NO22G01590.1, NO22G01590.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G01590.1
Unique NameNO22G01590.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1239
Alignment locationchr22:468288..469526 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:468288..469526 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO22G01590.1 vs.
Match: EWM21517.1 (gluconolactonase [Nannochloropsis gaditana])

HSP 1 Score: 536.6 bits (1381), Expect = 6.900e-149
Identity = 277/415 (66.75%), Postives = 320/415 (77.11%), Query Frame = 0 
Query:    1 MNRRPSLGSVERVKPAAIDTLIAPDACLEVIAEGNLWAEGPLWVTDKDDSVDGGFLLWSDVKKNRIYRWEEGGGLFTIGKSVYLEESGCR-----------------FSPADNSSSSSV--RDAARCAALREPGSNGLALEPGTGLVVMCMHGGRRVARLETNGTFTPLATHYKGRKLNSPNDLVFGPGGDLYFTDPPYGLNGIDGDSERELAISGVYRLSAAAMQKQQQLLQGQGMEGEERGSEEVELVLGGLKRPNGLAFSPDFKKLYVGNSGAENPHWVVVDMDPTTGLRAEGGREGGEVFALAGQFQEE----GK-RVGSPDGMKVDEKGNLWTTGPGGVLILTPSGERVGTILTGKKTGNVAFGGVEKEKGGRGRFLYVCADDVVARIPVLVGPAPAPPLARPAAAAATS 392
            MNRRP LGSVER++P+ ++TLIAPDA LE+IAEGNLWAEGPLWV+D +DS DGGFLLWSDVKKN IYRWEEGGGLFTIG+SV+L+ESGCR                  S +D S S  +   D ARCA LREPGSNGL LEPG+GLVVMC HG RRV+RLE NG+FTPLATHY+GR+LNSPNDLVFGPGGDLYFTDPPYGLNG+D D  REL   GVYR+S  AM++Q        +    RGS EV+LV  GLKRPNGLAFSPDF  LYVG+S AE+PHWVV +MD +TGL    G+EG  VFA A  +QE     GK R+G+PDG+KVDE GN+W TGPGGVLI +P GER+GTILTGKKTGNVAFGG EK +GG+G FLYVCA+DVVARIP+LV PAP+PP+ R    A+ S
Sbjct:   33 MNRRPLLGSVERLQPSVLNTLIAPDAQLEIIAEGNLWAEGPLWVSD-EDSADGGFLLWSDVKKNLIYRWEEGGGLFTIGRSVFLKESGCRPSLPPLASGGETETKDGNSSSDESCSDGICGDDGARCATLREPGSNGLTLEPGSGLVVMCEHGERRVSRLEANGSFTPLATHYQGRRLNSPNDLVFGPGGDLYFTDPPYGLNGLDADPARELESFGVYRVSKEAMEQQ--------VVSSARGSAEVQLVFDGLKRPNGLAFSPDFTHLYVGDSDAEDPHWVVFEMDASTGL--VKGKEGARVFADARAYQERDDAGGKTRIGNPDGLKVDEDGNIWATGPGGVLIFSPQGERLGTILTGKKTGNVAFGGKEKSRGGKGMFLYVCANDVVARIPILVRPAPSPPMKRVVEEASRS 436
The following BLAST results are available for this feature:
BLAST of NO22G01590.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21517.16.900e-14966.75gluconolactonase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01590NO22G01590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G01590.1NO22G01590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G01590.1.cds1NO22G01590.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G01590.1 ID=NO22G01590.1|Name=NO22G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=1239bp
ATGAATCGCCGCCCTAGCTTGGGGAGTGTGGAGAGGGTGAAACCTGCGGC
TATCGACACATTGATTGCGCCGGATGCCTGTTTGGAAGTGATTGCCGAGG
GGAATCTATGGGCGGAGGGACCCTTGTGGGTGACGGACAAGGACGACAGT
GTGGATGGTGGGTTCTTACTGTGGAGCGACGTGAAGAAGAATCGGATCTA
TCGGTGGGAGGAGGGCGGCGGCTTGTTTACGATTGGAAAGAGTGTGTATT
TGGAGGAAAGTGGCTGTCGGTTCTCACCAGCTGATAATAGCAGCAGCAGC
AGTGTTCGTGATGCCGCGCGGTGTGCGGCGTTGCGTGAACCGGGGTCGAA
TGGCCTGGCTTTGGAACCAGGGACAGGGCTGGTGGTCATGTGCATGCATG
GAGGGAGACGTGTGGCGAGGTTGGAAACGAACGGGACATTCACTCCCTTG
GCAACGCACTACAAGGGGCGGAAATTGAATTCCCCCAACGACCTGGTGTT
TGGGCCTGGGGGGGACCTGTACTTTACCGACCCTCCCTACGGCTTGAATG
GGATAGATGGGGATTCCGAGAGGGAGTTGGCAATAAGTGGTGTCTACCGA
TTGTCGGCAGCGGCCATGCAGAAGCAGCAGCAGTTGCTGCAAGGGCAGGG
GATGGAGGGGGAGGAGAGGGGGAGTGAGGAGGTGGAGTTGGTTTTGGGGG
GGTTGAAGCGACCGAATGGCTTGGCGTTTTCTCCCGACTTTAAGAAGCTG
TATGTCGGGAATAGTGGTGCGGAGAATCCTCATTGGGTTGTCGTAGATAT
GGACCCTACCACAGGTCTCAGAGCCGAGGGTGGGAGGGAGGGAGGGGAGG
TGTTTGCCTTAGCTGGTCAATTCCAAGAGGAGGGAAAGAGGGTTGGAAGC
CCGGATGGAATGAAGGTGGATGAGAAGGGAAATTTGTGGACGACAGGGCC
AGGGGGGGTGTTGATCTTGACGCCTTCGGGAGAGCGGGTGGGGACGATTC
TGACCGGGAAGAAGACGGGAAACGTGGCGTTTGGAGGGGTGGAGAAGGAG
AAGGGGGGAAGGGGGAGGTTTTTGTATGTGTGTGCCGATGATGTGGTGGC
ACGAATTCCGGTTTTGGTGGGCCCGGCGCCGGCTCCGCCGCTGGCAAGAC
CTGCGGCTGCTGCTGCCACCAGTTCGGTGGAGGAGAAGGAGAAGGGGGAG
TGTGCAGAGGCGAATGGGAAGGTCACAGCAGGAGGGTGA
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protein sequence of NO22G01590.1

>NO22G01590.1-protein ID=NO22G01590.1-protein|Name=NO22G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MNRRPSLGSVERVKPAAIDTLIAPDACLEVIAEGNLWAEGPLWVTDKDDS
VDGGFLLWSDVKKNRIYRWEEGGGLFTIGKSVYLEESGCRFSPADNSSSS
SVRDAARCAALREPGSNGLALEPGTGLVVMCMHGGRRVARLETNGTFTPL
ATHYKGRKLNSPNDLVFGPGGDLYFTDPPYGLNGIDGDSERELAISGVYR
LSAAAMQKQQQLLQGQGMEGEERGSEEVELVLGGLKRPNGLAFSPDFKKL
YVGNSGAENPHWVVVDMDPTTGLRAEGGREGGEVFALAGQFQEEGKRVGS
PDGMKVDEKGNLWTTGPGGVLILTPSGERVGTILTGKKTGNVAFGGVEKE
KGGRGRFLYVCADDVVARIPVLVGPAPAPPLARPAAAAATSSVEEKEKGE
CAEANGKVTAGG*
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mRNA from alignment at chr22:468288..469526+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G01590.1 ID=NO22G01590.1|Name=NO22G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=1239bp|location=Sequence derived from alignment at chr22:468288..469526+ (Nannochloropsis oceanica)
ATGAATCGCCGCCCTAGCTTGGGGAGTGTGGAGAGGGTGAAACCTGCGGC
TATCGACACATTGATTGCGCCGGATGCCTGTTTGGAAGTGATTGCCGAGG
GGAATCTATGGGCGGAGGGACCCTTGTGGGTGACGGACAAGGACGACAGT
GTGGATGGTGGGTTCTTACTGTGGAGCGACGTGAAGAAGAATCGGATCTA
TCGGTGGGAGGAGGGCGGCGGCTTGTTTACGATTGGAAAGAGTGTGTATT
TGGAGGAAAGTGGCTGTCGGTTCTCACCAGCTGATAATAGCAGCAGCAGC
AGTGTTCGTGATGCCGCGCGGTGTGCGGCGTTGCGTGAACCGGGGTCGAA
TGGCCTGGCTTTGGAACCAGGGACAGGGCTGGTGGTCATGTGCATGCATG
GAGGGAGACGTGTGGCGAGGTTGGAAACGAACGGGACATTCACTCCCTTG
GCAACGCACTACAAGGGGCGGAAATTGAATTCCCCCAACGACCTGGTGTT
TGGGCCTGGGGGGGACCTGTACTTTACCGACCCTCCCTACGGCTTGAATG
GGATAGATGGGGATTCCGAGAGGGAGTTGGCAATAAGTGGTGTCTACCGA
TTGTCGGCAGCGGCCATGCAGAAGCAGCAGCAGTTGCTGCAAGGGCAGGG
GATGGAGGGGGAGGAGAGGGGGAGTGAGGAGGTGGAGTTGGTTTTGGGGG
GGTTGAAGCGACCGAATGGCTTGGCGTTTTCTCCCGACTTTAAGAAGCTG
TATGTCGGGAATAGTGGTGCGGAGAATCCTCATTGGGTTGTCGTAGATAT
GGACCCTACCACAGGTCTCAGAGCCGAGGGTGGGAGGGAGGGAGGGGAGG
TGTTTGCCTTAGCTGGTCAATTCCAAGAGGAGGGAAAGAGGGTTGGAAGC
CCGGATGGAATGAAGGTGGATGAGAAGGGAAATTTGTGGACGACAGGGCC
AGGGGGGGTGTTGATCTTGACGCCTTCGGGAGAGCGGGTGGGGACGATTC
TGACCGGGAAGAAGACGGGAAACGTGGCGTTTGGAGGGGTGGAGAAGGAG
AAGGGGGGAAGGGGGAGGTTTTTGTATGTGTGTGCCGATGATGTGGTGGC
ACGAATTCCGGTTTTGGTGGGCCCGGCGCCGGCTCCGCCGCTGGCAAGAC
CTGCGGCTGCTGCTGCCACCAGTTCGGTGGAGGAGAAGGAGAAGGGGGAG
TGTGCAGAGGCGAATGGGAAGGTCACAGCAGGAGGGTGA
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Coding sequence (CDS) from alignment at chr22:468288..469526+

>NO22G01590.1 ID=NO22G01590.1|Name=NO22G01590.1|organism=Nannochloropsis oceanica|type=CDS|length=1239bp|location=Sequence derived from alignment at chr22:468288..469526+ (Nannochloropsis oceanica)
ATGAATCGCCGCCCTAGCTTGGGGAGTGTGGAGAGGGTGAAACCTGCGGC
TATCGACACATTGATTGCGCCGGATGCCTGTTTGGAAGTGATTGCCGAGG
GGAATCTATGGGCGGAGGGACCCTTGTGGGTGACGGACAAGGACGACAGT
GTGGATGGTGGGTTCTTACTGTGGAGCGACGTGAAGAAGAATCGGATCTA
TCGGTGGGAGGAGGGCGGCGGCTTGTTTACGATTGGAAAGAGTGTGTATT
TGGAGGAAAGTGGCTGTCGGTTCTCACCAGCTGATAATAGCAGCAGCAGC
AGTGTTCGTGATGCCGCGCGGTGTGCGGCGTTGCGTGAACCGGGGTCGAA
TGGCCTGGCTTTGGAACCAGGGACAGGGCTGGTGGTCATGTGCATGCATG
GAGGGAGACGTGTGGCGAGGTTGGAAACGAACGGGACATTCACTCCCTTG
GCAACGCACTACAAGGGGCGGAAATTGAATTCCCCCAACGACCTGGTGTT
TGGGCCTGGGGGGGACCTGTACTTTACCGACCCTCCCTACGGCTTGAATG
GGATAGATGGGGATTCCGAGAGGGAGTTGGCAATAAGTGGTGTCTACCGA
TTGTCGGCAGCGGCCATGCAGAAGCAGCAGCAGTTGCTGCAAGGGCAGGG
GATGGAGGGGGAGGAGAGGGGGAGTGAGGAGGTGGAGTTGGTTTTGGGGG
GGTTGAAGCGACCGAATGGCTTGGCGTTTTCTCCCGACTTTAAGAAGCTG
TATGTCGGGAATAGTGGTGCGGAGAATCCTCATTGGGTTGTCGTAGATAT
GGACCCTACCACAGGTCTCAGAGCCGAGGGTGGGAGGGAGGGAGGGGAGG
TGTTTGCCTTAGCTGGTCAATTCCAAGAGGAGGGAAAGAGGGTTGGAAGC
CCGGATGGAATGAAGGTGGATGAGAAGGGAAATTTGTGGACGACAGGGCC
AGGGGGGGTGTTGATCTTGACGCCTTCGGGAGAGCGGGTGGGGACGATTC
TGACCGGGAAGAAGACGGGAAACGTGGCGTTTGGAGGGGTGGAGAAGGAG
AAGGGGGGAAGGGGGAGGTTTTTGTATGTGTGTGCCGATGATGTGGTGGC
ACGAATTCCGGTTTTGGTGGGCCCGGCGCCGGCTCCGCCGCTGGCAAGAC
CTGCGGCTGCTGCTGCCACCAGTTCGGTGGAGGAGAAGGAGAAGGGGGAG
TGTGCAGAGGCGAATGGGAAGGTCACAGCAGGAGGGTGA
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Synonyms
Publications