NO22G01070.1, NO22G01070.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO22G01070.1
Unique Name	NO22G01070.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4341
Alignment location	chr22:332885..337311 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr22	genome	chr22:332885..337311 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO22G01070.1 vs.
Match: EWM21512.1 (n-ethylmaleimide-sensitive fusion protein [Nannochloropsis gaditana])

HSP 1 Score: 1256.9 bits (3251), Expect = 0.000e+0
Identity = 640/732 (87.43%), Postives = 685/732 (93.58%), Query Frame = 0

Query:    1 MDLAIGQQPSNSLAYTNRVYVSLADWDALLARVTNPDASRTGEDALLVSVNGLVFTASYNNGIDTGNLGLNSLQRRFGLFTLMQRVKVDIFESNAGLALTSVVVRVDLLAKGKVKAPVQLATEEMAGILKATYLSQVLQINQSLAWDFNGTKLELTVESFKKLVPGGDSPNAGQMLQPTDVVFTKEKGAMVVLSGANSGAPRDNIINPDFDFGKLGIGGLGNEFNQIFRRAFASRVFPGHIVKQLGINHVRGMLLWGPPGCGKTLIARTIGKILNAHEPKIVNGPEVLDKYVGGSEEKIRALFADAEKEQVEMGDASGLHVIIFDEIDAICKTRGSSRDSTGVSDSIVNQLLSKIDGVNSLNNILVIGMTNRKDMIDEAIIRPGRLEVHVEIGLPDEAGRLQIISIHTKSMRDHKRISPEALDKMAELARATKNFSGAEIEGLVKSAASFAFQRNVNVKDLSKLNEADLVVQWSDFQLAQQEVQPRLGANSEELEVLFRNGIVPYGPAFDSVMMTLRRFVQQVRVSARTPLLSLLLEGAPSTGKTAIAASLGVQSEFPFVRVVSADAMVGFSEAAKCAAILKAFQDSSRSPLSVVILDDLERLIDYSPIGPRFSNTVVQTLLVLLKKPPVSPEKRLMVIGTTSVAAHLEDLQLVQGFNVMLNVPQLTGGEEIKAVLREVVAGLSQKEMDDIASAISKPIGIKQLLMVTEMARQEEETVSTDRFLECLHICGF 733
            MDLA+GQQPSNSLAYTNRVYVS  DW+ LL+RV NP+AS+  +DALL++VNGLVF  S N GI+TGN+GLNSLQRRFG+FTL QRVKVDIFESNAGLALTSV+VRVDLLAKGKVK+P+ LATEEMAG  KA +LSQVLQ  Q +AWDF GTKLEL +ESF+ L+PGG+ PNAGQ+LQPTDVVFTKEKGAMV LSGANSGAPRDNIINPDFDFGKLGIGGLGNEFNQIFRRAFASRVFPGHIVKQLGINHVRGMLLWGPPGCGKTLIARTIGKILNA EPKIVNGPEVLDKYVGGSEE+IR LF DAEKEQ EMGD SGLHVIIFDEIDAICK+RGSSRDSTGVSDSIVNQLLSKIDGVNSLNNILVIGMTNRKDMIDEA++RPGRLEVHVEIGLPDE GRLQIISIHTKSMR+HKRI+PEA+ K+AELARATKN+SGAEIEGLVKSAASFAFQRNVNVKDLS+L E +L+V+W+DFQ A  EV PRLGANSEELEVLFRNGIVPYG +FD++MMTLRRFVQQVRVS RTPLLS+LLEGAPSTGKTAIAASLGVQSEFPFVRVVSADAMVGFSE AKC+AILKAFQDSSRSPLSV++LDDLERLIDYSPIGPRFSNTVVQTLLVLLKKPP SP+KRL+VIGTTSVAAHLEDLQLVQGFNVML VPQLTG EEIK VLREVV  LSQKEMDDI SAIS+PIGIKQLLMVTEMARQ EETVSTDRFLECLHICGF
Sbjct:   41 MDLAVGQQPSNSLAYTNRVYVSHPDWEFLLSRVGNPEASKIEDDALLITVNGLVFAVSPNKGIETGNIGLNSLQRRFGVFTLTQRVKVDIFESNAGLALTSVIVRVDLLAKGKVKSPLLLATEEMAGAFKAAFLSQVLQTQQPVAWDFRGTKLELIIESFQNLIPGGNCPNAGQLLQPTDVVFTKEKGAMVALSGANSGAPRDNIINPDFDFGKLGIGGLGNEFNQIFRRAFASRVFPGHIVKQLGINHVRGMLLWGPPGCGKTLIARTIGKILNAREPKIVNGPEVLDKYVGGSEERIRELFKDAEKEQQEMGDGSGLHVIIFDEIDAICKSRGSSRDSTGVSDSIVNQLLSKIDGVNSLNNILVIGMTNRKDMIDEAVLRPGRLEVHVEIGLPDEEGRLQIISIHTKSMREHKRIAPEAVGKLAELARATKNYSGAEIEGLVKSAASFAFQRNVNVKDLSQLKEEELIVEWADFQRALLEVPPRLGANSEELEVLFRNGIVPYGSSFDAIMMTLRRFVQQVRVSDRTPLLSVLLEGAPSTGKTAIAASLGVQSEFPFVRVVSADAMVGFSETAKCSAILKAFQDSSRSPLSVIVLDDLERLIDYSPIGPRFSNTVVQTLLVLLKKPPTSPDKRLLVIGTTSVAAHLEDLQLVQGFNVMLTVPQLTGPEEIKTVLREVVTSLSQKEMDDITSAISQPIGIKQLLMVTEMARQGEETVSTDRFLECLHICGF 772

The following BLAST results are available for this feature:

BLAST of NO22G01070.1 vs.

BLAST of NO22G01070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21512.1	0.000e+0	87.43	n-ethylmaleimide-sensitive fusion protein [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO22G01070	NO22G01070	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO22G01070.1	NO22G01070.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO22G01070.1.cds1	NO22G01070.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G01070.1.cds2	NO22G01070.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr22:332885..337311-
coding sequence from alignment at chr22:332885..337311-

mRNA sequence

>NO22G01070.1 ID=NO22G01070.1|Name=NO22G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=4341bp
CCACCAAACGAACTCGGCAAACCCCCCCTCCCAGCCCCAACCTTGACGAC
CCCCCCTCCACTGCCGTTAACTTTGCTGCTGCTCATAATTCCTCCATAGA
AAGTTGATGAACAACAAAGCTCAACAGGGTTGGTGCTGTACATGAGGGTA
GAAATGATAACGAGGCTGACTCCGATCACAAACATTGGCGACAGTTGGAC
CTCTCCAAAAAACGTATAGCTCACCAAACACGACACCACGATAGAAATCG
CCGTCGAGAAGCCCTTGAGCAAGCTATCAGCATGCTTTACCACCAATGCC
ACGACAATTCCACCTAGGGCCTGCAGCGCAATGACAGCCCACACAATAGA
AGTATAACCATGGAAAAACCCGTGTTCATTTACCATTGCCGAGTCCGTGT
ACCATACCCCTACCGTCCCGACAATAATCCCAATCAAGGCTAACTCCACA
TTACGCACCCATACCGATACCTCAGAGCCCTTCAGAACTTTCTCGAAATA
GACGCCAGCGAAGCCACTCGAGCAACAGGCCAGGATGACCGAAACCAGGC
CAATCGTTATGTTCCCCGTCGCGGCAGCCACCTCACTGGCTGTACCCCCG
GTCTTCAGGCCCGAGACCTGCACAAGGGAAACACCCCCCACCAAAACAAC
CAAAGAAAGCCACTTGGAGAGGTCGAGGCGCCGGCGGAGGAGGACAACGG
AGAAGATGGCCGTGGTCAAAATTTTGAGCTGGTAAAGGACCTGGTAACTG
GCCGCGTCCAAATTTGAGACAGCAATATAGGCCAAATTATTTTGCAGCGT
GTAAAGGGATGCCGGGATGAGTAGCTTGGCAAAGTCCGCGGGCATGAGTA
CAATTTCATGGTAGAGTTTAGACCAGAGGCCGCTGATACTCCCTTCCTCG
ATGCCGATCAGGCAAGAGGCCGCCACGAGCTTCACGATCTCAGACATGAC
CACGGCCGTGCTGGAGATGTACATGACGTCGCCCCTACTACGGGAATACC
GCATGGTCAAGGCCAGCGTGGAATTTTGCATGACAAGGACCAAAAGTGCC
CCGTACTTGAGCATGTCAGCCCGTTTCATGTCCTTGAAAAGGACGTCCAT
CGCTATAAAGCGGTGGGTGCGGCAGGGAGGGACGAGCTGACAGCGGCAGA
AGGAAAAGCCAGAGGATTTTAAGAGACTGTAGTCGTGTGGTCGATGGCAG
CGCCTGTGGTTTTGTTTTTGTTCGGTTAGTATGGTGGATTTGGTGTTGCC
GTGTTGGTTCCGTGTTGGGCGATGATGGGGCACATGGGGTCGTTGTGCGT
TGTGGGCGCAGCAAGCGTCGTACTACCATGTCTTCTATCCCCGATCCCAA
TCCCACCATAGCAGAGAAAGATGGAGCACTGGCTGCTGGTGGTGTGCTGG
TGGGGCTACTGATGTCAAATTAGATGGGTTGTAGAAATCAGAGAGGGTAC
AACAGAAGAGTATTCCTGTATTATGGGCCTTGTGAGAGGGTTTTCCCCTG
TCCAGCCAAAGCAACCCCAAACTTCTCCCTAGGGGAAAATGCTCGGCTTG
GGGAGTACCTTAGCATGTGTACAATCCTCTGAATTGTTTCAGACAAAGAA
TAGCTTGTGATGACTTCTTATACTTGCCACAATCATTCAGAAGCCTCCAG
CTCTCCAATAATCATGACGACAACGAGAGGGTGCTTTGAGATGCAAGAAG
CTTAACTCCTGGCTTGTTCTTTCCTCCAGCGCTCACGCCGCCCCTGTCGC
ACCCGTCTCAAACCACAGACGACCGCAAGATGGATCTTGCCATTGGGCAG
CAGCCGAGTAATAGCCTGGCCTACACGAACCGAGTGTATGTGAGTCTGGC
CGACTGGGACGCGCTGCTAGCACGCGTGACGAATCCTGATGCAAGCAGGA
CGGGAGAGGACGCTTTGCTGGTGAGCGTGAATGGGCTGGTTTTTACGGCA
AGCTACAACAATGGCATCGACACCGGCAACTTGGGCCTCAACTCCTTGCA
ACGACGCTTTGGGTTGTTTACGCTGATGCAGCGGGTCAAGGTGGACATCT
TTGAGAGTAATGCAGGCCTGGCACTGACTTCAGTGGTGGTACGCGTGGAT
TTGCTTGCCAAGGGGAAGGTCAAGGCGCCCGTGCAACTAGCCACGGAAGA
AATGGCAGGCATCTTGAAAGCCACCTACCTTTCCCAGGTCCTGCAGATAA
ATCAGTCCCTGGCTTGGGATTTCAACGGCACCAAGCTGGAGTTGACGGTG
GAGAGCTTTAAGAAGCTGGTCCCGGGGGGAGATAGCCCAAATGCGGGTCA
GATGCTGCAGCCGACCGATGTAGTGTTCACGAAGGAGAAAGGGGCGATGG
TGGTCTTGTCGGGGGCGAACTCGGGGGCGCCTCGTGATAACATCATCAAT
CCGGATTTTGATTTTGGCAAGCTGGGTATTGGAGGATTGGGGAATGAGTT
TAATCAGATTTTCCGGAGGGCATTCGCATCAAGGGTGTTTCCGGGGCACA
TTGTCAAGCAGTTGGGGATCAACCACGTGAGGGGGATGTTGTTGTGGGGG
CCGCCAGGGTGTGGTAAGACGTTGATTGCCCGTACGATTGGCAAGATTCT
TAATGCGCACGAACCAAAAATCGTTAATGGGCCTGAGGTGCTTGATAAGT
ATGTGGGGGGTTCGGAGGAGAAGATAAGAGCGTTGTTCGCAGACGCGGAA
AAGGAGCAGGTAGAGATGGGGGATGCGAGTGGGTTGCATGTGATAATATT
TGATGAGATTGATGCGATTTGTAAGACTCGGGGGTCAAGTCGGGATAGTA
CGGGGGTATCGGACTCGATCGTAAATCAGTTGTTGTCCAAGATTGATGGG
GTGAACTCGTTGAACAACATTTTGGTGATAGGTATGACGAACCGAAAAGA
CATGATTGATGAGGCCATCATACGGCCCGGTCGTCTAGAAGTGCACGTTG
AAATTGGCTTGCCGGACGAGGCAGGGCGGTTGCAGATCATCTCGATCCAT
ACCAAGAGCATGCGGGACCACAAGAGAATTTCTCCCGAGGCGCTCGACAA
GATGGCGGAGCTCGCGCGGGCGACCAAGAATTTTTCAGGAGCGGAGATCG
AGGGTCTTGTTAAGTCGGCGGCATCCTTTGCATTTCAACGTAATGTGAAT
GTAAAGGATCTGTCGAAGCTAAATGAGGCAGACTTGGTGGTCCAGTGGTC
TGATTTCCAACTAGCCCAGCAAGAGGTCCAGCCTCGCTTGGGAGCCAATT
CAGAGGAGCTGGAAGTGTTATTCCGGAACGGTATCGTCCCCTATGGCCCG
GCTTTTGACTCGGTCATGATGACGCTGAGGAGATTTGTGCAGCAGGTGAG
GGTGTCGGCACGCACACCATTGTTGTCCCTTCTGTTGGAGGGGGCGCCAA
GCACGGGGAAGACGGCTATAGCGGCCTCGCTCGGGGTGCAGAGCGAGTTT
CCGTTTGTCCGGGTGGTGTCGGCGGATGCTATGGTAGGTTTTTCGGAAGC
GGCTAAGTGTGCGGCAATATTGAAAGCTTTTCAGGACAGTTCGAGGTCGC
CGTTGTCGGTTGTGATTTTGGATGATTTGGAAAGGTTGATTGACTACTCT
CCGATCGGTCCCAGGTTTAGTAATACTGTAGTACAGACGCTTTTGGTATT
GTTGAAGAAACCGCCAGTCAGCCCGGAGAAACGATTAATGGTCATTGGAA
CGACGTCGGTGGCGGCACATTTGGAGGACCTGCAGTTGGTGCAAGGTTTC
AATGTCATGTTGAATGTGCCGCAGTTAACGGGGGGGGAGGAGATCAAGGC
GGTGTTGAGGGAGGTGGTGGCCGGACTGTCCCAGAAGGAGATGGATGACA
TTGCCTCTGCAATTAGTAAGCCGATTGGGATCAAGCAGCTATTGATGGTG
ACAGAGATGGCCCGGCAGGAGGAGGAGACGGTGTCGACGGATCGATTTTT
GGAGTGCTTGCATATTTGTGGATTTTAATTCATTCGAGGAGGGATGGAGG
ATGTGGTGTGTGGTTTATGCTGGCGGGGGGCGCACAAAAGGGGAAAAAGG
TTTGACATGAAGTGCAATGTCGAATCAAGGTTGGATAAGAAGTTCTTTGA
CATGCGCAAAGCACTCACACAAGCATCAATCGGAAACTGTAAAGAGGAAG
TGAGGGAGAGAGAGTGGATAACGTGGGAGGGCGGGGAGGAGGAGGACTGG
ACGAAAAAACGGATCAGGTCGTAAAGTTGACGACCTATCAAAGTTGTATG
TACTTTTATATCTATTTGTAGACATATGTAAGAAGAGGAAGAGCGAATTA
AGATGCGCTGAGAAACCGAATTAAGGACAGAACAAAAGGAG

protein sequence of NO22G01070.1

>NO22G01070.1-protein ID=NO22G01070.1-protein|Name=NO22G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=733bp
MDLAIGQQPSNSLAYTNRVYVSLADWDALLARVTNPDASRTGEDALLVSV
NGLVFTASYNNGIDTGNLGLNSLQRRFGLFTLMQRVKVDIFESNAGLALT
SVVVRVDLLAKGKVKAPVQLATEEMAGILKATYLSQVLQINQSLAWDFNG
TKLELTVESFKKLVPGGDSPNAGQMLQPTDVVFTKEKGAMVVLSGANSGA
PRDNIINPDFDFGKLGIGGLGNEFNQIFRRAFASRVFPGHIVKQLGINHV
RGMLLWGPPGCGKTLIARTIGKILNAHEPKIVNGPEVLDKYVGGSEEKIR
ALFADAEKEQVEMGDASGLHVIIFDEIDAICKTRGSSRDSTGVSDSIVNQ
LLSKIDGVNSLNNILVIGMTNRKDMIDEAIIRPGRLEVHVEIGLPDEAGR
LQIISIHTKSMRDHKRISPEALDKMAELARATKNFSGAEIEGLVKSAASF
AFQRNVNVKDLSKLNEADLVVQWSDFQLAQQEVQPRLGANSEELEVLFRN
GIVPYGPAFDSVMMTLRRFVQQVRVSARTPLLSLLLEGAPSTGKTAIAAS
LGVQSEFPFVRVVSADAMVGFSEAAKCAAILKAFQDSSRSPLSVVILDDL
ERLIDYSPIGPRFSNTVVQTLLVLLKKPPVSPEKRLMVIGTTSVAAHLED
LQLVQGFNVMLNVPQLTGGEEIKAVLREVVAGLSQKEMDDIASAISKPIG
IKQLLMVTEMARQEEETVSTDRFLECLHICGF*

mRNA from alignment at chr22:332885..337311-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO22G01070.1 ID=NO22G01070.1|Name=NO22G01070.1|organism=Nannochloropsis oceanica|type=mRNA|length=4427bp|location=Sequence derived from alignment at chr22:332885..337311- (Nannochloropsis oceanica)
CCACCAAACGAACTCGGCAAACCCCCCCTCCCAGCCCCAACCTTGACGAC
CCCCCCTCCACTGCCGTTAACTTTGCTGCTGCTCATAATTCCTCCATAGA
AAGTTGATGAACAACAAAGCTCAACAGGGTTGGTGCTGTACATGAGGGTA
GAAATGATAACGAGGCTGACTCCGATCACAAACATTGGCGACAGTTGGAC
CTCTCCAAAAAACGTATAGCTCACCAAACACGACACCACGATAGAAATCG
CCGTCGAGAAGCCCTTGAGCAAGCTATCAGCATGCTTTACCACCAATGCC
ACGACAATTCCACCTAGGGCCTGCAGCGCAATGACAGCCCACACAATAGA
AGTATAACCATGGAAAAACCCGTGTTCATTTACCATTGCCGAGTCCGTGT
ACCATACCCCTACCGTCCCGACAATAATCCCAATCAAGGCTAACTCCACA
TTACGCACCCATACCGATACCTCAGAGCCCTTCAGAACTTTCTCGAAATA
GACGCCAGCGAAGCCACTCGAGCAACAGGCCAGGATGACCGAAACCAGGC
CAATCGTTATGTTCCCCGTCGCGGCAGCCACCTCACTGGCTGTACCCCCG
GTCTTCAGGCCCGAGACCTGCACAAGGGAAACACCCCCCACCAAAACAAC
CAAAGAAAGCCACTTGGAGAGGTCGAGGCGCCGGCGGAGGAGGACAACGG
AGAAGATGGCCGTGGTCAAAATTTTGAGCTGGTAAAGGACCTGGTAACTG
GCCGCGTCCAAATTTGAGACAGCAATATAGGCCAAATTATTTTGCAGCGT
GTAAAGGGATGCCGGGATGAGTAGCTTGGCAAAGTCCGCGGGCATGAGTA
CAATTTCATGGTAGAGTTTAGACCAGAGGCCGCTGATACTCCCTTCCTCG
ATGCCGATCAGGCAAGAGGCCGCCACGAGCTTCACGATCTCAGACATGAC
CACGGCCGTGCTGGAGATGTACATGACGTCGCCCCTACTACGGGAATACC
GCATGGTCAAGGCCAGCGTGGAATTTTGCATGACAAGGACCAAAAGTGCC
CCGTACTTGAGCATGTCAGCCCGTTTCATGTCCTTGAAAAGGACGTCCAT
CGCTATAAAGCGGTGGGTGCGGCAGGGAGGGACGAGCTGACAGCGGCAGA
AGGAAAAGCCAGAGGATTTTAAGAGACTGTAGTCGTGTGGTCGATGGCAG
CGCCTGTGGTTTTGTTTTTGTTCGGTTAGTATGGTGGATTTGGTGTTGCC
GTGTTGGTTCCGTGTTGGGCGATGATGGGGCACATGGGGTCGTTGTGCGT
TGTGGGCGCAGCAAGCGTCGTACTACCATGTCTTCTATCCCCGATCCCAA
TCCCACCATAGCAGAGAAAGATGGAGCACTGGCTGCTGGTGGTGTGCTGG
TGGGGCTACTGATGTCAAATTAGATGGGTTGTAGAAATCAGAGAGGGTAC
AACAGAAGAGTATTCCTGTATTATGGGCCTTGTGAGAGGGTTTTCCCCTG
TCCAGCCAAAGCAACCCCAAACTTCTCCCTAGGGGAAAATGCTCGGCTTG
GGGAGTACCTTAGCATGTGTACAATCCTCTGAATTGTTTCAGACAAAGAA
TAGCTTGTGATGACTTCTTATACTTGCCACAATCATTCAGAAGCCTCCAG
CTCTCCAATAATCATGACGACAACGAGAGGGTGCTTTGAGATGCAAGAAG
CTTAACTCCTGGCTTGTTCTTTCCTCCAGCGCTCACGCCGCCCCTGTCGC
ACCCGTCTCAAACCACAGACGACCGCAAGATGGATCTTGCCATTGGGCAG
CAGCCGAGTAATAGCCTGGCCTACACGAACCGGTGCGTTGTTGCGTAATG
CACGGAAGGAAGCCGATCCTCATTTTCACTCCCTGCCCCTCCCCTCTCTT
CCGTCCCGTCGTACGCAGAGTGTATGTGAGTCTGGCCGACTGGGACGCGC
TGCTAGCACGCGTGACGAATCCTGATGCAAGCAGGACGGGAGAGGACGCT
TTGCTGGTGAGCGTGAATGGGCTGGTTTTTACGGCAAGCTACAACAATGG
CATCGACACCGGCAACTTGGGCCTCAACTCCTTGCAACGACGCTTTGGGT
TGTTTACGCTGATGCAGCGGGTCAAGGTGGACATCTTTGAGAGTAATGCA
GGCCTGGCACTGACTTCAGTGGTGGTACGCGTGGATTTGCTTGCCAAGGG
GAAGGTCAAGGCGCCCGTGCAACTAGCCACGGAAGAAATGGCAGGCATCT
TGAAAGCCACCTACCTTTCCCAGGTCCTGCAGATAAATCAGTCCCTGGCT
TGGGATTTCAACGGCACCAAGCTGGAGTTGACGGTGGAGAGCTTTAAGAA
GCTGGTCCCGGGGGGAGATAGCCCAAATGCGGGTCAGATGCTGCAGCCGA
CCGATGTAGTGTTCACGAAGGAGAAAGGGGCGATGGTGGTCTTGTCGGGG
GCGAACTCGGGGGCGCCTCGTGATAACATCATCAATCCGGATTTTGATTT
TGGCAAGCTGGGTATTGGAGGATTGGGGAATGAGTTTAATCAGATTTTCC
GGAGGGCATTCGCATCAAGGGTGTTTCCGGGGCACATTGTCAAGCAGTTG
GGGATCAACCACGTGAGGGGGATGTTGTTGTGGGGGCCGCCAGGGTGTGG
TAAGACGTTGATTGCCCGTACGATTGGCAAGATTCTTAATGCGCACGAAC
CAAAAATCGTTAATGGGCCTGAGGTGCTTGATAAGTATGTGGGGGGTTCG
GAGGAGAAGATAAGAGCGTTGTTCGCAGACGCGGAAAAGGAGCAGGTAGA
GATGGGGGATGCGAGTGGGTTGCATGTGATAATATTTGATGAGATTGATG
CGATTTGTAAGACTCGGGGGTCAAGTCGGGATAGTACGGGGGTATCGGAC
TCGATCGTAAATCAGTTGTTGTCCAAGATTGATGGGGTGAACTCGTTGAA
CAACATTTTGGTGATAGGTATGACGAACCGAAAAGACATGATTGATGAGG
CCATCATACGGCCCGGTCGTCTAGAAGTGCACGTTGAAATTGGCTTGCCG
GACGAGGCAGGGCGGTTGCAGATCATCTCGATCCATACCAAGAGCATGCG
GGACCACAAGAGAATTTCTCCCGAGGCGCTCGACAAGATGGCGGAGCTCG
CGCGGGCGACCAAGAATTTTTCAGGAGCGGAGATCGAGGGTCTTGTTAAG
TCGGCGGCATCCTTTGCATTTCAACGTAATGTGAATGTAAAGGATCTGTC
GAAGCTAAATGAGGCAGACTTGGTGGTCCAGTGGTCTGATTTCCAACTAG
CCCAGCAAGAGGTCCAGCCTCGCTTGGGAGCCAATTCAGAGGAGCTGGAA
GTGTTATTCCGGAACGGTATCGTCCCCTATGGCCCGGCTTTTGACTCGGT
CATGATGACGCTGAGGAGATTTGTGCAGCAGGTGAGGGTGTCGGCACGCA
CACCATTGTTGTCCCTTCTGTTGGAGGGGGCGCCAAGCACGGGGAAGACG
GCTATAGCGGCCTCGCTCGGGGTGCAGAGCGAGTTTCCGTTTGTCCGGGT
GGTGTCGGCGGATGCTATGGTAGGTTTTTCGGAAGCGGCTAAGTGTGCGG
CAATATTGAAAGCTTTTCAGGACAGTTCGAGGTCGCCGTTGTCGGTTGTG
ATTTTGGATGATTTGGAAAGGTTGATTGACTACTCTCCGATCGGTCCCAG
GTTTAGTAATACTGTAGTACAGACGCTTTTGGTATTGTTGAAGAAACCGC
CAGTCAGCCCGGAGAAACGATTAATGGTCATTGGAACGACGTCGGTGGCG
GCACATTTGGAGGACCTGCAGTTGGTGCAAGGTTTCAATGTCATGTTGAA
TGTGCCGCAGTTAACGGGGGGGGAGGAGATCAAGGCGGTGTTGAGGGAGG
TGGTGGCCGGACTGTCCCAGAAGGAGATGGATGACATTGCCTCTGCAATT
AGTAAGCCGATTGGGATCAAGCAGCTATTGATGGTGACAGAGATGGCCCG
GCAGGAGGAGGAGACGGTGTCGACGGATCGATTTTTGGAGTGCTTGCATA
TTTGTGGATTTTAATTCATTCGAGGAGGGATGGAGGATGTGGTGTGTGGT
TTATGCTGGCGGGGGGCGCACAAAAGGGGAAAAAGGTTTGACATGAAGTG
CAATGTCGAATCAAGGTTGGATAAGAAGTTCTTTGACATGCGCAAAGCAC
TCACACAAGCATCAATCGGAAACTGTAAAGAGGAAGTGAGGGAGAGAGAG
TGGATAACGTGGGAGGGCGGGGAGGAGGAGGACTGGACGAAAAAACGGAT
CAGGTCGTAAAGTTGACGACCTATCAAAGTTGTATGTACTTTTATATCTA
TTTGTAGACATATGTAAGAAGAGGAAGAGCGAATTAAGATGCGCTGAGAA
ACCGAATTAAGGACAGAACAAAAGGAG

Coding sequence (CDS) from alignment at chr22:332885..337311-

>NO22G01070.1 ID=NO22G01070.1|Name=NO22G01070.1|organism=Nannochloropsis oceanica|type=CDS|length=2199bp|location=Sequence derived from alignment at chr22:332885..337311- (Nannochloropsis oceanica)
ATGGATCTTGCCATTGGGCAGCAGCCGAGTAATAGCCTGGCCTACACGAA
CCGAGTGTATGTGAGTCTGGCCGACTGGGACGCGCTGCTAGCACGCGTGA
CGAATCCTGATGCAAGCAGGACGGGAGAGGACGCTTTGCTGGTGAGCGTG
AATGGGCTGGTTTTTACGGCAAGCTACAACAATGGCATCGACACCGGCAA
CTTGGGCCTCAACTCCTTGCAACGACGCTTTGGGTTGTTTACGCTGATGC
AGCGGGTCAAGGTGGACATCTTTGAGAGTAATGCAGGCCTGGCACTGACT
TCAGTGGTGGTACGCGTGGATTTGCTTGCCAAGGGGAAGGTCAAGGCGCC
CGTGCAACTAGCCACGGAAGAAATGGCAGGCATCTTGAAAGCCACCTACC
TTTCCCAGGTCCTGCAGATAAATCAGTCCCTGGCTTGGGATTTCAACGGC
ACCAAGCTGGAGTTGACGGTGGAGAGCTTTAAGAAGCTGGTCCCGGGGGG
AGATAGCCCAAATGCGGGTCAGATGCTGCAGCCGACCGATGTAGTGTTCA
CGAAGGAGAAAGGGGCGATGGTGGTCTTGTCGGGGGCGAACTCGGGGGCG
CCTCGTGATAACATCATCAATCCGGATTTTGATTTTGGCAAGCTGGGTAT
TGGAGGATTGGGGAATGAGTTTAATCAGATTTTCCGGAGGGCATTCGCAT
CAAGGGTGTTTCCGGGGCACATTGTCAAGCAGTTGGGGATCAACCACGTG
AGGGGGATGTTGTTGTGGGGGCCGCCAGGGTGTGGTAAGACGTTGATTGC
CCGTACGATTGGCAAGATTCTTAATGCGCACGAACCAAAAATCGTTAATG
GGCCTGAGGTGCTTGATAAGTATGTGGGGGGTTCGGAGGAGAAGATAAGA
GCGTTGTTCGCAGACGCGGAAAAGGAGCAGGTAGAGATGGGGGATGCGAG
TGGGTTGCATGTGATAATATTTGATGAGATTGATGCGATTTGTAAGACTC
GGGGGTCAAGTCGGGATAGTACGGGGGTATCGGACTCGATCGTAAATCAG
TTGTTGTCCAAGATTGATGGGGTGAACTCGTTGAACAACATTTTGGTGAT
AGGTATGACGAACCGAAAAGACATGATTGATGAGGCCATCATACGGCCCG
GTCGTCTAGAAGTGCACGTTGAAATTGGCTTGCCGGACGAGGCAGGGCGG
TTGCAGATCATCTCGATCCATACCAAGAGCATGCGGGACCACAAGAGAAT
TTCTCCCGAGGCGCTCGACAAGATGGCGGAGCTCGCGCGGGCGACCAAGA
ATTTTTCAGGAGCGGAGATCGAGGGTCTTGTTAAGTCGGCGGCATCCTTT
GCATTTCAACGTAATGTGAATGTAAAGGATCTGTCGAAGCTAAATGAGGC
AGACTTGGTGGTCCAGTGGTCTGATTTCCAACTAGCCCAGCAAGAGGTCC
AGCCTCGCTTGGGAGCCAATTCAGAGGAGCTGGAAGTGTTATTCCGGAAC
GGTATCGTCCCCTATGGCCCGGCTTTTGACTCGGTCATGATGACGCTGAG
GAGATTTGTGCAGCAGGTGAGGGTGTCGGCACGCACACCATTGTTGTCCC
TTCTGTTGGAGGGGGCGCCAAGCACGGGGAAGACGGCTATAGCGGCCTCG
CTCGGGGTGCAGAGCGAGTTTCCGTTTGTCCGGGTGGTGTCGGCGGATGC
TATGGTAGGTTTTTCGGAAGCGGCTAAGTGTGCGGCAATATTGAAAGCTT
TTCAGGACAGTTCGAGGTCGCCGTTGTCGGTTGTGATTTTGGATGATTTG
GAAAGGTTGATTGACTACTCTCCGATCGGTCCCAGGTTTAGTAATACTGT
AGTACAGACGCTTTTGGTATTGTTGAAGAAACCGCCAGTCAGCCCGGAGA
AACGATTAATGGTCATTGGAACGACGTCGGTGGCGGCACATTTGGAGGAC
CTGCAGTTGGTGCAAGGTTTCAATGTCATGTTGAATGTGCCGCAGTTAAC
GGGGGGGGAGGAGATCAAGGCGGTGTTGAGGGAGGTGGTGGCCGGACTGT
CCCAGAAGGAGATGGATGACATTGCCTCTGCAATTAGTAAGCCGATTGGG
ATCAAGCAGCTATTGATGGTGACAGAGATGGCCCGGCAGGAGGAGGAGAC
GGTGTCGACGGATCGATTTTTGGAGTGCTTGCATATTTGTGGATTTTAA

Synonyms

Publications