NO21G01310.1, NO21G01310.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G01310.1
Unique NameNO21G01310.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length369
Alignment locationchr21:395054..395960 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:395054..395960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G01310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Position :
0
Zoom :
x 1
50100150200250300350Sequence
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01310NO21G01310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G01310.1NO21G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G01310.1.cds1NO21G01310.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G01310.1.cds2NO21G01310.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G01310.1.cds3NO21G01310.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G01310.1 ID=NO21G01310.1|Name=NO21G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=369bp
ATGAAGGAGCCCACGGCGTACGAGAGGAACATGGAGACCCTCACCACTTT
CCTCCTGCCCTTTGTCGTGACCATTTACCTGGGCCTGGTCTTGAAGAAGT
ATTCCCTAGAAGGCTACACTGACTTAGTCACTAGTGATTATCTCCTGCTT
GGGTTTAAGGACATTGAGGCATTGCGACGGCATTTGGTCGATAATCTGAT
CGGCTCTTGCGTGTGGGGCCTGACCTTCATGTACATCCGCAAGATGGGCA
ACCCTGAGATTCGGCACACGGCCTGGAAGAACACTCAGGACGGGTACTTT
GCCACACTGACGACATTCATCACAGGCTTGCTAAAGGCCGTATGCAACAA
TTTTGCCAACAAGCTTTGA
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protein sequence of NO21G01310.1

>NO21G01310.1-protein ID=NO21G01310.1-protein|Name=NO21G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=123bp
MKEPTAYERNMETLTTFLLPFVVTIYLGLVLKKYSLEGYTDLVTSDYLLL
GFKDIEALRRHLVDNLIGSCVWGLTFMYIRKMGNPEIRHTAWKNTQDGYF
ATLTTFITGLLKAVCNNFANKL*
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mRNA from alignment at chr21:395054..395960-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G01310.1 ID=NO21G01310.1|Name=NO21G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=907bp|location=Sequence derived from alignment at chr21:395054..395960- (Nannochloropsis oceanica)
ATGAAGGAGCCCACGGCGTACGAGAGGAACATGGAGACCCTCACCACTTT
CCTCCTGCCCTTTGTCGTGACCATTTACCTGGGCCTGGTCTTGAAGAAGT
ATTCCCTAGAAGGCTACACTGACTTAGTCACTAGTGATTATCTCCTGCTT
GGTACGTGCTGGTGGTGATGGAGTTTATGGACGGAGCGAAGGAAGGAAGG
GAGAGCGGGAGAGAGTTGCAAGAGTTCGCGGGGGAGTACGGATAATGAGA
GTAAATGTTGTCGCTACGCCTGGTACTGCGCCCGGGTGCATGCGCATGTG
TGTTTTCATGTGCGTTTAGTTACTAAGTATCTGCTTTGTGGCTTAAGAAG
AGGAGGCTCATTGAATGGATGAGATCAGTCACTTGACTCAAAAAAGGGAG
AAACACCTCCGTGGTAGTACCCGTTGCATGGTCTCTTCCCCATAGGACTA
CTTGATCTTCGATCTTGCTTGCCAATCCCCCACTCCCTACCTCCCTAACT
TGTTTTCATAACGACAGGGTTTAAGGACATTGAGGCATTGCGACGGCATT
TGGTCGATAATCTGATCGGCTCTTGCGTGTGGGGCCTGACCTTCATGTAC
ATCCGCAAGATGGGCAACCCTGAGATTCGGCACACGGCCTGGAAGAACAC
TCAGGTAAGGGGAGAGCAAGGATGGGGATGAGCAAGGGAAATGCCATGTA
ATCACTTTCCTGAAATTTGCTTTGTTGTCTGCATTCTTTTTCCACCGTGC
CTCCCTCCTCTTCCCCCGGTGCGTCCAAGTGAGTCATTCAAATCACAGAC
TCAACAGAAAATACATATATAAACAGGACGGGTACTTTGCCACACTGACG
ACATTCATCACAGGCTTGCTAAAGGCCGTATGCAACAATTTTGCCAACAA
GCTTTGA
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Coding sequence (CDS) from alignment at chr21:395054..395960-

>NO21G01310.1 ID=NO21G01310.1|Name=NO21G01310.1|organism=Nannochloropsis oceanica|type=CDS|length=369bp|location=Sequence derived from alignment at chr21:395054..395960- (Nannochloropsis oceanica)
ATGAAGGAGCCCACGGCGTACGAGAGGAACATGGAGACCCTCACCACTTT
CCTCCTGCCCTTTGTCGTGACCATTTACCTGGGCCTGGTCTTGAAGAAGT
ATTCCCTAGAAGGCTACACTGACTTAGTCACTAGTGATTATCTCCTGCTT
GGGTTTAAGGACATTGAGGCATTGCGACGGCATTTGGTCGATAATCTGAT
CGGCTCTTGCGTGTGGGGCCTGACCTTCATGTACATCCGCAAGATGGGCA
ACCCTGAGATTCGGCACACGGCCTGGAAGAACACTCAGGACGGGTACTTT
GCCACACTGACGACATTCATCACAGGCTTGCTAAAGGCCGTATGCAACAA
TTTTGCCAACAAGCTTTGA
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Synonyms
Publications