NO22G00920.1, NO22G00920.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G00920.1
Unique NameNO22G00920.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4725
Alignment locationchr22:291530..296254 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:291530..296254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO22G00920.1 vs.
Match: EWM21433.1 (hypothetical protein Naga_100307g5 [Nannochloropsis gaditana])

HSP 1 Score: 680.6 bits (1755), Expect = 1.100e-191
Identity = 569/1615 (35.23%), Postives = 809/1615 (50.09%), Query Frame = 0 
Query:    3 QDEDNVDDVIIQTVGKILKEGFRQGQLAPSSTANQALHAI--DGGTKERLLAPLATALARSISTEKEAQQQCEHVRRITEAVLTKGLKGLIVVKTEEEEAEGEEEDKVGNEDEDDPWSSGGGGGGGDATSLSSYSIF-GPGYNKDKGGSFSLFSMLEIPDVVMVDLGMVARQLQETMKREQKEGLRALENSLLGDLTYSEHWPDICEGLARLLTVP--------GGK-------EKGMEEGEEEGE-----EYAVPMRTVKLYRKLFDCLTSRQRADIYLAVTIDIIQTFRTQIWVLP---PPSFP-----SSSSSTSPPSLASL-LEATPAGCLLWAKIQLFHKMQKEMPAMFPHLQDRSLHSILIWTCLLLRTL--TLSPFLPPSLLLSPAHFLAVVDGKAEWFRQWCLRLPPTLMSYMVARTGLLEDLLQQQQPQEQQQQQQQQQGQASLNIQNFSNSNCGSKDTSSSNSTSSSTTSNPSDVHVMPLPPPPMQVVYLDRTEKQPSISS-----HSLPSTFSASLVAKQWQTAGMCMLSHLCTTSSLLFDERQQHRQQQHQQQDNEKAQATDGCVESILPLWRGTPVLFPEQLPTGPCDVNLTLPDPATGMRLHLHIKTFPLPSSSHSFPSDVEVAACPFSPPLPLSSSRFSYLARLAELFLTTMLALDKEQ---------------AAATSPAVAEERRKATATATAAAAAAATAAAARQLHQVHNGDSAISLLAARAATFALLTLPLHRTPLILEDTFKRLVRGINALFFDQCFQSSPHLHLILRA-ALHISNQLFDKPRKEDEEEREEDEETRDLRADLFLLHRNVSIASSFYRTRFSILLPLYLKRPFASSRELQTLFCRSILYLYRARPTVMGDLRYWPAPNTLPLDFT----MVKILENEEGVEEEDRSGKREVGEEYGRKVRERACAILVPFLWDFQGVLSLLEMKEGSPLAHVLRFLNQHVLRRLSFAEKEEEGGREEEKNENKNEDDQGGSLLPLSLPLLGIFLQNIACTTQGASAVWNSQLLQQYLLPFLFVQAPHQYGIFYADHISSPHPPLQPSRLRHTLWLAFSLLRPLARTHAALLQTLLKPHVELSQE------QGQDGEEKSMRVVSDEQRE------------------LSLRLVICVASTMDGAAWLLTTFPSLDASLRRACA--PSLLSSLPP-----------HSDHEIIKNEAGADCRRSAETYLFSASFSPQLDGPLLATAYLRALLHQANTSPSLPPSPPLHDEGEVEDALVTLSVQAAVTYGGLGNGWGQMPLKCFPQQSEFRQQQQQQQQQMGWEGGLSSTPLPCLINILKEGGGVGGEKTALLPLCWKHIR----GCGYAKQSGIALETFSSGAAAPS------ESAAIDQQQALSR---TKIEMILVHVVRWGMLPDTDADKGGFRRSLVRLVEASAGRVSVWQLGIWLIMACGQG-EEVLPLLPSLYRHGLREKFKGEKKGEENEGEKEEDYALADRTVETLHREMPEVGGAMIRCGLSARALVLSWYQHSFWGVLSVTELAINETLRFLYGRKGQVALVLALFRHVREELLRAAARQDDMLRLFHLFSHGVRRFEFTPEVVENM 1508
            ++ED  ++V+ Q +  IL+EG R+   A +  A Q L ++  D   K++LLAPL   L   + T+ + +   + ++   E  + +    +  +  E ++     E+    E+E D W    G       + +SYSIF G   N+++G SFSL SML++P+V M+DLG VA QLQ +MK +Q  GL+ALE S+  +LTYSEHW  +CEGLARL+           G K        +G+   E+E E     +  V MR +K+Y +LF CL+  QRADIYLAV  D++ TFR+++WVLP    PS P     SS    SPP  A+L +E TP G LL AK+ L H+MQ+++P++FPHL D +LH +L WTCLLLRTL    SP   P LLLSP H  A +D  A WF+ WCLRLPP  +SY + RTGLL D+L   +P ++Q           + + + S       D  +++   +S     + V + PLP          R   +P ISS      S P      L A + Q+  + +LSHL  T+SL F               +E  +A +GCV ++  LW G   L   +LP+   DV L  P  A     HL I T                A+ P     P S S  SYL   AELFL T+L  D                  AA T P+ A +  +    +T+        A A      H   ++      ++A  ALL LPL  +  +      RL+  +       C   +    L+L   AL +S +   +      +         DLR   FL    V +  +        L P       AS   LQ ++C S+  +YR +P +  DL  WP    LPL  T      +I+  ++       +G     ++ GR+ +E A A L    WD++G+  L  +  G  L + L        R L   E+EE+GG E++ +E + ++      L  SLP L I LQNIA     A        L   LL  LF   P ++G+ YA+ +SSP P LQP RLRHTL LA  L R LA      L+ +  PHV +  E        + G +K+ R +  E R                   LSLRL+I +AST++GAAWL+ TFP+L+A+L RA A  PS  +S P            HS    I   AG +    A             D  LL   YLRALLHQ   S +LPP PPL DE E++ AL  LSVQ A+  GGL  GWG MP+  F Q+   R+ ++            + +P P L  +L+EG G+GGEK  LLP+CW+H+R    G    + +G      S+    P       + A  +    ++R    +I+M++VH  RWG+LPD +A+K  FRRSL+ LV+ S+G ++VW+L IWLIMACG+G EEVLPLL      G     + +++G  +    +++ ALAD TV  L  +MPE+ GA+ +CGLS RA+VLSW+ HSFWG LSVTELAI+ETL  L+G   +V + L+LF+ +RE+LL AAARQ D++R+ H+    ++RFEFTP+V+E +
Sbjct:    2 EEEDETENVVRQVLEGILQEGLRRAN-ATNMKAAQCLRSLNSDQRAKDQLLAPLTATLC-DVRTKDDLEDNRKCIKDFMEQYVDRSFPSISGMLGENDQVVEMVEEA---EEEQDKWGDEVGA------TENSYSIFTGKDENRNQG-SFSLLSMLDLPEVRMIDLGAVAAQLQGSMKEKQIAGLKALETSMWSELTYSEHWSGVCEGLARLVAASTEAVLESIGDKASEGRVPRRGVRASEQEQEGQGKDDSDVCMRVIKMYWELFTCLSPGQRADIYLAVAADLVNTFRSRLWVLPNAGSPSLPAEEDVSSPPGPSPPCAAALSIEGTPHGRLLCAKVGLLHRMQQDLPSLFPHLPDLALHQVLAWTCLLLRTLHSPSSPSQHPHLLLSPIHLFAALDASAHWFKSWCLRLPPPKLSYFLQRTGLLGDILHVCRPLKEQPGH-------GIGLDDSSRWEDKGDDAVAASPALASREEEAAVVRLHPLP----------RVPDEPDISSLPPFLCSFPPLDPRGLTALK-QSFSLSLLSHLGATASLTF------------HAGSESGKAREGCVGAVSALWGGAVALRAHELPSRLSDVCLAPPPAAPACSPHLRIAT--------------STASAP-----PSSPSSGSYLISCAELFLHTLLVEDTPGEHPPMQVSLPRIPCIAATTHPSAAADCPE-PRVSTSHPDKTKDIAFAHFSTPAHINVTSGPFYLCQSAAAALLELPLPASYRM--HALGRLIARLRG----PCPPEAQARRLVLTVLALRLSTRCGARAGPGGGDADGVGTGLEDLR---FLHQHAVRLCCTRSLATSPPLSP-------ASINLLQRVYCESLFSVYRTQPCLFDDLPRWPLHVFLPLLVTPPTAATEIMREDDAGGHTGGAGLPNTTKD-GRRSQEFAYACLGLLCWDYRGMRYLSRL--GGSLFYGL--TGALCTRVLDVLEREEDGG-EDDGDERRGDEQSVCPFLTPSLPFLPILLQNIASVGPQAPLAG----LLSTLLACLFQDFPRRHGLRYAEDLSSPLPLLQPPRLRHTLCLALVLARELASRPFEALEDIAAPHVAVLLEWEKPPLMPELGGDKAKRALPREPRGRREGVRPAVWKDSEAGQLLSLRLLISMASTLNGAAWLVATFPALNAALCRASALWPSSHTSSPSPGRPGPPGSRMHSTFVSIGKNAGDEKEERA------------ADDNLLGALYLRALLHQEKASSALPPPPPLRDEEEIDAALAVLSVQRAMDSGGLRYGWGAMPVHFF-QEHAVRKLER------------AGSP-PSLTRLLEEGYGMGGEKNHLLPVCWEHVRRHVHGGPERESAGGGASKGSTDTCQPGWGPEARQVAPGEPSTCITRACHVQIDMVIVHAARWGLLPDEEAEKTNFRRSLLSLVQGSSGVMTVWELSIWLIMACGKGEEEVLPLL----LWGRLPPKRSQERGLRDGRVGQDNGALADETVTALDSQMPEINGALTQCGLSTRAVVLSWFTHSFWGALSVTELAISETLYILHGPAMRVGVALSLFKFMREDLLVAAARQYDVIRVSHIVEASLKRFEFTPQVMEGL 1498
The following BLAST results are available for this feature:
BLAST of NO22G00920.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21433.11.100e-19135.23hypothetical protein Naga_100307g5 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00920NO22G00920Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G00920.1NO22G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G00920.1.cds1NO22G00920.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G00920.1 ID=NO22G00920.1|Name=NO22G00920.1|organism=Nannochloropsis oceanica|type=mRNA|length=4725bp
AAAAACAGGAACGGATGGAGCAAGACGAAGACAACGTGGACGATGTCATT
ATTCAGACGGTGGGGAAGATCCTGAAGGAGGGGTTCCGGCAGGGTCAGCT
GGCCCCCAGCAGCACTGCAAATCAAGCCCTGCATGCCATCGACGGGGGCA
CCAAAGAGCGGCTCCTCGCGCCTCTGGCCACCGCCCTTGCGAGAAGCATC
AGCACGGAGAAAGAGGCCCAACAACAATGTGAGCACGTGCGGCGTATTAC
GGAAGCGGTTCTGACAAAAGGATTGAAAGGATTAATTGTGGTCAAGACTG
AAGAAGAGGAGGCCGAGGGCGAAGAGGAGGACAAAGTCGGCAACGAAGAC
GAAGACGACCCTTGGAGCAGTGGCGGCGGCGGAGGCGGTGGCGACGCAAC
CAGTTTATCATCCTACTCGATCTTTGGTCCCGGTTATAATAAAGACAAGG
GCGGTTCGTTCTCCCTTTTTTCAATGCTGGAGATCCCAGACGTGGTGATG
GTGGATTTGGGGATGGTCGCCAGACAGCTGCAGGAAACGATGAAGAGAGA
GCAAAAGGAGGGGTTGCGAGCACTCGAGAACTCTCTGTTGGGAGATCTTA
CATACAGCGAGCATTGGCCGGATATCTGTGAGGGGTTGGCGAGGCTTTTG
ACCGTACCAGGAGGGAAGGAGAAAGGAATGGAAGAGGGGGAAGAGGAGGG
AGAGGAGTACGCCGTTCCCATGCGGACCGTGAAGCTCTATCGGAAACTGT
TCGACTGCCTGACAAGTAGACAACGCGCTGATATCTATCTAGCTGTCACG
ATCGATATCATTCAAACCTTTCGCACCCAAATCTGGGTCCTCCCCCCTCC
TTCCTTCCCTTCCTCTTCCTCCTCTACCTCCCCTCCCTCCCTCGCCTCTC
TCCTGGAAGCTACTCCGGCAGGATGTCTTCTTTGGGCAAAGATACAGCTC
TTTCACAAGATGCAAAAAGAAATGCCCGCCATGTTTCCCCATCTTCAGGA
CCGCTCCCTCCACTCGATTCTCATCTGGACCTGCCTCCTGCTCCGCACCT
TAACCCTTTCTCCTTTCCTTCCTCCCTCGCTTCTTCTCTCCCCTGCGCAT
TTTTTGGCGGTGGTAGATGGGAAAGCGGAATGGTTTAGGCAGTGGTGTCT
GCGTTTACCTCCTACCTTGATGTCTTACATGGTTGCACGGACAGGCTTAC
TAGAGGACCTTTTGCAGCAGCAGCAGCCGCAGGAGCAGCAGCAACAGCAA
CAGCAACAGCAGGGCCAAGCATCATTAAACATTCAAAATTTTAGTAATAG
CAATTGTGGCAGTAAAGATACCAGCAGCAGCAATAGCACCAGCAGCAGCA
CCACCAGTAACCCCTCCGATGTGCACGTAATGCCGCTGCCGCCTCCTCCT
ATGCAAGTCGTCTACCTCGACAGGACAGAAAAACAGCCATCCATCTCCTC
TCACAGTTTGCCCTCCACATTCAGCGCGAGTCTGGTTGCAAAGCAGTGGC
AGACAGCAGGCATGTGCATGCTCTCCCATCTTTGCACGACGTCCTCCCTC
CTTTTCGACGAACGGCAGCAGCACCGGCAGCAACAACACCAACAACAGGA
TAACGAAAAGGCGCAAGCGACTGACGGCTGTGTTGAATCAATCCTTCCGT
TATGGAGAGGGACACCTGTCCTCTTTCCAGAGCAGCTGCCAACGGGTCCT
TGTGATGTCAACCTCACCCTGCCTGATCCCGCCACGGGCATGCGCCTCCA
CCTCCACATTAAGACTTTTCCGTTGCCTTCGTCGTCACATTCTTTCCCGT
CAGACGTGGAGGTTGCTGCTTGTCCTTTCTCGCCCCCTCTTCCTCTTTCT
TCTTCCCGGTTTTCGTACCTCGCGCGCTTGGCTGAACTCTTCCTCACCAC
CATGTTAGCCCTAGACAAAGAGCAAGCAGCAGCAACATCACCAGCAGTAG
CAGAGGAACGACGAAAGGCAACAGCAACAGCAACCGCAGCAGCAGCAGCA
GCAGCAACAGCAGCAGCAGCCCGACAATTGCACCAAGTTCACAATGGCGA
CAGCGCAATTTCTCTTCTAGCTGCTCGAGCCGCCACCTTCGCTCTCCTCA
CCCTTCCCCTTCACCGCACCCCTCTCATCTTGGAAGACACCTTCAAGCGA
TTAGTACGAGGTATCAATGCTTTATTTTTCGATCAATGCTTTCAAAGCTC
TCCGCATCTCCACCTTATCCTGCGCGCGGCTTTGCACATTTCCAATCAGT
TGTTTGATAAGCCGAGGAAGGAGGACGAGGAGGAGAGGGAGGAGGACGAG
GAGACCAGAGACCTCCGCGCGGACCTTTTCCTCCTACACCGAAACGTCAG
CATCGCCTCTTCTTTCTACAGAACGCGCTTTTCGATTCTCCTCCCGCTTT
ATTTGAAACGCCCATTCGCTTCTTCGAGGGAGTTGCAGACCTTGTTTTGT
CGATCGATTCTTTATTTGTACCGTGCTCGACCGACTGTTATGGGTGATTT
GAGATACTGGCCGGCGCCAAACACGCTTCCCCTCGATTTTACCATGGTGA
AAATACTCGAGAATGAGGAGGGGGTAGAGGAGGAGGACAGGTCGGGTAAG
AGGGAAGTGGGAGAGGAGTATGGGCGGAAAGTGAGAGAACGTGCGTGTGC
GATACTTGTGCCTTTTCTGTGGGACTTTCAAGGCGTGCTTTCTCTCTTAG
AGATGAAGGAGGGATCCCCTCTTGCTCATGTCCTTCGTTTCCTCAATCAA
CATGTGCTTCGCCGTCTCTCTTTTGCGGAGAAAGAGGAGGAGGGCGGGAG
GGAGGAGGAGAAAAATGAAAACAAGAACGAGGATGATCAAGGTGGCTCTC
TGCTCCCTCTCTCCCTCCCCCTCCTCGGCATCTTCCTCCAAAACATAGCC
TGCACGACCCAAGGGGCCTCTGCTGTATGGAATAGTCAACTACTACAACA
GTACCTCCTCCCCTTCCTTTTCGTCCAAGCCCCGCATCAATACGGCATTT
TCTATGCCGACCACATTTCCTCCCCCCACCCCCCCCTCCAGCCCTCCCGT
CTTCGACACACTCTATGGTTGGCTTTCTCCTTGTTGCGACCCTTGGCCAG
AACACACGCTGCCTTGCTGCAGACGTTGCTGAAGCCTCACGTGGAGCTGT
CACAGGAACAGGGGCAAGATGGCGAGGAGAAGAGTATGAGGGTGGTCTCA
GACGAGCAGCGGGAGTTGTCGTTACGCCTTGTGATATGCGTTGCTAGCAC
CATGGACGGTGCTGCCTGGCTGCTGACCACCTTCCCCTCCCTCGATGCCT
CCCTCCGTCGTGCTTGTGCTCCATCCCTCCTTTCTTCGCTCCCTCCTCAC
TCTGACCATGAGATAATAAAAAATGAAGCCGGCGCTGACTGTCGTCGATC
GGCGGAAACGTATCTCTTCTCTGCCTCATTCTCCCCTCAGCTTGATGGTC
CCCTCCTAGCAACAGCCTACCTTCGCGCTCTCCTGCATCAGGCCAACACC
TCTCCCTCCCTCCCTCCCTCCCCTCCGCTACACGACGAGGGCGAGGTGGA
GGACGCATTGGTCACTCTCTCGGTCCAAGCAGCTGTGACTTATGGAGGCC
TAGGAAATGGATGGGGACAGATGCCCCTCAAGTGCTTCCCACAGCAGTCG
GAGTTCCGACAGCAGCAGCAGCAGCAGCAGCAGCAGATGGGATGGGAGGG
AGGATTATCCTCCACACCTCTTCCTTGCCTGATAAATATATTGAAGGAAG
GTGGTGGGGTAGGCGGGGAGAAGACGGCATTGCTTCCTCTTTGTTGGAAG
CATATACGTGGTTGTGGCTACGCCAAGCAAAGCGGAATTGCGCTAGAAAC
CTTTTCGTCTGGAGCAGCAGCACCATCAGAATCAGCAGCTATCGATCAGC
AGCAGGCCCTATCGCGGACCAAAATCGAAATGATATTGGTCCACGTCGTG
CGGTGGGGGATGTTACCCGACACTGACGCAGATAAGGGGGGCTTTCGACG
CTCCCTCGTCCGCCTAGTCGAGGCAAGTGCTGGTCGCGTAAGTGTGTGGC
AGTTGGGTATATGGTTGATCATGGCTTGTGGGCAGGGGGAAGAGGTGCTG
CCGCTGTTGCCTTCGTTGTATCGCCACGGCCTTCGGGAGAAGTTCAAGGG
GGAGAAGAAGGGTGAGGAGAATGAGGGTGAGAAAGAGGAGGACTACGCGC
TTGCTGATAGAACAGTGGAGACTTTACACAGAGAGATGCCGGAGGTAGGC
GGGGCGATGATCAGGTGTGGGCTCTCGGCCCGGGCGCTGGTATTAAGTTG
GTACCAGCACTCATTTTGGGGTGTCTTGTCCGTGACTGAGCTTGCCATCA
ATGAGACCTTGAGGTTCCTTTACGGGCGCAAAGGGCAGGTGGCCCTGGTC
CTAGCCCTTTTTCGGCATGTGAGGGAGGAGTTATTGAGGGCGGCGGCGCG
GCAGGATGATATGCTCCGTCTCTTTCATCTCTTTTCACACGGGGTACGGC
GCTTTGAGTTTACGCCCGAGGTGGTGGAGAACATGGGCTTGTAATATGAA
ATGGGTGAAATAGACATATGGGAGAGCAAGATCCAAAAAAGACCAAGAAT
AAACTTACGAATTTTGTGTGCTTTGTGCCTCTAAATAGACCGGTTACGTA
TTGCCAACAGTGTCCCAATGTGGGAAAGTGTTCAGAGGTGTGGGGAGGTG
CGACCGTCACTTCCTGAATTTCTTC
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protein sequence of NO22G00920.1

>NO22G00920.1-protein ID=NO22G00920.1-protein|Name=NO22G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1510bp
MEQDEDNVDDVIIQTVGKILKEGFRQGQLAPSSTANQALHAIDGGTKERL
LAPLATALARSISTEKEAQQQCEHVRRITEAVLTKGLKGLIVVKTEEEEA
EGEEEDKVGNEDEDDPWSSGGGGGGGDATSLSSYSIFGPGYNKDKGGSFS
LFSMLEIPDVVMVDLGMVARQLQETMKREQKEGLRALENSLLGDLTYSEH
WPDICEGLARLLTVPGGKEKGMEEGEEEGEEYAVPMRTVKLYRKLFDCLT
SRQRADIYLAVTIDIIQTFRTQIWVLPPPSFPSSSSSTSPPSLASLLEAT
PAGCLLWAKIQLFHKMQKEMPAMFPHLQDRSLHSILIWTCLLLRTLTLSP
FLPPSLLLSPAHFLAVVDGKAEWFRQWCLRLPPTLMSYMVARTGLLEDLL
QQQQPQEQQQQQQQQQGQASLNIQNFSNSNCGSKDTSSSNSTSSSTTSNP
SDVHVMPLPPPPMQVVYLDRTEKQPSISSHSLPSTFSASLVAKQWQTAGM
CMLSHLCTTSSLLFDERQQHRQQQHQQQDNEKAQATDGCVESILPLWRGT
PVLFPEQLPTGPCDVNLTLPDPATGMRLHLHIKTFPLPSSSHSFPSDVEV
AACPFSPPLPLSSSRFSYLARLAELFLTTMLALDKEQAAATSPAVAEERR
KATATATAAAAAAATAAAARQLHQVHNGDSAISLLAARAATFALLTLPLH
RTPLILEDTFKRLVRGINALFFDQCFQSSPHLHLILRAALHISNQLFDKP
RKEDEEEREEDEETRDLRADLFLLHRNVSIASSFYRTRFSILLPLYLKRP
FASSRELQTLFCRSILYLYRARPTVMGDLRYWPAPNTLPLDFTMVKILEN
EEGVEEEDRSGKREVGEEYGRKVRERACAILVPFLWDFQGVLSLLEMKEG
SPLAHVLRFLNQHVLRRLSFAEKEEEGGREEEKNENKNEDDQGGSLLPLS
LPLLGIFLQNIACTTQGASAVWNSQLLQQYLLPFLFVQAPHQYGIFYADH
ISSPHPPLQPSRLRHTLWLAFSLLRPLARTHAALLQTLLKPHVELSQEQG
QDGEEKSMRVVSDEQRELSLRLVICVASTMDGAAWLLTTFPSLDASLRRA
CAPSLLSSLPPHSDHEIIKNEAGADCRRSAETYLFSASFSPQLDGPLLAT
AYLRALLHQANTSPSLPPSPPLHDEGEVEDALVTLSVQAAVTYGGLGNGW
GQMPLKCFPQQSEFRQQQQQQQQQMGWEGGLSSTPLPCLINILKEGGGVG
GEKTALLPLCWKHIRGCGYAKQSGIALETFSSGAAAPSESAAIDQQQALS
RTKIEMILVHVVRWGMLPDTDADKGGFRRSLVRLVEASAGRVSVWQLGIW
LIMACGQGEEVLPLLPSLYRHGLREKFKGEKKGEENEGEKEEDYALADRT
VETLHREMPEVGGAMIRCGLSARALVLSWYQHSFWGVLSVTELAINETLR
FLYGRKGQVALVLALFRHVREELLRAAARQDDMLRLFHLFSHGVRRFEFT
PEVVENMGL*
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mRNA from alignment at chr22:291530..296254+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G00920.1 ID=NO22G00920.1|Name=NO22G00920.1|organism=Nannochloropsis oceanica|type=mRNA|length=4725bp|location=Sequence derived from alignment at chr22:291530..296254+ (Nannochloropsis oceanica)
AAAAACAGGAACGGATGGAGCAAGACGAAGACAACGTGGACGATGTCATT
ATTCAGACGGTGGGGAAGATCCTGAAGGAGGGGTTCCGGCAGGGTCAGCT
GGCCCCCAGCAGCACTGCAAATCAAGCCCTGCATGCCATCGACGGGGGCA
CCAAAGAGCGGCTCCTCGCGCCTCTGGCCACCGCCCTTGCGAGAAGCATC
AGCACGGAGAAAGAGGCCCAACAACAATGTGAGCACGTGCGGCGTATTAC
GGAAGCGGTTCTGACAAAAGGATTGAAAGGATTAATTGTGGTCAAGACTG
AAGAAGAGGAGGCCGAGGGCGAAGAGGAGGACAAAGTCGGCAACGAAGAC
GAAGACGACCCTTGGAGCAGTGGCGGCGGCGGAGGCGGTGGCGACGCAAC
CAGTTTATCATCCTACTCGATCTTTGGTCCCGGTTATAATAAAGACAAGG
GCGGTTCGTTCTCCCTTTTTTCAATGCTGGAGATCCCAGACGTGGTGATG
GTGGATTTGGGGATGGTCGCCAGACAGCTGCAGGAAACGATGAAGAGAGA
GCAAAAGGAGGGGTTGCGAGCACTCGAGAACTCTCTGTTGGGAGATCTTA
CATACAGCGAGCATTGGCCGGATATCTGTGAGGGGTTGGCGAGGCTTTTG
ACCGTACCAGGAGGGAAGGAGAAAGGAATGGAAGAGGGGGAAGAGGAGGG
AGAGGAGTACGCCGTTCCCATGCGGACCGTGAAGCTCTATCGGAAACTGT
TCGACTGCCTGACAAGTAGACAACGCGCTGATATCTATCTAGCTGTCACG
ATCGATATCATTCAAACCTTTCGCACCCAAATCTGGGTCCTCCCCCCTCC
TTCCTTCCCTTCCTCTTCCTCCTCTACCTCCCCTCCCTCCCTCGCCTCTC
TCCTGGAAGCTACTCCGGCAGGATGTCTTCTTTGGGCAAAGATACAGCTC
TTTCACAAGATGCAAAAAGAAATGCCCGCCATGTTTCCCCATCTTCAGGA
CCGCTCCCTCCACTCGATTCTCATCTGGACCTGCCTCCTGCTCCGCACCT
TAACCCTTTCTCCTTTCCTTCCTCCCTCGCTTCTTCTCTCCCCTGCGCAT
TTTTTGGCGGTGGTAGATGGGAAAGCGGAATGGTTTAGGCAGTGGTGTCT
GCGTTTACCTCCTACCTTGATGTCTTACATGGTTGCACGGACAGGCTTAC
TAGAGGACCTTTTGCAGCAGCAGCAGCCGCAGGAGCAGCAGCAACAGCAA
CAGCAACAGCAGGGCCAAGCATCATTAAACATTCAAAATTTTAGTAATAG
CAATTGTGGCAGTAAAGATACCAGCAGCAGCAATAGCACCAGCAGCAGCA
CCACCAGTAACCCCTCCGATGTGCACGTAATGCCGCTGCCGCCTCCTCCT
ATGCAAGTCGTCTACCTCGACAGGACAGAAAAACAGCCATCCATCTCCTC
TCACAGTTTGCCCTCCACATTCAGCGCGAGTCTGGTTGCAAAGCAGTGGC
AGACAGCAGGCATGTGCATGCTCTCCCATCTTTGCACGACGTCCTCCCTC
CTTTTCGACGAACGGCAGCAGCACCGGCAGCAACAACACCAACAACAGGA
TAACGAAAAGGCGCAAGCGACTGACGGCTGTGTTGAATCAATCCTTCCGT
TATGGAGAGGGACACCTGTCCTCTTTCCAGAGCAGCTGCCAACGGGTCCT
TGTGATGTCAACCTCACCCTGCCTGATCCCGCCACGGGCATGCGCCTCCA
CCTCCACATTAAGACTTTTCCGTTGCCTTCGTCGTCACATTCTTTCCCGT
CAGACGTGGAGGTTGCTGCTTGTCCTTTCTCGCCCCCTCTTCCTCTTTCT
TCTTCCCGGTTTTCGTACCTCGCGCGCTTGGCTGAACTCTTCCTCACCAC
CATGTTAGCCCTAGACAAAGAGCAAGCAGCAGCAACATCACCAGCAGTAG
CAGAGGAACGACGAAAGGCAACAGCAACAGCAACCGCAGCAGCAGCAGCA
GCAGCAACAGCAGCAGCAGCCCGACAATTGCACCAAGTTCACAATGGCGA
CAGCGCAATTTCTCTTCTAGCTGCTCGAGCCGCCACCTTCGCTCTCCTCA
CCCTTCCCCTTCACCGCACCCCTCTCATCTTGGAAGACACCTTCAAGCGA
TTAGTACGAGGTATCAATGCTTTATTTTTCGATCAATGCTTTCAAAGCTC
TCCGCATCTCCACCTTATCCTGCGCGCGGCTTTGCACATTTCCAATCAGT
TGTTTGATAAGCCGAGGAAGGAGGACGAGGAGGAGAGGGAGGAGGACGAG
GAGACCAGAGACCTCCGCGCGGACCTTTTCCTCCTACACCGAAACGTCAG
CATCGCCTCTTCTTTCTACAGAACGCGCTTTTCGATTCTCCTCCCGCTTT
ATTTGAAACGCCCATTCGCTTCTTCGAGGGAGTTGCAGACCTTGTTTTGT
CGATCGATTCTTTATTTGTACCGTGCTCGACCGACTGTTATGGGTGATTT
GAGATACTGGCCGGCGCCAAACACGCTTCCCCTCGATTTTACCATGGTGA
AAATACTCGAGAATGAGGAGGGGGTAGAGGAGGAGGACAGGTCGGGTAAG
AGGGAAGTGGGAGAGGAGTATGGGCGGAAAGTGAGAGAACGTGCGTGTGC
GATACTTGTGCCTTTTCTGTGGGACTTTCAAGGCGTGCTTTCTCTCTTAG
AGATGAAGGAGGGATCCCCTCTTGCTCATGTCCTTCGTTTCCTCAATCAA
CATGTGCTTCGCCGTCTCTCTTTTGCGGAGAAAGAGGAGGAGGGCGGGAG
GGAGGAGGAGAAAAATGAAAACAAGAACGAGGATGATCAAGGTGGCTCTC
TGCTCCCTCTCTCCCTCCCCCTCCTCGGCATCTTCCTCCAAAACATAGCC
TGCACGACCCAAGGGGCCTCTGCTGTATGGAATAGTCAACTACTACAACA
GTACCTCCTCCCCTTCCTTTTCGTCCAAGCCCCGCATCAATACGGCATTT
TCTATGCCGACCACATTTCCTCCCCCCACCCCCCCCTCCAGCCCTCCCGT
CTTCGACACACTCTATGGTTGGCTTTCTCCTTGTTGCGACCCTTGGCCAG
AACACACGCTGCCTTGCTGCAGACGTTGCTGAAGCCTCACGTGGAGCTGT
CACAGGAACAGGGGCAAGATGGCGAGGAGAAGAGTATGAGGGTGGTCTCA
GACGAGCAGCGGGAGTTGTCGTTACGCCTTGTGATATGCGTTGCTAGCAC
CATGGACGGTGCTGCCTGGCTGCTGACCACCTTCCCCTCCCTCGATGCCT
CCCTCCGTCGTGCTTGTGCTCCATCCCTCCTTTCTTCGCTCCCTCCTCAC
TCTGACCATGAGATAATAAAAAATGAAGCCGGCGCTGACTGTCGTCGATC
GGCGGAAACGTATCTCTTCTCTGCCTCATTCTCCCCTCAGCTTGATGGTC
CCCTCCTAGCAACAGCCTACCTTCGCGCTCTCCTGCATCAGGCCAACACC
TCTCCCTCCCTCCCTCCCTCCCCTCCGCTACACGACGAGGGCGAGGTGGA
GGACGCATTGGTCACTCTCTCGGTCCAAGCAGCTGTGACTTATGGAGGCC
TAGGAAATGGATGGGGACAGATGCCCCTCAAGTGCTTCCCACAGCAGTCG
GAGTTCCGACAGCAGCAGCAGCAGCAGCAGCAGCAGATGGGATGGGAGGG
AGGATTATCCTCCACACCTCTTCCTTGCCTGATAAATATATTGAAGGAAG
GTGGTGGGGTAGGCGGGGAGAAGACGGCATTGCTTCCTCTTTGTTGGAAG
CATATACGTGGTTGTGGCTACGCCAAGCAAAGCGGAATTGCGCTAGAAAC
CTTTTCGTCTGGAGCAGCAGCACCATCAGAATCAGCAGCTATCGATCAGC
AGCAGGCCCTATCGCGGACCAAAATCGAAATGATATTGGTCCACGTCGTG
CGGTGGGGGATGTTACCCGACACTGACGCAGATAAGGGGGGCTTTCGACG
CTCCCTCGTCCGCCTAGTCGAGGCAAGTGCTGGTCGCGTAAGTGTGTGGC
AGTTGGGTATATGGTTGATCATGGCTTGTGGGCAGGGGGAAGAGGTGCTG
CCGCTGTTGCCTTCGTTGTATCGCCACGGCCTTCGGGAGAAGTTCAAGGG
GGAGAAGAAGGGTGAGGAGAATGAGGGTGAGAAAGAGGAGGACTACGCGC
TTGCTGATAGAACAGTGGAGACTTTACACAGAGAGATGCCGGAGGTAGGC
GGGGCGATGATCAGGTGTGGGCTCTCGGCCCGGGCGCTGGTATTAAGTTG
GTACCAGCACTCATTTTGGGGTGTCTTGTCCGTGACTGAGCTTGCCATCA
ATGAGACCTTGAGGTTCCTTTACGGGCGCAAAGGGCAGGTGGCCCTGGTC
CTAGCCCTTTTTCGGCATGTGAGGGAGGAGTTATTGAGGGCGGCGGCGCG
GCAGGATGATATGCTCCGTCTCTTTCATCTCTTTTCACACGGGGTACGGC
GCTTTGAGTTTACGCCCGAGGTGGTGGAGAACATGGGCTTGTAATATGAA
ATGGGTGAAATAGACATATGGGAGAGCAAGATCCAAAAAAGACCAAGAAT
AAACTTACGAATTTTGTGTGCTTTGTGCCTCTAAATAGACCGGTTACGTA
TTGCCAACAGTGTCCCAATGTGGGAAAGTGTTCAGAGGTGTGGGGAGGTG
CGACCGTCACTTCCTGAATTTCTTC
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Coding sequence (CDS) from alignment at chr22:291530..296254+

>NO22G00920.1 ID=NO22G00920.1|Name=NO22G00920.1|organism=Nannochloropsis oceanica|type=CDS|length=4530bp|location=Sequence derived from alignment at chr22:291530..296254+ (Nannochloropsis oceanica)
ATGGAGCAAGACGAAGACAACGTGGACGATGTCATTATTCAGACGGTGGG
GAAGATCCTGAAGGAGGGGTTCCGGCAGGGTCAGCTGGCCCCCAGCAGCA
CTGCAAATCAAGCCCTGCATGCCATCGACGGGGGCACCAAAGAGCGGCTC
CTCGCGCCTCTGGCCACCGCCCTTGCGAGAAGCATCAGCACGGAGAAAGA
GGCCCAACAACAATGTGAGCACGTGCGGCGTATTACGGAAGCGGTTCTGA
CAAAAGGATTGAAAGGATTAATTGTGGTCAAGACTGAAGAAGAGGAGGCC
GAGGGCGAAGAGGAGGACAAAGTCGGCAACGAAGACGAAGACGACCCTTG
GAGCAGTGGCGGCGGCGGAGGCGGTGGCGACGCAACCAGTTTATCATCCT
ACTCGATCTTTGGTCCCGGTTATAATAAAGACAAGGGCGGTTCGTTCTCC
CTTTTTTCAATGCTGGAGATCCCAGACGTGGTGATGGTGGATTTGGGGAT
GGTCGCCAGACAGCTGCAGGAAACGATGAAGAGAGAGCAAAAGGAGGGGT
TGCGAGCACTCGAGAACTCTCTGTTGGGAGATCTTACATACAGCGAGCAT
TGGCCGGATATCTGTGAGGGGTTGGCGAGGCTTTTGACCGTACCAGGAGG
GAAGGAGAAAGGAATGGAAGAGGGGGAAGAGGAGGGAGAGGAGTACGCCG
TTCCCATGCGGACCGTGAAGCTCTATCGGAAACTGTTCGACTGCCTGACA
AGTAGACAACGCGCTGATATCTATCTAGCTGTCACGATCGATATCATTCA
AACCTTTCGCACCCAAATCTGGGTCCTCCCCCCTCCTTCCTTCCCTTCCT
CTTCCTCCTCTACCTCCCCTCCCTCCCTCGCCTCTCTCCTGGAAGCTACT
CCGGCAGGATGTCTTCTTTGGGCAAAGATACAGCTCTTTCACAAGATGCA
AAAAGAAATGCCCGCCATGTTTCCCCATCTTCAGGACCGCTCCCTCCACT
CGATTCTCATCTGGACCTGCCTCCTGCTCCGCACCTTAACCCTTTCTCCT
TTCCTTCCTCCCTCGCTTCTTCTCTCCCCTGCGCATTTTTTGGCGGTGGT
AGATGGGAAAGCGGAATGGTTTAGGCAGTGGTGTCTGCGTTTACCTCCTA
CCTTGATGTCTTACATGGTTGCACGGACAGGCTTACTAGAGGACCTTTTG
CAGCAGCAGCAGCCGCAGGAGCAGCAGCAACAGCAACAGCAACAGCAGGG
CCAAGCATCATTAAACATTCAAAATTTTAGTAATAGCAATTGTGGCAGTA
AAGATACCAGCAGCAGCAATAGCACCAGCAGCAGCACCACCAGTAACCCC
TCCGATGTGCACGTAATGCCGCTGCCGCCTCCTCCTATGCAAGTCGTCTA
CCTCGACAGGACAGAAAAACAGCCATCCATCTCCTCTCACAGTTTGCCCT
CCACATTCAGCGCGAGTCTGGTTGCAAAGCAGTGGCAGACAGCAGGCATG
TGCATGCTCTCCCATCTTTGCACGACGTCCTCCCTCCTTTTCGACGAACG
GCAGCAGCACCGGCAGCAACAACACCAACAACAGGATAACGAAAAGGCGC
AAGCGACTGACGGCTGTGTTGAATCAATCCTTCCGTTATGGAGAGGGACA
CCTGTCCTCTTTCCAGAGCAGCTGCCAACGGGTCCTTGTGATGTCAACCT
CACCCTGCCTGATCCCGCCACGGGCATGCGCCTCCACCTCCACATTAAGA
CTTTTCCGTTGCCTTCGTCGTCACATTCTTTCCCGTCAGACGTGGAGGTT
GCTGCTTGTCCTTTCTCGCCCCCTCTTCCTCTTTCTTCTTCCCGGTTTTC
GTACCTCGCGCGCTTGGCTGAACTCTTCCTCACCACCATGTTAGCCCTAG
ACAAAGAGCAAGCAGCAGCAACATCACCAGCAGTAGCAGAGGAACGACGA
AAGGCAACAGCAACAGCAACCGCAGCAGCAGCAGCAGCAGCAACAGCAGC
AGCAGCCCGACAATTGCACCAAGTTCACAATGGCGACAGCGCAATTTCTC
TTCTAGCTGCTCGAGCCGCCACCTTCGCTCTCCTCACCCTTCCCCTTCAC
CGCACCCCTCTCATCTTGGAAGACACCTTCAAGCGATTAGTACGAGGTAT
CAATGCTTTATTTTTCGATCAATGCTTTCAAAGCTCTCCGCATCTCCACC
TTATCCTGCGCGCGGCTTTGCACATTTCCAATCAGTTGTTTGATAAGCCG
AGGAAGGAGGACGAGGAGGAGAGGGAGGAGGACGAGGAGACCAGAGACCT
CCGCGCGGACCTTTTCCTCCTACACCGAAACGTCAGCATCGCCTCTTCTT
TCTACAGAACGCGCTTTTCGATTCTCCTCCCGCTTTATTTGAAACGCCCA
TTCGCTTCTTCGAGGGAGTTGCAGACCTTGTTTTGTCGATCGATTCTTTA
TTTGTACCGTGCTCGACCGACTGTTATGGGTGATTTGAGATACTGGCCGG
CGCCAAACACGCTTCCCCTCGATTTTACCATGGTGAAAATACTCGAGAAT
GAGGAGGGGGTAGAGGAGGAGGACAGGTCGGGTAAGAGGGAAGTGGGAGA
GGAGTATGGGCGGAAAGTGAGAGAACGTGCGTGTGCGATACTTGTGCCTT
TTCTGTGGGACTTTCAAGGCGTGCTTTCTCTCTTAGAGATGAAGGAGGGA
TCCCCTCTTGCTCATGTCCTTCGTTTCCTCAATCAACATGTGCTTCGCCG
TCTCTCTTTTGCGGAGAAAGAGGAGGAGGGCGGGAGGGAGGAGGAGAAAA
ATGAAAACAAGAACGAGGATGATCAAGGTGGCTCTCTGCTCCCTCTCTCC
CTCCCCCTCCTCGGCATCTTCCTCCAAAACATAGCCTGCACGACCCAAGG
GGCCTCTGCTGTATGGAATAGTCAACTACTACAACAGTACCTCCTCCCCT
TCCTTTTCGTCCAAGCCCCGCATCAATACGGCATTTTCTATGCCGACCAC
ATTTCCTCCCCCCACCCCCCCCTCCAGCCCTCCCGTCTTCGACACACTCT
ATGGTTGGCTTTCTCCTTGTTGCGACCCTTGGCCAGAACACACGCTGCCT
TGCTGCAGACGTTGCTGAAGCCTCACGTGGAGCTGTCACAGGAACAGGGG
CAAGATGGCGAGGAGAAGAGTATGAGGGTGGTCTCAGACGAGCAGCGGGA
GTTGTCGTTACGCCTTGTGATATGCGTTGCTAGCACCATGGACGGTGCTG
CCTGGCTGCTGACCACCTTCCCCTCCCTCGATGCCTCCCTCCGTCGTGCT
TGTGCTCCATCCCTCCTTTCTTCGCTCCCTCCTCACTCTGACCATGAGAT
AATAAAAAATGAAGCCGGCGCTGACTGTCGTCGATCGGCGGAAACGTATC
TCTTCTCTGCCTCATTCTCCCCTCAGCTTGATGGTCCCCTCCTAGCAACA
GCCTACCTTCGCGCTCTCCTGCATCAGGCCAACACCTCTCCCTCCCTCCC
TCCCTCCCCTCCGCTACACGACGAGGGCGAGGTGGAGGACGCATTGGTCA
CTCTCTCGGTCCAAGCAGCTGTGACTTATGGAGGCCTAGGAAATGGATGG
GGACAGATGCCCCTCAAGTGCTTCCCACAGCAGTCGGAGTTCCGACAGCA
GCAGCAGCAGCAGCAGCAGCAGATGGGATGGGAGGGAGGATTATCCTCCA
CACCTCTTCCTTGCCTGATAAATATATTGAAGGAAGGTGGTGGGGTAGGC
GGGGAGAAGACGGCATTGCTTCCTCTTTGTTGGAAGCATATACGTGGTTG
TGGCTACGCCAAGCAAAGCGGAATTGCGCTAGAAACCTTTTCGTCTGGAG
CAGCAGCACCATCAGAATCAGCAGCTATCGATCAGCAGCAGGCCCTATCG
CGGACCAAAATCGAAATGATATTGGTCCACGTCGTGCGGTGGGGGATGTT
ACCCGACACTGACGCAGATAAGGGGGGCTTTCGACGCTCCCTCGTCCGCC
TAGTCGAGGCAAGTGCTGGTCGCGTAAGTGTGTGGCAGTTGGGTATATGG
TTGATCATGGCTTGTGGGCAGGGGGAAGAGGTGCTGCCGCTGTTGCCTTC
GTTGTATCGCCACGGCCTTCGGGAGAAGTTCAAGGGGGAGAAGAAGGGTG
AGGAGAATGAGGGTGAGAAAGAGGAGGACTACGCGCTTGCTGATAGAACA
GTGGAGACTTTACACAGAGAGATGCCGGAGGTAGGCGGGGCGATGATCAG
GTGTGGGCTCTCGGCCCGGGCGCTGGTATTAAGTTGGTACCAGCACTCAT
TTTGGGGTGTCTTGTCCGTGACTGAGCTTGCCATCAATGAGACCTTGAGG
TTCCTTTACGGGCGCAAAGGGCAGGTGGCCCTGGTCCTAGCCCTTTTTCG
GCATGTGAGGGAGGAGTTATTGAGGGCGGCGGCGCGGCAGGATGATATGC
TCCGTCTCTTTCATCTCTTTTCACACGGGGTACGGCGCTTTGAGTTTACG
CCCGAGGTGGTGGAGAACATGGGCTTGTAA
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Synonyms
Publications