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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr21 | genome | chr21:256978..260164 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G00760.1 vs.
Match: EWM22579.1 (Enolase-phosphatase E1 [Nannochloropsis gaditana]) HSP 1 Score: 712.2 bits (1837), Expect = 1.700e-201 Identity = 387/619 (62.52%), Postives = 454/619 (73.34%), Query Frame = 0
Query: 1 MRAWFLSDPEQECTAAILQELGACVGPAKEALATTGMEAVVGETMELSEEHLGAAFAETVKELGREHCLQDSNGQEYFSLSDGRVYIDVRDSADAWIRIALSKKDALILPNGMWRRLVLPSEEPYV---VLERRTKSSSSSTSGSSSSTSNGKESHFVKIYRFSSRDDEQRLASLRKEEAGKERGGMQQLIVDLCRQFYELGWVTGTGGSISIRHGNRVYMTPSGVQKERILPEELYVLDMSGNQLYAPPESKPGRARLKLTACAPLFFHSYRIRNAGAVIHSHGMDCVLATLLQGEHATEFRMTHQEMIKGIAGHGYRSTLVIPIIENTPHEADLADSLGEAIRKYPEATAVLVRRHGIYIWGSTWMQAKTQAECYHYLFRLAVEMHRLGLDYTTPPALSCGNDDGVQSLPFSSRELFPSREREAKEASA-GMGCCSGGGGGGEGGIMVNDHCLHCTSQVKEGGRAGGRAGGRAIKHVLMDIEGTTTSISFVHDTLFPYAKSAVGAHVREKLLQKDPEMLLDLAALRVQAMVDSQGEGGTEVPMIPEGDETAEGTEKVVEAVVRNVEWQMGKDRKTTALKQLQGHIWRAGYEKGEILSHVYEDVPEALRRWSR-GKGG 615
MRAW+L+DP Q CT AIL+ELGACVG A E G + + +SE+ LGAAFA+T+KE GREHC+ + + F++ G+VYIDVRDSADAWIR+ L K+D L LP+ +WRRLV +E+ +V + R S+ S + S+ + G + VK YRF+S DE+R ++ + G++ GG +QLIVDLCRQFY+LGWVTGTGGSISIR GNRV+MTPSGVQKERILPEELY+LDM GN LY PPES+PGR+ LKLTACAPLFFH+YRIR+AGAVIHSHGMDCVLATLLQGE ATEF++THQEMIKGIAGHGYRSTLVIPIIENTPHEADLADSL +AIR+YPE TAVLVRRHGIYIWG TWMQAKTQAECYHYLFRLAVEMHRLG+DYT P DG P ++E+EA A GMGCCSG GGG G H L+ + + GR IKHVLMDIEGTTTSI FVH LFPYA + VGAHVREKL + DPE+L D+ ALR D EG +P EG E G E ++EAVV+NV WQM +D KTTALK+LQGHIWRAGY KG + SHVYEDVP AL RW++ GKGG
Sbjct: 1 MRAWYLNDPHQACTPAILEELGACVGKAFEP--DKGSDTLF--LTAISEKELGAAFADTLKEFGREHCMGAVSEVQDFNVVGGQVYIDVRDSADAWIRVLLFKEDRLTLPSSVWRRLVPTTEDIHVDVAIASRPDPSNGVSKAASNGAGRKGGSAFSVKTYRFASPADERRAMAVWTQRRGQD-GGTRQLIVDLCRQFYDLGWVTGTGGSISIREGNRVFMTPSGVQKERILPEELYILDMRGNHLYVPPESQPGRSPLKLTACAPLFFHTYRIRDAGAVIHSHGMDCVLATLLQGEDATEFQITHQEMIKGIAGHGYRSTLVIPIIENTPHEADLADSLADAIRRYPETTAVLVRRHGIYIWGKTWMQAKTQAECYHYLFRLAVEMHRLGIDYTATP-----RGDGATLSP-----AMLTKEKEALLARGEGMGCCSGAGGGELQG----SHALNGSHE------NAGRYEKSGIKHVLMDIEGTTTSIDFVHQVLFPYASAQVGAHVREKLAENDPEVLGDIQALR-----DGCPEGCPPIP--EEGGEG--GREGLMEAVVKNVRWQMERDLKTTALKRLQGHIWRAGYAKGALHSHVYEDVPGALARWTQGGKGG 585
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO21G00760.1 ID=NO21G00760.1|Name=NO21G00760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2371bp AAAATGAACAGAAAGTCACCTGTTATTCCCTTGGGGAAAAAATGCGGGCG TGGTTCCTGAGCGATCCCGAACAAGAATGCACGGCTGCCATCTTACAGGA GTTGGGAGCATGCGTGGGGCCAGCAAAAGAGGCTTTGGCCACGACGGGGA TGGAGGCAGTGGTGGGGGAAACAATGGAATTGAGTGAGGAGCACCTTGGC GCGGCGTTTGCGGAGACGGTGAAGGAACTCGGCCGCGAGCACTGTCTCCA AGACAGCAACGGACAAGAGTACTTTTCTCTCTCCGACGGGCGTGTGTACA TTGATGTCCGCGATAGTGCTGATGCTTGGATCCGCATTGCCTTAAGTAAG AAAGATGCCTTGATCTTGCCTAATGGTATGTGGCGTCGTCTTGTCCTTCC TTCCGAGGAACCCTATGTGGTGCTGGAACGGCGGACGAAGAGCAGCAGCA GCAGTACCAGCGGCAGCAGTAGCAGCACCAGCAATGGAAAGGAGTCTCAT TTCGTCAAGATTTATCGTTTTTCTTCCCGCGACGACGAGCAACGCCTGGC GAGCCTGAGGAAGGAGGAGGCAGGGAAGGAGAGAGGGGGAATGCAACAAT TGATTGTAGATTTGTGCCGGCAGTTCTACGAGTTGGGATGGGTAACAGGC ACTGGGGGAAGCATTAGCATTCGGCATGGGAACCGGGTGTACATGACACC GTCGGGTGTGCAGAAAGAGCGGATCTTGCCCGAGGAGCTGTATGTGCTCG ATATGAGCGGAAACCAGCTCTATGCGCCCCCTGAATCCAAGCCCGGTCGA GCTCGTCTGAAGCTCACGGCATGCGCCCCTCTTTTCTTCCACTCCTACCG TATACGCAATGCTGGTGCCGTTATCCACTCCCATGGCATGGACTGTGTCC TGGCCACCCTTCTCCAAGGCGAGCATGCCACTGAATTCCGCATGACACAC CAAGAAATGATTAAGGGTATTGCTGGGCACGGGTACCGCTCTACCCTCGT TATTCCCATCATTGAAAACACCCCCCATGAGGCGGACCTCGCCGACTCTC TTGGAGAAGCCATCAGAAAATACCCGGAAGCGACTGCTGTCTTGGTGCGA AGGCACGGCATTTATATCTGGGGCTCGACCTGGATGCAAGCCAAAACCCA AGCAGAGTGTTATCATTATTTGTTTAGATTAGCAGTAGAGATGCATCGAC TCGGACTTGATTACACGACCCCTCCTGCTCTTTCTTGTGGGAACGATGAT GGTGTACAATCTCTCCCATTTTCGTCGCGGGAATTGTTTCCAAGTCGTGA GAGGGAGGCAAAGGAGGCGAGCGCGGGGATGGGGTGTTGCAGCGGAGGAG GAGGAGGAGGGGAGGGTGGGATAATGGTGAACGACCACTGTCTTCACTGT ACAAGTCAAGTGAAGGAGGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAG GGCGATCAAGCACGTGTTGATGGACATTGAAGGGACAACAACATCCATTT CGTTTGTGCATGACACCTTGTTCCCCTACGCCAAGTCCGCTGTAGGTGCG CATGTCCGAGAAAAATTATTGCAAAAGGATCCTGAAATGTTACTGGACCT TGCCGCATTGCGGGTGCAAGCCATGGTGGACTCGCAGGGGGAGGGAGGGA CGGAGGTGCCAATGATTCCAGAAGGGGATGAAACCGCGGAAGGGACTGAG AAGGTAGTCGAGGCGGTAGTCCGAAATGTCGAGTGGCAGATGGGGAAGGA TAGGAAGACGACGGCCTTGAAGCAGCTGCAGGGGCACATCTGGAGGGCGG GGTATGAAAAGGGAGAAATTCTTTCTCATGTCTACGAGGATGTCCCTGAG GCGTTGCGGCGGTGGTCGCGAGGGAAGGGAGGAAGGGATGGAGGGATGGC GGGATTCAAGTTGGCGATGTATTCCAGTGGTTCGAGGGAGGCGCAACGGC TTTTGCTCGGGTACACGGCCATAGGAGGGGATTTGAGGGAGTACCTGAAT TGTTACTTTGATACGACGGTGGGGGGGAAGAGGGAGGAGAGGAGTTACAG GGAGATTGGACTATCGCTGGGTGTGGGGGGGATGGAGGAGGTTTTGTTTT TGACGGATGTAGTAGAAGAGGCGGTGGCGGCACGGAAGGCAGGCATGAGG GTCTTGTTGAGTGTAAGGCCTGGGAATGCGCCGATTGATGAAGAGTTGGG CAAGGGGTTCGCCAGAGTGTCTTCTTTTTCGGAAGTGGATGACTACTTGG AGGGAATGAAAGAGTTTCCTTCTTTGTAAGGGAAAAGGAAAGAGTTATGG AGTGAGAGAGAGGAGGGGGGAATTAGGGCGAGAGTATGTCTATCATCAAG GAAAAAGGCAAGGATATTAGG back to topprotein sequence of NO21G00760.1 >NO21G00760.1-protein ID=NO21G00760.1-protein|Name=NO21G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=746bp MRAWFLSDPEQECTAAILQELGACVGPAKEALATTGMEAVVGETMELSEE HLGAAFAETVKELGREHCLQDSNGQEYFSLSDGRVYIDVRDSADAWIRIA LSKKDALILPNGMWRRLVLPSEEPYVVLERRTKSSSSSTSGSSSSTSNGK ESHFVKIYRFSSRDDEQRLASLRKEEAGKERGGMQQLIVDLCRQFYELGW VTGTGGSISIRHGNRVYMTPSGVQKERILPEELYVLDMSGNQLYAPPESK PGRARLKLTACAPLFFHSYRIRNAGAVIHSHGMDCVLATLLQGEHATEFR MTHQEMIKGIAGHGYRSTLVIPIIENTPHEADLADSLGEAIRKYPEATAV LVRRHGIYIWGSTWMQAKTQAECYHYLFRLAVEMHRLGLDYTTPPALSCG NDDGVQSLPFSSRELFPSREREAKEASAGMGCCSGGGGGGEGGIMVNDHC LHCTSQVKEGGRAGGRAGGRAIKHVLMDIEGTTTSISFVHDTLFPYAKSA VGAHVREKLLQKDPEMLLDLAALRVQAMVDSQGEGGTEVPMIPEGDETAE GTEKVVEAVVRNVEWQMGKDRKTTALKQLQGHIWRAGYEKGEILSHVYED VPEALRRWSRGKGGRDGGMAGFKLAMYSSGSREAQRLLLGYTAIGGDLRE YLNCYFDTTVGGKREERSYREIGLSLGVGGMEEVLFLTDVVEEAVAARKA GMRVLLSVRPGNAPIDEELGKGFARVSSFSEVDDYLEGMKEFPSL* back to topmRNA from alignment at chr21:256978..260164+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO21G00760.1 ID=NO21G00760.1|Name=NO21G00760.1|organism=Nannochloropsis oceanica|type=mRNA|length=3187bp|location=Sequence derived from alignment at chr21:256978..260164+ (Nannochloropsis oceanica) AAAATGAACAGAAAGTCACCTGTTATTCCCTTGGGGAAAAAATGCGGGCG
TGGTTCCTGAGCGATCCCGAACAAGAATGCACGGCTGCCATCTTACAGGA
GTTGGGAGCATGCGTGGGGCCAGCAAAAGAGGCTTTGGCCACGACGGGGA
TGGAGGCAGTGGTGGGGGAAACAATGGAATTGAGTGAGGAGCACCTTGGC
GCGGCGTTTGCGGAGACGGTGAAGGTGAGTCTAGGGTCGGGTAGGTGCGG
GAAAATGTGGATTGGTTCAGGCAACATCATGACCTCCCCTCCACATTCAT
GCATCAATGACAACGCCTCCGCTAGTGATAAAGGATCCAGTAAACCAGGG
CGCTGTCGAGAAAAATATTCGAAGCACCCACTACCTGTCACATTTGTCTC
TCCACTCACTGACTCTTCTCCCAATTCACCAAACCCGCCAATCATTGCTC
AGGAACTCGGCCGCGAGCACTGTCTCCAAGACAGCAACGGACAAGAGTAC
TTTTCTCTCTCCGACGGGCGTGTGTACATTGATGTCCGCGATAGTGCTGA
TGCTTGGATCCGCATTGCCTTAAGTAAGAAAGATGCCTTGATCTTGCCTA
ATGGTATGTGGCGTCGTCTTGTCCTTCCTTCCGAGGAACCCTATGTGGTG
CTGGAACGGCGGACGAAGAGCAGCAGCAGCAGTACCAGCGGCAGCAGTAG
CAGCACCAGCAATGGAAAGGAGTCTCATTTCGTCAAGATTTATCGTTTTT
CTTCCCGCGACGACGAGCAACGCCTGGCGAGCCTGAGGAAGGAGGAGGCA
GGGAAGGAGAGAGGGGGAATGCAACAATTGATTGTAGATTTGTGCCGGCA
GTTCTACGAGTTGGGATGGGTAACAGGCACTGGGGGAAGCATTAGCATTC
GGCATGGGAACCGGGTGTACATGACACCGTCGGGTGTGCAGAAAGAGCGG
ATCTTGCCCGAGGAGCTGTATGTGCTCGATATGAGGTAAGAATGTGCATT
CATTGATTGATTTATTATATTCAATAATTGAGTGTACTCATTCACCTATG
AATTTATTCATTCGATATCTTCTGTTTGTCATTCCCCCCCCCCTCCATCC
AAGTCCATACCTATACACTCACTGCCCACACACATTCCACACCCTACACC
TTCACATCCCACAGCGGAAACCAGCTCTATGCGCCCCCTGAATCCAAGCC
CGGTCGAGCTCGTCTGAAGCTCACGGCATGCGCCCCTCTTTTCTTCCACT
CCTACCGTATACGCAATGCTGGTAAGCCCATTTTCCTTAAATTTTTGAGT
TAGGAAGGATGGAAGGAAGGGAGAGGGAGGAAGGAGAGGGGGCGTATACT
TCTTGAAATCCCTTTGCCAGATGCCTGCAATTTACAAAAAGAGAAAGATA
AAGGAATAGAGAGGATTAGAAAGGAAGACGACGATACGCAAATGATGACA
ATCCGTGAAGCCCGAGTCATTCTTCCCATGCTGGGGTCTCTTCAGACTAC
AATTCCCTGATTCGTGTCGTCGTCCTTCCCTCCCTCCCTCCCTCCCTTCT
TCCTTCTTTCCTCTTCGAGGTGCTCTCAGTGAAATCCACACGAGAACGAC
CGAAGTTATCCTGGACGAGCACGACACCCACTCAACCCTATTTCCCTCCC
TCCCCCCCTCATTCCGTCCTTCCCCCGTAGGTGCCGTTATCCACTCCCAT
GGCATGGACTGTGTCCTGGCCACCCTTCTCCAAGGCGAGCATGCCACTGA
ATTCCGCATGACACACCAAGAAATGATTAAGGGTATTGCTGGGCACGGGT
ACCGCTCTACCCTCGTTATTCCCATCATTGAAAACACCCCCCATGAGGCG
GACCTCGCCGACTCTCTTGGAGAAGCCATCAGAAAATACCCGGAAGCGAC
TGCTGTCTTGGTGCGAAGGCACGGCATTTATATCTGGGGCTCGACCTGGA
TGCAAGCCAAAACCCAAGCAGAGTGTTATCATTATTTGTTTAGATTAGCA
GTAGAGATGCATCGACTCGGACTTGATTACACGACCCCTCCTGCTCTTTC
TTGTGGGAACGATGATGGTGTACAATCTCTCCCATTTTCGTCGCGGGAAT
TGTTTCCAAGTCGTGAGAGGGAGGCAAAGGAGGCGAGCGCGGGGATGGGG
TGTTGCAGCGGAGGAGGAGGAGGAGGGGAGGGTGGGATAATGGTGAACGA
CCACTGTCTTCACTGTACAAGTCAAGTGAAGGAGGGAGGGAGGGCGGGAG
GGAGGGCGGGAGGGAGGGCGATCAAGCACGTGTTGATGGACATTGAAGGG
ACAACAACATCCATTTCGTTTGTGCATGACACCTTGTTCCCCTACGCCAA
GTCCGCTGTAGGTGCGCATGTCCGAGAAAAATTATTGCAAAAGGATCCTG
AAATGTTACTGGACCTTGCCGCATTGCGGGTGCAAGCCATGGTGGACTCG
CAGGGGGAGGGAGGGACGGAGGTGCCAATGATTCCAGAAGGGGATGAAAC
CGCGGAAGGGACTGAGAAGGTAGTCGAGGCGGTAGTCCGAAATGTCGAGT
GGCAGATGGGGAAGGATAGGAAGACGACGGCCTTGAAGCAGCTGCAGGGG
CACATCTGGAGGGCGGGGTATGAAAAGGGAGAAATTCTTTCTCATGTCTA
CGAGGATGTCCCTGAGGCGTTGCGGCGGTGGTCGCGAGGGAAGGGAGGAA
GGGATGGAGGGATGGCGGGATTCAAGTTGGCGATGTATTCCAGTGGTTCG
AGGGAGGCGCAACGGCTTTTGCTCGGGTACACGGCCATAGGAGGGGATTT
GAGGGAGTACCTGAATTGTTACTTTGATACGACGGTGGGGGGGAAGAGGG
AGGAGAGGAGTTACAGGGAGATTGGACTATCGCTGGGTGTGGGGGGGATG
GAGGAGGTTTTGTTTTTGACGGATGTAGTAGAAGAGGCGGTGGCGGCACG
GAAGGCAGGCATGAGGGTCTTGTTGAGTGTAAGGCCTGGGAATGCGCCGA
TTGATGAAGAGTTGGGCAAGGGGTTCGCCAGAGTGTCTTCTTTTTCGGAA
GTGGATGACTACTTGGAGGGAATGAAAGAGTTTCCTTCTTTGTAAGGGAA
AAGGAAAGAGTTATGGAGTGAGAGAGAGGAGGGGGGAATTAGGGCGAGAG
TATGTCTATCATCAAGGAAAAAGGCAAGGATATTAGG back to topCoding sequence (CDS) from alignment at chr21:256978..260164+ >NO21G00760.1 ID=NO21G00760.1|Name=NO21G00760.1|organism=Nannochloropsis oceanica|type=CDS|length=2238bp|location=Sequence derived from alignment at chr21:256978..260164+ (Nannochloropsis oceanica) ATGCGGGCGTGGTTCCTGAGCGATCCCGAACAAGAATGCACGGCTGCCAT CTTACAGGAGTTGGGAGCATGCGTGGGGCCAGCAAAAGAGGCTTTGGCCA CGACGGGGATGGAGGCAGTGGTGGGGGAAACAATGGAATTGAGTGAGGAG CACCTTGGCGCGGCGTTTGCGGAGACGGTGAAGGAACTCGGCCGCGAGCA CTGTCTCCAAGACAGCAACGGACAAGAGTACTTTTCTCTCTCCGACGGGC GTGTGTACATTGATGTCCGCGATAGTGCTGATGCTTGGATCCGCATTGCC TTAAGTAAGAAAGATGCCTTGATCTTGCCTAATGGTATGTGGCGTCGTCT TGTCCTTCCTTCCGAGGAACCCTATGTGGTGCTGGAACGGCGGACGAAGA GCAGCAGCAGCAGTACCAGCGGCAGCAGTAGCAGCACCAGCAATGGAAAG GAGTCTCATTTCGTCAAGATTTATCGTTTTTCTTCCCGCGACGACGAGCA ACGCCTGGCGAGCCTGAGGAAGGAGGAGGCAGGGAAGGAGAGAGGGGGAA TGCAACAATTGATTGTAGATTTGTGCCGGCAGTTCTACGAGTTGGGATGG GTAACAGGCACTGGGGGAAGCATTAGCATTCGGCATGGGAACCGGGTGTA CATGACACCGTCGGGTGTGCAGAAAGAGCGGATCTTGCCCGAGGAGCTGT ATGTGCTCGATATGAGCGGAAACCAGCTCTATGCGCCCCCTGAATCCAAG CCCGGTCGAGCTCGTCTGAAGCTCACGGCATGCGCCCCTCTTTTCTTCCA CTCCTACCGTATACGCAATGCTGGTGCCGTTATCCACTCCCATGGCATGG ACTGTGTCCTGGCCACCCTTCTCCAAGGCGAGCATGCCACTGAATTCCGC ATGACACACCAAGAAATGATTAAGGGTATTGCTGGGCACGGGTACCGCTC TACCCTCGTTATTCCCATCATTGAAAACACCCCCCATGAGGCGGACCTCG CCGACTCTCTTGGAGAAGCCATCAGAAAATACCCGGAAGCGACTGCTGTC TTGGTGCGAAGGCACGGCATTTATATCTGGGGCTCGACCTGGATGCAAGC CAAAACCCAAGCAGAGTGTTATCATTATTTGTTTAGATTAGCAGTAGAGA TGCATCGACTCGGACTTGATTACACGACCCCTCCTGCTCTTTCTTGTGGG AACGATGATGGTGTACAATCTCTCCCATTTTCGTCGCGGGAATTGTTTCC AAGTCGTGAGAGGGAGGCAAAGGAGGCGAGCGCGGGGATGGGGTGTTGCA GCGGAGGAGGAGGAGGAGGGGAGGGTGGGATAATGGTGAACGACCACTGT CTTCACTGTACAAGTCAAGTGAAGGAGGGAGGGAGGGCGGGAGGGAGGGC GGGAGGGAGGGCGATCAAGCACGTGTTGATGGACATTGAAGGGACAACAA CATCCATTTCGTTTGTGCATGACACCTTGTTCCCCTACGCCAAGTCCGCT GTAGGTGCGCATGTCCGAGAAAAATTATTGCAAAAGGATCCTGAAATGTT ACTGGACCTTGCCGCATTGCGGGTGCAAGCCATGGTGGACTCGCAGGGGG AGGGAGGGACGGAGGTGCCAATGATTCCAGAAGGGGATGAAACCGCGGAA GGGACTGAGAAGGTAGTCGAGGCGGTAGTCCGAAATGTCGAGTGGCAGAT GGGGAAGGATAGGAAGACGACGGCCTTGAAGCAGCTGCAGGGGCACATCT GGAGGGCGGGGTATGAAAAGGGAGAAATTCTTTCTCATGTCTACGAGGAT GTCCCTGAGGCGTTGCGGCGGTGGTCGCGAGGGAAGGGAGGAAGGGATGG AGGGATGGCGGGATTCAAGTTGGCGATGTATTCCAGTGGTTCGAGGGAGG CGCAACGGCTTTTGCTCGGGTACACGGCCATAGGAGGGGATTTGAGGGAG TACCTGAATTGTTACTTTGATACGACGGTGGGGGGGAAGAGGGAGGAGAG GAGTTACAGGGAGATTGGACTATCGCTGGGTGTGGGGGGGATGGAGGAGG TTTTGTTTTTGACGGATGTAGTAGAAGAGGCGGTGGCGGCACGGAAGGCA GGCATGAGGGTCTTGTTGAGTGTAAGGCCTGGGAATGCGCCGATTGATGA AGAGTTGGGCAAGGGGTTCGCCAGAGTGTCTTCTTTTTCGGAAGTGGATG ACTACTTGGAGGGAATGAAAGAGTTTCCTTCTTTGTAA back to top
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