NO21G02500.1, NO21G02500.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G02500.1
Unique Name	NO21G02500.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3265
Alignment location	chr21:756969..762243 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:756969..762243 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G02500.1 vs.
Match: EWM27967.1 (alpha beta hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 189.1 bits (479), Expect = 5.200e-44
Identity = 107/256 (41.80%), Postives = 149/256 (58.20%), Query Frame = 0

Query:  405 YHHPRASSPPPIRAVALLLHGVTGNTYDHYELAERLSHA-GILAVGFDRRGHGGLPLRRARFNTTGDQEDLKEVIDVVRGRYTGLPLFAVGYSAGSSLLGRYLGEQGEDSHIDGAVLVSPGFDMEEAILMGHLHPLADYYLTQTAKQLFLEGLGKDVPLSKQQDQAVRRLKTSRSMREFHAELHHFSGHENVDEYFKANNPAPLLKDIARPTLFINSNDDMMFPKKLIQQWLWLASANENIALVQTRWGGHCCFYE 660
            YH P     PPI    ++ HGV  N  D Y+    ++   G +   F+RRG+  +PL RARFNT GDQ D + ++  +R  +     + VG SAGSSLL RYLG+ GE+  ++G VL+S G+DME  + + H+ PLAD  +T  AK  FLE    +  L++Q    ++RLK SRSM+EFH  LH F G  + +EYF+ +NPA +L  IARP ++IN+ DDM FP     Q+  L    +   +V    GGH  FYE
Sbjct:  154 YHMPCDERLPPI---VIICHGVFQNGADLYDFCRFMTETCGYVVCVFNRRGND-MPLSRARFNTVGDQADFRFILSRLREFFPNNGFYGVGISAGSSLLARYLGDAGEECELEGGVLISGGYDME--LSLRHMTPLADLVVTTQAKSFFLE--RNEETLARQDGPGLQRLKRSRSMQEFHEHLHVFDGKASREEYFQTHNPALVLDRIARPVVYINAYDDMCFPGHFTFQYKHLVERCQLATIVHMERGGHGTFYE 401

The following BLAST results are available for this feature:

BLAST of NO21G02500.1 vs.

BLAST of NO21G02500.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27967.1	5.200e-44	41.80	alpha beta hydrolase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G02500	NO21G02500	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02500.1	NO21G02500.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02500.1.cds1	NO21G02500.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds2	NO21G02500.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds3	NO21G02500.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds4	NO21G02500.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds5	NO21G02500.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds6	NO21G02500.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds7	NO21G02500.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds8	NO21G02500.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds9	NO21G02500.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds10	NO21G02500.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02500.1.cds11	NO21G02500.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:756969..762243-
coding sequence from alignment at chr21:756969..762243-

mRNA sequence

>NO21G02500.1 ID=NO21G02500.1|Name=NO21G02500.1|organism=Nannochloropsis oceanica|type=mRNA|length=3265bp
ATGTACCTCGTCAGCCGGCGCAGGGCAGCTGCTGGAACACCACATCACCC
CGCGCCTCGTCTCGCCTTCCTGATCCAGAACAATTTCAACCGCGAGGAGC
TGAAGATCGACGTTCGATGCGGCCACGCCTTTGCTGCCACCGTCGATGCC
TCACATATTCTGCTCAGGCCTGGACTCACAAAAATGCCACTTCCTTCCAA
CCTCCCTTCATCCTTCCACAGCATGGATCCCTTCATCGCCCACCGCGTGT
GGACCTCCACATCAGCCTCAGAGCCCTCGACCAGCTCGGCCCCTCCCCTC
TTCTCGTCCACGCCACCTCTTGCCCCCGTGACACCCCTCCTGGCTTCCCT
TGCACCCACGCTCCTTTCTGACGGCCTTCCTGGGCATCGACCATTCGGCA
TGGACTTTGAGGCGTATATGACTTTGGTGACGTGTGTTTTGATCCTCGTC
GTTTGGGTGGGAGGCGTGGCCCTATGGTATCTCTACTGCATCCGTCGCCC
TCCTCGTCTATACTTAGGACGAGGGGCCCTTATCCGCGCTGTCACGGACG
ACTGTCCGAGCCTGAAGAAGCCTTATTGTCCTCCCATTTGGTGCATCTCG
CCTTGGGCACAGGCTGGGGTCTCGATGCAGCGCAACACGTCCATCCGTGC
CCAGCTCTGTCGCCTGGTAGGGAGTGATGACGAGGAGAAGCAGCAGCGGC
AGCAGCAGCAGCAGCCTCAGCAGAAGGAGGAGGAGGAAGATGACTGTGAG
GAGGAACGGACAGTCGTCCACTCTTGGCAGAGGAAGGAGGAGAGAGAATT
GGAAGACGAGGAGGAGGAAGAAGTGACAGAGATAGCAGCAGCAGCAGCAG
CAACGACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACA
GCAACAACAACAACAACAGCGACAGCAACAGCAACAGCAGCAGCAACAAG
AAGAAAGGTCTCTCGTCCCCACTACCCGAAAGCAGGGCGCCCTCCCCTCG
CACCCTCGCCTTCCTTCCCTTCCTCCCCTCCCGGCAACAGCAACCCCCCC
TCCTCCTCGCCCTCCTCCCCGTCCCAACAAAAGCGAGGATGTACTACCAC
CACTACCTCCAGCAGCAGCAGGAGCAGGAGCAGCCGCAGCAAGACCAGAC
GGTATCCTCTTAGGAGAGAGCTCATCACACTGAGCGATGAGCAACAAATC
TACCTCCACTGGTACCACCACCCCCGTGCCTCCTCCCCCCCCCCGATCCG
AGCCGTAGCCCTCCTCCTGCATGGTGTGACGGGGAACACATACGACCACT
ACGAGCTCGCGGAACGTCTCTCACATGCCGGCATCCTCGCCGTGGGCTTT
GACAGACGAGGCCATGGCGGCCTTCCGTTACGTCGGGCCCGTTTCAACAC
CACGGGCGACCAGGAGGATTTGAAAGAAGTGATTGATGTGGTGCGAGGAC
GATACACGGGCCTGCCTCTCTTTGCCGTCGGGTACTCCGCGGGCTCCTCC
CTGCTTGGACGGTACCTGGGCGAGCAAGGAGAAGATTCGCACATCGACGG
TGCCGTCCTCGTCTCTCCCGGCTTCGACATGGAGGAGGCCATCCTCATGG
GTCATTTGCACCCACTGGCCGATTATTACCTGACACAGACGGCCAAACAA
TTGTTCCTCGAAGGCCTGGGAAAGGACGTACCCCTCTCCAAGCAGCAAGA
CCAGGCCGTGCGTCGCCTCAAGACGAGTCGGTCCATGCGCGAATTCCACG
CGGAGCTTCATCATTTCTCCGGCCACGAGAACGTTGATGAGTATTTCAAG
GCCAACAACCCAGCCCCCCTCCTCAAGGACATCGCCCGGCCCACCCTCTT
CATCAACAGCAACGATGACATGATGTTTCCCAAGAAACTAATCCAGCAGT
GGCTGTGGTTGGCCTCTGCCAACGAGAATATTGCCCTGGTTCAGACGCGG
TGGGGCGGGCACTGCTGCTTCTACGAGGGCGCACTCTCCCTTCAACCCAT
CTCATGGGCTGAGCGGGTGGTGGAAGAATTCCTCACCGCCCTCGCCCTCC
GCCCTTCCCTCCTCTTTGCCCGTCGGCCCTCCCTCCCGCCCTCCCTCCCT
TCCTCCCCGATGGCCACGCACAGCAGGGGGGAGGAGGGGGAGGAAGAGGA
GGAGGAAGAGAACGAGGTTTGGATACAGCGCTCCCTCTCCTCTACCTCCT
CTACAGCCTCGAATTCCTCCTGGTCCTCCTCCACCTCCTTCTCCCGCTCT
CGTCTCGCCTCTTCCCCCCCCTCCTTCCCTCCCTCCCTCCCTCCCTGCCC
CGGGATGAGAACGAGGTGGCTGGCCGACCAGGGGAGGGAGAGGGGGAGGA
CGAGGGGAAGGAAGATCGAAAAGAGGCGGTGAAGGGTGTATTAAGTCGCG
CGGGGCTGGTGGGTTGGGCATTAACGCTTGTTGTCGTTCTTGGCCTGTTC
GCCTCGCAGCCCCTGCGGCTCCCAGGCGCCATCCGATGAGAGAGCGAGAA
ACACCAATAGAGAAAGGGAGGGAAGAGTGGCGGGAAAAAAGGAAGGAAAG
AGAGTGAAGAGGTAGGGGGAGGAGGGAATATTTGGTGGAGAGAGAGGGAG
AGAGAGACAGGGAGGGAGAGGAAGAGAGAGAGGAGACAAGTGGGAGTCTG
TGTGTATGAAGATAGGAAGGGAGAGAGAAGACACACACACAGAGCGAAAT
GAGTGAAGATAGTGAGAAGAGGGAGAGACCAATGTACATGCATACACACA
TAGAGGCAAAAGTAATGACAGTGTGCATGTCGATTTTATTTATTTCTCCA
TTTGTCGGTGTACAATTATAGATAGATGTGTTCAATCAACGAACCGCTAA
ATTCTTTCGAAGTCCCCCCTTGCACTGCAGGCTGCGACATGAAGAAGTCG
AGCAAATCACACAACTAGAACAACCATAACATTAACAAGAAAAGGAGGAA
AAGAGGTCCGGCAATGATGGAGAAAAACAAGACAAGGAGAAGCCCCGTGA
GACTCGACGAGTCCTCAAGAAAGAAAAACAAACAATCAATTGGGAAGACA
ACGAGAGAAAGAAGGAAAAGCTAACGCGAGTAATGGCGAGAAGATACACA
GGATCTGAGAGAGAGAGAGAGAACAAAAATGACACAAAGAAAGAAAAGTA
CGTTAAGGGAAAGCCTTTTAAGAGTGTTTATCGAAGAAAGGTCATGCATC
TATAAGGATTAAAATTAGGCATGAACGAGGTGCGGAAAGAAGGAAGAAAA
GCCATGCATTTCCCT

protein sequence of NO21G02500.1

>NO21G02500.1-protein ID=NO21G02500.1-protein|Name=NO21G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=794bp
MYLVSRRRAAAGTPHHPAPRLAFLIQNNFNREELKIDVRCGHAFAATVDA
SHILLRPGLTKMPLPSNLPSSFHSMDPFIAHRVWTSTSASEPSTSSAPPL
FSSTPPLAPVTPLLASLAPTLLSDGLPGHRPFGMDFEAYMTLVTCVLILV
VWVGGVALWYLYCIRRPPRLYLGRGALIRAVTDDCPSLKKPYCPPIWCIS
PWAQAGVSMQRNTSIRAQLCRLVGSDDEEKQQRQQQQQPQQKEEEEDDCE
EERTVVHSWQRKEERELEDEEEEEVTEIAAAAAATTTTTTTTTTTATTTT
ATTTTTATATATAAATRRKVSRPHYPKAGRPPLAPSPSFPSSPPGNSNPP
SSSPSSPSQQKRGCTTTTTSSSSRSRSSRSKTRRYPLRRELITLSDEQQI
YLHWYHHPRASSPPPIRAVALLLHGVTGNTYDHYELAERLSHAGILAVGF
DRRGHGGLPLRRARFNTTGDQEDLKEVIDVVRGRYTGLPLFAVGYSAGSS
LLGRYLGEQGEDSHIDGAVLVSPGFDMEEAILMGHLHPLADYYLTQTAKQ
LFLEGLGKDVPLSKQQDQAVRRLKTSRSMREFHAELHHFSGHENVDEYFK
ANNPAPLLKDIARPTLFINSNDDMMFPKKLIQQWLWLASANENIALVQTR
WGGHCCFYEGALSLQPISWAERVVEEFLTALALRPSLLFARRPSLPPSLP
SSPMATHSRGEEGEEEEEEENEVWIQRSLSSTSSTASNSSWSSSTSFSRS
RLASSPPSFPPSLPPCPGMRTRWLADQGRERGRTRGRKIEKRR*

mRNA from alignment at chr21:756969..762243-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G02500.1 ID=NO21G02500.1|Name=NO21G02500.1|organism=Nannochloropsis oceanica|type=mRNA|length=5275bp|location=Sequence derived from alignment at chr21:756969..762243- (Nannochloropsis oceanica)
ATGTACCTCGTCAGCCGGCGCAGGGCAGCTGCTGGAACACCACATCACCC
CGCGCCTCGTCTCGCCTTCCTGATCCAGAACAATTTCAACCGCGAGGAGC
TGAAGATCGACGTTCGATGCGGCCACGCCTTTGCTGCCACCGTCGATGCC
TCACATATTCTGCTCAGGCCTGGACTCACAAAAATGCCACTTCCTTCCAA
CCTCCCTTCATCCTTCCACAGCATGGATCCCTTCATCGCCCACCGCGTGT
GGACCTCCACATCAGCCTCAGAGCCCTCGACCAGCTCGGCCCCTCCCCTC
TTCTCGTCCACGCCACCTCTTGCCCCCGTGACACCCCTCCTGGCTTCCCT
TGCACCCACGCTCCTTTCTGACGGCCTTCCTGGGCATCGACCATTCGGCA
TGGACTTTGAGGCGTATATGACTTTGGTGACGTGTGTTTTGATCCTCGTC
GTTTGGGTGGGAGGCGTGGCCCTATGGTATCTCTACTGCATCCGTCGCCC
TCCTCGTCTATACTTAGGTAAGTGATCATGCCCTCCTCCCCCTCATTCCT
GTTTTGCTGGTAGAGTGGTAGATCGTCTTCCCTCCCCACCCATTGAGCGG
TGTGCGTCTTCATTACCCCCCATGACCCATGTCTGTCTCGAAGTTGCTTC
CTATTGCTTCCTACTCTACTGGCCTGGATGACCCTTTTTTCGACACTGAC
CTTCCCTTGCCTCCCTCCTTCCCTCGCTTCCCCCCTTCACGCCAGGACGA
GGGGCCCTTATCCGCGCTGTCACGGACGACTGTCCGAGCCTGAAGAAGCC
TTATTGTCCTCCCATTTGGTGCATCTCGCCTTGGGCACAGGTAAGCGAAG
CAGAAGGAGGGAGAGAGGGGAGGAGGGAGGGATGGAGACATGAGACAAGT
ATAAGGGTAGGAGACATGAGAGTGAGTGTATGTTTGTTTGCGGTGTATAG
ACACTCGGCTGACTTATCTTCCCTTTCCTCACTTTTCCTTTCTCCGTCCT
ACCTCCCTTTCCTCCCTCCCCCCCTCCCTTACTTCCGCAGGCTGGGGTCT
CGATGCAGCGCAACACGTCCATCCGTGCCCAGCTCTGTCGCCTGGTAGGG
AGTGATGACGAGGAGAAGCAGCAGCGGCAGCAGCAGCAGCAGCCTCAGCA
GAAGGAGGAGGAGGAAGATGACTGTGAGGAGGAACGGACAGTCGTCCACT
CTTGGCAGAGGAAGGAGGAGAGAGAATTGGAAGACGAGGAGGAGGAAGAA
GTGACAGAGATAGCAGCAGCAGCAGCAGCAACGACAACAACAACAACAAC
AACAACAACAACAGCAACAACAACAACAGCAACAACAACAACAACAGCGA
CAGCAACAGCAACAGCAGCAGCAACAAGAAGAAAGGTCTCTCGTCCCCAC
TACCCGAAAGCAGGGCGCCCTCCCCTCGCACCCTCGCCTTCCTTCCCTTC
CTCCCCTCCCGGCAACAGCAACCCCCCCTCCTCCTCGCCCTCCTCCCCGT
CCCAACAAAAGCGAGGATGTACTACCACCACTACCTCCAGCAGCAGCAGG
AGCAGGAGCAGCCGCAGCAAGACCAGACGGTATCCTCTTAGGAGAGAGCT
CATCACACTGAGCGATGAGCAACAAATCTACCTCCACTGGTTCGTCACTA
GCCCTCCCTCCCTTCCTCCCTCCCTCCGAACCTCCCTCCCTCCCGCCCTC
CGTCCCTCCCTCAACAGGGCTTCTCCAGGCTTCTCCATCCACTCACCTTC
CTATCCCTCCCTCCCTCCCCCTCCTCTTCTCTTCCTCAGGTACCACCACC
CCCGTGCCTCCTCCCCCCCCCCGATCCGAGCCGTAGCCCTCCTCCTGCAT
GGTGTGACGGGGAACACATACGACCACTACGAGCTCGCGGAACGTCTCTC
ACATGCCGGCATCCTCGCCGTGGGCTTTGACAGGTACGTTCTTTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTT
CCTCCCTCTCTCCTTACTTGTCTGTATCCGCCCAGCAAGTCGGAGGTTTC
TCACCTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCATCGCAGACGAG
GCCATGGCGGCCTTCCGTTACGTCGGGCCCGTTTCAACACCACGGGCGAC
CAGGAGGATTTGAAAGAAGTGATTGATGTGGTGCGAGGACGATACACGGG
CCTGCCTCTCTTTGCCGTCGGGTACTCCGCGGGCTCCTCCCTGCTTGGAC
GGTGAGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAAAGAAGAGAGAGGG
AGGGATGAAAAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGAG
AGGGAGGAAGTGGAGGATGTCTAGGCCTAGCAATAAGTCGTCTTGCTTGT
CATGTCTTACTCACCCCATTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGCAGGTACCTGGGCGAGCAA
GGAGAAGATTCGCACATCGACGGTGCCGTCCTCGTCTCTCCCGGCTTCGA
CATGGAGGTACGTCTATCCTCCTTTCCTCCCTTCTTCCCTTCCTCCCTCC
TTCCCTCCCTCCTTCTCTCTCCACCCTTCCTTTCTTCCCTCCCTCGTTCC
CTCATAGCACAACCCTCCTTCCCTTTCTGTTTCTCCCTCCCTTCCTCCCT
CCCTCCCTCCCTCCCTCCTTCCTTCTCTTTCCACCCTTCATCCCTTGTTG
CTTCTCTCTTTCTCCCTCTCTCCCTCAATACAATGATTCGATTCGGTTTG
GCTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCAGGAGGC
CATCCTCATGGGTCATTTGCACCCACTGGCCGATTATTACCTGACACAGA
CGGCCAAACAATTGTTCCTCGAAGGCCTGGGAAAGGTAAGGAGGGAGGGA
GGGAGGGAAGATCGTACAGGATACACGTCCTCGTTTGTTTGTTTCTTTTT
CGTCGATCGCGGCGGCCTCGCCCGAGCCACTCCAATCATCCATCATCCCC
AACTCACCCCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAGGA
CGTACCCCTCTCCAAGCAGCAAGACCAGGCCGTGCGTCGCCTCAAGACGA
GTCGGTCCATGCGCGAATTCCACGCGGAGCTTCATCATTTCTCCGGCCAC
GAGAACGTTGATGAGTATTTCAAGGTCCGCCTTCCCTCCTTCCCTCTTTT
CCTTCTTTCTTTTTTACATGGCTCCCGTTGTCCCTCTTCATTTCCCTCTC
TTTTTCTTCCTCTCTCCCTCCCCCATTCGGTGTCCAACATGTCACGTGTC
CTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGC
CAACAACCCAGCCCCCCTCCTCAAGGACATCGCCCGGCCCACCCTCTTCA
TCAACAGCAACGATGTAAGCCTACCCTCCCTCCCTCCCTCCCTCTCTCCG
TCCCTCACTCCCTCCCTTGTTCTTTTCCTCCCTCTCCCACGCCCCCTCCC
TCGCCCCCTCCCTCCTTTCCCTGTGTCCAGCTCGGCCGGACCCATGAATC
CGCTCCTCCCCTTCACTCTCTCACTTCCCTCCTTCCCTCCCTCCCTCGCA
GGACATGATGTTTCCCAAGAAACTAATCCAGCAGTGGCTGTGGTTGGCCT
CTGCCAACGAGAATATTGCCCTGGTTCAGGTGAGGGAGAAGGAGGGAGGG
AAGGAGGGAGGGAGCCGTTTCAGTCAGGGTTTGAACGAAGCGTTCAGTCA
CAGGCACTCACTCACACCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCCT
GCAGACGCGGTGGGGCGGGCACTGCTGCTTCTACGAGGGCGCACTCTCCC
TTCAACCCATCTCATGGGCTGAGCGGGTGGTGGAAGAATTCCTCACCGCC
CTCGCCCTCCGCCCTTCCCTCCTCTTTGCCCGTCGGCCCTCCCTCCCGCC
CTCCCTCCCTTCCTCCCCGATGGCCACGCACAGCAGGGGGGAGGAGGGGG
AGGAAGAGGAGGAGGAAGAGAACGAGGTTTGGATACAGCGCTCCCTCTCC
TCTACCTCCTCTACAGCCTCGAATTCCTCCTGGTCCTCCTCCACCTCCTT
CTCCCGCTCTCGTCTCGCCTCTTCCCCCCCCTCCTTCCCTCCCTCCCTCC
CTCCCTGCCCCGGGATGAGAACGAGGTGGCTGGCCGACCAGGGGAGGGAG
AGGGGGAGGACGAGGGGAAGGAAGATCGAAAAGAGGCGGTGAAGGGTGTA
TTAAGTCGCGCGGGGCTGGTGGGTTGGGCATTAACGCTTGTTGTCGTTCT
TGGCCTGTTCGCCTCGCAGCCCCTGCGGCTCCCAGGCGCCATCCGATGAG
AGAGCGAGAAACACCAATAGAGAAAGGGAGGGAAGAGTGGCGGGAAAAAA
GGAAGGAAAGAGAGTGAAGAGGTAGGGGGAGGAGGGAATATTTGGTGGAG
AGAGAGGGAGAGAGAGACAGGGAGGGAGAGGAAGAGAGAGAGGAGACAAG
TGGGAGTCTGTGTGTATGAAGATAGGAAGGGAGAGAGAAGACACACACAC
AGAGCGAAATGAGTGAAGATAGTGAGAAGAGGGAGAGACCAATGTACATG
CATACACACATAGAGGCAAAAGTAATGACAGTGTGCATGTCGATTTTATT
TATTTCTCCATTTGTCGGTGTACAATTATAGATAGATGTGTTCAATCAAC
GAACCGCTAAATTCTTTCGAAGTCCCCCCTTGCACTGCAGGCTGCGACAT
GAAGAAGTCGAGCAAATCACACAACTAGAACAACCATAACATTAACAAGA
AAAGGAGGAAAAGAGGTCCGGCAATGATGGAGAAAAACAAGACAAGGAGA
AGCCCCGTGAGACTCGACGAGTCCTCAAGAAAGAAAAACAAACAATCAAT
TGGGAAGACAACGAGAGAAAGAAGGAAAAGCTAACGCGAGTAATGGCGAG
AAGATACACAGGATCTGAGAGAGAGAGAGAGAACAAAAATGACACAAAGA
AAGAAAAGTACGTTAAGGGAAAGCCTTTTAAGAGTGTTTATCGAAGAAAG
GTCATGCATCTATAAGGATTAAAATTAGGCATGAACGAGGTGCGGAAAGA
AGGAAGAAAAGCCATGCATTTCCCT

Coding sequence (CDS) from alignment at chr21:756969..762243-

>NO21G02500.1 ID=NO21G02500.1|Name=NO21G02500.1|organism=Nannochloropsis oceanica|type=CDS|length=2382bp|location=Sequence derived from alignment at chr21:756969..762243- (Nannochloropsis oceanica)
ATGTACCTCGTCAGCCGGCGCAGGGCAGCTGCTGGAACACCACATCACCC
CGCGCCTCGTCTCGCCTTCCTGATCCAGAACAATTTCAACCGCGAGGAGC
TGAAGATCGACGTTCGATGCGGCCACGCCTTTGCTGCCACCGTCGATGCC
TCACATATTCTGCTCAGGCCTGGACTCACAAAAATGCCACTTCCTTCCAA
CCTCCCTTCATCCTTCCACAGCATGGATCCCTTCATCGCCCACCGCGTGT
GGACCTCCACATCAGCCTCAGAGCCCTCGACCAGCTCGGCCCCTCCCCTC
TTCTCGTCCACGCCACCTCTTGCCCCCGTGACACCCCTCCTGGCTTCCCT
TGCACCCACGCTCCTTTCTGACGGCCTTCCTGGGCATCGACCATTCGGCA
TGGACTTTGAGGCGTATATGACTTTGGTGACGTGTGTTTTGATCCTCGTC
GTTTGGGTGGGAGGCGTGGCCCTATGGTATCTCTACTGCATCCGTCGCCC
TCCTCGTCTATACTTAGGACGAGGGGCCCTTATCCGCGCTGTCACGGACG
ACTGTCCGAGCCTGAAGAAGCCTTATTGTCCTCCCATTTGGTGCATCTCG
CCTTGGGCACAGGCTGGGGTCTCGATGCAGCGCAACACGTCCATCCGTGC
CCAGCTCTGTCGCCTGGTAGGGAGTGATGACGAGGAGAAGCAGCAGCGGC
AGCAGCAGCAGCAGCCTCAGCAGAAGGAGGAGGAGGAAGATGACTGTGAG
GAGGAACGGACAGTCGTCCACTCTTGGCAGAGGAAGGAGGAGAGAGAATT
GGAAGACGAGGAGGAGGAAGAAGTGACAGAGATAGCAGCAGCAGCAGCAG
CAACGACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACA
GCAACAACAACAACAACAGCGACAGCAACAGCAACAGCAGCAGCAACAAG
AAGAAAGGTCTCTCGTCCCCACTACCCGAAAGCAGGGCGCCCTCCCCTCG
CACCCTCGCCTTCCTTCCCTTCCTCCCCTCCCGGCAACAGCAACCCCCCC
TCCTCCTCGCCCTCCTCCCCGTCCCAACAAAAGCGAGGATGTACTACCAC
CACTACCTCCAGCAGCAGCAGGAGCAGGAGCAGCCGCAGCAAGACCAGAC
GGTATCCTCTTAGGAGAGAGCTCATCACACTGAGCGATGAGCAACAAATC
TACCTCCACTGGTACCACCACCCCCGTGCCTCCTCCCCCCCCCCGATCCG
AGCCGTAGCCCTCCTCCTGCATGGTGTGACGGGGAACACATACGACCACT
ACGAGCTCGCGGAACGTCTCTCACATGCCGGCATCCTCGCCGTGGGCTTT
GACAGACGAGGCCATGGCGGCCTTCCGTTACGTCGGGCCCGTTTCAACAC
CACGGGCGACCAGGAGGATTTGAAAGAAGTGATTGATGTGGTGCGAGGAC
GATACACGGGCCTGCCTCTCTTTGCCGTCGGGTACTCCGCGGGCTCCTCC
CTGCTTGGACGGTACCTGGGCGAGCAAGGAGAAGATTCGCACATCGACGG
TGCCGTCCTCGTCTCTCCCGGCTTCGACATGGAGGAGGCCATCCTCATGG
GTCATTTGCACCCACTGGCCGATTATTACCTGACACAGACGGCCAAACAA
TTGTTCCTCGAAGGCCTGGGAAAGGACGTACCCCTCTCCAAGCAGCAAGA
CCAGGCCGTGCGTCGCCTCAAGACGAGTCGGTCCATGCGCGAATTCCACG
CGGAGCTTCATCATTTCTCCGGCCACGAGAACGTTGATGAGTATTTCAAG
GCCAACAACCCAGCCCCCCTCCTCAAGGACATCGCCCGGCCCACCCTCTT
CATCAACAGCAACGATGACATGATGTTTCCCAAGAAACTAATCCAGCAGT
GGCTGTGGTTGGCCTCTGCCAACGAGAATATTGCCCTGGTTCAGACGCGG
TGGGGCGGGCACTGCTGCTTCTACGAGGGCGCACTCTCCCTTCAACCCAT
CTCATGGGCTGAGCGGGTGGTGGAAGAATTCCTCACCGCCCTCGCCCTCC
GCCCTTCCCTCCTCTTTGCCCGTCGGCCCTCCCTCCCGCCCTCCCTCCCT
TCCTCCCCGATGGCCACGCACAGCAGGGGGGAGGAGGGGGAGGAAGAGGA
GGAGGAAGAGAACGAGGTTTGGATACAGCGCTCCCTCTCCTCTACCTCCT
CTACAGCCTCGAATTCCTCCTGGTCCTCCTCCACCTCCTTCTCCCGCTCT
CGTCTCGCCTCTTCCCCCCCCTCCTTCCCTCCCTCCCTCCCTCCCTGCCC
CGGGATGAGAACGAGGTGGCTGGCCGACCAGGGGAGGGAGAGGGGGAGGA
CGAGGGGAAGGAAGATCGAAAAGAGGCGGTGA

Synonyms

Publications