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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr22 | genome | chr22:601607..604362 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G01990.2 ID=NO22G01990.2|Name=NO22G01990.2|organism=Nannochloropsis oceanica|type=mRNA|length=1881bp
CAGCAGAAGCCGGAGGAAGACGTACATGCAGCTATCTTGAACTCATGCCG
GCACGCCAACCGCAGCGGCCATACCACCGACCAGGCCTTGGCCTCCTCCT
GGTGTGTCTACTCAATACCTCCTATGCCTTTTTTCGCCATTCAACCACCA
CCACGCTTGGAAGCAGCAGTATCGTCAGCACTGACGTTGTCCGACAGCAA
CAGAGGGCTATGTGTAACGTGGCTTTAGCGGCCGGCAAGAAGAAGCAGGC
CTGGACGCCGCCCGAGAACGAATTCTCACGGACCATCGAGTTGGACGACG
TCATGCGCCGCCCCACCCTCCTCAAGGTACAAGCGAACGAGGAAGAGAGG
AGGAAGCTGGCCGAGCGATTTGAATTTTTAAATCTGCACACGCTGACGGC
CAACGTCTCGATTGCCAGGCCCCATTGGGGGTGCCTCCTTGCGGAGGGAA
GCCTCTCCGCATCACTGGACCGTCACTGCGTAGTAACGGGCGAGCTGTTT
CCGTTTGAATTTACGACAACGTTTTCCACTTATATCAAGGAGGTGGGCGG
TGCCGTCCCTCTCTACGGGAATAGCCAGCAGGAGGAGTTCGGGCAGGGCG
CGAACGACATGGAGGAAGATGACTTTGATGACGAGGTGGAGGTGAGGGAG
GGAGGCAGGGAGGGAGGGAGGGAAGGAGTGAGTGATTGTCAACAACATAT
CCTCCCACTCTTTCCCCTTCGCACACGCATGCGGGCCCCTCTTAAAGACT
CCATTTTTTTAAAATACGTCAACCAAAAAAGTAATACATAATGAATAAAA
TAAATCAATGAATGAAAAAAAATGAATTTCAATCAAATGTAATAAAATCA
ACAAATCAATCAATGAAAAAACACACGCACGCACAGGCGGGCACCTCCAT
CGACGTGGGCGAGATCGTGGCGCAGTACCTTTATCTTAATATGCCTCCTT
ACCCCACCCTTCCTGGGAAGAGCCTCGACGATATTCCTGACGAGGTCGTC
TTCGAATGGGGCTCGGGCGATGGGGAGGAAGGGGGGGAAGGAGGACAGGG
GGGAGGAAAGGCTAAGAAGAAGAAAAAAGAGAGGCCAGGGTGGTGAGGAG
GGAGTATCGGGAGGGAGAGAGGGAGGGAGCGAGGGAGGGAGCGAGGGAGG
GAGGGAGAGGGGGTCAAAGAACCAAAAAGGCTCATGTACACGACACGATA
GCGGGCAAGATGGGGAATGCCGGATGGATGGATGGAGGGAGGGATGGAAG
CAGGGAGGGATGACCAAGTCGGTGCTCCATGCCGTTTGTATTTTATGTTT
CTTTGTAGGGGCTGGAGCGCCTAAGTCTTGATATATCTGCGCAAACACGG
CAACATGTCTTTCTTCTTCTCGCTCTCCCTCCCTGCCTCCTTGCCTCCTT
CCCTCCTTTAATTCCTTATTACATAAATGCTCTTCGATCCTCCCTTTCTC
CTTCCCTTACTCCTTCCCTCCCTCCCTCCCTCTGGCCCGTCTACAATGAC
GACGACAAGGAGGAGGAGGAGGAAGGGGAGAGCGCGTTTCCCCCCTCTCT
CCCATCCTCCTGCTTCTGCTCCTGACGTTGCATTCCTCCATCCCTCCCTT
CCTCCCTCTCGCCTTCCTCTTGTCGGGCTACAGCCTCTTGGATGCGTCGA
TAGCGATTGAGAGTTTCGCGGGCCCGGCGGAAGGTGCTGCGCGAGGGAGG
GAGGGCGGGAGAGGGGGAGGGATGGAGGGAGTAAGTTGTGTAGATTTGTT
ATTAATAAGCCGCCATACATGTCACATGGGAGGAGGAAGGGAGGGGGGGA
GGAAGCAAGAGAGGTGAAGGAGGGAATGGAGAGATACACCGACGATTCTC
GAAAGAGAGCAAGCCGAGGGAAGGGTGGGAA back to topprotein sequence of NO22G01990.2 >NO22G01990.2-protein ID=NO22G01990.2-protein|Name=NO22G01990.2|organism=Nannochloropsis oceanica|type=polypeptide|length=249bp
MPARQPQRPYHRPGLGLLLVCLLNTSYAFFRHSTTTTLGSSSIVSTDVVR
QQQRAMCNVALAAGKKKQAWTPPENEFSRTIELDDVMRRPTLLKVQANEE
ERRKLAERFEFLNLHTLTANVSIARPHWGCLLAEGSLSASLDRHCVVTGE
LFPFEFTTTFSTYIKEVGGAVPLYGNSQQEEFGQGANDMEEDDFDDEVEV
REGGREGGREGVSDCQQHILPLFPLRTRMRAPLKDSIFLKYVNQKSNT* back to topmRNA from alignment at chr22:601607..604362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G01990.2 ID=NO22G01990.2|Name=NO22G01990.2|organism=Nannochloropsis oceanica|type=mRNA|length=2756bp|location=Sequence derived from alignment at chr22:601607..604362- (Nannochloropsis oceanica)
CAGCAGAAGCCGGAGGAAGACGTACATGCAGCTATCTTGAACTCATGCCG
GCACGCCAACCGCAGCGGCCATACCACCGACCAGGCCTTGGCCTCCTCCT
GGTGTGTCTACTCAATACCTCCTATGCCTTTTTTCGCCATTCAACCACCA
CCACGCTTGGAAGCAGCAGTATCGTCAGCACTGACGTTGTCCGACAGCAA
CAGAGGGCTATGTGTAACGTGGCTTTAGCGGTAAGAGAAGGGAAAGAGGG
GGATGCGAAATGTAATGGAAGGGTAGGGCGCTTGTGGGCGGCACCGGGGG
TTGGTCCTCAATGTGTCTTCCTCTTCCTCGTCCTAGTGCATCTACATCGT
CAATTGGGAGAATTCCACCATTTAGGAGCCGTAGATGACTTATTTTGCTC
ATTTGAGCATGAAGACTGCGAAAACGGGGTCAGTATCTCGCGTACTGCGT
CCCCTTCCCCCATCCCACACACGCGTTCATCACTCGCCCCTCACTCCTTT
TCCTCCATCCCACCACCTTCATGTACACACACACAGGCCGGCAAGAAGAA
GCAGGCCTGGACGCCGCCCGAGAACGAATTCTCACGGACCATCGAGTGAG
CACAACACCCTCCCTCCCTCCCTCCCTTTCTCCCTTCCTTCCTCCTTCCC
TTCCTCCCTCCCTCTTCCTTTCCGTTCTGACATTTGTAAAAGATGTGGAG
ACCGTCCATTTTTGAGCTCTGAGACGATTGAAAAAAAAGAGGAAAGTCAC
TGGATGATCTTCATGAACTCCACATTGACCCCGTTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCCAGGTTGGACGACGTCATGCGCCGCCCCACCCTC
CTCAAGGTACAAGCGAACGAGGAAGAGAGGAGGAAGCTGGCCGAGCGATT
TGAATTTTTAAATCTGCACACGCTGACGGCCAACGTCTCGATTGCCAGGC
CCCATTGGGGGTAAGGAGGGAAGGAGGGAGGGAGGGAGGGAAGGACGACG
AACATGGCGCAAGATTTCGTTTCCCTTATTCTTCCTCGCTACCCTCCCTC
CTTCTCTCTCTCCCTCACTCAGGTGCCTCCTTGCGGAGGGAAGCCTCTCC
GCATCACTGGACCGTCACTGCGTAGTAACGGGCGAGCTGTTTCCGTTTGA
ATTTACGACAACGTTTTCCACTTATATCAAGGTGAGGGAGGGCGGGAGGG
CGGGAGGGCGGGAGGGGGGGAAGAAGGGCGGGATGGAGGGAGGGTGGGTT
AGTCGAGAGGTTCTGGCCTTCAGACCACGCGAATCATTCACCTTCTTCAC
GTTGGTCTCGTTACCTTATGTTCTTCCACGATCACCCCATTTCCCACTCA
CTTATTCTTCCCTCCTTCCCTCCCTCCCTCCATCCCTTCCTCCGTCCCTC
CCTCCCTTCGTCAGGAGGTGGGCGGTGCCGTCCCTCTCTACGGGAATAGC
CAGCAGGAGGAGTTCGGGCAGGGCGCGAACGACATGGAGGAAGATGACTT
TGATGACGAGGTGGAGGTGAGGGAGGGAGGCAGGGAGGGAGGGAGGGAAG
GAGTGAGTGATTGTCAACAACATATCCTCCCACTCTTTCCCCTTCGCACA
CGCATGCGGGCCCCTCTTAAAGACTCCATTTTTTTAAAATACGTCAACCA
AAAAAGTAATACATAATGAATAAAATAAATCAATGAATGAAAAAAAATGA
ATTTCAATCAAATGTAATAAAATCAACAAATCAATCAATGAAAAAACACA
CGCACGCACAGGCGGGCACCTCCATCGACGTGGGCGAGATCGTGGCGCAG
TACCTTTATCTTAATATGCCTCCTTACCCCACCCTTCCTGGGAAGAGCCT
CGACGATATTCCTGACGAGGTCGTCTTCGAATGGGGCTCGGGCGATGGGG
AGGAAGGGGGGGAAGGAGGACAGGGGGGAGGAAAGGCTAAGAAGAAGAAA
AAAGAGAGGCCAGGGTGGTGAGGAGGGAGTATCGGGAGGGAGAGAGGGAG
GGAGCGAGGGAGGGAGCGAGGGAGGGAGGGAGAGGGGGTCAAAGAACCAA
AAAGGCTCATGTACACGACACGATAGCGGGCAAGATGGGGAATGCCGGAT
GGATGGATGGAGGGAGGGATGGAAGCAGGGAGGGATGACCAAGTCGGTGC
TCCATGCCGTTTGTATTTTATGTTTCTTTGTAGGGGCTGGAGCGCCTAAG
TCTTGATATATCTGCGCAAACACGGCAACATGTCTTTCTTCTTCTCGCTC
TCCCTCCCTGCCTCCTTGCCTCCTTCCCTCCTTTAATTCCTTATTACATA
AATGCTCTTCGATCCTCCCTTTCTCCTTCCCTTACTCCTTCCCTCCCTCC
CTCCCTCTGGCCCGTCTACAATGACGACGACAAGGAGGAGGAGGAGGAAG
GGGAGAGCGCGTTTCCCCCCTCTCTCCCATCCTCCTGCTTCTGCTCCTGA
CGTTGCATTCCTCCATCCCTCCCTTCCTCCCTCTCGCCTTCCTCTTGTCG
GGCTACAGCCTCTTGGATGCGTCGATAGCGATTGAGAGTTTCGCGGGCCC
GGCGGAAGGTGCTGCGCGAGGGAGGGAGGGCGGGAGAGGGGGAGGGATGG
AGGGAGTAAGTTGTGTAGATTTGTTATTAATAAGCCGCCATACATGTCAC
ATGGGAGGAGGAAGGGAGGGGGGGAGGAAGCAAGAGAGGTGAAGGAGGGA
ATGGAGAGATACACCGACGATTCTCGAAAGAGAGCAAGCCGAGGGAAGGG
TGGGAA back to topCoding sequence (CDS) from alignment at chr22:601607..604362- >NO22G01990.2 ID=NO22G01990.2|Name=NO22G01990.2|organism=Nannochloropsis oceanica|type=CDS|length=747bp|location=Sequence derived from alignment at chr22:601607..604362- (Nannochloropsis oceanica)
ATGCCGGCACGCCAACCGCAGCGGCCATACCACCGACCAGGCCTTGGCCT
CCTCCTGGTGTGTCTACTCAATACCTCCTATGCCTTTTTTCGCCATTCAA
CCACCACCACGCTTGGAAGCAGCAGTATCGTCAGCACTGACGTTGTCCGA
CAGCAACAGAGGGCTATGTGTAACGTGGCTTTAGCGGCCGGCAAGAAGAA
GCAGGCCTGGACGCCGCCCGAGAACGAATTCTCACGGACCATCGAGTTGG
ACGACGTCATGCGCCGCCCCACCCTCCTCAAGGTACAAGCGAACGAGGAA
GAGAGGAGGAAGCTGGCCGAGCGATTTGAATTTTTAAATCTGCACACGCT
GACGGCCAACGTCTCGATTGCCAGGCCCCATTGGGGGTGCCTCCTTGCGG
AGGGAAGCCTCTCCGCATCACTGGACCGTCACTGCGTAGTAACGGGCGAG
CTGTTTCCGTTTGAATTTACGACAACGTTTTCCACTTATATCAAGGAGGT
GGGCGGTGCCGTCCCTCTCTACGGGAATAGCCAGCAGGAGGAGTTCGGGC
AGGGCGCGAACGACATGGAGGAAGATGACTTTGATGACGAGGTGGAGGTG
AGGGAGGGAGGCAGGGAGGGAGGGAGGGAAGGAGTGAGTGATTGTCAACA
ACATATCCTCCCACTCTTTCCCCTTCGCACACGCATGCGGGCCCCTCTTA
AAGACTCCATTTTTTTAAAATACGTCAACCAAAAAAGTAATACATAA back to top
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