NO22G02020.1, NO22G02020.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO22G02020.1
Unique Name	NO22G02020.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3222
Alignment location	chr22:616254..621719 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr22	genome	chr22:616254..621719 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO22G02020.1 vs.
Match: OCQ90694.1 (tyrosine transporter [Nostoc sp. MBR 210])

HSP 1 Score: 157.5 bits (397), Expect = 1.500e-34
Identity = 114/323 (35.29%), Postives = 174/323 (53.87%), Query Frame = 0

Query:  193 VVSSAALIAGCMIGAGVLALPSVTVHTGILPSSMAILSVWAYCAASGLLIGEVCINSKGSSAHASY-----LKIAGATVGKGLASLAFGVFTIFQYFLLAAYISQGGALL-DGFAHLLPSLHGLALPSSLPPTLPPLAAFTAAMAALFVGANQRTLENFNNVVVVGVVACFAALLLAGTSTVDPSLYNHVDFGALQDVVPVAMCALVFQNVVPVVAANLNFDRAKVMSAILLGSGMPAFMYLTWNAMILGNVHLDSLGEHGLDLYSLL-----GGGEARLG---------AIATSFIGCILSIVEEFAEFGRSFQTTAPTRPP 496
            V+ S AL+AG  +GAG+LALP+VT+ +G++PS++ ++ VW Y   SGLLI EV +N+  S+   S      +K    T G G+AS+A+    +  Y LL AY++QGG +L    +HL    + L       P+    AAFT    ++     ++ +E  NN +V  V+  F  L L G + V    +   ++ AL   VPV + AL + NVVPVV   L  D  KV  +I++GS +P  M+L WNA+ILG+V  +++  H   ++  +     GGG   LG         AIATSFIG +  +++ F +     QT + +R P
Sbjct:   15 VLGSTALVAGTTVGAGILALPAVTLPSGVIPSTVLLIGVWLYTLVSGLLIAEVSVNTMRSAGCPSVGLMAMIKNTLGTTGAGIASVAY---MLQHYALLVAYVTQGGEILMSAVSHLWGGENYL-------PSWVGTAAFTLLFGSIMYLGREKFIEKLNNFLVGIVIVSFLGLFLLGVTQVQGVHFLFQNWSALGTAVPVMLVALFYHNVVPVVVTQLEGDSRKVRQSIIVGSAIPLVMFLAWNAVILGSVSPETI--HSTTIFDPIQVLRAGGGGELLGVLVSIFSEFAIATSFIGFVYGLLDFFQDIFAKTQTKSTSRLP 325

The following BLAST results are available for this feature:

BLAST of NO22G02020.1 vs.

BLAST of NO22G02020.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OCQ90694.1	1.500e-34	35.29	tyrosine transporter [Nostoc sp. MBR 210]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO22G02020	NO22G02020	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO22G02020.1	NO22G02020.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO22G02020.1.cds1	NO22G02020.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds2	NO22G02020.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds3	NO22G02020.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds4	NO22G02020.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds5	NO22G02020.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds6	NO22G02020.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds7	NO22G02020.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds8	NO22G02020.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds9	NO22G02020.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds10	NO22G02020.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds11	NO22G02020.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds12	NO22G02020.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds13	NO22G02020.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds14	NO22G02020.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G02020.1.cds15	NO22G02020.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr22:616254..621719-
coding sequence from alignment at chr22:616254..621719-

mRNA sequence

>NO22G02020.1 ID=NO22G02020.1|Name=NO22G02020.1|organism=Nannochloropsis oceanica|type=mRNA|length=3222bp
ATGCAGTGCAATTTTTCGAGCGTGGGGGCCAAGCGGAATGTCTTTATGTT
GGGCTGTGGCAGCCTACTCGCCGCCTTTCTCCTCCTCCTCAGCCCCCGCT
CCTCCCAAGCTCTCCTCCCCTTCTCCTCCACCACCACCAACCGGGGCCGC
CCTCTTTCCCGCCCTCCCTCCCTCCCTGCCTTCCTCCCGGCGCCTCACCA
GCTCCATTCCCACAATCCCCACTTTCCTCATTTCCATCTCCATCCCCACG
GTTCGCCTGCGGACGAGGAGGAGGAGCGGAGAGAGGGAGGTGTGGGAAGG
AAGGGGGGGATGGCGAGCCGGAGAGGACGGGCCTTATTCATGGCTCGGGA
TTTGATCGATGTCAAGGGTCTGCCCAAGGCAAACATCATGCGGACAAACA
GCTCTGCGGCCTTTGCCCTGGAGCAGGAGGCACGATTGAAAAGCGGTCCT
TCCTTCGATCACCTAGGGCGAGGCCTGGAGGACATGATAAGCGAGCTCCA
AGATCTGGACATAAAGCAACGGATGATGACGATGACGACAGCGATGGCGT
CAGCTTTGCCTCTCCCTGCGGCAGGGGTGGTGAGCAGCGCAGCCTTGATC
GCCGGGTGCATGATTGGAGCGGGGGTGCTTGCCCTCCCTTCGGTGACGGT
GCACACGGGCATCCTGCCTTCGTCCATGGCAATATTGAGTGTATGGGCCT
ACTGCGCTGCCTCCGGCCTCCTTATTGGGGAGGTGTGCATCAACAGCAAG
GGATCGAGCGCCCATGCTTCCTATTTGAAGATCGCGGGGGCGACCGTAGG
AAAGGGATTAGCATCCCTGGCCTTTGGGGTCTTTACTATCTTCCAATACT
TCCTCCTCGCCGCGTATATCTCACAGGGCGGTGCCTTGTTGGATGGTTTT
GCCCACCTCCTTCCGAGCCTGCACGGGCTTGCCCTCCCTTCTTCCCTCCC
TCCTACGCTCCCTCCCCTGGCCGCCTTCACTGCCGCCATGGCCGCGCTTT
TTGTGGGAGCTAACCAACGAACCCTCGAGAACTTCAATAACGTGGTGGTT
GTGGGAGTAGTCGCCTGTTTCGCTGCCCTCCTCCTCGCAGGCACCAGCAC
CGTCGATCCCTCCCTATACAACCACGTGGATTTTGGCGCGCTGCAGGATG
TAGTGCCAGTAGCCATGTGCGCTCTCGTCTTCCAAAATGTCGTTCCCGTC
GTCGCTGCCAACCTCAACTTCGACCGAGCCAAGGTTATGTCCGCTATCCT
CCTGGGCAGTGGGATGCCGGCCTTCATGTACCTGACGTGGAATGCCATGA
TTCTGGGTAATGTTCACTTGGACTCCCTGGGCGAGCACGGCCTCGATCTC
TACAGCCTCCTCGGAGGGGGGGAAGCGCGCCTGGGCGCCATCGCTACCTC
CTTCATTGGATGCATCCTCTCCATCGTCGAGGAGTTCGCGGAATTCGGCC
GCTCCTTCCAAACCACCGCTCCCACCCGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCTCCCTGGAGGGAGAGGGGGATGCTATCACCCTGCTTGC
CGCCGCCACCATGACCCATCCCTCCCCTCCCTCCCTCCCTTCCTCGCTCT
TCGAGGAGGAGGAGAAGGAGGTAGCCGCAGCCGCTGCTGCTGCAGCACCA
GCAGTGGAAGGAGGACGAGAAACATCTCTCTCAAAAGCCAATTCGCAGGA
GGGAGGAGGGGTTGGGAACAAGCTTCCGATGCTCGCCTTGATCCTCCTCC
CTCCCCTCCTCTTTGCCACCCTCTATCCCGACGGCTTTTTGGGGGCCATT
GAGACAAGTGGTGGTTTCGGCGATCCCTTCCTCTTCGGTATCCTCCCCGT
CGTCATGGCGTGGCGCCAACGGTACTCGGGTCCACAACCCGGAAAGAACG
CGGAAGGAGGGGATCTGGTGGAGCCCCTCGTGCCCGGCGGTAAATGGGGT
CTGCTTGGTCTCGGTGCATTTGCGGGGGCCATGCTCTTGAACAAGGCGGT
CGACACGGCGCCGGATGTGCTGTCGCTGTGGCAGCAGGGGGTGGAGGTGG
CTGTGCACTCGCTGAATGGCGTGGCGCCCGCTTAAAAAATACAGAGAGGA
AAGGAGAAGAGAGAAGGTTGAGTGAGGAGGAAGGGATGGAGTAGGATGAT
ATTAGTGGCTTCATTTAAGTAAAAACCGGAAGAGAGCGATAAGGGGGTAG
AGGGAAACGGACGAGGTATAAATAGGGATGTAGGTAAATGTAGCATTAAC
AGCAGCGGCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGCAGCAGTAG
TACTCGTAGTAAAAAACAAGAGGTAGGGGGAAAGAGAATCGCAGGGAGCG
TCTCGTGCATCCCGTAGCTCTTGTTGAGGAGGTTATTGTCTTAATTGCCG
TGGCCGAGAGTGTGGCCTGAAATGTGGATGCATCGGAACCCCCCCTTATT
CGTTAAATCGTGATTGTGTAGGCAGCACTTCAGCAGCCGTGTTCTCCATT
TATGTCATCTCCGCGCCTTGGGAAGCAGTCCAGTGATCAGTGTCAAGGGA
GTCGAACAAGTCGACTATGTGAAAAGGCAGTCGGTCGTCAGTGGACGTGT
TGATTGAGGAAGGGGGAAAGACGGGAAGGATGGCATGTAGAATGAATGGA
AGTAAGTCAAGTAAAAAAAAGAGAAACGACGAGAAATTCTTTGGTGTCGA
ATCAAGTAAATAGGAAGAGGGAGGAACAGAGAGGAACAGAGAGGAACGTA
TCTTTTGTCTCCGGGTAGGGTACGGCGATCTTGCACCGCAATAAAAAAAC
GAGAGCGGGGCTGGAGCATGAGTGAGAGACAATGCCAGCAGCGACATCTG
TGCTATTTTTGTTGTTAAATGCCACGGTAAATATATTATATATATATATA
CATTTACATATGTGTATGTATGTACATGTATATATAACTCATAAATGTAT
TATATAAGTATAATACATTTATACATAATCGTGTTGTTTTCGACTAGTGA
AATGATAAGTGACTTTTGATGGCTCCCTAGGAAGTTTCCTAGGAATCAAA
CAAGAAGTACGTCTGGGTATGCAAATAAAAAGGCAAAGAAACGATTCAAA
AAATAATTAGAAGAAACGTAAGATTAAAAAAGGCGAGAATGAAAGCCAGC
CAGCCAAGGGATAGAATGTCACCCGACGCATTGGAAAAGGAAGAAGGAAG
GACGGTGACGGTGTGAACCCAC

protein sequence of NO22G02020.1

>NO22G02020.1-protein ID=NO22G02020.1-protein|Name=NO22G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=695bp
MQCNFSSVGAKRNVFMLGCGSLLAAFLLLLSPRSSQALLPFSSTTTNRGR
PLSRPPSLPAFLPAPHQLHSHNPHFPHFHLHPHGSPADEEEERREGGVGR
KGGMASRRGRALFMARDLIDVKGLPKANIMRTNSSAAFALEQEARLKSGP
SFDHLGRGLEDMISELQDLDIKQRMMTMTTAMASALPLPAAGVVSSAALI
AGCMIGAGVLALPSVTVHTGILPSSMAILSVWAYCAASGLLIGEVCINSK
GSSAHASYLKIAGATVGKGLASLAFGVFTIFQYFLLAAYISQGGALLDGF
AHLLPSLHGLALPSSLPPTLPPLAAFTAAMAALFVGANQRTLENFNNVVV
VGVVACFAALLLAGTSTVDPSLYNHVDFGALQDVVPVAMCALVFQNVVPV
VAANLNFDRAKVMSAILLGSGMPAFMYLTWNAMILGNVHLDSLGEHGLDL
YSLLGGGEARLGAIATSFIGCILSIVEEFAEFGRSFQTTAPTRPPSLPPS
LPPSSLEGEGDAITLLAAATMTHPSPPSLPSSLFEEEEKEVAAAAAAAAP
AVEGGRETSLSKANSQEGGGVGNKLPMLALILLPPLLFATLYPDGFLGAI
ETSGGFGDPFLFGILPVVMAWRQRYSGPQPGKNAEGGDLVEPLVPGGKWG
LLGLGAFAGAMLLNKAVDTAPDVLSLWQQGVEVAVHSLNGVAPA*

mRNA from alignment at chr22:616254..621719-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO22G02020.1 ID=NO22G02020.1|Name=NO22G02020.1|organism=Nannochloropsis oceanica|type=mRNA|length=5466bp|location=Sequence derived from alignment at chr22:616254..621719- (Nannochloropsis oceanica)
ATGCAGTGCAATTTTTCGAGCGTGGGGGCCAAGCGGAATGTCTTTATGTT
GGGCTGTGGCAGGTTTGTCAAAAGGGAGGGAGGGAGGGAGGGGGGGAAGA
AACAAGGTGGGGAAGTACTTGGATGTTCATACACCACAGAAAGGTAGAGT
ATTGTTGTTGAATGGATTGGGAAATGAATGGGAGGGGTAAGGCTTACCAG
GTATATGCGATGCGTGATGCATGTGTATATGTAAGTGCACGTTTACGTCC
ATGTGTTATAGAGGTCACATGGGCCGCGCCCCGCCGTTATATCTGCTACT
CACCCTCCCCTCTCCCTTTCCTCCCCATCCTCCCCTCCCTTCCAAACCAC
ATACGCACACATATTACACTAAACGCAATATACACAGCCTACTCGCCGCC
TTTCTCCTCCTCCTCAGCCCCCGCTCCTCCCAAGCTCTCCTCCCCTTCTC
CTCCACCACCACCAACCGGGGCCGCCCTCTTTCCCGCCCTCCCTCCCTCC
CTGCCTTCCTCCCGGCGCCTCACCAGCTCCATTCCCACAATCCCCACTTT
CCTCATTTCCATCTCCATCCCCACGGTTCGCCTGCGGACGAGGAGGAGGA
GCGGAGAGAGGGAGGTGTGGGAAGGAAGGGGGGGATGGCGAGCCGGAGAG
GACGGGCCTTATTCATGGCTCGGGATTTGATCGATGTCAAGGGTGAGGAA
GAAAGGAAGGGAGGGAGGGGGGGGAGGGAGGGATAGGTGGCCCACCTCTG
TGGTCTGCGAAGCTGTCACTACAGCATGCCTGTCGCTAACACCCTTCCCT
CCGTCTTTCCCTCCCTCCCCTCCTTCCCTGGACAGGTCTGCCCAAGGCAA
ACATCATGCGGACAAACAGCTCTGCGGCCTTTGCCCTGGAGCAGGTAGGG
AGGGAGGAAGGGAGGGAGGGATGGAGGGAAGGGAGGAGTCATGGGAGGTA
AAGCGATGACGAACACTCACGGTTGCATAAGTGAACCAAACACTTTGTAA
CCTCTTCCCTCCCTCCCTCTCTCCCTCCCTCCCTTTCCCCCCTCGCCCAG
GAGGCACGATTGAAAAGCGGTCCTTCCTTCGATCACCTAGGGCGAGGCCT
GGAGGACATGATAAGCGAGCTCCAAGATCTGGACATAAAGCAACGGATGA
TGACGATGACGACAGCGATGGCGTCAGCTTTGCCTCTCCCTGCGGCAGGG
GTGGTGAGCAGCGCAGCCTTGATCGCCGGGTGCATGATTGGAGCGGGTGA
GGAAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGCACATGGTAC
ATGATTGCGGTTGGTGAGGAGGAAGGAAGGAAGGGAGGGAGGAAGGTTCC
GAAGCAATACATAGTTTGCTCACCCCTCCCTCCCTCCCTCCCTCCCTCAG
GGGTGCTTGCCCTCCCTTCGGTGACGGTGCACACGGGCATCCTGCCTTCG
TCCATGGCAATATTGAGTGTATGGGCCTACTGCGCTGCCTCCGGCCTCCT
TATTGGGGAGGTGTGCATCAACAGCAAGGGTAGGTAGGGAGGGAGGGAGG
GAGGGAGGTAAGCCCCGGCTTATGATTGCTCACCCCTCCCTCCCTCCCTC
CCTCCCTCCCTTCCTTCCTCCCTTCCTCCCTCAGGATCGAGCGCCCATGC
TTCCTATTTGAAGATCGCGGGGGCGACCGTAGGAAAGGGATTAGCATCCC
TGGCCTTTGGGGTCTTTACTATCTTCCAATACTTCCTCCTCGCCGCGTAT
ATCTCACAGGTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGACCCCC
TCTTGATTCGATCTAACGTGTTCCCGCCACGTCATGCTCACCCCTTCTCC
TCCCCCCTTCTCCCTCCCTCCCTCCCTAGGGCGGTGCCTTGTTGGATGGT
TTTGCCCACCTCCTTCCGAGCCTGCACGGGCTTGCCCTCCCTTCTTCCCT
CCCTCCTACGCTCCCTCCCCTGGCCGCCTTCACTGCCGCCATGGCCGCGC
TTTTTGTGGGAGCTAACCAACGGTACGCCCCCTCCCTCCCTCCCTCCCTC
CCTCCCCCCCTCCCTCCCCCCGTCCCTCGAGCCGACATTTTCACGTCCCT
CCCTCTCCTATCCTACGCCCACCCTCCCCTCCCTCCCTCCATCCCTCAGA
ACCCTCGAGAACTTCAATAACGTGGTGGTTGTGGGAGTAGTCGCCTGTTT
CGCTGCCCTCCTCCTCGCAGGCACCAGCACCGTCGATCCCTCCCTATACA
ACCACGTGGATTTTGGCGCGCTGCAGGTACTTAGGCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCTCTGTCTCTGCAATTTCCCTGTCTCTTT
GTCTATATGCACTCACCACTCACCCTTCCCCCCCCTCTCTTTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCAGGATGTAGTGCCAGTAGCCATGTGCGCTCTCGTC
TTCCAAAATGTCGTTCCCGTCGTCGCTGCCAACCTCAACTTCGACCGAGC
CAAGGTAGGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTTCCTCTCCTTCCAACCTTCCCTCCCTTCCTGCCTCCCTCCCA
CATGGATGACCGGGGAAACCCCCACACCCTCCCTTCCTCTTCTTCCAACC
TTCCCTCCCTTTCTCCCTCCCGCTCTCCCGCCCTTCCTCCCTCAGGTTAT
GTCCGCTATCCTCCTGGGCAGTGGGATGCCGGCCTTCATGTACCTGACGT
GGAATGCCATGATTCTGGGTAGGGAGGGAGGGAGGGAGGGAAGGAGGGAG
GGAGGGAGGGAGGGAAGGAGGGAGGGAGGGACGGGCTGGTCAGAGGGGGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGACCTTCAAGAGAGGA
CCCATCTGGACGACTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCATCCAGGTAATGTTCACTTGGACTCCCTGGGCGAGCACGGCCTCG
ATCTCTACAGCCTCCTCGGAGGGGGGGAAGCGCGGTCGGCCTGACGCTGA
GGGTGTTCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTCGAAGCAG
GGGATGTGGGTTAATGAACCTGTCTCAACCCTTTTTCCCCTCCCTCCCTC
CCTCCCTTCAGCCTGGGCGCCATCGCTACCTCCTTCATTGGATGCATCCT
CTCCATCGTCGAGGAGTTCGCGGAATTCGGCCGCTCCTTCCAAACCACCG
CTCCCACCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCTG
GAGGGAGAGGGGGATGCTATCACCCTGCTTGCCGCCGCCACCATGACCCA
TCCCTCCCCTCCCTCCCTCCCTTCCTCGCTCTTCGAGGAGGAGGAGAAGG
AGGTAGCCGCAGCCGCTGCTGCTGCAGCACCAGCAGTGGAAGGAGGACGA
GAAACATCTCTCTCAAAAGCCAATTCGCAGGAGGGAGGAGGGGTTGGGAA
CAAGCTTCCGATGCTCGCCTTGATCCTCCTCCCTCCCCTCCTCTTTGCCA
CCCTCTATCCCGGTACGTCCTCCCTCCCTCCCTCCCTCCCTCCCTAAGAC
GGACTCCATTCTACGTACCGCGCTCCCACCCACCCTCCCTCCCTCCCTCC
CCCCCTCCCTCAGACGGCTTTTTGGGGGCCATTGAGACAAGTGGTGGTTT
CGGCGATCCCTTCCTCTTCGGTATCCTCCCCGTCGTCATGGCGTGGCGCC
AACGGTACTCGGGTCCACAACCCGGAAAGAACGCGGAAGGAGGGGGTAAG
ACATAAAGACACACCCGCCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTC
ACTTCCCTCTCGTACAACGTTCCCCCCTTGTTGGTATCGATTTGAAATCT
TACTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTCCAGATCTGGTGGAGCCCCTCGTGCCCGGCGG
TAAATGGGGTCTGCTTGGTCTCGGTACGGCAGGGAGGGAGGGAGGGACGG
AGGGAGGGAGGGAGGGAGGATAGGTGCCTGTCGACTCAAAACATAATCGA
GCCATACTTATCACCCTCCTTCTCTCCCTCTCTCTCTCCCTCCCTCCCTC
CCTCCAGGTGCATTTGCGGGGGCCATGCTCTTGAACAAGGCGGTCGACAC
GGCGCCGGATGTGCTGTCGCTGTGGCAGCAGGGGGTGGAGGTGGCTGTGC
ACTCGCTGAATGGCGTGGCGCCCGCTTAAAAAATACAGAGAGGAAAGGAG
AAGAGAGAAGGTTGAGTGAGGAGGAAGGGATGGAGTAGGATGATATTAGT
GGCTTCATTTAAGTAAAAACCGGAAGAGAGCGATAAGGGGGTAGAGGGAA
ACGGACGAGGTATAAATAGGGATGTAGGTAAATGTAGCATTAACAGCAGC
GGCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGCAGCAGTAGTACTCG
TAGTAAAAAACAAGAGGTAGGGGGAAAGAGAATCGCAGGGAGCGTCTCGT
GCATCCCGTAGCTCTTGTTGAGGAGGTTATTGTCTTAATTGCCGTGGCCG
AGAGTGTGGCCTGAAATGTGGATGCATCGGAACCCCCCCTTATTCGTTAA
ATCGTGATTGTGTAGGCAGCACTTCAGCAGCCGTGTTCTCCATTTATGTC
ATCTCCGCGCCTTGGGAAGCAGTCCAGTGATCAGTGTCAAGGGAGTCGAA
CAAGTCGACTATGTGAAAAGGCAGTCGGTCGTCAGTGGACGTGTTGATTG
AGGAAGGGGGAAAGACGGGAAGGATGGCATGTAGAATGAATGGAAGTAAG
TCAAGTAAAAAAAAGAGAAACGACGAGAAATTCTTTGGTGTCGAATCAAG
TAAATAGGAAGAGGGAGGAACAGAGAGGAACAGAGAGGAACGTATCTTTT
GTCTCCGGGTAGGGTACGGCGATCTTGCACCGCAATAAAAAAACGAGAGC
GGGGCTGGAGCATGAGTGAGAGACAATGCCAGCAGCGACATCTGTGCTAT
TTTTGTTGTTAAATGCCACGGTAAATATATTATATATATATATACATTTA
CATATGTGTATGTATGTACATGTATATATAACTCATAAATGTATTATATA
AGTATAATACATTTATACATAATCGTGTTGTTTTCGACTAGTGAAATGAT
AAGTGACTTTTGATGGCTCCCTAGGAAGTTTCCTAGGAATCAAACAAGAA
GTACGTCTGGGTATGCAAATAAAAAGGCAAAGAAACGATTCAAAAAATAA
TTAGAAGAAACGTAAGATTAAAAAAGGCGAGAATGAAAGCCAGCCAGCCA
AGGGATAGAATGTCACCCGACGCATTGGAAAAGGAAGAAGGAAGGACGGT
GACGGTGTGAACCCAC

Coding sequence (CDS) from alignment at chr22:616254..621719-

>NO22G02020.1 ID=NO22G02020.1|Name=NO22G02020.1|organism=Nannochloropsis oceanica|type=CDS|length=2085bp|location=Sequence derived from alignment at chr22:616254..621719- (Nannochloropsis oceanica)
ATGCAGTGCAATTTTTCGAGCGTGGGGGCCAAGCGGAATGTCTTTATGTT
GGGCTGTGGCAGCCTACTCGCCGCCTTTCTCCTCCTCCTCAGCCCCCGCT
CCTCCCAAGCTCTCCTCCCCTTCTCCTCCACCACCACCAACCGGGGCCGC
CCTCTTTCCCGCCCTCCCTCCCTCCCTGCCTTCCTCCCGGCGCCTCACCA
GCTCCATTCCCACAATCCCCACTTTCCTCATTTCCATCTCCATCCCCACG
GTTCGCCTGCGGACGAGGAGGAGGAGCGGAGAGAGGGAGGTGTGGGAAGG
AAGGGGGGGATGGCGAGCCGGAGAGGACGGGCCTTATTCATGGCTCGGGA
TTTGATCGATGTCAAGGGTCTGCCCAAGGCAAACATCATGCGGACAAACA
GCTCTGCGGCCTTTGCCCTGGAGCAGGAGGCACGATTGAAAAGCGGTCCT
TCCTTCGATCACCTAGGGCGAGGCCTGGAGGACATGATAAGCGAGCTCCA
AGATCTGGACATAAAGCAACGGATGATGACGATGACGACAGCGATGGCGT
CAGCTTTGCCTCTCCCTGCGGCAGGGGTGGTGAGCAGCGCAGCCTTGATC
GCCGGGTGCATGATTGGAGCGGGGGTGCTTGCCCTCCCTTCGGTGACGGT
GCACACGGGCATCCTGCCTTCGTCCATGGCAATATTGAGTGTATGGGCCT
ACTGCGCTGCCTCCGGCCTCCTTATTGGGGAGGTGTGCATCAACAGCAAG
GGATCGAGCGCCCATGCTTCCTATTTGAAGATCGCGGGGGCGACCGTAGG
AAAGGGATTAGCATCCCTGGCCTTTGGGGTCTTTACTATCTTCCAATACT
TCCTCCTCGCCGCGTATATCTCACAGGGCGGTGCCTTGTTGGATGGTTTT
GCCCACCTCCTTCCGAGCCTGCACGGGCTTGCCCTCCCTTCTTCCCTCCC
TCCTACGCTCCCTCCCCTGGCCGCCTTCACTGCCGCCATGGCCGCGCTTT
TTGTGGGAGCTAACCAACGAACCCTCGAGAACTTCAATAACGTGGTGGTT
GTGGGAGTAGTCGCCTGTTTCGCTGCCCTCCTCCTCGCAGGCACCAGCAC
CGTCGATCCCTCCCTATACAACCACGTGGATTTTGGCGCGCTGCAGGATG
TAGTGCCAGTAGCCATGTGCGCTCTCGTCTTCCAAAATGTCGTTCCCGTC
GTCGCTGCCAACCTCAACTTCGACCGAGCCAAGGTTATGTCCGCTATCCT
CCTGGGCAGTGGGATGCCGGCCTTCATGTACCTGACGTGGAATGCCATGA
TTCTGGGTAATGTTCACTTGGACTCCCTGGGCGAGCACGGCCTCGATCTC
TACAGCCTCCTCGGAGGGGGGGAAGCGCGCCTGGGCGCCATCGCTACCTC
CTTCATTGGATGCATCCTCTCCATCGTCGAGGAGTTCGCGGAATTCGGCC
GCTCCTTCCAAACCACCGCTCCCACCCGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCTCCCTGGAGGGAGAGGGGGATGCTATCACCCTGCTTGC
CGCCGCCACCATGACCCATCCCTCCCCTCCCTCCCTCCCTTCCTCGCTCT
TCGAGGAGGAGGAGAAGGAGGTAGCCGCAGCCGCTGCTGCTGCAGCACCA
GCAGTGGAAGGAGGACGAGAAACATCTCTCTCAAAAGCCAATTCGCAGGA
GGGAGGAGGGGTTGGGAACAAGCTTCCGATGCTCGCCTTGATCCTCCTCC
CTCCCCTCCTCTTTGCCACCCTCTATCCCGACGGCTTTTTGGGGGCCATT
GAGACAAGTGGTGGTTTCGGCGATCCCTTCCTCTTCGGTATCCTCCCCGT
CGTCATGGCGTGGCGCCAACGGTACTCGGGTCCACAACCCGGAAAGAACG
CGGAAGGAGGGGATCTGGTGGAGCCCCTCGTGCCCGGCGGTAAATGGGGT
CTGCTTGGTCTCGGTGCATTTGCGGGGGCCATGCTCTTGAACAAGGCGGT
CGACACGGCGCCGGATGTGCTGTCGCTGTGGCAGCAGGGGGTGGAGGTGG
CTGTGCACTCGCTGAATGGCGTGGCGCCCGCTTAA

Synonyms

Publications