NO21G01820.1, NO21G01820.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G01820.1
Unique NameNO21G01820.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1989
Alignment locationchr21:537030..539141 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:537030..539141 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO21G01820.1 vs.
Match: EWM22690.1 (inositol-pentakisphosphate 2-kinase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 441.8 bits (1135), Expect = 3.500e-120
Identity = 292/602 (48.50%), Postives = 357/602 (59.30%), Query Frame = 0 
Query:   14 PADFPSSQRPHLEPNDWSYLAEGKLHVLLAYRGNNPRFQNHVLRLLKERHPGEEKAHYDPQHERDYVLRVAGPALGHQYLDAGTFLAVSPSFLTAIAEQILPFRPSRRAIYGLDLHACAVECQRDLTRFF-PLPSLPPSSSSSPHLTLELKPKAGYTSRSRLVPPEHRFKYQESRFQLMQRYRYALHDTRGLEPEWGELVGGPNKDYTPLDLFSGDRGRMTRALQGLLRNPQNFCQFFVDSQVVFGRGKVEVGRATEAARKLLFVEEERRGEQGEDENTTSPNCDKKEEDDEEEQQEQLKEEREKEEEWLDVLMVVVAQILEQEPLLRRLLRLQAMDVLDVEGAGLVMRRLIALCEKGGEGGRGGTEEALALLEMEEFRGFVDCESEEGAEEGGEEKREEGAGLVSAIVQRLEALLVVRHISERDNHDKSVADANEDTKKKEDEDKGKGGSVCPRH--GYEQSLLDEQHAQALAAVKVLTKEECQILLQRWLISLGACDCSIMLSLRR---HHAFPSSHPSCCSSFSLSS----SGHCQTATEPGLDENMKTKVK--AKSSGWIVLGYFMQVVDLGPKSPSKILSKAAMEREIIEVA-RAGA 603
            PA    SQ   L P++W YLAEG LHVLLAYRG   RF++HVLRLLK RH GE+KA YDP+ ER YV  V GP LGHQYL+ GT L V+PSFL  +A QI+P RP+RRA+Y LD  AC VEC RDLTRFF P+P    ++  +  LTLE+KPKAGY SRSRLVPP  RFK+QESRF LMQRYR+A+ +T+ LEPEWG+L  GPN  Y+P DLFSG+  +MTR LQ L+RNPQ F QFFV  ++V+GRG+ +VG A  AAR+LL       G   E                            E EE+ LD LM  VAQ+L+QE LL RLL LQ +DVLDVEGAG VM RL+ LC  GGE        A ALL+ E  +  +      GAEE G      G   +SA+ +RLEA L +     R    K                    GS C     G+   +L++QH +ALA V+ L++ EC  LL RWLI+LGA DCSIML++RR     A P +  S       SS       CQ+A+EPGL     T      +  G + L Y M VVDLGPK P+K+LSKA +E  II  A RAG+
Sbjct:    4 PALSAESQCEDLRPDEWVYLAEGNLHVLLAYRGQCARFRDHVLRLLKVRHGGEKKALYDPRQERHYVEHVVGPVLGHQYLETGTSLTVTPSFLNEVAIQIMPHRPARRAVYDLDKTACTVECLRDLTRFFPPMPHATLTAPPTCQLTLEIKPKAGYHSRSRLVPPARRFKFQESRFSLMQRYRFAVLETQALEPEWGDLREGPNWGYSPPDLFSGEVEKMTRTLQALIRNPQIFFQFFVGPRLVYGRGERQVGLARNAARQLLL----PGGACAEGFGA------------------------ESEEDPLDTLMEAVAQVLQQECLLPRLLSLQRLDVLDVEGAGAVMERLVELC--GGE-----EAAAQALLQEEVLQARL---LRTGAEEEG-----PGGESMSAMARRLEAALGLGPCGARGGSGK--------------------GSTCEGEPAGF---VLEQQHKEALATVQRLSQAECLFLLHRWLIALGASDCSIMLAIRRCPDEAALPLTRFSPVLGQDASSLQPLESFCQSASEPGLLSFRPTPPAQGGRERGAVRLAYAMHVVDLGPKPPTKVLSKARLEDGIIAAAQRAGS 539
The following BLAST results are available for this feature:
BLAST of NO21G01820.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Position :
0
Zoom :
x 1
20040060080010001200140016001800Expect = 3.50e-120 / Id = 48.50SequenceEWM22690.1
Match NameE-valueIdentityDescription
EWM22690.13.500e-12048.50inositol-pentakisphosphate 2-kinase-like protein [... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01820NO21G01820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G01820.1NO21G01820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G01820.1.cds1NO21G01820.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G01820.1.cds2NO21G01820.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G01820.1 ID=NO21G01820.1|Name=NO21G01820.1|organism=Nannochloropsis oceanica|type=mRNA|length=1989bp
TCTCATCTTTCCGTCCACGATACTATATACCTACACATGCATCTCCCATC
CACACGCGCACGTACAGCACGATGATGACGATGACGACGAAAAGTGCGAC
GACAAAAAGCAGGAGACGGTAGCCTGAAAGCCGTTGGCTGCATGGACGAT
ACTACCGCCACAAGGCCGCCATCATCCGCCCCTGCCGACTTCCCCTCTTC
CCAACGGCCACACCTGGAGCCCAACGACTGGAGCTACCTAGCGGAGGGCA
AGCTGCACGTCCTCCTAGCCTACCGCGGCAACAATCCTCGCTTTCAAAAC
CATGTGCTGCGCCTGCTGAAGGAGCGGCACCCGGGAGAAGAAAAGGCGCA
TTATGACCCTCAACACGAGCGAGACTACGTCCTCCGAGTTGCAGGACCAG
CGCTCGGGCACCAATACCTCGACGCTGGCACATTCCTCGCTGTTTCGCCA
TCCTTTTTGACAGCTATAGCAGAGCAGATCTTGCCCTTTCGACCGTCGCG
ACGGGCAATCTACGGCCTGGACTTGCACGCCTGCGCCGTTGAATGCCAGA
GGGACCTCACCCGCTTCTTCCCCCTCCCATCCCTCCCTCCCTCCTCTTCT
TCTTCCCCCCATCTCACCCTCGAACTCAAGCCTAAGGCCGGCTACACCTC
GCGTAGTCGTCTAGTACCCCCAGAACATCGATTTAAATATCAAGAAAGCC
GCTTTCAGCTCATGCAGCGCTACCGGTACGCACTCCACGACACTCGAGGC
CTAGAGCCAGAATGGGGTGAACTGGTGGGAGGCCCCAACAAGGACTATAC
CCCTCTCGATCTATTTTCTGGAGATAGGGGGCGAATGACAAGGGCTTTGC
AAGGGTTGCTGAGGAATCCTCAAAATTTTTGTCAGTTTTTTGTGGATAGC
CAAGTGGTGTTTGGGAGGGGGAAGGTGGAGGTAGGGAGGGCGACAGAGGC
GGCGAGGAAGCTGTTATTTGTTGAGGAGGAGAGAAGGGGGGAGCAGGGTG
AGGATGAGAACACTACATCGCCGAATTGTGATAAAAAGGAAGAAGACGAC
GAGGAGGAGCAGCAGGAGCAGCTGAAGGAAGAGAGAGAGAAAGAAGAGGA
ATGGCTGGATGTACTGATGGTTGTGGTAGCGCAGATCCTAGAGCAAGAGC
CTCTATTGCGGCGCTTGCTTAGATTACAAGCGATGGATGTGCTGGACGTG
GAGGGGGCAGGGTTGGTGATGAGGAGGCTGATTGCTTTATGTGAGAAGGG
GGGCGAGGGAGGGAGGGGGGGGACGGAGGAGGCGTTGGCTTTGTTGGAGA
TGGAGGAGTTTAGAGGGTTTGTCGATTGTGAGAGCGAGGAAGGGGCTGAG
GAGGGGGGCGAAGAAAAGAGGGAGGAAGGAGCGGGGTTGGTGTCCGCGAT
TGTGCAGCGGCTGGAGGCGTTGCTGGTGGTGAGACATATCTCTGAGAGGG
ACAACCACGACAAAAGCGTCGCGGACGCTAATGAAGACACGAAGAAGAAA
GAGGACGAAGACAAGGGAAAAGGGGGATCTGTTTGTCCTCGGCACGGCTA
CGAGCAGTCTCTCTTAGACGAGCAGCACGCCCAGGCCCTGGCCGCCGTTA
AGGTGCTCACCAAAGAGGAGTGTCAGATCCTCCTCCAGCGTTGGCTCATT
TCCTTGGGCGCCTGTGATTGTAGCATTATGCTCTCCCTCCGCAGACATCA
CGCCTTCCCTTCCTCCCACCCTTCCTGCTGCTCCTCATTCTCCCTCTCTT
CTTCTGGCCACTGCCAGACGGCCACAGAGCCGGGGTTAGATGAAAATATG
AAAACGAAAGTCAAAGCCAAATCCAGTGGATGGATCGTCTTGGGCTACTT
CATGCAGGTGGTTGACCTGGGCCCCAAGTCGCCATCTAAAATCCTTTCGA
AGGCCGCCATGGAAAGGGAGATTATTGAGGTGGCTCGAGCGGGGGCGAGG
GGGGGAGGGGGGGCATGGATGAAGGAGCAGCAGCGATGA
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protein sequence of NO21G01820.1

>NO21G01820.1-protein ID=NO21G01820.1-protein|Name=NO21G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=616bp
MDDTTATRPPSSAPADFPSSQRPHLEPNDWSYLAEGKLHVLLAYRGNNPR
FQNHVLRLLKERHPGEEKAHYDPQHERDYVLRVAGPALGHQYLDAGTFLA
VSPSFLTAIAEQILPFRPSRRAIYGLDLHACAVECQRDLTRFFPLPSLPP
SSSSSPHLTLELKPKAGYTSRSRLVPPEHRFKYQESRFQLMQRYRYALHD
TRGLEPEWGELVGGPNKDYTPLDLFSGDRGRMTRALQGLLRNPQNFCQFF
VDSQVVFGRGKVEVGRATEAARKLLFVEEERRGEQGEDENTTSPNCDKKE
EDDEEEQQEQLKEEREKEEEWLDVLMVVVAQILEQEPLLRRLLRLQAMDV
LDVEGAGLVMRRLIALCEKGGEGGRGGTEEALALLEMEEFRGFVDCESEE
GAEEGGEEKREEGAGLVSAIVQRLEALLVVRHISERDNHDKSVADANEDT
KKKEDEDKGKGGSVCPRHGYEQSLLDEQHAQALAAVKVLTKEECQILLQR
WLISLGACDCSIMLSLRRHHAFPSSHPSCCSSFSLSSSGHCQTATEPGLD
ENMKTKVKAKSSGWIVLGYFMQVVDLGPKSPSKILSKAAMEREIIEVARA
GARGGGGAWMKEQQR*
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mRNA from alignment at chr21:537030..539141+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G01820.1 ID=NO21G01820.1|Name=NO21G01820.1|organism=Nannochloropsis oceanica|type=mRNA|length=2112bp|location=Sequence derived from alignment at chr21:537030..539141+ (Nannochloropsis oceanica)
TCTCATCTTTCCGTCCACGATACTATATACCTACACATGCATCTCCCATC
CACACGCGCACGTACAGCACGATGATGACGATGACGACGAAAAGTGCGAC
GACAAAAAGCAGGAGACGGTAGCCTGAAAGCCGTTGGCTGCATGGACGAT
ACTACCGCCACAAGGCCGCCATCATCCGCCCCTGCCGACTTCCCCTCTTC
CCAACGGCCACACCTGGAGCCCAACGACTGGAGCTACCTAGCGGAGGGCA
AGCTGCACGTCCTCCTAGCCTACCGCGGCAACAATCCTCGCTTTCAAAAC
CATGTGCTGCGCCTGCTGAAGGAGCGGCACCCGGGAGAAGAAAAGGCGCA
TTATGACCCTCAACACGAGCGAGACTACGTCCTCCGAGTTGCAGGACCAG
CGCTCGGGCACCAATACCTCGACGCTGGCACATTCCTCGCTGTTTCGCCA
TCCTTTTTGACAGCTATAGCAGAGCAGATCTTGCCCTTTCGACCGTCGCG
ACGGGCAATCTACGGCCTGGACTTGCACGCCTGCGCCGTTGAATGCCAGA
GGGACCTCACCCGCTTCTTCCCCCTCCCATCCCTCCCTCCCTCCTCTTCT
TCTTCCCCCCATCTCACCCTCGAACTCAAGCCTAAGGCCGGCTACACCTC
GCGTAGTCGTCTAGTACCCCCAGAACATCGATTTAAATATCAAGAAAGCC
GCTTTCAGCTCATGCAGCGCTACCGGTACGCACTCCACGACACTCGAGGC
CTAGAGCCAGAATGGGGTGAACTGGTGGGAGGCCCCAACAAGGACTATAC
CCCTCTCGATCTATTTTCTGGAGATAGGGGGCGAATGACAAGGGCTTTGC
AAGGGTTGCTGAGGAATCCTCAAAATTTTTGTCAGTTTTTTGTGGATAGC
CAAGTGGTGTTTGGGAGGGGGAAGGTGGAGGTAGGGAGGGCGACAGAGGC
GGCGAGGAAGCTGTTATTTGTTGAGGAGGAGAGAAGGGGGGAGCAGGGTG
AGGATGAGAACACTACATCGCCGAATTGTGATAAAAAGGAAGAAGACGAC
GAGGAGGAGCAGCAGGAGCAGCTGAAGGAAGAGAGAGAGAAAGAAGAGGA
ATGGCTGGATGTACTGATGGTTGTGGTAGCGCAGATCCTAGAGCAAGAGC
CTCTATTGCGGCGCTTGCTTAGATTACAAGCGATGGATGTGCTGGACGTG
GAGGGGGCAGGGTTGGTGATGAGGAGGCTGATTGCTTTATGTGAGAAGGG
GGGCGAGGGAGGGAGGGGGGGGACGGAGGAGGCGTTGGCTTTGTTGGAGA
TGGAGGAGTTTAGAGGGTTTGTCGATTGTGAGAGCGAGGAAGGGGCTGAG
GAGGGGGGCGAAGAAAAGAGGGAGGAAGGAGCGGGGTTGGTGTCCGCGAT
TGTGCAGCGGCTGGAGGCGTTGCTGGTGGTGAGACATATCTCTGAGAGGG
ACAACCACGACAAAAGCGTCGCGGACGCTAATGAAGACACGAAGAAGAAA
GAGGACGAAGACAAGGGAAAAGGGGGATCTGTTTGTCCTCGGCACGGCTA
CGAGCAGTCTCTCTTAGACGAGCAGCACGCCCAGGCCCTGGCCGCCGTTA
AGGTGCTCACCAAAGAGGAGTGTCAGATCCTCCTCCAGCGTTGGCTCATT
TCCTTGGGCGCCTGTGATTGTAGCATTATGCTCTCCCTCCGCAGACATCA
CGCCTTCCCTTCCTCCCACCCTTCCTGCTGCTCCTCATTCTCCCTCTCTT
CTTCTGGCCACTGCCAGACGGCCACAGAGCCGGGGTATGTCTACTTTCAG
CCCCACGCCCATAGAGAGGAGGGAGATAGGCCAAATGGAACCAGCGCTGC
TCGATATGTAAATATGAAAACAAATACCAATACAACAAATACAACAAATT
CAAATAGGTTAGATGAAAATATGAAAACGAAAGTCAAAGCCAAATCCAGT
GGATGGATCGTCTTGGGCTACTTCATGCAGGTGGTTGACCTGGGCCCCAA
GTCGCCATCTAAAATCCTTTCGAAGGCCGCCATGGAAAGGGAGATTATTG
AGGTGGCTCGAGCGGGGGCGAGGGGGGGAGGGGGGGCATGGATGAAGGAG
CAGCAGCGATGA
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Coding sequence (CDS) from alignment at chr21:537030..539141+

>NO21G01820.1 ID=NO21G01820.1|Name=NO21G01820.1|organism=Nannochloropsis oceanica|type=CDS|length=1848bp|location=Sequence derived from alignment at chr21:537030..539141+ (Nannochloropsis oceanica)
ATGGACGATACTACCGCCACAAGGCCGCCATCATCCGCCCCTGCCGACTT
CCCCTCTTCCCAACGGCCACACCTGGAGCCCAACGACTGGAGCTACCTAG
CGGAGGGCAAGCTGCACGTCCTCCTAGCCTACCGCGGCAACAATCCTCGC
TTTCAAAACCATGTGCTGCGCCTGCTGAAGGAGCGGCACCCGGGAGAAGA
AAAGGCGCATTATGACCCTCAACACGAGCGAGACTACGTCCTCCGAGTTG
CAGGACCAGCGCTCGGGCACCAATACCTCGACGCTGGCACATTCCTCGCT
GTTTCGCCATCCTTTTTGACAGCTATAGCAGAGCAGATCTTGCCCTTTCG
ACCGTCGCGACGGGCAATCTACGGCCTGGACTTGCACGCCTGCGCCGTTG
AATGCCAGAGGGACCTCACCCGCTTCTTCCCCCTCCCATCCCTCCCTCCC
TCCTCTTCTTCTTCCCCCCATCTCACCCTCGAACTCAAGCCTAAGGCCGG
CTACACCTCGCGTAGTCGTCTAGTACCCCCAGAACATCGATTTAAATATC
AAGAAAGCCGCTTTCAGCTCATGCAGCGCTACCGGTACGCACTCCACGAC
ACTCGAGGCCTAGAGCCAGAATGGGGTGAACTGGTGGGAGGCCCCAACAA
GGACTATACCCCTCTCGATCTATTTTCTGGAGATAGGGGGCGAATGACAA
GGGCTTTGCAAGGGTTGCTGAGGAATCCTCAAAATTTTTGTCAGTTTTTT
GTGGATAGCCAAGTGGTGTTTGGGAGGGGGAAGGTGGAGGTAGGGAGGGC
GACAGAGGCGGCGAGGAAGCTGTTATTTGTTGAGGAGGAGAGAAGGGGGG
AGCAGGGTGAGGATGAGAACACTACATCGCCGAATTGTGATAAAAAGGAA
GAAGACGACGAGGAGGAGCAGCAGGAGCAGCTGAAGGAAGAGAGAGAGAA
AGAAGAGGAATGGCTGGATGTACTGATGGTTGTGGTAGCGCAGATCCTAG
AGCAAGAGCCTCTATTGCGGCGCTTGCTTAGATTACAAGCGATGGATGTG
CTGGACGTGGAGGGGGCAGGGTTGGTGATGAGGAGGCTGATTGCTTTATG
TGAGAAGGGGGGCGAGGGAGGGAGGGGGGGGACGGAGGAGGCGTTGGCTT
TGTTGGAGATGGAGGAGTTTAGAGGGTTTGTCGATTGTGAGAGCGAGGAA
GGGGCTGAGGAGGGGGGCGAAGAAAAGAGGGAGGAAGGAGCGGGGTTGGT
GTCCGCGATTGTGCAGCGGCTGGAGGCGTTGCTGGTGGTGAGACATATCT
CTGAGAGGGACAACCACGACAAAAGCGTCGCGGACGCTAATGAAGACACG
AAGAAGAAAGAGGACGAAGACAAGGGAAAAGGGGGATCTGTTTGTCCTCG
GCACGGCTACGAGCAGTCTCTCTTAGACGAGCAGCACGCCCAGGCCCTGG
CCGCCGTTAAGGTGCTCACCAAAGAGGAGTGTCAGATCCTCCTCCAGCGT
TGGCTCATTTCCTTGGGCGCCTGTGATTGTAGCATTATGCTCTCCCTCCG
CAGACATCACGCCTTCCCTTCCTCCCACCCTTCCTGCTGCTCCTCATTCT
CCCTCTCTTCTTCTGGCCACTGCCAGACGGCCACAGAGCCGGGGTTAGAT
GAAAATATGAAAACGAAAGTCAAAGCCAAATCCAGTGGATGGATCGTCTT
GGGCTACTTCATGCAGGTGGTTGACCTGGGCCCCAAGTCGCCATCTAAAA
TCCTTTCGAAGGCCGCCATGGAAAGGGAGATTATTGAGGTGGCTCGAGCG
GGGGCGAGGGGGGGAGGGGGGGCATGGATGAAGGAGCAGCAGCGATGA
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Synonyms
Publications