NO22G00760.1, NO22G00760.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G00760.1
Unique NameNO22G00760.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2001
Alignment locationchr22:248836..251204 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:248836..251204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO22G00760.1 vs.
Match: EWM21424.1 (esterase lipase thioesterase family protein [Nannochloropsis gaditana]; EWM21425.1 esterase lipase thioesterase family protein [Nannochloropsis gaditana])

HSP 1 Score: 511.5 bits (1316), Expect = 2.300e-141
Identity = 248/404 (61.39%), Postives = 317/404 (78.47%), Query Frame = 0 
Query:    1 MVLNTPAGLLLAAYALVITWVAWYFFRMLWGHHSQEESM-VKHYGEDRRRVPYAAPCPIPSHISLTEKFVMNARGMLLYTCAWHPSHI-ERPKALIFQCCGFADTNTFLPMMRSIRLAERGFVVVGMDPEGHGRSDGLHAYVPSFPTLVEDYWQFFIKEIMTNPAYAGLPVFLLGESMGGNVAIQLLLRDRTEKKKNPKKHKSFFAGAVFLAPMVKISPALKPPECLVNLLRQVAPFIPTLPVAPTKDVLAQAFRRPDILEMARNSPYGYRMKPRLGTALQLLEATEEVAGRMEEVEHPFLLLQGDADVVTCPEVIKEFHAKAGSKDKELKLYEGMWHSLVGGELEPHIERVYGDMFAWLERQL------LKQGKEEEEDKEEEEKAEVREVEGMARRRSTRRS 397
            MVL+TPA L L  YA+VI+W++W  FRML+  H+   ++ V+ YGEDRR++PY APC IP HI   EK+++N+RGMLL+TC W P H+ ++P+AL+ QCCGFAD+NTFLPM RSIRLA++GF VVGMDPEGHGRSDGLHAYVPSF  LVEDYWQ+F ++I +N AYAGLP FLLGESMGGNV +QLLLRD  E+        ++F GA+ LAPM+++SP +KPP+ LV  LR +APF+PTLPV PTKD+L++AFRR ++L MA+ +PYGYR+KPRLGTALQLLEATE V  R  EV+HP+LLLQGD+DVVTCPE +K FHAK+GS++KELKLYEGMWHSL+ GELE +IE VY D+FAWL+R+L       + G+ ++E   +    +    +G ARRRS RR+
Sbjct:    1 MVLDTPALLGLVIYAIVISWLSWLLFRMLFPPHASPATLHVRDYGEDRRKIPYVAPCAIPEHIVCKEKYILNSRGMLLHTCEWWPQHVGDKPRALVVQCCGFADSNTFLPMTRSIRLAQQGFAVVGMDPEGHGRSDGLHAYVPSFAALVEDYWQWFTRDIRSNSAYAGLPTFLLGESMGGNVVVQLLLRDGLEQT-------NYFQGAIMLAPMLEVSPRMKPPKALVTFLRHLAPFLPTLPVTPTKDLLSKAFRRAEVLAMAQKAPYGYRLKPRLGTALQLLEATELVTQRASEVQHPYLLLQGDSDVVTCPETVKVFHAKSGSREKELKLYEGMWHSLLSGELEENIETVYRDIFAWLDRRLSPEEDEKRPGRGQQEGNSKGILVQDGSRDGEARRRSGRRT 397
The following BLAST results are available for this feature:
BLAST of NO22G00760.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21424.12.300e-14161.39esterase lipase thioesterase family protein [Nanno... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00760NO22G00760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G00760.1NO22G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G00760.1.cds1NO22G00760.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G00760.1.cds2NO22G00760.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G00760.1.cds3NO22G00760.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G00760.1 ID=NO22G00760.1|Name=NO22G00760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2001bp
TCGGCGAGAAGCGATAATAGCTGTTAGAATGCCAGGCAACATTTCTACGT
CTGGCACCCTTGACAAACACTGTAGACTTCCTTTGTCTGCACCAAATCAT
GCTCCACGTCGCAGCACAGGCGCGACGACTGCTGCGACGTATAAGTACAC
TTTATTCACAAGACCGAAAAGACCTCCTCCCTCATCGCCCACGCATAACG
CACACGCAAGCAGTGAACAAGTCAGCCACTTTGCCCTGTAGCATCACGTC
GAAGCCAAAGCCACGCATATCTTTCCCGATCTGACTCAAGAACAGACACG
CACCAGCGGCCTCGCATTCCTCCATCTCTGCTGCACGCCCAAGCCTCTAT
TTTTCTAACACCATGGTTCTCAATACCCCGGCCGGGCTGTTGCTTGCTGC
TTACGCCCTGGTGATCACATGGGTCGCGTGGTACTTCTTCCGCATGCTAT
GGGGTCATCATTCGCAGGAGGAAAGTATGGTGAAGCACTACGGAGAAGAC
CGTCGTCGAGTGCCTTATGCTGCCCCTTGTCCCATCCCCTCGCATATCTC
TCTTACTGAGAAATTCGTTATGAACGCGCGTGGGATGTTGCTTTATACCT
GTGCATGGCATCCCTCTCACATAGAGAGACCCAAGGCCTTGATTTTCCAG
TGTTGTGGTTTTGCCGATACTAACACCTTCCTGCCCATGATGCGATCCAT
CCGGCTGGCCGAGCGCGGCTTTGTGGTGGTAGGAATGGATCCGGAGGGCC
ACGGACGAAGCGATGGATTGCATGCCTACGTCCCTTCGTTCCCTACCTTG
GTGGAAGATTACTGGCAATTTTTCATTAAGGAGATTATGACGAATCCCGC
CTATGCTGGTCTACCCGTTTTCCTTCTAGGGGAAAGCATGGGGGGAAATG
TCGCTATCCAACTCTTGCTCCGCGATCGGACAGAGAAGAAAAAGAACCCC
AAAAAACACAAGTCTTTCTTTGCTGGGGCTGTCTTCCTCGCCCCGATGGT
AAAAATCTCTCCTGCGTTAAAGCCCCCTGAATGCCTCGTCAATCTGCTTC
GGCAAGTGGCACCTTTCATCCCCACCTTGCCGGTGGCGCCGACGAAGGAC
GTCTTGGCCCAGGCGTTTCGACGACCGGATATACTGGAAATGGCGCGAAA
TTCCCCGTATGGATACAGAATGAAGCCGCGGCTAGGGACGGCATTGCAGC
TCCTGGAGGCCACGGAGGAAGTGGCTGGGCGCATGGAGGAGGTGGAGCAT
CCTTTCCTCCTCTTACAAGGTGACGCCGACGTTGTCACATGCCCGGAAGT
GATCAAGGAATTTCATGCCAAAGCCGGCAGCAAGGACAAGGAACTTAAGC
TGTACGAAGGAATGTGGCACTCCCTCGTGGGAGGGGAGCTAGAGCCGCAC
ATAGAGAGGGTGTACGGTGATATGTTCGCTTGGTTGGAGAGGCAATTATT
GAAGCAGGGGAAGGAAGAAGAGGAGGACAAAGAGGAGGAAGAGAAAGCGG
AAGTGCGGGAAGTGGAGGGAATGGCGCGTCGGCGGAGCACGCGACGGTCG
GTCAAGGTTTCGGGTTAGAGGAAAGGGAGGGAGGGAGAGAGAGGGAGGGA
GGGAGGGAGAGAGAACGAGGCAGTCGGTCTATAGCCGAGGGAGCAAAATT
TAAAAAACAAAGGACGTGTACAAAACCTGACACAGGTAATTAAAGTCGAA
ATGCCCTATTATTAATGCCGTCAAATGGATCTGAAGATGCTGCTTCTTTC
TTTCATGTATTTAATCTTTGTGCATGCATTTCCACTTCTTTATTCGCCCC
CCTCCGTCTACTTCCTCCACACAGCGGTAATGTGAACACGTGGCTTGCCC
GCGTCCTCCATCCCTTTCCCCCTCCCTTTCTCGCTTTCTTCCTTTGTCGT
CTCCCCTCCCTTCCTCTCTACTCTCTTCTTCTCACACCATGAGGCGCATA
CATTTAATCTATGTCCAGTGTACGCCAGGGGACACCCTCCTCCCCTCCCT
C
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protein sequence of NO22G00760.1

>NO22G00760.1-protein ID=NO22G00760.1-protein|Name=NO22G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MVLNTPAGLLLAAYALVITWVAWYFFRMLWGHHSQEESMVKHYGEDRRRV
PYAAPCPIPSHISLTEKFVMNARGMLLYTCAWHPSHIERPKALIFQCCGF
ADTNTFLPMMRSIRLAERGFVVVGMDPEGHGRSDGLHAYVPSFPTLVEDY
WQFFIKEIMTNPAYAGLPVFLLGESMGGNVAIQLLLRDRTEKKKNPKKHK
SFFAGAVFLAPMVKISPALKPPECLVNLLRQVAPFIPTLPVAPTKDVLAQ
AFRRPDILEMARNSPYGYRMKPRLGTALQLLEATEEVAGRMEEVEHPFLL
LQGDADVVTCPEVIKEFHAKAGSKDKELKLYEGMWHSLVGGELEPHIERV
YGDMFAWLERQLLKQGKEEEEDKEEEEKAEVREVEGMARRRSTRRSVKVS
G*
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mRNA from alignment at chr22:248836..251204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G00760.1 ID=NO22G00760.1|Name=NO22G00760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2369bp|location=Sequence derived from alignment at chr22:248836..251204- (Nannochloropsis oceanica)
TCGGCGAGAAGCGATAATAGCTGTTAGAATGCCAGGCAACATTTCTACGT
CTGGCACCCTTGACAAACACTGTAGACTTCCTTTGTCTGCACCAAATCAT
GCTCCACGTCGCAGCACAGGCGCGACGACTGCTGCGACGTATAAGTACAC
TTTATTCACAAGACCGAAAAGACCTCCTCCCTCATCGCCCACGCATAACG
CACACGCAAGCAGTGAACAAGTCAGCCACTTTGCCCTGTAGCATCACGTC
GAAGCCAAAGCCACGCATATCTTTCCCGATCTGACTCAAGAACAGACACG
CACCAGCGGCCTCGCATTCCTCCATCTCTGCTGCACGCCCAAGCCTCTAT
TTTTCTAACACCATGGTTCTCAATACCCCGGCCGGGCTGTTGCTTGCTGC
TTACGCCCTGGTGATCACATGGGTCGCGTGGTACTTCTTCCGCATGCTAT
GGGGTCATCATTCGCAGGAGGAAAGTATGGTGAAGCACTACGGAGAAGAC
CGTCGTCGAGTGCCTTATGCTGCCCCTTGTCCCATCCCCTCGCATATCTC
TCTTACTGAGAAATTCGTTATGAACGCGCGTGGGATGTTGCTTTATACCT
GTGCATGGCATCCCTCTCACATAGAGAGACCCAAGGCCTTGATTTTCCAG
TGTTGTGGTTTTGCCGATACTAACACCTTCCTGCCCATGATGCGATCCAT
CCGGCTGGCCGAGCGCGGCTTTGTGGTGGTAGGAATGGATCCGGAGGGCC
ACGGACGAAGCGATGGATTGCATGCCTACGTCCCTTCGTTCCCTACCTTG
GTGGAAGATTACTGGCAATTTTTCATTAAGGAGATTATGACGAATCCCGC
CTATGCTGGTCTACCCGTTTTCCTTCTAGGGGAAAGCATGGGGGGAAATG
TCGCTATCCAACTCTTGCTCCGCGATCGGACAGAGAAGAAAAAGAACCCC
AAAAAACACAAGTCTTTCTTTGCTGGGGCTGTCTTCCTCGCCCCGATGGT
AAAAATCTCTCCTGCGTTAAAGCCCCCTGAATGCCTCGTCAATCTGCTTC
GGCAAGTGGCACCTTTCATCCCCACCTTGCCGGTGGCGCCGACGAAGGAC
GTCTTGGCCCAGGCGTTTCGACGACCGGATATACTGGAAATGGCGCGAAA
TTCCCCGTATGGATACAGAATGAAGCCGCGGCTAGGGACGGCATTGCAGG
TACGGCCAAGAAAGGAAGAAGAAAAAGAGGGAGGGAGGGAGGGAGTGAGG
GAGGGGAGATGCGGGTATCACGATTCGGTATGCCAGCGCTTTGCTTTTAT
CGATTCGGCTCCACCCATGTAATCGCTTGCCCCCCTTCCCTCCCTCCTTC
CCATCCTCCCTGACTCAGCTCCTGGAGGCCACGGAGGAAGTGGCTGGGCG
CATGGAGGAGGTGGAGCATCCTTTCCTCCTCTTACAAGGTGACGCCGACG
TTGTCACATGCCCGGAAGTGATCAAGGTAATGAATACTTAGGACTTAACA
TAGTGAAGCGTTTATAAGCGTAGGGAGGGTAGGAGGGGATGAGAGGGAGA
GGAAGCTGGGAACGGACGTCCCGTCCCTTGGGAGCATGGGAATTTCGTAG
GCTGTGTCTGAATTCCATCCCTCCCTCCCTCCCTCACTCACTCACTCACT
CCTTCACTCTCCTCACTGTCAACAGGAATTTCATGCCAAAGCCGGCAGCA
AGGACAAGGAACTTAAGCTGTACGAAGGAATGTGGCACTCCCTCGTGGGA
GGGGAGCTAGAGCCGCACATAGAGAGGGTGTACGGTGATATGTTCGCTTG
GTTGGAGAGGCAATTATTGAAGCAGGGGAAGGAAGAAGAGGAGGACAAAG
AGGAGGAAGAGAAAGCGGAAGTGCGGGAAGTGGAGGGAATGGCGCGTCGG
CGGAGCACGCGACGGTCGGTCAAGGTTTCGGGTTAGAGGAAAGGGAGGGA
GGGAGAGAGAGGGAGGGAGGGAGGGAGAGAGAACGAGGCAGTCGGTCTAT
AGCCGAGGGAGCAAAATTTAAAAAACAAAGGACGTGTACAAAACCTGACA
CAGGTAATTAAAGTCGAAATGCCCTATTATTAATGCCGTCAAATGGATCT
GAAGATGCTGCTTCTTTCTTTCATGTATTTAATCTTTGTGCATGCATTTC
CACTTCTTTATTCGCCCCCCTCCGTCTACTTCCTCCACACAGCGGTAATG
TGAACACGTGGCTTGCCCGCGTCCTCCATCCCTTTCCCCCTCCCTTTCTC
GCTTTCTTCCTTTGTCGTCTCCCCTCCCTTCCTCTCTACTCTCTTCTTCT
CACACCATGAGGCGCATACATTTAATCTATGTCCAGTGTACGCCAGGGGA
CACCCTCCTCCCCTCCCTC
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Coding sequence (CDS) from alignment at chr22:248836..251204-

>NO22G00760.1 ID=NO22G00760.1|Name=NO22G00760.1|organism=Nannochloropsis oceanica|type=CDS|length=1206bp|location=Sequence derived from alignment at chr22:248836..251204- (Nannochloropsis oceanica)
ATGGTTCTCAATACCCCGGCCGGGCTGTTGCTTGCTGCTTACGCCCTGGT
GATCACATGGGTCGCGTGGTACTTCTTCCGCATGCTATGGGGTCATCATT
CGCAGGAGGAAAGTATGGTGAAGCACTACGGAGAAGACCGTCGTCGAGTG
CCTTATGCTGCCCCTTGTCCCATCCCCTCGCATATCTCTCTTACTGAGAA
ATTCGTTATGAACGCGCGTGGGATGTTGCTTTATACCTGTGCATGGCATC
CCTCTCACATAGAGAGACCCAAGGCCTTGATTTTCCAGTGTTGTGGTTTT
GCCGATACTAACACCTTCCTGCCCATGATGCGATCCATCCGGCTGGCCGA
GCGCGGCTTTGTGGTGGTAGGAATGGATCCGGAGGGCCACGGACGAAGCG
ATGGATTGCATGCCTACGTCCCTTCGTTCCCTACCTTGGTGGAAGATTAC
TGGCAATTTTTCATTAAGGAGATTATGACGAATCCCGCCTATGCTGGTCT
ACCCGTTTTCCTTCTAGGGGAAAGCATGGGGGGAAATGTCGCTATCCAAC
TCTTGCTCCGCGATCGGACAGAGAAGAAAAAGAACCCCAAAAAACACAAG
TCTTTCTTTGCTGGGGCTGTCTTCCTCGCCCCGATGGTAAAAATCTCTCC
TGCGTTAAAGCCCCCTGAATGCCTCGTCAATCTGCTTCGGCAAGTGGCAC
CTTTCATCCCCACCTTGCCGGTGGCGCCGACGAAGGACGTCTTGGCCCAG
GCGTTTCGACGACCGGATATACTGGAAATGGCGCGAAATTCCCCGTATGG
ATACAGAATGAAGCCGCGGCTAGGGACGGCATTGCAGCTCCTGGAGGCCA
CGGAGGAAGTGGCTGGGCGCATGGAGGAGGTGGAGCATCCTTTCCTCCTC
TTACAAGGTGACGCCGACGTTGTCACATGCCCGGAAGTGATCAAGGAATT
TCATGCCAAAGCCGGCAGCAAGGACAAGGAACTTAAGCTGTACGAAGGAA
TGTGGCACTCCCTCGTGGGAGGGGAGCTAGAGCCGCACATAGAGAGGGTG
TACGGTGATATGTTCGCTTGGTTGGAGAGGCAATTATTGAAGCAGGGGAA
GGAAGAAGAGGAGGACAAAGAGGAGGAAGAGAAAGCGGAAGTGCGGGAAG
TGGAGGGAATGGCGCGTCGGCGGAGCACGCGACGGTCGGTCAAGGTTTCG
GGTTAG
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Synonyms
Publications