Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr21 genome chr21:396316..398881 -
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G01320.1 vs.
Match: EWM22658.1 (fizzy-related protein [Nannochloropsis gaditana])
HSP 1 Score: 809.7 bits (2090), Expect = 7.400e-231
Identity = 463/732 (63.25%), Postives = 535/732 (73.09%), Query Frame = 0
Query: 5 AERIASSESGDNMNIDNSDSLPSPRTPNRPTSKGNP-FLSPSSSFMGDSSSFSMLCGSPSSSFLTRQWSNGTPPGSPSTSKLHYEYQSRIKSPVKRRMSLEQQMANDASSPKRTHSPLALSRSLSDGLVYGDRFIPARNAPQMEIAYSLMNEEIDNAGSNHASSPFRGPAGVISTRPSTDSFSASPSVSVAASSSVLASSSSSLSLFPDLPLTGGASATGSTATAATTSPPDSRSTSPSALSGAGDVGPERQPILNMLLRSELLGVDLHHPYSRPSSSAFSGGKHHLNDDRAGGGGLPSGAADGRGSDSSSSSINGIDG---------TGSSSSIGRPAG---GEGGPGSLQRSSSSSSSSSPNLLQFKPARECHSEEVHRSFSLLPMGPAQRRLLSTPFKAKRKVSKVPFKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSSVTKLCDLGEDDSVTSVAWTQRGTHLAVGTNTGEVQMWDVGRCQRIRSLSGHSARIGTMSWNGQVLASGSRDRLIYLRDVRAREPRVKKLQGHRQEVCGLRWSFDDCQLASGGNDNKLYIWTLHSSQPVQKFTEHTAAVKALAWSPHQGGLLASGGGTADRHIRFWNTLTGASLSRVDTGSQVCNLMWSKNVNEIVSTHGYSLNQIILWRYPSMTKVTTLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPGAKSRGGEGSRLGTNFLFPVGHDIR 724
A+ IAS+E GD +D S PRTPNRP K +LSPSSSF S++S GSPSSS L +QWS TPP SPS KL EYQSRI SP KRR LE++M+ +ASS K ++SPL+L RSLSDGL GDRFIP R QMEIAYS+M E++ A S ASSPFRGP ST S+ SFSA P SVA SSS L SS+S + GAS +T ++ + S +SP+A + D +R+PILN++LRSELLG+D P PS+ + +++D G G + + D + +S SIGR AG G GG SS S SP LLQFKPARE ++ H SFSLLPM RRLLS+P KAKRKVSK PFKVLDAPALQDDFYLNLVDWSS+NVLAVGLGTCVYLWSACTS+VTKLCDLG +D+V+SVAW +G+HLAVGT+TGEVQ+WDV RCQ++RSL GHSAR+GTMSWNGQ+LA+GSRDRLI +RD+RAREPR+KKL GHRQEVCGLRWSFD+C LASGGNDNKLY+W HSSQP+QKF HTAAVKALAWSPHQ GLLASGGGTADRHIRFWNTLTG ++S VDTGSQVCNLMWS+NVNEIVSTHGYSLNQIILW+YPSM KV TLTGHTFRVLYLA+SPDGQTIVTGAGDETLRFWN FPGAK+ G+ LGT+ LFPVGHDIR
Sbjct: 4 AKAIASTEVGDTGVMDVEGS---PRTPNRPRRKNKSMYLSPSSSF---GSNYSSSEGSPSSS-LVKQWSK-TPPTSPS--KLRSEYQSRINSPSKRRTYLERRMSIEASSFKSSNSPLSLRRSLSDGLTNGDRFIPLRVGAQMEIAYSMMGEDV--AASPQASSPFRGPERAHSTLHSSSSFSALPRTSVATSSSHLFSSTSFSYETTIAAMDTGASNPATTNGTSSPTVRSSSFSSPAAGGTSSDAVSDREPILNLILRSELLGMDSGPPALHPSAGEVYR-RERMSEDGGGSGSRRDSFREEERKEEEEEEEEEYDSRRTTTHMAMSMASHSIGRSAGVKIGSGGVSRYSNGSSGGSPGSPGLLQFKPARERPQQDPHSSFSLLPMETTHRRLLSSPLKAKRKVSKTPFKVLDAPALQDDFYLNLVDWSSMNVLAVGLGTCVYLWSACTSTVTKLCDLGGEDAVSSVAWAPQGSHLAVGTSTGEVQVWDVDRCQQLRSLGGHSARVGTMSWNGQLLATGSRDRLICMRDLRAREPRIKKLHGHRQEVCGLRWSFDECHLASGGNDNKLYVWNQHSSQPIQKFAAHTAAVKALAWSPHQSGLLASGGGTADRHIRFWNTLTGKAMSEVDTGSQVCNLMWSRNVNEIVSTHGYSLNQIILWKYPSMAKVATLTGHTFRVLYLAMSPDGQTIVTGAGDETLRFWNAFPGAKN---TGNSLGTSLLFPVGHDIR 719
The following BLAST results are available for this feature:
BLAST of NO21G01320.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 Expect = 7.40e-231 / Id = 63.25 Sequence EWM22658.1
Match Name E-value Identity Description
EWM22658.1 7.400e-231 63.25 fizzy-related protein [Nannochloropsis gaditana] [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2296bp CACAGGAAAGTATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCG GGGGACAACATGAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCAC GCCCAATCGGCCCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTA GCTTTATGGGCGACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCG TCTTCATTTTTGACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCC TAGTACGAGCAAGCTTCACTACGAATATCAGTCAAGAATAAAAAGCCCAG TGAAACGCCGCATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTTCC CCTAAACGGACCCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGACGG CCTCGTGTACGGAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAATGG AGATTGCTTACTCATTGATGAACGAAGAAATTGACAATGCGGGATCGAAT CATGCCTCCTCCCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGGCC ATCCACCGACTCTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTCAT CATCAGTCCTCGCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACTTA CCCTTGACTGGGGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCGAC AACTTCGCCGCCTGACAGCAGGAGCACCAGTCCATCTGCGCTATCCGGTG CCGGCGACGTTGGCCCCGAGCGTCAACCCATTCTAAACATGCTTTTACGT AGCGAGCTCTTGGGCGTGGACCTTCACCATCCCTACTCCCGCCCTTCCTC TTCCGCCTTCTCTGGAGGCAAACACCACCTCAACGATGATCGCGCAGGAG GGGGAGGGTTACCTAGCGGCGCTGCGGACGGCAGAGGAAGCGACAGCAGT AGCAGCAGCATAAATGGCATAGATGGCACTGGCAGTAGTAGTAGCATCGG TAGACCGGCTGGAGGAGAAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCA GCAGCAGCAGCAGCAGCAGTCCCAATCTCCTTCAATTCAAACCGGCCCGT GAATGTCACTCGGAAGAGGTCCATCGTTCCTTTTCCCTCCTTCCCATGGG GCCTGCTCAACGCCGCCTTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAG TGAGCAAGGTCCCGTTCAAGGTGCTCGACGCCCCTGCACTGCAAGATGAT TTTTATCTCAACCTCGTTGACTGGTCGTCGCTTAATGTCCTCGCCGTCGG CCTGGGCACATGTGTCTATCTCTGGAGTGCTTGTACAAGCTCTGTTACGA AACTCTGCGATCTAGGAGAGGATGATTCCGTGACATCCGTCGCGTGGACG CAGCGAGGAACGCACTTGGCAGTAGGCACCAATACGGGAGAGGTCCAAAT GTGGGATGTTGGGAGATGTCAGCGGATTAGGAGCTTGTCCGGTCATTCCG CAAGGATAGGAACCATGTCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGT CGCGATCGCTTGATTTATTTGAGGGATGTCCGAGCACGGGAACCAAGAGT GAAGAAATTGCAGGGGCATAGACAGGAAGTATGTGGGTTGAGATGGTCAT TTGACGACTGCCAGCTTGCTTCCGGGGGAAATGACAACAAGCTTTATATA TGGACTTTGCATTCTTCCCAGCCTGTGCAGAAGTTCACGGAGCACACAGC AGCGGTAAAGGCTTTGGCATGGTCTCCGCATCAGGGGGGGTTGCTTGCGA GTGGGGGCGGAACGGCGGATAGACATATAAGGTTTTGGAATACCTTAACT GGGGCATCTCTAAGTCGGGTGGACACTGGCTCGCAGGTATGTAATTTGAT GTGGAGCAAAAATGTGAACGAGATTGTGAGTACGCATGGGTACAGTTTGA ATCAGATTATTTTGTGGCGGTACCCGAGTATGACGAAGGTGACCACTTTG ACGGGGCATACTTTTCGAGTGCTGTACCTGGCGATTTCTCCCGATGGACA GACGATTGTGACAGGTGCGGGGGATGAAACGTTGAGGTTTTGGAATGTGT TTCCTGGGGCGAAGAGCAGGGGGGGGGAGGGGTCGAGGTTGGGAACGAAT TTTTTGTTTCCTGTGGGGCATGACATTCGGTAGAGCTGGACAGGGGTAGA AGAAGCAGGAGGTGGTGGAAGAAGCGTGGGAGGGGCGTTGATTGGAGAAG AGGAAGGGAAGGAAAATGACACATGCAAATTATTCGCAAGCGAGTT back to top protein sequence of NO21G01320.1
>NO21G01320.1-protein ID=NO21G01320.1-protein|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bp MSSTAERIASSESGDNMNIDNSDSLPSPRTPNRPTSKGNPFLSPSSSFMG DSSSFSMLCGSPSSSFLTRQWSNGTPPGSPSTSKLHYEYQSRIKSPVKRR MSLEQQMANDASSPKRTHSPLALSRSLSDGLVYGDRFIPARNAPQMEIAY SLMNEEIDNAGSNHASSPFRGPAGVISTRPSTDSFSASPSVSVAASSSVL ASSSSSLSLFPDLPLTGGASATGSTATAATTSPPDSRSTSPSALSGAGDV GPERQPILNMLLRSELLGVDLHHPYSRPSSSAFSGGKHHLNDDRAGGGGL PSGAADGRGSDSSSSSINGIDGTGSSSSIGRPAGGEGGPGSLQRSSSSSS SSSPNLLQFKPARECHSEEVHRSFSLLPMGPAQRRLLSTPFKAKRKVSKV PFKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSSVTKLCD LGEDDSVTSVAWTQRGTHLAVGTNTGEVQMWDVGRCQRIRSLSGHSARIG TMSWNGQVLASGSRDRLIYLRDVRAREPRVKKLQGHRQEVCGLRWSFDDC QLASGGNDNKLYIWTLHSSQPVQKFTEHTAAVKALAWSPHQGGLLASGGG TADRHIRFWNTLTGASLSRVDTGSQVCNLMWSKNVNEIVSTHGYSLNQII LWRYPSMTKVTTLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPGA KSRGGEGSRLGTNFLFPVGHDIR* back to top mRNA from alignment at chr21:396316..398881-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2566bp|location=Sequence derived from alignment at chr21:396316..398881- (Nannochloropsis oceanica) CACAGGAAAGTATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCG
GGGGACAACATGAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCAC
GCCCAATCGGCCCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTA
GCTTTATGGGCGACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCG
TCTTCATTTTTGACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCC
TAGTACGAGCAAGCTTCACTACGAATATCAG GTACGTTGGTGAGTGTGTG
CTGTCTGCTGCATGGGTTGGATTGGATACACATGCCTTCATGGCTTTATG
ACAACCTCACCTTTGACCATGGATTAAACACAGTCAAGAATAAAAAGCCC
AGTGAAACGCCGCATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTT
CCCCTAAACGGACCCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGAC
GGCCTCGTGTACGGAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAAT
GGAGATTGCTTACTCATTGATGAACGAAGAAATTGACAATGCGGGATCGA
ATCATGCCTCCTCCCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGG
CCATCCACCGACTCTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTC
ATCATCAGTCCTCGCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACT
TACCCTTGACTGGGGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCG
ACAACTTCGCCGCCTGACAGCAGGAGCACCAGTCCATCTGCGCTAT GTGA
GTGTCTTTATTTTATTTTATTTCCTTTTCTTTCTGGCTCTCACGTACATA
CTTGTTGGCTGTACAACCCGCCCACCGATAGGTCAACCCGTCCTTTTCCT
CCCCTTCTTCCTTCTATACACTCATTGTCCCATATATCTCAACCCTCCCC
CCCAAACAAAACAGCCGGTGCCGGCGACGTTGGCCCCGAGCGTCAACCCA
TTCTAAACATGCTTTTACGTAGCGAGCTCTTGGGCGTGGACCTTCACCAT
CCCTACTCCCGCCCTTCCTCTTCCGCCTTCTCTGGAGGCAAACACCACCT
CAACGATGATCGCGCAGGAGGGGGAGGGTTACCTAGCGGCGCTGCGGACG
GCAGAGGAAGCGACAGCAGTAGCAGCAGCATAAATGGCATAGATGGCACT
GGCAGTAGTAGTAGCATCGGTAGACCGGCTGGAGGAGAAGGAGGACCGGG
AAGCTTGCAGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCCAATCTCC
TTCAATTCAAACCGGCCCGTGAATGTCACTCGGAAGAGGTCCATCGTTCC
TTTTCCCTCCTTCCCATGGGGCCTGCTCAACGCCGCCTTCTCTCCACCCC
TTTCAAGGCCAAGCGTAAAGTGAGCAAGGTCCCGTTCAAGGTGCTCGACG
CCCCTGCACTGCAAGATGATTTTTATCTCAACCTCGTTGACTGGTCGTCG
CTTAATGTCCTCGCCGTCGGCCTGGGCACATGTGTCTATCTCTGGAGTGC
TTGTACAAGCTCTGTTACGAAACTCTGCGATCTAGGAGAGGATGATTCCG
TGACATCCGTCGCGTGGACGCAGCGAGGAACGCACTTGGCAGTAGGCACC
AATACGGGAGAGGTCCAAATGTGGGATGTTGGGAGATGTCAGCGGATTAG
GAGCTTGTCCGGTCATTCCGCAAGGATAGGAACCATGTCGTGGAATGGCC
AAGTGCTGGCAAGCGGGAGTCGCGATCGCTTGATTTATTTGAGGGATGTC
CGAGCACGGGAACCAAGAGTGAAGAAATTGCAGGGGCATAGACAGGAAGT
ATGTGGGTTGAGATGGTCATTTGACGACTGCCAGCTTGCTTCCGGGGGAA
ATGACAACAAGCTTTATATATGGACTTTGCATTCTTCCCAGCCTGTGCAG
AAGTTCACGGAGCACACAGCAGCGGTAAAGGCTTTGGCATGGTCTCCGCA
TCAGGGGGGGTTGCTTGCGAGTGGGGGCGGAACGGCGGATAGACATATAA
GGTTTTGGAATACCTTAACTGGGGCATCTCTAAGTCGGGTGGACACTGGC
TCGCAGGTATGTAATTTGATGTGGAGCAAAAATGTGAACGAGATTGTGAG
TACGCATGGGTACAGTTTGAATCAGATTATTTTGTGGCGGTACCCGAGTA
TGACGAAGGTGACCACTTTGACGGGGCATACTTTTCGAGTGCTGTACCTG
GCGATTTCTCCCGATGGACAGACGATTGTGACAGGTGCGGGGGATGAAAC
GTTGAGGTTTTGGAATGTGTTTCCTGGGGCGAAGAGCAGGGGGGGGGAGG
GGTCGAGGTTGGGAACGAATTTTTTGTTTCCTGTGGGGCATGACATTCGG
TAG AGCTGGACAGGGGTAGAAGAAGCAGGAGGTGGTGGAAGAAGCGTGGG
AGGGGCGTTGATTGGAGAAGAGGAAGGGAAGGAAAATGACACATGCAAAT
TATTCGCAAGCGAGTT back to top Coding sequence (CDS) from alignment at chr21:396316..398881-
>NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=CDS|length=2172bp|location=Sequence derived from alignment at chr21:396316..398881- (Nannochloropsis oceanica) ATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCGGGGGACAACAT GAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCACGCCCAATCGGC CCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTAGCTTTATGGGC GACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCGTCTTCATTTTT GACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCCTAGTACGAGCA AGCTTCACTACGAATATCAGTCAAGAATAAAAAGCCCAGTGAAACGCCGC ATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTTCCCCTAAACGGAC CCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGACGGCCTCGTGTACG GAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAATGGAGATTGCTTAC TCATTGATGAACGAAGAAATTGACAATGCGGGATCGAATCATGCCTCCTC CCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGGCCATCCACCGACT CTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTCATCATCAGTCCTC GCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACTTACCCTTGACTGG GGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCGACAACTTCGCCGC CTGACAGCAGGAGCACCAGTCCATCTGCGCTATCCGGTGCCGGCGACGTT GGCCCCGAGCGTCAACCCATTCTAAACATGCTTTTACGTAGCGAGCTCTT GGGCGTGGACCTTCACCATCCCTACTCCCGCCCTTCCTCTTCCGCCTTCT CTGGAGGCAAACACCACCTCAACGATGATCGCGCAGGAGGGGGAGGGTTA CCTAGCGGCGCTGCGGACGGCAGAGGAAGCGACAGCAGTAGCAGCAGCAT AAATGGCATAGATGGCACTGGCAGTAGTAGTAGCATCGGTAGACCGGCTG GAGGAGAAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCAGCAGCAGCAGC AGCAGCAGTCCCAATCTCCTTCAATTCAAACCGGCCCGTGAATGTCACTC GGAAGAGGTCCATCGTTCCTTTTCCCTCCTTCCCATGGGGCCTGCTCAAC GCCGCCTTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAGTGAGCAAGGTC CCGTTCAAGGTGCTCGACGCCCCTGCACTGCAAGATGATTTTTATCTCAA CCTCGTTGACTGGTCGTCGCTTAATGTCCTCGCCGTCGGCCTGGGCACAT GTGTCTATCTCTGGAGTGCTTGTACAAGCTCTGTTACGAAACTCTGCGAT CTAGGAGAGGATGATTCCGTGACATCCGTCGCGTGGACGCAGCGAGGAAC GCACTTGGCAGTAGGCACCAATACGGGAGAGGTCCAAATGTGGGATGTTG GGAGATGTCAGCGGATTAGGAGCTTGTCCGGTCATTCCGCAAGGATAGGA ACCATGTCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGTCGCGATCGCTT GATTTATTTGAGGGATGTCCGAGCACGGGAACCAAGAGTGAAGAAATTGC AGGGGCATAGACAGGAAGTATGTGGGTTGAGATGGTCATTTGACGACTGC CAGCTTGCTTCCGGGGGAAATGACAACAAGCTTTATATATGGACTTTGCA TTCTTCCCAGCCTGTGCAGAAGTTCACGGAGCACACAGCAGCGGTAAAGG CTTTGGCATGGTCTCCGCATCAGGGGGGGTTGCTTGCGAGTGGGGGCGGA ACGGCGGATAGACATATAAGGTTTTGGAATACCTTAACTGGGGCATCTCT AAGTCGGGTGGACACTGGCTCGCAGGTATGTAATTTGATGTGGAGCAAAA ATGTGAACGAGATTGTGAGTACGCATGGGTACAGTTTGAATCAGATTATT TTGTGGCGGTACCCGAGTATGACGAAGGTGACCACTTTGACGGGGCATAC TTTTCGAGTGCTGTACCTGGCGATTTCTCCCGATGGACAGACGATTGTGA CAGGTGCGGGGGATGAAACGTTGAGGTTTTGGAATGTGTTTCCTGGGGCG AAGAGCAGGGGGGGGGAGGGGTCGAGGTTGGGAACGAATTTTTTGTTTCC TGTGGGGCATGACATTCGGTAG back to top