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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr22 | genome | chr22:450007..453737 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO22G01530.1 vs.
Match: EWM21462.1 (glycerophosphoryl diester phosphodiesterase [Nannochloropsis gaditana]) HSP 1 Score: 292.0 bits (746), Expect = 4.700e-75 Identity = 138/172 (80.23%), Postives = 154/172 (89.53%), Query Frame = 0
Query: 181 MIELDVCIDRSGDLVVHHDRYLPDGRLLDTLTLPEIRRVAPEVEPLSRVLRELVRSGVTLYLDVKSDRVVAPLMRLLHGAILRGGWEARRLLIASFNQYDMIEVNAHRLAYPATLGTVQTCIIVDGVPISFAREYAALGVTWCSIGDGCVLPSFLEDAHTRGIGVMVWTVNN 353
MIELDVC+DRSG+++VHHDRYLPDGRLL+ L L +I+RV P VEPL+RVL +L SGV+LYLD+K+DRVVAPLMRLLH AI + GW RLL+ASFNQYDMIEVNAHRLAYPATL +QTCIIVDGVPISFA+EYAALGV WCSIGDGCVLPSFLEDAH RGIGVMVWTVNN
Sbjct: 1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G01530.1 ID=NO22G01530.1|Name=NO22G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3091bp ATGGGACCCAACAAGCAACGAGAGGAGGAGGCACTCATGTATAACCGCAG CAGCAGTAGTACGGCCAGCATTGGCGCTGGAGAGAAGGAGGAACAGGAGT TAGCGTCGTTACAAAATCTGGACCCCTTGCCTCCCATAGTCTTGGGATTG CTTTACGCGCTTTTGCCCACGCCTTCCCTTTTGGCCTTGAGGTGTTGTAG CAAGGCCCACCTCGTACGCTTTCACGACGGGGTCAACTGGGAGCCGGTAT CTCAACGTTTGGTAGTCGAGCTACATGCTTCGCGTCTCCGGCTTGAGACG GCCTCGGATGTTTGTGGGCCCCCTCCGGCCCCCTGGCCACAGGAGGAGGA AGGAATAGAAGGAGGGCCAGATGGTCATGAGCAGCAGCAGCAGCACCATC ACCATCGCCTTGACCATCATCCTCGTCCTCCCCCTCGTTTGGTTCCTCGT CCCTTGGCTGTGGGTCATCGGGGGGCGTGTGGGCACCTGCAAGGCAACTC ACTGGCCTCTTTCCACCATGCCGTTGCCTTGGGCGCGGATATGATTGAGT TGGACGTGTGCATCGACCGGTCGGGGGATTTGGTGGTGCACCACGACCGA TACTTGCCTGATGGTCGCTTGTTGGATACCTTGACATTACCGGAGATTAG GAGAGTGGCGCCGGAAGTGGAGCCCTTGAGTAGGGTGTTGAGGGAGTTAG TGAGGAGTGGGGTAACGCTTTACTTGGACGTCAAATCGGATCGTGTGGTG GCGCCGTTGATGCGGTTGTTGCACGGAGCGATCTTGAGGGGGGGCTGGGA GGCACGCAGGTTGCTCATCGCCAGTTTCAACCAGTATGACATGATCGAAG TGAACGCCCACCGACTCGCCTACCCAGCTACGTTAGGGACCGTGCAGACC TGTATAATTGTTGATGGTGTTCCCATTTCCTTCGCGAGGGAATATGCGGC CCTGGGGGTGACGTGGTGCTCCATAGGCGATGGCTGTGTATTGCCCTCCT TCTTGGAGGACGCGCACACCCGCGGCATTGGCGTCATGGTGTGGACGGTG AATAACCCCAACGTCATGCGGCGCTACGCCGAGCTGGGAGTCGATGCCCT CGTCACTGATTTCCCTGAGCGATTCGTGGCCGTGCGACAAGAAGGGGAAG ATGCCCTACGTGCCGCCCAAGAGGCCTCCACAGCAGCAGCAGTAGCAGCA GCAGCGGCCGCTGCAACGATGGAGGGGGAGCGGAAACGAGGGGGAGAGAT GGGGAGGGAGGAAGAGAAGGCGGGAGGAGATGTATCGCGGGAGGAGGAGG GGAAAGACGAGGAGAAAGAGGAATTGCAGCACGAGATGAGGAGTTGCAGC AGCAAAGGATTCAGCCGGCCTTCCATGTCTTCTGCTTACCCCGCGCCCCT GCACCAACCGCGCAATCGCCTCGTCAATGCCCTCCGACAAGCATGGCCTC TCCTCCGCGCCTTAGAAGGGAGGAGAGGCAACCCTCATACCCACACACCT TCAACCCCTGCTTCCAATCAAGAGAGACGCTCGAAACTCTTGGCCCGGCA GGGGAAAGAGGGAGAGTTGAAGGAAGGGACGGAGGACGGGTTGGTCATGC ACTTGAAGAATGCAGCGAGGCAGGCGGAGGAATCAGCGACGGCGGTGCTG CAGCCACGCTTACCCAGGCGAAGGGTACAGCAGCAGCAGATTTGTATAGA AGAGGAGAGGGATGGCAGTGGAGGTAGGTGTAATTGTGGCAGCAGCAGTG CCGGGGCACCTCAGACGCCGCGGACGCGTATAAAGGACAGTGACAAGGAG GAGGGGGGTGGGAGGGAGGGAGGGGACAAGGAAGGACCGATGACAACGAC GAGAACGACGAAAGGAAAGAGATTTCCCACCTTGGTTGTTATTACGGGGG GGGGGAGGCAGGCAGGGGGAAGGAGAGGCCGACGGCGTATGGGCGCTTGA AGGATGAAGGGGGGAAGGACGATGAGGTGGCGCATGAGTGGCCGTTCCTC CCTTTCGAGCGGACGTGGGCACAGTCGTCGAGGGCCTGAAGGAGGGAGGA GAGAGGGAAGGAGGGCTGGCGTGTGCAGTCTTTCCTGACTTGAATATTCT TCTTGGTTTTCTCGTGTTCCTTTTTAGGGGGGGAGAAGGAAAATGAGATG TAATAATTAAAATTACATTATTAGTAATAGTATGGTAAGAGAAGAGCCGT CAATCAACAGTCGCCACCACCACCAGCAGCAATAGCAGTGGCAGCAGTGG CACTGTCACTTATGCCAGCACGCCGATAACGGTCTTATTTTCAATTTTTG CGAATCAGCAACACCCGCAATGACAGCAGTAGTAATCAGCGGTAGCATCC AGAGAATAAGAATAAAAGGCGACGACAAGAAATGGAAGAGATAGAAGAGA TAGAAGAAGAACAAGAAGAACAAGAAGAAGAAGGAAGGAGAAGGAGACGA GGGGGAAAAGAAGGAGGAGTAGGATCTGGAGGTGAAATTTGCTGCTACGA GAGAGAAAGTGACGGAGACGGAGAAAGGGAAGAATGAGGAGGGGAAAGGG CACGTCGCAAGCGCTCTCTTTCCTCTTACTTTTTCCTCGCTCAACAGTAC TTGTCTTCCTACTGGACTATACCCAAGATAATCCTGTCGTCAACTCTGGC TTCACCCACAACACAGGAGCGAGTGAAAGAGGAAAAGCTTGAAAAGAGAG TTAAACAAACTACAGGTTACACGCACGTCACAGCCCATGTCATCATCATT CTTTTTGGGGATATTGGGCATCCGTTTGTCCTGCATATATTATAAATATT TATACAGAATCAACCGGATCGCTGTAGGATAGAGATGGGGGGAGGGGCAG GCCTTGTGTCGGGTTGCGAGTTCATGTCCACGGGCCCTCACAATGCTTTC AATAGCCTTCATTCACTCACTAGCTGCTGCAGCGGTCAGAAGATAAGAGG AAAGGGAGAGAGGAGAGGAGGAATAGCTGCACAAACTAATGGTATAGGGC GATAGAGAGGAAGGGCGTTAGGGAGAGAGAAGGGAGACTGTGGAGAAGAA ACTCCAAACTATGCTATGGCCACGCCTAAGCAAGGCACTTT back to topprotein sequence of NO22G01530.1 >NO22G01530.1-protein ID=NO22G01530.1-protein|Name=NO22G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp MGPNKQREEEALMYNRSSSSTASIGAGEKEEQELASLQNLDPLPPIVLGL LYALLPTPSLLALRCCSKAHLVRFHDGVNWEPVSQRLVVELHASRLRLET ASDVCGPPPAPWPQEEEGIEGGPDGHEQQQQHHHHRLDHHPRPPPRLVPR PLAVGHRGACGHLQGNSLASFHHAVALGADMIELDVCIDRSGDLVVHHDR YLPDGRLLDTLTLPEIRRVAPEVEPLSRVLRELVRSGVTLYLDVKSDRVV APLMRLLHGAILRGGWEARRLLIASFNQYDMIEVNAHRLAYPATLGTVQT CIIVDGVPISFAREYAALGVTWCSIGDGCVLPSFLEDAHTRGIGVMVWTV NNPNVMRRYAELGVDALVTDFPERFVAVRQEGEDALRAAQEASTAAAVAA AAAAATMEGERKRGGEMGREEEKAGGDVSREEEGKDEEKEELQHEMRSCS SKGFSRPSMSSAYPAPLHQPRNRLVNALRQAWPLLRALEGRRGNPHTHTP STPASNQERRSKLLARQGKEGELKEGTEDGLVMHLKNAARQAEESATAVL QPRLPRRRVQQQQICIEEERDGSGGRCNCGSSSAGAPQTPRTRIKDSDKE EGGGREGGDKEGPMTTTRTTKGKRFPTLVVITGGGRQAGGRRGRRRMGA* back to topmRNA from alignment at chr22:450007..453737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G01530.1 ID=NO22G01530.1|Name=NO22G01530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3731bp|location=Sequence derived from alignment at chr22:450007..453737+ (Nannochloropsis oceanica) ATGGGACCCAACAAGCAACGAGAGGAGGAGGCACTCATGTATAACCGCAG
CAGCAGTAGTACGGCCAGCATTGGCGCTGGAGAGAAGGAGGAACAGGAGT
TAGCGTCGTTACAAAATCTGGACCCCTTGCCTCCCATAGTCTTGGGATTG
CTTTACGCGCTTTTGCCCACGCCTTCCCTTTTGGCCTTGAGGTGTTGTAG
CAAGGTGAGAAGAAGGCTGAGGGATATTGCGTGTTTTTGCATGTGCATGG
ATGAGCAGGAGGGGACAGGTGGAGTGGAAATCTTCGCGAGACAGGAGTTT
CCGATGGAAAAAGAGAAATAGGAAGACGCCTCTGTCAAAATTTGGCCTCG
GTGAGGTGCACAGACGCAACACAGACAATGTATATTCCATCCATTTGGAT
TTGTTGAAAAAAGGAAAAGGATCTGATAGCCGTGCGTCAGAATTCAAATT
CATTAGCACGAATAAGATTTTCACCCCTCCTCCTTCCCTCCTTTCCTCAC
CCGCTCTCAGGCCCACCTCGTACGCTTTCACGACGGGGTCAACTGGGAGC
CGGTATCTCAACGTTTGGTAGTCGAGCTACATGCTTCGCGTCTCCGGCTT
GAGACGGCCTCGGATGTTTGTGGGCCCCCTCCGGCCCCCTGGCCACAGGA
GGAGGAAGGAATAGAAGGAGGGCCAGATGGTCATGAGCAGCAGCAGCAGC
ACCATCACCATCGCCTTGACCATCATCCTCGTCCTCCCCCTCGTTTGGTT
CCTCGTCCCTTGGCTGTGGGTCATCGGGGGGCGTGTGGGCACCTGCAAGG
CAACTCACTGGCCTCTTTCCACCATGCCGTTGCCTTGGGCGCGGATATGA
TTGAGTTGGACGTGTGCATCGACCGGTCGGGGGATTTGGTGGTGCACCAC
GACCGATACTTGCCTGATGGTCGCTTGTTGGATACCTTGACATTACCGGA
GATTAGGAGAGTGGCGCCGGAAGTGGAGCCCTTGAGTAGGGTGTTGAGGG
AGTTAGTGAGGAGTGGGGTAACGCTTTACTTGGACGTCAAATCGGATCGT
GTGGTGGCGCCGTTGATGCGGTTGTTGCACGGAGCGATCTTGAGGGGGGG
CTGGGAGGCACGCAGGTGAGTATTGACGTCTTGCTGGGTTTGTTGTGTCG
GTTGTTCCTGCGCTAACCCCTCTCTCTCCCTCTCCCTTCCTCCCTCCCTT
CTTTCCTTCCTAGGTTGCTCATCGCCAGTTTCAACCAGTATGACATGATC
GAAGTGAACGCCCACCGACTCGCCTACCCAGCTACGTTAGGGACCGTGCA
GACCTGTATAATTGTTGATGGTGTTCCCATTTCCTTCGCGAGGGAATATG
CGGCCCTGGGGGTGACGTGGTGCTCCATAGGCGATGGCTGTGTATTGCCC
TCCTTCTTGGAGGACGCGCACACCCGCGGCATTGGCGTCATGGTGTGGAC
GGTGAATAACCCCAAGTAAGGAGGGTGATGCTGAAGCGAGGGAGTGAGGG
AGGGAAGGAGGGAGTTGGTGGGAAGATAATTTGGTTTAGCGCGATACCAC
TCGTTGTTTGACATGCCTAGGACCATCATCTCCCATCCCTTCCTTCCTCC
TTTTCTCCCTCCCTACGGCGTCATGGGAGGCCGCAATGAGAAGAGAGCAG
ACGCTTCTGTGCCTAATCCCCCCCCTCCTCTCCCTTCCTTTCTCCCTTCA
GCGTCATGCGGCGCTACGCCGAGCTGGGAGTCGATGCCCTCGTCACTGAT
TTCCCTGAGCGATTCGTGGCCGTGCGACAAGAAGGGGAAGATGCCCTACG
TGCCGCCCAAGAGGCCTCCACAGCAGCAGCAGTAGCAGCAGCAGCGGCCG
CTGCAACGATGGAGGGGGAGCGGAAACGAGGGGGAGAGATGGGGAGGGAG
GAAGAGAAGGCGGGAGGAGATGTATCGCGGGAGGAGGAGGGGAAAGACGA
GGAGAAAGAGGAATTGCAGCACGAGATGAGGAGTTGCAGCAGCAAAGGAT
TCAGCCGGCCTTCCATGTCTTCTGCTTACCCCGCGCCCCTGCACCAACCG
CGCAATCGCCTCGTCAATGCCCTCCGACAAGCATGGCCTCTCCTCCGCGC
CTTAGAAGGGAGGAGAGGCAACCCTCATACCCACACACCTTCAACCCCTG
CTTCCAATCAAGAGAGACGCTCGAAACTCTTGGCCCGGCAGGGGAAAGAG
GGAGAGTTGAAGGAAGGGACGGAGGACGGGTTGGTCATGCACTTGAAGAA
TGCAGCGAGGCAGGCGGAGGAATCAGCGACGGCGGTGCTGCAGCCACGCT
TACCCAGGCGAAGGGTACAGCAGCAGCAGATTTGTATAGAAGAGGAGAGG
GATGGCAGTGGAGGTAGGTGTAATTGTGGCAGCAGCAGTGCCGGGGCACC
TCAGACGCCGCGGACGCGTATAAAGGACAGTGACAAGGAGGAGGGGGGTG
GGAGGGAGGGAGGGGACAAGGAAGGACCGATGACAACGACGAGAACGACG
AAAGGAAAGAGATTTCCCACCTTGGTTGTTATTACGGGGGGGGGGAGGCA
GGCAGGGGGAAGGAGAGGCCGACGGCGTATGGGCGCTTGAAGGATGAAGG
GGGGAAGGACGATGAGGTGGCGCATGAGTGGCCGTTCCTCCCTTTCGAGC
GGACGTGGGCACAGTCGTCGAGGGCCTGAAGGAGGGAGGAGAGAGGGAAG
GAGGGCTGGCGTGTGCAGTCTTTCCTGACTTGAATATTCTTCTTGGTTTT
CTCGTGTTCCTTTTTAGGGGGGGAGAAGGAAAATGAGATGTAATAATTAA
AATTACATTATTAGTAATAGTATGGTAAGAGAAGAGCCGTCAATCAACAG
TCGCCACCACCACCAGCAGCAATAGCAGTGGCAGCAGTGGCACTGTCACT
TATGCCAGCACGCCGATAACGGTCTTATTTTCAATTTTTGCGAATCAGCA
ACACCCGCAATGACAGCAGTAGTAATCAGCGGTAGCATCCAGAGAATAAG
AATAAAAGGCGACGACAAGAAATGGAAGAGATAGAAGAGATAGAAGAAGA
ACAAGAAGAACAAGAAGAAGAAGGAAGGAGAAGGAGACGAGGGGGAAAAG
AAGGAGGAGTAGGATCTGGAGGTGAAATTTGCTGCTACGAGAGAGAAAGT
GACGGAGACGGAGAAAGGGAAGAATGAGGAGGGGAAAGGGCACGTCGCAA
GCGCTCTCTTTCCTCTTACTTTTTCCTCGCTCAACAGTACTTGTCTTCCT
ACTGGACTATACCCAAGATAATCCTGTCGTCAACTCTGGCTTCACCCACA
ACACAGGAGCGAGTGAAAGAGGAAAAGCTTGAAAAGAGAGTTAAACAAAC
TACAGGTTACACGCACGTCACAGCCCATGTCATCATCATTCTTTTTGGGG
ATATTGGGCATCCGTTTGTCCTGCATATATTATAAATATTTATACAGAAT
CAACCGGATCGCTGTAGGATAGAGATGGGGGGAGGGGCAGGCCTTGTGTC
GGGTTGCGAGTTCATGTCCACGGGCCCTCACAATGCTTTCAATAGCCTTC
ATTCACTCACTAGCTGCTGCAGCGGTCAGAAGATAAGAGGAAAGGGAGAG
AGGAGAGGAGGAATAGCTGCACAAACTAATGGTATAGGGCGATAGAGAGG
AAGGGCGTTAGGGAGAGAGAAGGGAGACTGTGGAGAAGAAACTCCAAACT
ATGCTATGGCCACGCCTAAGCAAGGCACTTT back to topCoding sequence (CDS) from alignment at chr22:450007..453737+ >NO22G01530.1 ID=NO22G01530.1|Name=NO22G01530.1|organism=Nannochloropsis oceanica|type=CDS|length=1950bp|location=Sequence derived from alignment at chr22:450007..453737+ (Nannochloropsis oceanica) ATGGGACCCAACAAGCAACGAGAGGAGGAGGCACTCATGTATAACCGCAG CAGCAGTAGTACGGCCAGCATTGGCGCTGGAGAGAAGGAGGAACAGGAGT TAGCGTCGTTACAAAATCTGGACCCCTTGCCTCCCATAGTCTTGGGATTG CTTTACGCGCTTTTGCCCACGCCTTCCCTTTTGGCCTTGAGGTGTTGTAG CAAGGCCCACCTCGTACGCTTTCACGACGGGGTCAACTGGGAGCCGGTAT CTCAACGTTTGGTAGTCGAGCTACATGCTTCGCGTCTCCGGCTTGAGACG GCCTCGGATGTTTGTGGGCCCCCTCCGGCCCCCTGGCCACAGGAGGAGGA AGGAATAGAAGGAGGGCCAGATGGTCATGAGCAGCAGCAGCAGCACCATC ACCATCGCCTTGACCATCATCCTCGTCCTCCCCCTCGTTTGGTTCCTCGT CCCTTGGCTGTGGGTCATCGGGGGGCGTGTGGGCACCTGCAAGGCAACTC ACTGGCCTCTTTCCACCATGCCGTTGCCTTGGGCGCGGATATGATTGAGT TGGACGTGTGCATCGACCGGTCGGGGGATTTGGTGGTGCACCACGACCGA TACTTGCCTGATGGTCGCTTGTTGGATACCTTGACATTACCGGAGATTAG GAGAGTGGCGCCGGAAGTGGAGCCCTTGAGTAGGGTGTTGAGGGAGTTAG TGAGGAGTGGGGTAACGCTTTACTTGGACGTCAAATCGGATCGTGTGGTG GCGCCGTTGATGCGGTTGTTGCACGGAGCGATCTTGAGGGGGGGCTGGGA GGCACGCAGGTTGCTCATCGCCAGTTTCAACCAGTATGACATGATCGAAG TGAACGCCCACCGACTCGCCTACCCAGCTACGTTAGGGACCGTGCAGACC TGTATAATTGTTGATGGTGTTCCCATTTCCTTCGCGAGGGAATATGCGGC CCTGGGGGTGACGTGGTGCTCCATAGGCGATGGCTGTGTATTGCCCTCCT TCTTGGAGGACGCGCACACCCGCGGCATTGGCGTCATGGTGTGGACGGTG AATAACCCCAACGTCATGCGGCGCTACGCCGAGCTGGGAGTCGATGCCCT CGTCACTGATTTCCCTGAGCGATTCGTGGCCGTGCGACAAGAAGGGGAAG ATGCCCTACGTGCCGCCCAAGAGGCCTCCACAGCAGCAGCAGTAGCAGCA GCAGCGGCCGCTGCAACGATGGAGGGGGAGCGGAAACGAGGGGGAGAGAT GGGGAGGGAGGAAGAGAAGGCGGGAGGAGATGTATCGCGGGAGGAGGAGG GGAAAGACGAGGAGAAAGAGGAATTGCAGCACGAGATGAGGAGTTGCAGC AGCAAAGGATTCAGCCGGCCTTCCATGTCTTCTGCTTACCCCGCGCCCCT GCACCAACCGCGCAATCGCCTCGTCAATGCCCTCCGACAAGCATGGCCTC TCCTCCGCGCCTTAGAAGGGAGGAGAGGCAACCCTCATACCCACACACCT TCAACCCCTGCTTCCAATCAAGAGAGACGCTCGAAACTCTTGGCCCGGCA GGGGAAAGAGGGAGAGTTGAAGGAAGGGACGGAGGACGGGTTGGTCATGC ACTTGAAGAATGCAGCGAGGCAGGCGGAGGAATCAGCGACGGCGGTGCTG CAGCCACGCTTACCCAGGCGAAGGGTACAGCAGCAGCAGATTTGTATAGA AGAGGAGAGGGATGGCAGTGGAGGTAGGTGTAATTGTGGCAGCAGCAGTG CCGGGGCACCTCAGACGCCGCGGACGCGTATAAAGGACAGTGACAAGGAG GAGGGGGGTGGGAGGGAGGGAGGGGACAAGGAAGGACCGATGACAACGAC GAGAACGACGAAAGGAAAGAGATTTCCCACCTTGGTTGTTATTACGGGGG GGGGGAGGCAGGCAGGGGGAAGGAGAGGCCGACGGCGTATGGGCGCTTGA back to top
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