NO21G01120.1, NO21G01120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G01120.1
Unique NameNO21G01120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2220
Alignment locationchr21:348176..350488 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:348176..350488 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO21G01120.1 vs.
Match: EWM22619.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana])

HSP 1 Score: 349.7 bits (896), Expect = 9.500e-93
Identity = 191/295 (64.75%), Postives = 224/295 (75.93%), Query Frame = 0 
Query:   16 KLSAEALQKREARARKREQEVGSGSSSSSAGQGNQRCPQDKTSKEVGVEEDMWTNFYDFSSFSLKVREEFGGEACVGGTQWPGGARVARYLDNPIVFPAGALKGKTLLDLGSGCGLVAAVAAKHGACVLAAEKDIVIPLLKENLASNNVLLEE-EMEHSNNLSSSLSVPST----TTFQEGKVAVQEFYWGADAHHPQAPFDIVVAAACLYMPKTVLLLLHTLWNVSDDNSLVILCSILGANTLEAFVREVGSFFEITALNDTDGCVIGTSEEGNLASIDVATRVLVLRRKAQRG 306
            + SAEA  KR ARA +R+ +    +SS  A Q +  C QD+ S      ++MW N Y FSSF L V+EEFGGE+CVGGTQWPGG RVARYLDNP  FP G LKGKTLLDLGSGCGLVAAVAAKHGA V+AAEKDIVIPLLKENL +N VLL+    EHS   +S  S+PS+    +  +EGKV V EFYWG DA HP APFD+++AAACLYMPKTV LLLHTLWNVSD  SL++LCSILGA+TL+AF  EVG FF I AL++T+G VIGTS + NL+SIDVATR+L+L RK Q G
Sbjct:   14 RYSAEAFAKRAARALRRQGQ----TSSREAEQKD--CEQDEES------DNMWENTYAFSSFKLSVQEEFGGESCVGGTQWPGGVRVARYLDNPKAFPPGTLKGKTLLDLGSGCGLVAAVAAKHGARVVAAEKDIVIPLLKENLTTNGVLLDHGASEHSKGNTSHASLPSSLPSNSPLEEGKVVVHEFYWGPDARHPLAPFDLIIAAACLYMPKTVPLLLHTLWNVSDSQSLILLCSILGADTLQAFKEEVGGFFHIRALDETNGNVIGTSSDDNLSSIDVATRILILERKRQSG 296
The following BLAST results are available for this feature:
BLAST of NO21G01120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Position :
0
Zoom :
x 1
2004006008001000120014001600180020002200Expect = 9.50e-93 / Id = 64.75SequenceEWM22619.1
Match NameE-valueIdentityDescription
EWM22619.19.500e-9364.75Nicotinamide N-methyltransferase, putative [Nannoc... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01120NO21G01120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G01120.1NO21G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G01120.1.cds1NO21G01120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G01120.1.cds2NO21G01120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G01120.1 ID=NO21G01120.1|Name=NO21G01120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2220bp
GCCCTTGCTTCTACTAGCTCTTGATCCTTCCCCCCGTTTAAGAGTCCCCT
GACTTTTCATTTTCGTTCATCTCATTGTCCCATAACAAAATGTGCACATA
TTATTGATCCCTCTCCTCGCACGCGTTCCTCTATTTCACCTTCTCCGCTA
CGGCTGAAAGACTGCAAGTCAAGTCAGCGAATAGCTCTGGTGTGTTTCTC
CCTACAATTTAAATATACATAATGAATGCTTTCATTCTTTTGCTCTTCAC
TTCACCTGTTCAACCTATGCACATGAATTCTCCCCTCACCCGCCTGATTC
AAGTCTACAGTCTCGGTGAGAGGGCCCCGAAAATGATACGCCAGCGTAAC
AACTTGTACCATTTTCTGCCTCCCTTCCCCTTGACATGCACAGGCCAAGC
GCCTCACCAGTTCCACGAGCCGCTCAAGTAAAGAGGGATAAATGTATAGG
AAAATTACGACTTTCTCACCTCCTCCCGTCTCACTCATTTGAGCCTCCAC
CGCTGCTATTAAAAACCGCAACGCCTTATCTTGATCATCTAACAGGTCTA
ATCTAAAGAATTTCACCTTATCTCTCAAGCCTTCCTCCGTAGCAATGGTT
CTGGCCAGGTCAATACACTCCTGGGATATGTCCACGCCCAAGCCACGGCA
TCCACGCAGCAATGCCGCCGCAATCAGCGGCCGTCCATCCCCACAGCCCA
AGTCGACTATTATATGCCGAGGACCTATTTGCAAAGCCTCGAAAATGGTG
GCCAAATCTGTGGCTGTGGTGGGCAAAAAAGGAGAGAGGGTTCTTCGTTC
GGCACACGCTTGCGCTTCGTCTATACACGCGTTCATATGGATATCTTCGA
GCTCATCGGTCGCTGCTTGATGCCGACTCACAAAAGCCTCAATTTGCACA
GTGAATAGCTGTAGCAAGGGTTGTGGTGACGGTTTTGTCGCCATAGCCTG
TAGGAGGGACAGGCAAAGGACGGGAGGTTATTGCTGAGTAAAGGGGCTCA
TATCTCCTTCCCCAGGTTGTAGTGATAGTGCCCTCAGCTTTGGGAAAGTG
GGTGGATGTTGTGTGGGTCATAGCTTCTTGGTGGAGTCGAGTCCAAAAGC
GTTTTCAGCTCGAGCAAAGCTAGGAGGTTGTAGATCATAATTTCTCCTCC
TAACTTTAGACTACGACACCACTACCGAAGGAAAATCAGTCGCCGCTGGA
AGCATGAATGAAAAAGGCTGCTCTGGTGACGAGGCAATGGGCCTAAGAAA
GCTGTCAGCAGAAGCACTTCAAAAGCGTGAAGCAAGGGCAAGGAAGCGAG
AGCAGGAGGTAGGCAGCGGCAGCAGCAGCAGCAGCGCTGGGCAAGGCAAC
CAACGCTGCCCCCAGGACAAGACAAGCAAGGAAGTCGGAGTGGAAGAAGA
CATGTGGACGAACTTTTACGACTTTTCGTCCTTCTCCCTCAAAGTTCGAG
AGGAATTTGGGGGCGAGGCGTGCGTTGGCGGTACGCAGTGGCCAGGTGGT
GCACGCGTGGCGCGATACCTCGACAACCCCATCGTCTTTCCTGCAGGCGC
TTTGAAGGGCAAAACCTTGCTGGACCTTGGTTCAGGTTGTGGTTTGGTCG
CAGCAGTAGCTGCTAAGCACGGTGCCTGTGTACTAGCAGCAGAAAAGGAT
ATTGTGATCCCTTTGCTTAAGGAAAACTTGGCAAGCAATAATGTCTTGCT
GGAGGAGGAGATGGAGCACAGCAACAATTTGTCGTCGTCCTTATCAGTAC
CCAGCACCACAACCTTCCAAGAGGGCAAGGTGGCCGTGCAGGAATTTTAC
TGGGGGGCTGACGCGCACCACCCTCAGGCACCGTTCGATATTGTGGTCGC
CGCGGCTTGCTTGTACATGCCTAAGACGGTGTTACTGCTCCTGCATACGC
TTTGGAACGTTTCGGACGACAATAGTTTAGTCATTTTGTGCTCTATTTTA
GGGGCTAACACGCTGGAGGCATTTGTGAGGGAAGTGGGGTCCTTCTTTGA
AATAACTGCGTTGAACGACACGGATGGCTGCGTAATTGGGACGAGCGAGG
AAGGAAACTTGGCGTCAATTGACGTGGCCACACGGGTTTTGGTGTTGCGG
CGCAAGGCCCAACGTGGGGTGGGCTTGGGATTAGACCTTGGGGGCTCGGA
TCGCCGTGAGTCTAGAAAAGTACCACTGTAACACTTTTAAAATAAAGGAG
CAATGAATGGACGAGGAAAA
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protein sequence of NO21G01120.1

>NO21G01120.1-protein ID=NO21G01120.1-protein|Name=NO21G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MNEKGCSGDEAMGLRKLSAEALQKREARARKREQEVGSGSSSSSAGQGNQ
RCPQDKTSKEVGVEEDMWTNFYDFSSFSLKVREEFGGEACVGGTQWPGGA
RVARYLDNPIVFPAGALKGKTLLDLGSGCGLVAAVAAKHGACVLAAEKDI
VIPLLKENLASNNVLLEEEMEHSNNLSSSLSVPSTTTFQEGKVAVQEFYW
GADAHHPQAPFDIVVAAACLYMPKTVLLLLHTLWNVSDDNSLVILCSILG
ANTLEAFVREVGSFFEITALNDTDGCVIGTSEEGNLASIDVATRVLVLRR
KAQRGVGLGLDLGGSDRRESRKVPL*
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mRNA from alignment at chr21:348176..350488-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G01120.1 ID=NO21G01120.1|Name=NO21G01120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2313bp|location=Sequence derived from alignment at chr21:348176..350488- (Nannochloropsis oceanica)
GCCCTTGCTTCTACTAGCTCTTGATCCTTCCCCCCGTTTAAGAGTCCCCT
GACTTTTCATTTTCGTTCATCTCATTGTCCCATAACAAAATGTGCACATA
TTATTGATCCCTCTCCTCGCACGCGTTCCTCTATTTCACCTTCTCCGCTA
CGGCTGAAAGACTGCAAGTCAAGTCAGCGAATAGCTCTGGTGTGTTTCTC
CCTACAATTTAAATATACATAATGAATGCTTTCATTCTTTTGCTCTTCAC
TTCACCTGTTCAACCTATGCACATGAATTCTCCCCTCACCCGCCTGATTC
AAGTCTACAGTCTCGGTGAGAGGGCCCCGAAAATGATACGCCAGCGTAAC
AACTTGTACCATTTTCTGCCTCCCTTCCCCTTGACATGCACAGGCCAAGC
GCCTCACCAGTTCCACGAGCCGCTCAAGTAAAGAGGGATAAATGTATAGG
AAAATTACGACTTTCTCACCTCCTCCCGTCTCACTCATTTGAGCCTCCAC
CGCTGCTATTAAAAACCGCAACGCCTTATCTTGATCATCTAACAGGTCTA
ATCTAAAGAATTTCACCTTATCTCTCAAGCCTTCCTCCGTAGCAATGGTT
CTGGCCAGGTCAATACACTCCTGGGATATGTCCACGCCCAAGCCACGGCA
TCCACGCAGCAATGCCGCCGCAATCAGCGGCCGTCCATCCCCACAGCCCA
AGTCGACTATTATATGCCGAGGACCTATTTGCAAAGCCTCGAAAATGGTG
GCCAAATCTGTGGCTGTGGTGGGCAAAAAAGGAGAGAGGGTTCTTCGTTC
GGCACACGCTTGCGCTTCGTCTATACACGCGTTCATATGGATATCTTCGA
GCTCATCGGTCGCTGCTTGATGCCGACTCACAAAAGCCTCAATTTGCACA
GTGAATAGCTGTAGCAAGGGTTGTGGTGACGGTTTTGTCGCCATAGCCTG
TAGGAGGGACAGGCAAAGGACGGGAGGTTATTGCTGAGTAAAGGGGCTCA
TATCTCCTTCCCCAGGTTGTAGTGATAGTGCCCTCAGCTTTGGGAAAGTG
GGTGGATGTTGTGTGGGTCATAGCTTCTTGGTGGAGTCGAGTCCAAAAGC
GTTTTCAGCTCGAGCAAAGCTAGGAGGTTGTAGATCATAATTTCTCCTCC
TAACTTTAGACTACGACACCACTACCGAAGGAAAATCAGTCGCCGCTGGA
AGCATGAATGAAAAAGGCTGCTCTGGTGACGAGGCAATGGGCCTAAGAAA
GCTGTCAGCAGAAGCACTTCAAAAGCGTGAAGCAAGGGCAAGGAAGCGAG
AGCAGGAGGTAGGCAGCGGCAGCAGCAGCAGCAGCGCTGGGCAAGGCAAC
CAACGCTGCCCCCAGGACAAGACAAGCAAGGAAGTCGGAGTGGAAGAAGA
CATGTGGACGAACTTTTACGACTTTTCGTCCTTCTCCCTCAAAGTTCGAG
AGGAATTTGGGGGCGAGGCGTGCGTTGGCGGTACGCAGTGGCCAGGTAAG
TCTGTCAGTCTGTGAAGAGCTAGAGTGCATCCTTGTGCAAAAGTCTTTAC
ACTTTCTCTCTCCCTCCCACGTTCCAATGCTCTTACAGGTGGTGCACGCG
TGGCGCGATACCTCGACAACCCCATCGTCTTTCCTGCAGGCGCTTTGAAG
GGCAAAACCTTGCTGGACCTTGGTTCAGGTTGTGGTTTGGTCGCAGCAGT
AGCTGCTAAGCACGGTGCCTGTGTACTAGCAGCAGAAAAGGATATTGTGA
TCCCTTTGCTTAAGGAAAACTTGGCAAGCAATAATGTCTTGCTGGAGGAG
GAGATGGAGCACAGCAACAATTTGTCGTCGTCCTTATCAGTACCCAGCAC
CACAACCTTCCAAGAGGGCAAGGTGGCCGTGCAGGAATTTTACTGGGGGG
CTGACGCGCACCACCCTCAGGCACCGTTCGATATTGTGGTCGCCGCGGCT
TGCTTGTACATGCCTAAGACGGTGTTACTGCTCCTGCATACGCTTTGGAA
CGTTTCGGACGACAATAGTTTAGTCATTTTGTGCTCTATTTTAGGGGCTA
ACACGCTGGAGGCATTTGTGAGGGAAGTGGGGTCCTTCTTTGAAATAACT
GCGTTGAACGACACGGATGGCTGCGTAATTGGGACGAGCGAGGAAGGAAA
CTTGGCGTCAATTGACGTGGCCACACGGGTTTTGGTGTTGCGGCGCAAGG
CCCAACGTGGGGTGGGCTTGGGATTAGACCTTGGGGGCTCGGATCGCCGT
GAGTCTAGAAAAGTACCACTGTAACACTTTTAAAATAAAGGAGCAATGAA
TGGACGAGGAAAA
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Coding sequence (CDS) from alignment at chr21:348176..350488-

>NO21G01120.1 ID=NO21G01120.1|Name=NO21G01120.1|organism=Nannochloropsis oceanica|type=CDS|length=978bp|location=Sequence derived from alignment at chr21:348176..350488- (Nannochloropsis oceanica)
ATGAATGAAAAAGGCTGCTCTGGTGACGAGGCAATGGGCCTAAGAAAGCT
GTCAGCAGAAGCACTTCAAAAGCGTGAAGCAAGGGCAAGGAAGCGAGAGC
AGGAGGTAGGCAGCGGCAGCAGCAGCAGCAGCGCTGGGCAAGGCAACCAA
CGCTGCCCCCAGGACAAGACAAGCAAGGAAGTCGGAGTGGAAGAAGACAT
GTGGACGAACTTTTACGACTTTTCGTCCTTCTCCCTCAAAGTTCGAGAGG
AATTTGGGGGCGAGGCGTGCGTTGGCGGTACGCAGTGGCCAGGTGGTGCA
CGCGTGGCGCGATACCTCGACAACCCCATCGTCTTTCCTGCAGGCGCTTT
GAAGGGCAAAACCTTGCTGGACCTTGGTTCAGGTTGTGGTTTGGTCGCAG
CAGTAGCTGCTAAGCACGGTGCCTGTGTACTAGCAGCAGAAAAGGATATT
GTGATCCCTTTGCTTAAGGAAAACTTGGCAAGCAATAATGTCTTGCTGGA
GGAGGAGATGGAGCACAGCAACAATTTGTCGTCGTCCTTATCAGTACCCA
GCACCACAACCTTCCAAGAGGGCAAGGTGGCCGTGCAGGAATTTTACTGG
GGGGCTGACGCGCACCACCCTCAGGCACCGTTCGATATTGTGGTCGCCGC
GGCTTGCTTGTACATGCCTAAGACGGTGTTACTGCTCCTGCATACGCTTT
GGAACGTTTCGGACGACAATAGTTTAGTCATTTTGTGCTCTATTTTAGGG
GCTAACACGCTGGAGGCATTTGTGAGGGAAGTGGGGTCCTTCTTTGAAAT
AACTGCGTTGAACGACACGGATGGCTGCGTAATTGGGACGAGCGAGGAAG
GAAACTTGGCGTCAATTGACGTGGCCACACGGGTTTTGGTGTTGCGGCGC
AAGGCCCAACGTGGGGTGGGCTTGGGATTAGACCTTGGGGGCTCGGATCG
CCGTGAGTCTAGAAAAGTACCACTGTAA
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Synonyms
Publications