NO22G00650.1, NO22G00650.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G00650.1
Unique NameNO22G00650.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length513
Alignment locationchr22:221554..222379 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:221554..222379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00650.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00650NO22G00650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G00650.1NO22G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G00650.1.cds1NO22G00650.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G00650.1.cds2NO22G00650.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G00650.1 ID=NO22G00650.1|Name=NO22G00650.1|organism=Nannochloropsis oceanica|type=mRNA|length=513bp
ATGACTGACCATGTCTCGGACGACCAGTCACTCCCCCTGTCCACCTGTAC
CCATTCCTCGAACATTTCGTTCTCGTCGGCCTCGTCATCGCTACCCCTGT
CGTCGTCGTCATCCTCTACAACGATCCGACACACAATCGCCGACACCCAT
ACAGGCCTGGAATGCGCGGCCCGCTTATTGGAGATGGTGGAGAAGACTGA
GAGGAGCCCGCCGGGCCAGGAAACATCCGGTTATCCATCACATCAAGGCC
AAGCAAATCACGCTGCTGCAAGGGGAATAGGAGGAGGAGGAAGGAGGGAG
GGGGGTAGTATGGTGAAACGCCCGCTGCCACCATTCAGCTCCCAGCCAGA
GCACCATCATCAAGACGAGCAGCAACAGCAGCAGCAGCAAGTATACAACC
ACAAACAAAAAGTCGCTACCTCCTCCACCGATTTTATCCGCAACCATCAC
ATCCTCCAGCAGGAACAGCAGCAGTCGTCGCAACAGCAACAGCAACAGCA
GCCAGAAACGTGA
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protein sequence of NO22G00650.1

>NO22G00650.1-protein ID=NO22G00650.1-protein|Name=NO22G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=171bp
MTDHVSDDQSLPLSTCTHSSNISFSSASSSLPLSSSSSSTTIRHTIADTH
TGLECAARLLEMVEKTERSPPGQETSGYPSHQGQANHAAARGIGGGGRRE
GGSMVKRPLPPFSSQPEHHHQDEQQQQQQQVYNHKQKVATSSTDFIRNHH
ILQQEQQQSSQQQQQQQPET*
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mRNA from alignment at chr22:221554..222379+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G00650.1 ID=NO22G00650.1|Name=NO22G00650.1|organism=Nannochloropsis oceanica|type=mRNA|length=826bp|location=Sequence derived from alignment at chr22:221554..222379+ (Nannochloropsis oceanica)
ATGACTGACCATGTCTCGGACGACCAGTCACTCCCCCTGTCCACCTGTAC
CCATTCCTCGAACATTTCGTTCTCGTCGGCCTCGTCATCGCTACCCCTGT
CGTCGTCGTCATCCTCTACAACGATCCGACACACAATCGCCGACACCCAT
ACAGGCCTGGAATGCGCGGCCCGCTTATTGGAGATGGTGGAGAAGACTGA
GAGGAGCCCGCCGGGCCAGGAAACATCCGGTTATCCATCACATCAAGGCC
AAGCAAATCACGCTGCTGCAAGGGGAATAGGAGGAGGAGGAAGGAGGGAG
GGGGGTAGTATGGTGAAACGCCCGCTGCCACCATTCAGCTCCCAGCCAGA
GCACCATCATCAAGACGAGCAGCAACAGCAGCAGCAGCAAGTATACAACC
AGTACAGGCAAGTTCGAGCCGTCTCAGGCAAGAACACTGCTGTCTCCTTC
CCCCCCCCCCTCCTCCTCCTCCTCCTCAATCCTTCCTCCCCGCTCAACGT
CGTTGGAAGCTTACGTCTTCCCGGGTTTTCCGTGTGCACAAGTCCTCGAG
CTGTGGGGACATTGCTCACTTGATGGTACCTACCGCCCTAGCCCCAAACG
TGCTGTCTGGTGCTGCCACTGCTTCATACAGTAACAGCAACAGAGTTAGT
TTACCCAAGCCTGAGGGAGCAGCAGGAGATAAGAGCGTCAGTTGTTCGTC
CCTTCCTTCCGTAGCAAACAAAAAGTCGCTACCTCCTCCACCGATTTTAT
CCGCAACCATCACATCCTCCAGCAGGAACAGCAGCAGTCGTCGCAACAGC
AACAGCAACAGCAGCCAGAAACGTGA
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Coding sequence (CDS) from alignment at chr22:221554..222379+

>NO22G00650.1 ID=NO22G00650.1|Name=NO22G00650.1|organism=Nannochloropsis oceanica|type=CDS|length=513bp|location=Sequence derived from alignment at chr22:221554..222379+ (Nannochloropsis oceanica)
ATGACTGACCATGTCTCGGACGACCAGTCACTCCCCCTGTCCACCTGTAC
CCATTCCTCGAACATTTCGTTCTCGTCGGCCTCGTCATCGCTACCCCTGT
CGTCGTCGTCATCCTCTACAACGATCCGACACACAATCGCCGACACCCAT
ACAGGCCTGGAATGCGCGGCCCGCTTATTGGAGATGGTGGAGAAGACTGA
GAGGAGCCCGCCGGGCCAGGAAACATCCGGTTATCCATCACATCAAGGCC
AAGCAAATCACGCTGCTGCAAGGGGAATAGGAGGAGGAGGAAGGAGGGAG
GGGGGTAGTATGGTGAAACGCCCGCTGCCACCATTCAGCTCCCAGCCAGA
GCACCATCATCAAGACGAGCAGCAACAGCAGCAGCAGCAAGTATACAACC
ACAAACAAAAAGTCGCTACCTCCTCCACCGATTTTATCCGCAACCATCAC
ATCCTCCAGCAGGAACAGCAGCAGTCGTCGCAACAGCAACAGCAACAGCA
GCCAGAAACGTGA
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Synonyms
Publications