Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr21 genome chr21:594229..600269 -
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G02030.3 vs.
Match: XP_021809450.1 (probable Xaa-Pro aminopeptidase P [Prunus avium])
HSP 1 Score: 469.5 bits (1207), Expect = 1.600e-128
Identity = 257/556 (46.22%), Postives = 347/556 (62.41%), Query Frame = 0
Query: 19 AAVLVALRQRMEAQG--LDALVIPSEDAHQSEYVSLKDRRREFMCGFTGSAGTAVVTPDQALLWTDGRYFLQAKQQLGPEWDLMKALEEGVPTVEVWLAKHLHETKGGGVVGVNGLLLNMAQARSWKLAFDPRNVSLKILDVDLVDEVWGAAQPPAPDAPVRVHPLIYAGQDVPAKLENLRKRLLEKSASALLLSALDEVAWLYNIRGSDIQYNPVVYAYSVVTDQEAVLFIDGEKLGEDVKEHLATAGVTVLPYTAITTYLKESLLPSLQAQEDTPPPPPPQQQQAQATTRKKKVVMMDPNQVSLALGSLIPTECIIEGPSPITLAKAIKNHAELRGMRQAHIRDGVALTSFLAWLEKAME---------GGKEAPAEVRGGLSWPLTEASIAKKLEDFRRKQEMFVSPSFATISAVGSNGAIIHYKPDDSTSAALIGSEERKGGKGGKEGVSDVLLLLDSGAQYLDGTTDVTRTVHFGNPTPEEKEAFTLVLRGHIALARARFPEGILGAKLDILARLPLWSVGLDYRHGTGHGVGAFLNVHEGPQSISYKKRA 564
A L ALR M + LDALV+PSED HQSEYVS +D+RREF+ GFTGSAG A+VT ++A LWTDGRYFLQA Q+L +W LM+ E+ P V++W+A +L G +G++ +++ A+ W+LAF ++ L +LVDEVW QPPA PV VHPL YAG+ V KL++LR+RL++++A +++SALDEVAWLYNIRGSD+ Y+PVV+A+++VT A ++D K+ +V +L G+ V Y ++++ + +LL S Q + +A + ++ DP AL S + E +I SP+ LAKA+KN EL G+++AHIRDG A+ +L WL+K + E + + + LTE + + KLE FR +E F SF TIS+VG N AIIHY P T A E D + L DSGAQYLDGTTD+TRTVHFG P+ EK +T VL+GHIAL ARFP G G LDILAR+PLW GLDYRHGTGHG+G++LNVHEGP IS++ A
Sbjct: 2 ADTLSALRSLMASHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTKNEARLWTDGRYFLQAAQELSDQWQLMRMGED--PAVDIWMADNL---PGDSAIGIDPWCVSIDTAQKWELAFSKKHHKLVQTSTNLVDEVW-KNQPPAEINPVIVHPLEYAGRSVADKLKDLRERLIQENARGIIISALDEVAWLYNIRGSDVSYSPVVHAFAIVTSNSAFFYVDKRKVSSEVNTYLEENGIEVRDYKSVSSDV--ALLASNQLKPSFKGTEITGNGTNKAEDKNDNLIWADPGSCCYALYSKLNPEKVILQQSPLALAKALKNPIELEGLKKAHIRDGAAVVQYLVWLDKQAQEIYGASGFFSEGEGTDKKKHSKTAKLTEVTASDKLEGFRASKENFRGLSFPTISSVGPNAAIIHYSPQAETCA---------------EFDPDSIYLFDSGAQYLDGTTDITRTVHFGKPSAHEKACYTAVLKGHIALGNARFPNGTNGHALDILARVPLWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPHA 534
The following BLAST results are available for this feature:
BLAST of NO21G02030.3 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
500 1000 1500 2000 2500 3000 Expect = 1.60e-128 / Id = 46.22 Sequence XP_021809450.1
Match Name E-value Identity Description
XP_021809450.1 1.600e-128 46.22 probable Xaa-Pro aminopeptidase P [Prunus avium] [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO21G02030.3 ID=NO21G02030.3|Name=NO21G02030.3|organism=Nannochloropsis oceanica|type=mRNA|length=3044bp back to top protein sequence of NO21G02030.3
>NO21G02030.3-protein ID=NO21G02030.3-protein|Name=NO21G02030.3|organism=Nannochloropsis oceanica|type=polypeptide|length=628bp back to top mRNA from alignment at chr21:594229..600269-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G02030.3 ID=NO21G02030.3|Name=NO21G02030.3|organism=Nannochloropsis oceanica|type=mRNA|length=6041bp|location=Sequence derived from alignment at chr21:594229..600269- (Nannochloropsis oceanica)ATGTCGCCCTCCTGCTCCTCCTCCTCC
TCCTCGCTGCGGCCGGTGCCTGGCTCCGCGGCCGTCTTAGTCGCCCTCCG
GCAGCGCATGGAAGCCCAGGGCCTCGACGCGCTCGTTATTCCCTCTGAAG
GTCAGTTCCACGACAAACCATGCTTGATTCCGTGCACGTCTTCCCACTTT
CTGGGAAATAATATCGGCAGATATCTGTGGAGGGCAATAGGTCACTTTTC
CTCCTCTAGATCCGCTAATACCTCACCTTTTCCTCCCTCCGTCCCTCCCC
CCACTCCCTCTCCCCTCCCCCTCCTTCAGACGCTCACCAGTCCGAATATG
TTTCCCTGAAGGACAGACGACGTGAGTTCATGTGTGGATTTACAGGCAGT
GCAGGCACGGCGGTCGTGACCCCGGACCAGGCTTTGCTTTGGACGGACGG
ACGCTATTTTTTGCAG GTGAGGAAACGGGAGACGAAAGAGGACAATGGAG
AGGAGGGAGGACTTGAAGCCACCATTAAATTGATAGATGAATCAACATAA
TGTAAGAAGCAGGTTCCAAGCACCTCTTCCGGCTTCTTATGACTCATTCT
TTCCCTACTTTTCCTTTCCCTTCTCCTTCCCTCCCTTAACCCTATCAGGG
GGTCTGATAAGATCGTTCGAAGAAGACTCTTCCTCACATCTCTCCCCCCC
CTCCCCCCCTTCCCTCCTCTCTTTCTTTCAGGCTAAACAACAGCTGGGGC
CGGAGTGGGATCTGATGAAGGCCCTAGAGGAGGGAGTGCCCACCGTGGAG
GTATGGTTGGCCAAGCATCTGCACGAGACCAAG GTGAGTGCGGGAAAGTG
GAAGGGAAAAAGAGAGGGAGATTACTATCTCAGGATTCAACAGACCCTTT
TTCTTGTCACTCGCGCATCACAACATCACTCCCAAGTGTACGAGCCACCA
CACGCCCTACCCACCTACCTACCCCTCCCCTCCAGGGCGGCGGCGTGGTA
GGAGTTAATGGCCTTCTCCTCAACATGGCTCAAGCCCGGAGCTGGAA GTA
CGTACCCTTTCCCTCCTCCCTCCCTCCCGCCTTCCCTCCCCCTCTCCAAT
CCTCCTTGGCCGCCTCTACTTTCGCTGCTCTCGCCCTGTCTCACTTTTGC
ACCCTCCCTCCCTCGCTCCCTCCCTCCCTCCCTCCCTTTCGTCCAGGCTG
GCTTTCGACCCCCGGAATGTCTCCTTAAAGATCCTGGACGTGGATTTGGT
CGACGAGGTCTGGGGCGCTGCCCAGCCCCCAGCTCCAG GTAGGGAGGGAC
GGACGGACGGACGGACGGACGGACGGACGGACGGACGGGGGGACGGAGGG
AAAGCGGTTCTTTCCTTCGGGCTTGCCTGACTCTCTTTCTATGTATGTCT
TCTTCCTCCAGGATCCTCAGTCCCCCCCTCCCTCCTTCTTCCCCTCCCCT
CCCTCCCTCCCTGCAGACGCCCCCGTCCGTGTCCATCCGTTGATTTATGC
GGGTCAGGACGTACCTGCCAAGCTCGAAAACCTCCGGAAGAGGCTGCTGG
AGAAG GTAGGCAGATGTATTTCCCCCCTCCCTCCCCACCTCCCTCCCTCC
CGCATATTCCCTCTCTCTCACAGAACGCCCACCTTCCGTCCCTCCCTCCC
TCCCTCCCTCCCTCCTTTCAGTCGGCCTCCGCCCTCCTCCTCTCGGCGCT
GGACGAGGTGGCCTGGCTCTACAATATCCGTGGGAGTGACATTCAGTACA
ACCCGGTAGTCTACGCCTACAGCGTGGTGACCGACCAAGAGGCAGTCTTG
TTCATCGACGGGGAGAAGCTGGGGGAGGACGTCAAGGAG GTACGACTTGC
CCTTTTCTCTCCTTTCCTCCCTCATTCCCACTCTGTCATACACCTACCTA
CCTCTCGCCCTCCCTCCCTCCCTCCCTCAGCACCTCGCCACCGCGGGTGT
CACTGTCCTGCCCTACACCGCCATCACCACCTACCTGAAGGAGAGCCTGC
TACCCTCGCTGCAAGCACAAGAAG GTTCGCATGCCCTGTCTTATTTCCTT
CCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTTCTCCGTGGATTTCTTTGA
GAAAGAATGTCTCCCATTCGTTTACTGCCTCCCCCTCTCCCTTCCTCTCC
CCCTCCTTCCCTCCCTCCCTCCCTCTCCTCCTTCCCTGGACGATACGCCA
AAAGACACTCCGCCTCCACCGCCGCCGCAGCAGCAGCAGGCCCAGGCAAC
GACGAGGAAGAAGAAGGTGGTGATGATGGACCCCAACCAAGTCTCTCTTG
CCTTGGGCTCCCTCATCCCCACAGAG GTAGGGAGGGAGGGGGAGGGGAAA
GGGAGGGAGGGAGCGGAGGGATTGAGTCCAGGCCAACTTATTCACCCACC
CGAGTCCACCCATTTTTAATTCCCCTCCTTCCCTCCCTCCTTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTCTTTCCTCCCCCTGTAGTGCATAATCG
AGGGTCCCTCTCCCATCACACTCGCCAAGGCCATCAAGAACCACGCCGAG
TTGCGGGGCATGCGACAG GTACCCACCTCCTCCCTCCCCTCTTCCCTCCC
CCCTCCTCCTCTCCCCTCTTTTCCCATCTATCCATACATTAATTCATCTA
TCCGTTCCTTCCCCCCCCTCCCTTTTCGCGCCAATCCACGCTCCCTCCCT
CCCTCCCTCCCGCCCTCAGGCTCACATCCGTGATGGGGTCGCGCTGACCT
CATTCCTGGCATGGCTGGAGAAGGCGATGGAGGGAGGGAAGGAGGCGCCG
GCGGAGGTGCGGGGGGGGCTGTCCTG GTACGAGGGGAAAGAGGGAAGAAG
GAAAGGAGGGAGGGAGGGAGGTAAAAGAGGAATGAGGGAGGGAGGGAGGA
AAGAAGTAGAAGAAGGAAAGGAGGGAGGGAGGGAAGGAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAGGAGAGGGGGAGGGAAG
AAAAAGAAGAAGAACAACAAGAAGAAAAGGAGGGAGGGAGGGAGGGAGGG
GGGTTACTTAATAGCGTGGGTAATGCGAGTTACTGCCTCTGATTCCTCGT
CCCCTCCCTCCCTCCCTCCCTCCCACCCTTCCTTCAGGCCTCTGACCGAG
GCCAGTATTGCCAAGAAGCTTGAGGATTTCAGGAGAAAGCAAGAAATGTT
TGTGTCGCCGAG GTAGGGAGGGAAGGAGGGAGGGAGGGAGGGAAAGAGAG
ATGAACACATGTGTTGGTGTTTGGTCTCGTGTCCTCACGCGAGCTCCTCC
CTCCCTCCCTCCCTCCTTACCCCGCCCCTGTTTTTCCCGAGCATGTCGTT
CACCATCTCAAACAAATAAACCTCGATCCCTTTGCCCTCCTTCCCTTCCT
CCCTTCCTCCCTCCCTCTTTTTCCCAGCTTTGCCACCATCTCGGCGGTCG
GCAGCAATGGCGCCATCATCCACTACAAGCCCGACGACTCGACGTCCGCG
GCCCTGATCGGGTCAGAAGAGCGAAAGGGGGGGAAGGGAGGGAAGGAGGG
AGTGAGTGACGTGCTGCTGCTTCTCGACAGTGGTGCGCAATACCTGGACG
GCACGACGGACGTGACGAGGACG GTGAGGGAGGGAGGGAGGGACGGACGG
ACGGAGGGAAGGGGGACTGGTCAGAGAGTCGAGGAAGGGAGGGAAGGAAG
AAGGAAGAAGGGAGGAGAGAGAGAGAGTGAGAAAAGGAGGCGACCCGCTC
CCTTGGCTCTTATTCGTTCCTCTTCTCATATAACATGGAACACCACAGGT
GCACTTCGGCAACCCGACCCCTGAAGAAAAAGAGGCATTTACTCTTGTCC
TCCGTG GTACGTCCTCCCTCCCTCCCTCCCTCCCTCCTTCTTTCCAGGCC
CTCTCGCGCAAGTCCCCGCTCGCCTTGCTAACGTTCACTGGACGCCGCAC
CGCACGACTAATCCCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCCCTCCCCCAGGCCACATTGCCCTGGCCCGCGCCCGTTTCCCCG
AAGGAATCTTGGGGGCCAAGCTAGATATTTTGGCACGGCTCCCTCTCTGG
AGCGTCGGTCTTGACTATAGACACGGCACTG GTAAGCAAGCCCTCCTTGG
TTCTCTCCCTTCCCCAACTCTTTCGCTCGGTCAATGCTTTTTTGAATTTC
TTCTCTCTACACACACGCATATATATATATATATAGATATATAGATGTGG
AGAGAGACATGTGTGGGTGCGTGGGTGCGTGGGTGGGTGCGTGTGTTTGT
GCACCTCTTCATATCTTTGTATATACATAAATACACTTTTGTAATACTTT
TCACATATTTATCCTTTCCCTCGTCTTCTTCTTAACAGGCCACGGCGTGG
GCGCCTTCCTCAACGTTCATGAGGGACCCCAATCCATCTCCTACAAGAAA
CGGGCGTACGAAGAAGGGCTAACTCCGGGTACCTTCATTCTCCTTCCCCC
CTCCCTCCCTTCCTTTTTTCCTCCCTCCCTCCTCATCGCGTCCAGCTCCT
CGTGCCCTTCTGAACTAGTGACATCTCTGCCTTCCCTCCTACCCTCTCTC
CTTCCCTTTCTCCTTCCTTCTTTTCTTTCCTCCCCTCCTTCTTCTCTGTA
G back to top Coding sequence (CDS) from alignment at chr21:594229..600269-
>NO21G02030.3 ID=NO21G02030.3|Name=NO21G02030.3|organism=Nannochloropsis oceanica|type=CDS|length=1884bp|location=Sequence derived from alignment at chr21:594229..600269- (Nannochloropsis oceanica) back to top