA
GCACTACAACGCCGGCATGACGATGCTCCGCCAGCTCTACTTCGGCAAAA
TGGACATGGAGCTGCACAGCAACTACGACCCCAACAACAGCAAGGGTGAG
ACTATTTTTGACGTGCAACGACGCATTGCCAAGGACTACACGGTCATGCC
TCCCCTGGATGAAGACCGTTTCCTTCTCTCTTTCTCCCACATTTTCGCGG
GTGGTTATGCCTCGGGCTACTACTCGTACAAGTGGGCCGAGGTCATGTCA
GCTGACGCCTTCGCAGCCTTCGAAGAGGTGGGCCTTGACAACGAGGAGAA
GGTCCAAGAAGTCGGCCGTCGGTTCCGACAGACGGTGCTGGCCATGGGCG
GCGGCACACACCCTTGTGAGGTCTATGAGAAGTTCCGCGGGCGCCAGCCC
AAGCCCGACGCTCTGTTGAGGCATTCGGGCCTAGCCCAGGAGGGGGCATG
CGCGGCCAAGTAG

Synonyms

Publications