NO21G01370.1, NO21G01370.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G01370.1
Unique Name	NO21G01370.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3802
Alignment location	chr21:409906..414372 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:409906..414372 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G01370.1 vs.
Match: EWM22631.1 (trehalose-6-phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 1416.4 bits (3665), Expect = 0.000e+0
Identity = 711/851 (83.55%), Postives = 771/851 (90.60%), Query Frame = 0

Query:  216 ILTIWVGTVSASGLSKEDEEEVRALLKPMRCHPIFMEDELIEGHYHGYCKKVMWPLFHNVEMLDSCGAHWNYQKDGKEQRGDDLDVGKIWDCGGKEGWWGMYKKVNEIFRDVVVEVCKLQEGDVLWVHDYHLMLLPSLISEHEMQVHKHRKCSLVFFLHIPFPTSQIFRALYCGEELLTGMLCADVIGFHAFDHARHFLNACKRILGLSYFNKSGGLIGIEMERRTVTVLISHVGIEGSLLRKAMATQRVQEETAALRRKHEGKLLIAGLDISQRLSGIALKLLAFERLLTEYECYRDQVVMVQRSLLTGSRAEDEEATTSEVRELVARVNSKFGPVIDYQELRANQLPTQDRIALWLASDILVIAAIREGLNLHPLEFTYVKQGEDHFPGVVLASEFSACSSMLNGALRINPFDIKRVVVALDHAIRLDLSERLSRRDRDLPYISERPSALWTRQVLQDLWAAKAELPELLKTETGGVRVQYQPVWQATYKHLDNSEVKSAYEKAKRRFIFTDFGGTLMEKEKVDLYIKRSFTQTTGKRPSPSVMESLRILSSDPKNEVFVISGLQLLPLEDVFGQLDRIGLAAGNGLYLSMPQSEGGGEGAKED-ATSPR--PSDSHVKEGGRGGVGGIQQGKGKKRSWSLLDYGVKWAQVKDISLPILERYTARTNGSSVRLRDPGIAWSYYSTDPEWGLMQAKSVILELEEALAAHDVKVVHLKGMVEVVPKRLNKGVVLRYAIQSKQGPSPDFIMCMGDDAGDEYMFTSIYSYLSETAETELTRSHKAHNDAAAAAAAAGRPSAQGVLQRKPSQEAEEEVTKYVFTCSVGKHRSHASFYVHNVEEVRGLLQCLASV 1064
            +LT WVGTVSAS LS+ D++E+RALL+PMRCHPIFM  E+IEGHYHGYCKKVMWPLFHNVEMLDSCGA WNY+ DG+       D   +W  GGKE WWG Y +VN IFRDVVVEVCKL+EGDVLWVHDYHLMLLPSL+S HE +VH+HRKCS++FFLHIPFPTSQIFRALYCGE+LL GML ADVIGFHAFDHARHFLNACKRILGLSYFNKSGGLIGIE+E RTVTVLISHVGIEGSLL KAMAT RVQEETAALR KH+GKLLIAGLDISQRLSGIALKLLAFERLLTEYECYRD+VVMVQRSLLTGSRAEDEEATT+EVRELVARVN+KFGPVIDYQELR+N+LP +DRIALWLASD+LVIAAIREGLNLHPLEFT+VKQGE+H PGVVLASEFSACSS+LNGALRINPFDIKRVVV+LDHAIRL+L ERLSRRDRDLPYISERPS+LWTRQVLQDLWAAKAE PELLK +TGGVRVQYQPVWQ ++ HL  +EV+ AY KA RRFIFTDFGGTLMEKEKVDLYIKRSFTQTTGKRPSPSVMESLR+LS+DPKNEVF+ISGLQLLPLE+VFG LDRIGLAA NGLYLSMPQ     +  KE  +T+PR  P  SH ++      G  QQ KGKKRSWSLLDYGVKWA+VKDI+LPILERYTARTNGSSVRLRDPGIAWSYYSTDPEWGLMQAKSVI ELEEALAAHDVKVVHLKGMVE+VPKRLNKGVVLRYAIQSK+GPSPDFIMCMGDDA DEYMFTS+YSYLSETAETEL RSHKA+ DAAAAAAA G    QG+ QR+PSQ+AEEE+TKYVFTCSVGKHRSHASFYVHNVEEVR LL+ LA++
Sbjct:    1 MLTFWVGTVSASDLSEADKQEIRALLEPMRCHPIFMPREMIEGHYHGYCKKVMWPLFHNVEMLDSCGADWNYKADGRAW-----DPASVWAVGGKEHWWGTYCQVNRIFRDVVVEVCKLEEGDVLWVHDYHLMLLPSLVSAHEERVHRHRKCSIIFFLHIPFPTSQIFRALYCGEDLLKGMLSADVIGFHAFDHARHFLNACKRILGLSYFNKSGGLIGIELETRTVTVLISHVGIEGSLLTKAMATARVQEETAALRHKHKGKLLIAGLDISQRLSGIALKLLAFERLLTEYECYRDRVVMVQRSLLTGSRAEDEEATTAEVRELVARVNAKFGPVIDYQELRSNRLPREDRIALWLASDVLVIAAIREGLNLHPLEFTFVKQGEEHPPGVVLASEFSACSSLLNGALRINPFDIKRVVVSLDHAIRLELQERLSRRDRDLPYISERPSSLWTRQVLQDLWAAKAETPELLKRDTGGVRVQYQPVWQTSHNHLRETEVEGAYSKATRRFIFTDFGGTLMEKEKVDLYIKRSFTQTTGKRPSPSVMESLRLLSADPKNEVFIISGLQLLPLEEVFGHLDRIGLAAANGLYLSMPQES---DADKESLSTTPRSVPPGSHPEDAS----GLPQQHKGKKRSWSLLDYGVKWAEVKDIALPILERYTARTNGSSVRLRDPGIAWSYYSTDPEWGLMQAKSVIAELEEALAAHDVKVVHLKGMVEIVPKRLNKGVVLRYAIQSKEGPSPDFIMCMGDDASDEYMFTSLYSYLSETAETELARSHKAY-DAAAAAAADGSEPVQGLSQRRPSQQAEEEITKYVFTCSVGKHRSHASFYVHNVEEVRKLLEGLAAL 838

The following BLAST results are available for this feature:

BLAST of NO21G01370.1 vs.

BLAST of NO21G01370.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22631.1	0.000e+0	83.55	trehalose-6-phosphate synthase [Nannochloropsis ga...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G01370	NO21G01370	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G01370.1	NO21G01370.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G01370.1.cds1	NO21G01370.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G01370.1.cds2	NO21G01370.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G01370.1.cds3	NO21G01370.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G01370.1.cds4	NO21G01370.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:409906..414372+
coding sequence from alignment at chr21:409906..414372+

mRNA sequence

>NO21G01370.1 ID=NO21G01370.1|Name=NO21G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3802bp
ACAGTCACAGCCCGCACAAAAAGCCTTGCGGGGGCGCATTTAGCTGGGCC
GGTGTCTGCGTTCGGAGCGGGGGACACGGGAATTTCGCTAGGGCACAAGG
CAAAGTGCGACCCAACTCCAACTTCTCTGTGGCAACTCTCACGTTCACGC
TGCCAGCATGTCTTCGCAGTACAGTATCGTCCACCTCAGAGTCAAGGCTG
AGACCGAGTTTGGGCAAGTGGTGCACGTGTCGGGGAGTTCGTTTACCATG
GGCAACTTTAGCACGGCCGAGGCCGTCCCCCTTGTGACCAGCCCTGAAGA
TTACCCCATCTGGCGCACCAGCAAACCACTCGTTGTTCCGCGTGGGATCC
CGCAGGCTTACAAATACGCGATTTTCGAAGGCGGGCATTTCAAGCGGTGG
GAGGCTCTGGACATCCCTCGTGTCGTTTGCATCGAAGAATTTCACGCGGA
GCTCAATGATGTCTTAGACGAAGCACAAGTCGATGAGGAGGAGGGAGAGG
GAGAGGGCAAGGATGAGCTGACACCTCTGGCGGGGCCAGGGCATCAGGCA
ACGAGGGAGGTGATAAATAGGATTAGGCGGACGTTGAGTCAGACGGTGGA
ATTGAATGAGGATTCTGTGAATATAGATGCGCAAAACCTGCTGGAGAGTA
GCACGAAGGAATACAAACCACCGCCGGGGTCGCATTTATACCTTGTATGT
TTTCATTTGCCGGTGACGTTGGCGAAAAATGAGAGGGGGGAGTGGACGGC
GCAGTGGAATGAGAGCTTGATTGCCAAGACGGATAACAGCATAAGTAGTG
ATATATTGACAATTTGGGTGGGCACTGTCAGTGCGTCGGGCTTAAGCAAG
GAGGATGAAGAAGAGGTACGGGCGCTTTTGAAGCCGATGCGGTGCCATCC
TATATTCATGGAGGACGAGTTGATTGAGGGGCATTACCACGGGTACTGCA
AGAAGGTCATGTGGCCTCTCTTTCACAACGTGGAGATGCTGGACTCGTGT
GGAGCGCATTGGAATTACCAGAAGGATGGGAAGGAACAAAGGGGGGATGA
TTTGGATGTAGGGAAGATTTGGGATTGCGGGGGGAAAGAGGGGTGGTGGG
GGATGTACAAGAAGGTGAACGAGATTTTCAGGGACGTGGTGGTGGAGGTG
TGCAAGCTGCAGGAGGGCGATGTCCTCTGGGTCCATGACTACCATCTGAT
GCTCTTGCCGAGCCTAATTTCTGAGCATGAGATGCAGGTGCATAAACATA
GGAAGTGTTCGCTGGTCTTTTTCTTGCACATCCCTTTTCCGACGTCGCAG
ATTTTTCGGGCTTTGTATTGCGGGGAGGAGCTGCTGACAGGGATGCTTTG
TGCGGATGTGATTGGCTTCCATGCCTTCGATCATGCCAGACATTTCCTGA
ATGCGTGTAAGCGGATTCTGGGTTTGTCGTATTTCAACAAATCGGGGGGA
TTGATAGGCATTGAGATGGAGAGGCGGACGGTGACGGTGTTAATTTCGCA
TGTGGGGATCGAGGGGTCGCTGTTGAGGAAGGCCATGGCCACGCAGAGGG
TTCAGGAGGAGACGGCGGCGCTGAGAAGGAAGCACGAGGGAAAGTTGTTG
ATTGCGGGGTTGGACATTTCCCAGCGGCTGTCGGGGATTGCCCTAAAGCT
GTTGGCGTTTGAACGGTTGTTGACGGAGTATGAATGCTATCGAGACCAGG
TGGTGATGGTGCAGCGCTCCCTCTTGACAGGATCGAGAGCCGAGGACGAA
GAAGCGACGACAAGCGAGGTCCGCGAGCTAGTGGCAAGAGTGAATTCGAA
GTTTGGTCCGGTCATAGACTATCAAGAACTGAGGGCCAACCAGTTGCCCA
CCCAAGATCGCATCGCCCTCTGGTTGGCATCCGATATCCTGGTGATTGCA
GCGATAAGGGAGGGCCTGAATTTGCACCCGCTTGAATTCACGTACGTGAA
ACAAGGTGAAGACCATTTTCCAGGTGTCGTCCTTGCGTCGGAATTCTCTG
CCTGCTCCTCCATGCTCAACGGTGCCCTCCGCATCAATCCTTTCGATATC
AAGCGCGTCGTCGTTGCCCTCGACCATGCCATCCGCCTTGACCTCAGCGA
ACGACTCTCTCGTCGTGACCGCGATCTCCCCTACATCTCCGAGCGTCCCT
CCGCCCTGTGGACTCGCCAGGTGCTCCAAGATCTATGGGCAGCCAAGGCC
GAGCTGCCCGAACTGCTCAAGACGGAGACGGGCGGGGTGAGAGTGCAGTA
CCAGCCGGTTTGGCAGGCTACCTACAAACACCTCGACAATTCAGAGGTGA
AGAGCGCGTATGAGAAGGCGAAGCGTCGGTTTATTTTCACCGATTTCGGA
GGTACCTTGATGGAGAAGGAAAAGGTCGATTTGTACATTAAGAGGAGTTT
TACCCAGACGACGGGAAAAAGGCCGAGTCCGTCGGTGATGGAATCGCTGA
GAATTTTGTCGTCGGACCCCAAGAATGAGGTGTTTGTCATTTCGGGGTTG
CAGCTTTTGCCGTTGGAGGACGTGTTTGGTCAGCTGGATAGGATTGGCTT
GGCAGCAGGGAATGGGCTTTATTTATCGATGCCGCAGTCGGAAGGGGGGG
GCGAAGGGGCAAAGGAGGATGCTACGTCGCCGCGCCCGTCGGATAGTCAC
GTGAAGGAGGGAGGTCGGGGAGGCGTGGGGGGGATACAGCAGGGGAAGGG
GAAAAAGAGGAGTTGGAGTTTGCTAGATTATGGAGTGAAGTGGGCGCAGG
TTAAGGACATTTCACTCCCCATCCTGGAGCGATACACGGCGCGGACGAAC
GGGAGTAGTGTCCGACTGCGTGATCCTGGCATTGCTTGGTCCTACTATTC
GACAGACCCTGAATGGGGGCTGATGCAAGCGAAATCTGTCATTTTAGAGC
TTGAGGAGGCTCTGGCTGCCCATGATGTCAAGGTCGTGCACCTCAAGGGG
ATGGTGGAAGTCGTCCCCAAGCGCTTGAACAAAGGCGTGGTGCTGCGCTA
TGCCATTCAGAGCAAGCAAGGTCCTTCGCCTGATTTCATCATGTGTATGG
GGGACGACGCGGGCGATGAATACATGTTCACATCCATCTACTCCTACCTC
TCCGAGACCGCCGAGACGGAACTCACCCGCTCCCATAAAGCCCACAATGA
CGCCGCTGCAGCTGCTGCTGCTGCAGGGCGGCCGTCGGCTCAAGGGGTAT
TGCAGCGGAAGCCATCGCAGGAGGCGGAAGAGGAGGTGACGAAGTATGTG
TTTACCTGCTCGGTGGGGAAGCATCGGTCGCATGCCTCATTTTATGTGCA
CAACGTGGAGGAGGTGCGGGGATTGCTGCAGTGTTTGGCGTCGGTGTAAG
GCCCTCCCGTCCTTGTGCTCCGCCACGTTGGGCGTAAAGGAAAGAGAGGG
GGGCTGACGAAGGGTGCGGGAGAGAGGGGGAAAGATGGTTTTAAGCTGCT
CGGCGGAAAAAAAGGGGAATCGAGGAAGGGAAGAAAATGATACGTCGACG
CATTGACGCAAAACAGGAAAAGAGGAGTGAAGGGGGAAAAAAAGTGAGTG
AGTAAGCGTAAATGGGCTTTACTGACAAAAAAGGAGACCAAAACGAAGAG
GAAAAAGAAGAAGACGAAGAAGTAGGTCACGACAACAGATGATGATATTG
CACTCCTCGGACTTTCTCTTTTTTGCCCGAGAGAATTCGACTAGCAAGCC
TGCGGACATGGAAGAGAAAATCCAGAAAAGAGAACGAAAGAAGAAGGGAG
GTTGAAGCTGAAAAGATGCAAAAAAGACAGAAAACAAATCTTTGACATGA
CT

protein sequence of NO21G01370.1

>NO21G01370.1-protein ID=NO21G01370.1-protein|Name=NO21G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1064bp
MSSQYSIVHLRVKAETEFGQVVHVSGSSFTMGNFSTAEAVPLVTSPEDYP
IWRTSKPLVVPRGIPQAYKYAIFEGGHFKRWEALDIPRVVCIEEFHAELN
DVLDEAQVDEEEGEGEGKDELTPLAGPGHQATREVINRIRRTLSQTVELN
EDSVNIDAQNLLESSTKEYKPPPGSHLYLVCFHLPVTLAKNERGEWTAQW
NESLIAKTDNSISSDILTIWVGTVSASGLSKEDEEEVRALLKPMRCHPIF
MEDELIEGHYHGYCKKVMWPLFHNVEMLDSCGAHWNYQKDGKEQRGDDLD
VGKIWDCGGKEGWWGMYKKVNEIFRDVVVEVCKLQEGDVLWVHDYHLMLL
PSLISEHEMQVHKHRKCSLVFFLHIPFPTSQIFRALYCGEELLTGMLCAD
VIGFHAFDHARHFLNACKRILGLSYFNKSGGLIGIEMERRTVTVLISHVG
IEGSLLRKAMATQRVQEETAALRRKHEGKLLIAGLDISQRLSGIALKLLA
FERLLTEYECYRDQVVMVQRSLLTGSRAEDEEATTSEVRELVARVNSKFG
PVIDYQELRANQLPTQDRIALWLASDILVIAAIREGLNLHPLEFTYVKQG
EDHFPGVVLASEFSACSSMLNGALRINPFDIKRVVVALDHAIRLDLSERL
SRRDRDLPYISERPSALWTRQVLQDLWAAKAELPELLKTETGGVRVQYQP
VWQATYKHLDNSEVKSAYEKAKRRFIFTDFGGTLMEKEKVDLYIKRSFTQ
TTGKRPSPSVMESLRILSSDPKNEVFVISGLQLLPLEDVFGQLDRIGLAA
GNGLYLSMPQSEGGGEGAKEDATSPRPSDSHVKEGGRGGVGGIQQGKGKK
RSWSLLDYGVKWAQVKDISLPILERYTARTNGSSVRLRDPGIAWSYYSTD
PEWGLMQAKSVILELEEALAAHDVKVVHLKGMVEVVPKRLNKGVVLRYAI
QSKQGPSPDFIMCMGDDAGDEYMFTSIYSYLSETAETELTRSHKAHNDAA
AAAAAAGRPSAQGVLQRKPSQEAEEEVTKYVFTCSVGKHRSHASFYVHNV
EEVRGLLQCLASV*

mRNA from alignment at chr21:409906..414372+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G01370.1 ID=NO21G01370.1|Name=NO21G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=4467bp|location=Sequence derived from alignment at chr21:409906..414372+ (Nannochloropsis oceanica)
ACAGTCACAGCCCGCACAAAAAGCCTTGCGGGGGCGCATTTAGCTGGGCC
GGTGTCTGCGTTCGGAGCGGGGGACACGGGAATTTCGCTAGGGCACAAGG
CAAAGTGCGACCCAACTCCAACTTCTCTGTGGCAACTCTCACGTTCACGC
TGCCAGCATGTCTTCGCAGTACAGTATCGTCCACCTCAGAGTCAAGGCTG
AGACCGAGTTTGGGCAAGTGGTGCACGTGTCGGGGAGTTCGTTTACCATG
GGCAACTTTAGCACGGCCGAGGTAAGATCACCGCTGCAGCAGGGAGGGCA
ACATAGAAGGATTCTTGATGTTGGGTTGGCTGGGCTTGCGTGCTCCAGGC
AAAGTCCTTGGGAACGGGCTCTAGATACGTAAATTGTACTGAACAAAAGA
TAAGACTGGTTGGGGATGCCTGGTCTGCGTAGCACTCTTTTTGGCCGCCA
GCAGGAGCAGCACATACTCACCCCCCTCTCTCACTCCCTCCCTCAAACTC
CCCTCCGTAGGCCGTCCCCCTTGTGACCAGCCCTGAAGATTACCCCATCT
GGCGCACCAGCAAACCACTCGTTGTTCCGCGTGGGATCCCGCAGGCTTAC
AAATACGCGATTTTCGAAGGCGGGCATTTCAAGCGGTGGGAGGCTCTGGA
CATCCCTCGTGTCGTTTGCATCGAAGAATTTCACGCGGAGCTCAATGATG
TCTTAGACGAAGCACAAGTCGATGAGGAGGAGGGAGAGGGAGAGGGCAAG
GATGAGCTGACACCTCTGGCGGGGCCAGGGCATCAGGCAACGAGGGAGGT
GATAAATAGGATTAGGCGGACGTTGAGTCAGACGGTGGAATTGAATGAGG
ATTCTGTGAATATAGATGCGCAAAACCTGCTGGAGAGTAGCACGAAGGAA
TACAAACCACCGCCGGGGTCGCATTTATACCTTGTATGTTTTCATTTGCC
GGTGACGTTGGCGAAAAATGAGAGGGGGGAGTGGACGGCGCAGTGGAATG
AGAGCTTGATTGCCAAGACGGATAACAGCATAAGTAGTGATATATTGACA
ATTTGGGTGGGCACTGTCAGTGCGTCGGGCTTAAGCAAGGAGGATGAAGA
AGAGGTACGGGCGCTTTTGAAGCCGATGCGGTGCCATCCTATATTCATGG
AGGACGAGTTGATTGAGGGGCATTACCACGGGTACTGCAAGAAGGTCATG
TGGCCTCTCTTTCACAACGTGGAGATGCTGGACTCGTGTGGAGCGCATTG
GAATTACCAGAAGGATGGGAAGGAACAAAGGGGGGATGATTTGGATGTAG
GGAAGATTTGGGATTGCGGGGGGAAAGAGGGGTGGTGGGGGATGTACAAG
AAGGTGAACGAGATTTTCAGGGACGTGGTGGTGGAGGTGTGCAAGCTGCA
GGAGGGCGATGTCCTCTGGGTCCATGACTACCATCTGATGCTCTTGCCGA
GCCTAATTTCTGAGCATGAGATGCAGGTGCATAAACATAGGAAGTGTTCG
CTGGTCTTTTTCTTGCACATCCCTTTTCCGACGTCGCAGATTTTTCGGGC
TTTGTATTGCGGGGAGGAGCTGCTGACAGGGATGCTTTGTGCGGATGTGA
TTGGCTTCCATGCCTTCGATCATGCCAGACATTTCCTGAATGCGTGTAAG
CGGATTCTGGGTTTGTCGTATTTCAACAAATCGGGGGGATTGATAGGCAT
TGAGATGGAGAGGCGGACGGTGACGGTGTTAATTTCGCATGTGGGGATCG
AGGGGTCGCTGTTGAGGAAGGCCATGGCCACGCAGAGGGTTCAGGAGGAG
ACGGCGGCGCTGAGAAGGAAGCACGAGGGAAAGTTGTTGATTGCGGGGTT
GGACATTTCCCAGCGGCTGTCGGGGATTGCCCTAAAGCTGTTGGCGTTTG
AACGGTTGTTGACGGAGTATGAATGCTATCGAGACCAGGTGGTGATGGTG
CAGCGCTCCCTCTTGACAGGATCGAGAGCCGAGGACGAAGAAGCGACGAC
AAGCGAGGTCCGCGAGCTAGTGGCAAGAGTGAATTCGAAGTTTGGTCCGG
TCATAGACTATCAAGAACTGAGGGCCAACCAGTTGCCCACCCAAGATCGC
ATCGCCCTCTGGTTGGCATCCGATATCCTGGTGATTGCAGCGATAAGGGA
GGGCCTGAATTTGCACCCGCTTGAATTCACGTACGTGAAACAAGGTAAGA
ATCTTGAGAGGGAGGAATCGAGAAAGGGGGGGAAGAGACAAACCGAAGTG
TCGTCCTAGAGTCCTTTCACTCTCCGTCTGCTGTACTATCATTCCCAACG
GTGCTTCCCGGAACACCCCTTCGAGATCTCAACCACCCATCCATCCATCT
TCTCCTTCCTACCCCTCTCCTTCCCTTCCCTTGCCCTTCCAATTTTAGGT
GAAGACCATTTTCCAGGTGTCGTCCTTGCGTCGGAATTCTCTGCCTGCTC
CTCCATGCTCAACGGTGCCCTCCGCATCAATCCTTTCGATATCAAGCGCG
TCGTCGTTGCCCTCGACCATGCCATCCGCCTTGACCTCAGCGAACGACTC
TCTCGTCGTGACCGCGATCTCCCCTACATCTCCGAGCGTCCCTCCGCCCT
GTGGACTCGCCAGGTGCTCCAAGATCTATGGGCAGCCAAGGCCGAGCTGC
CCGAACTGCTCAAGACGGAGACGGGCGGGGTGAGAGTGCAGTACCAGCCG
GTTTGGCAGGCTACCTACAAACACCTCGACAATTCAGAGGTGAAGAGCGC
GTATGAGAAGGCGAAGCGTCGGTTTATTTTCACCGATTTCGGAGGTACCT
TGATGGAGAAGGAAAAGGTCGATTTGTACATTAAGAGGAGTTTTACCCAG
ACGACGGGAAAAAGGCCGAGTCCGTCGGTGATGGAATCGCTGAGAATTTT
GTCGTCGGACCCCAAGAATGAGGTGTTTGTCATTTCGGGGTTGCAGCTTT
TGCCGTTGGAGGACGTGTTTGGTCAGCTGGATAGGATTGGCTTGGCAGCA
GGGAATGGGCTTTATTTATCGATGCCGCAGTCGGAAGGGGGGGGCGAAGG
GGCAAAGGAGGATGCTACGTCGCCGCGCCCGTCGGATAGTCACGTGAAGG
AGGGAGGTCGGGGAGGCGTGGGGGGGATACAGCAGGGGAAGGGGAAAAAG
AGGAGTTGGAGTTTGCTAGATTATGGAGTGAAGTGGGCGCAGGTGAGCTT
ACTTTATTCCCTCCGTTCCTTCCTCGCTACCTCCCCTTCTCCCTTTCTCC
CCTCCTCTTTATATTGGTCAATAAAATACTTAGCATTAGTTGATTTGGAA
ACTGCAATTCGCTTCGAAATACGCGCACACGTTTTCACAACTTCTCCTCT
CACAACTTCTTCCTCCCTCCCTCGCTCTCTTTCCCACCCCCTCTCTCCCT
CGTTCGATGAACAGGTTAAGGACATTTCACTCCCCATCCTGGAGCGATAC
ACGGCGCGGACGAACGGGAGTAGTGTCCGACTGCGTGATCCTGGCATTGC
TTGGTCCTACTATTCGACAGACCCTGAATGGGGGCTGATGCAAGCGAAAT
CTGTCATTTTAGAGCTTGAGGAGGCTCTGGCTGCCCATGATGTCAAGGTC
GTGCACCTCAAGGGGATGGTGGAAGTCGTCCCCAAGCGCTTGAACAAAGG
CGTGGTGCTGCGCTATGCCATTCAGAGCAAGCAAGGTCCTTCGCCTGATT
TCATCATGTGTATGGGGGACGACGCGGGCGATGAATACATGTTCACATCC
ATCTACTCCTACCTCTCCGAGACCGCCGAGACGGAACTCACCCGCTCCCA
TAAAGCCCACAATGACGCCGCTGCAGCTGCTGCTGCTGCAGGGCGGCCGT
CGGCTCAAGGGGTATTGCAGCGGAAGCCATCGCAGGAGGCGGAAGAGGAG
GTGACGAAGTATGTGTTTACCTGCTCGGTGGGGAAGCATCGGTCGCATGC
CTCATTTTATGTGCACAACGTGGAGGAGGTGCGGGGATTGCTGCAGTGTT
TGGCGTCGGTGTAAGGCCCTCCCGTCCTTGTGCTCCGCCACGTTGGGCGT
AAAGGAAAGAGAGGGGGGCTGACGAAGGGTGCGGGAGAGAGGGGGAAAGA
TGGTTTTAAGCTGCTCGGCGGAAAAAAAGGGGAATCGAGGAAGGGAAGAA
AATGATACGTCGACGCATTGACGCAAAACAGGAAAAGAGGAGTGAAGGGG
GAAAAAAAGTGAGTGAGTAAGCGTAAATGGGCTTTACTGACAAAAAAGGA
GACCAAAACGAAGAGGAAAAAGAAGAAGACGAAGAAGTAGGTCACGACAA
CAGATGATGATATTGCACTCCTCGGACTTTCTCTTTTTTGCCCGAGAGAA
TTCGACTAGCAAGCCTGCGGACATGGAAGAGAAAATCCAGAAAAGAGAAC
GAAAGAAGAAGGGAGGTTGAAGCTGAAAAGATGCAAAAAAGACAGAAAAC
AAATCTTTGACATGACT

Coding sequence (CDS) from alignment at chr21:409906..414372+

>NO21G01370.1 ID=NO21G01370.1|Name=NO21G01370.1|organism=Nannochloropsis oceanica|type=CDS|length=3192bp|location=Sequence derived from alignment at chr21:409906..414372+ (Nannochloropsis oceanica)
ATGTCTTCGCAGTACAGTATCGTCCACCTCAGAGTCAAGGCTGAGACCGA
GTTTGGGCAAGTGGTGCACGTGTCGGGGAGTTCGTTTACCATGGGCAACT
TTAGCACGGCCGAGGCCGTCCCCCTTGTGACCAGCCCTGAAGATTACCCC
ATCTGGCGCACCAGCAAACCACTCGTTGTTCCGCGTGGGATCCCGCAGGC
TTACAAATACGCGATTTTCGAAGGCGGGCATTTCAAGCGGTGGGAGGCTC
TGGACATCCCTCGTGTCGTTTGCATCGAAGAATTTCACGCGGAGCTCAAT
GATGTCTTAGACGAAGCACAAGTCGATGAGGAGGAGGGAGAGGGAGAGGG
CAAGGATGAGCTGACACCTCTGGCGGGGCCAGGGCATCAGGCAACGAGGG
AGGTGATAAATAGGATTAGGCGGACGTTGAGTCAGACGGTGGAATTGAAT
GAGGATTCTGTGAATATAGATGCGCAAAACCTGCTGGAGAGTAGCACGAA
GGAATACAAACCACCGCCGGGGTCGCATTTATACCTTGTATGTTTTCATT
TGCCGGTGACGTTGGCGAAAAATGAGAGGGGGGAGTGGACGGCGCAGTGG
AATGAGAGCTTGATTGCCAAGACGGATAACAGCATAAGTAGTGATATATT
GACAATTTGGGTGGGCACTGTCAGTGCGTCGGGCTTAAGCAAGGAGGATG
AAGAAGAGGTACGGGCGCTTTTGAAGCCGATGCGGTGCCATCCTATATTC
ATGGAGGACGAGTTGATTGAGGGGCATTACCACGGGTACTGCAAGAAGGT
CATGTGGCCTCTCTTTCACAACGTGGAGATGCTGGACTCGTGTGGAGCGC
ATTGGAATTACCAGAAGGATGGGAAGGAACAAAGGGGGGATGATTTGGAT
GTAGGGAAGATTTGGGATTGCGGGGGGAAAGAGGGGTGGTGGGGGATGTA
CAAGAAGGTGAACGAGATTTTCAGGGACGTGGTGGTGGAGGTGTGCAAGC
TGCAGGAGGGCGATGTCCTCTGGGTCCATGACTACCATCTGATGCTCTTG
CCGAGCCTAATTTCTGAGCATGAGATGCAGGTGCATAAACATAGGAAGTG
TTCGCTGGTCTTTTTCTTGCACATCCCTTTTCCGACGTCGCAGATTTTTC
GGGCTTTGTATTGCGGGGAGGAGCTGCTGACAGGGATGCTTTGTGCGGAT
GTGATTGGCTTCCATGCCTTCGATCATGCCAGACATTTCCTGAATGCGTG
TAAGCGGATTCTGGGTTTGTCGTATTTCAACAAATCGGGGGGATTGATAG
GCATTGAGATGGAGAGGCGGACGGTGACGGTGTTAATTTCGCATGTGGGG
ATCGAGGGGTCGCTGTTGAGGAAGGCCATGGCCACGCAGAGGGTTCAGGA
GGAGACGGCGGCGCTGAGAAGGAAGCACGAGGGAAAGTTGTTGATTGCGG
GGTTGGACATTTCCCAGCGGCTGTCGGGGATTGCCCTAAAGCTGTTGGCG
TTTGAACGGTTGTTGACGGAGTATGAATGCTATCGAGACCAGGTGGTGAT
GGTGCAGCGCTCCCTCTTGACAGGATCGAGAGCCGAGGACGAAGAAGCGA
CGACAAGCGAGGTCCGCGAGCTAGTGGCAAGAGTGAATTCGAAGTTTGGT
CCGGTCATAGACTATCAAGAACTGAGGGCCAACCAGTTGCCCACCCAAGA
TCGCATCGCCCTCTGGTTGGCATCCGATATCCTGGTGATTGCAGCGATAA
GGGAGGGCCTGAATTTGCACCCGCTTGAATTCACGTACGTGAAACAAGGT
GAAGACCATTTTCCAGGTGTCGTCCTTGCGTCGGAATTCTCTGCCTGCTC
CTCCATGCTCAACGGTGCCCTCCGCATCAATCCTTTCGATATCAAGCGCG
TCGTCGTTGCCCTCGACCATGCCATCCGCCTTGACCTCAGCGAACGACTC
TCTCGTCGTGACCGCGATCTCCCCTACATCTCCGAGCGTCCCTCCGCCCT
GTGGACTCGCCAGGTGCTCCAAGATCTATGGGCAGCCAAGGCCGAGCTGC
CCGAACTGCTCAAGACGGAGACGGGCGGGGTGAGAGTGCAGTACCAGCCG
GTTTGGCAGGCTACCTACAAACACCTCGACAATTCAGAGGTGAAGAGCGC
GTATGAGAAGGCGAAGCGTCGGTTTATTTTCACCGATTTCGGAGGTACCT
TGATGGAGAAGGAAAAGGTCGATTTGTACATTAAGAGGAGTTTTACCCAG
ACGACGGGAAAAAGGCCGAGTCCGTCGGTGATGGAATCGCTGAGAATTTT
GTCGTCGGACCCCAAGAATGAGGTGTTTGTCATTTCGGGGTTGCAGCTTT
TGCCGTTGGAGGACGTGTTTGGTCAGCTGGATAGGATTGGCTTGGCAGCA
GGGAATGGGCTTTATTTATCGATGCCGCAGTCGGAAGGGGGGGGCGAAGG
GGCAAAGGAGGATGCTACGTCGCCGCGCCCGTCGGATAGTCACGTGAAGG
AGGGAGGTCGGGGAGGCGTGGGGGGGATACAGCAGGGGAAGGGGAAAAAG
AGGAGTTGGAGTTTGCTAGATTATGGAGTGAAGTGGGCGCAGGTTAAGGA
CATTTCACTCCCCATCCTGGAGCGATACACGGCGCGGACGAACGGGAGTA
GTGTCCGACTGCGTGATCCTGGCATTGCTTGGTCCTACTATTCGACAGAC
CCTGAATGGGGGCTGATGCAAGCGAAATCTGTCATTTTAGAGCTTGAGGA
GGCTCTGGCTGCCCATGATGTCAAGGTCGTGCACCTCAAGGGGATGGTGG
AAGTCGTCCCCAAGCGCTTGAACAAAGGCGTGGTGCTGCGCTATGCCATT
CAGAGCAAGCAAGGTCCTTCGCCTGATTTCATCATGTGTATGGGGGACGA
CGCGGGCGATGAATACATGTTCACATCCATCTACTCCTACCTCTCCGAGA
CCGCCGAGACGGAACTCACCCGCTCCCATAAAGCCCACAATGACGCCGCT
GCAGCTGCTGCTGCTGCAGGGCGGCCGTCGGCTCAAGGGGTATTGCAGCG
GAAGCCATCGCAGGAGGCGGAAGAGGAGGTGACGAAGTATGTGTTTACCT
GCTCGGTGGGGAAGCATCGGTCGCATGCCTCATTTTATGTGCACAACGTG
GAGGAGGTGCGGGGATTGCTGCAGTGTTTGGCGTCGGTGTAA

Synonyms

Publications