NO21G00590.3, NO21G00590.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G00590.3
Unique Name	NO21G00590.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2728
Alignment location	chr21:206052..211340 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:206052..211340 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G00590.3 vs.
Match: XP_002289243.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335]; EED92780.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 102.1 bits (253), Expect = 8.200e-18
Identity = 104/318 (32.70%), Postives = 148/318 (46.54%), Query Frame = 0

Query:  416 SSSSSCSQKIRETA---RRSPFRSSSSSSPSSCPPSATARPKCASASSFSSSSSSTTPSSSSKHHSTTPAAAPAGCTPTASRRITTKRQATGSEDALEVLQDTLARGLNDRSKLKYCP-----LPPFESRPQV---WVNSYVDYTSKYGLGFLHNDGSAGAYFNDSTKLVVDAQGLRARYIERSSSSSSSGGSPPPPRSSVISSSRSILPSSTKKSHSSSTSVPTCWSSGNAVRGKKGGREEGAGGEEEEAGEEERKELVYVRRWLQTKHAVMFRLSSGVIQFLFQDRTELLLSNEGRLITYANANGEREMHSISSLA 723
            SS      K+R T    R  PF   S   PSS P S T      S   F               H+  P +A       AS   TT ++  G+   LE L + L   ++ +             P F     V   WV  YVDYTSKYGLGFL NDG +G YFNDSTK V+ +   +  Y+ER       G + P     V + + +  P S+ K   +       + +    R ++ G  E   G  EE  +     +VY+++W++TKHA++FRLS+G +Q LF D TE+L+S+EG+LIT+ +    R +HSI  +A
Sbjct:  243 SSMLQTDPKLRPTLGELRGHPF--FSQRIPSSLPSSVTISEPIWSTDEFGEI------------HAIKPTSALDIIVSKASSSETTTKKTVGN--TLEKLDNVLPTKISTKLPTPITAGSSSTTPKFNIYDDVTTKWVTRYVDYTSKYGLGFLLNDGCSGVYFNDSTKAVISSSDDKFVYVER----RKEGNTEP-----VANYTLTDYPESSLKKKVTLLQHFRSYLAEQQKRAEETGESEPLTGTFEERQDSSDAPMVYMKKWIRTKHAMLFRLSNGTVQVLFYDLTEVLISSEGKLITFVDKEKNRFVHSIEDIA 535

The following BLAST results are available for this feature:

BLAST of NO21G00590.3 vs.

BLAST of NO21G00590.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_002289243.1	8.200e-18	32.70	predicted protein, partial [Thalassiosira pseudona...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00590	NO21G00590	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00590.3	NO21G00590.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00590.3.cds1	NO21G00590.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds2	NO21G00590.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds3	NO21G00590.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds4	NO21G00590.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds5	NO21G00590.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds6	NO21G00590.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds7	NO21G00590.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds8	NO21G00590.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds9	NO21G00590.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds10	NO21G00590.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds11	NO21G00590.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds12	NO21G00590.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds13	NO21G00590.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00590.3.cds14	NO21G00590.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:206052..211340+
coding sequence from alignment at chr21:206052..211340+

mRNA sequence

>NO21G00590.3 ID=NO21G00590.3|Name=NO21G00590.3|organism=Nannochloropsis oceanica|type=mRNA|length=2728bp
CCTCCCTCCCTCCCTCGGTCCCTTCCACGGTACCTCCCCCATCTCCACGC
CTGCCTTCCTCCCTTTGCCTCCCTTCCTCCCCTTGCCTCCCTCTCTCATT
CCTTCCCAAGTCGACTCCTGGAGTTGGAGTGTCAATACTCACCCTCCCTC
CCTCCTTTCCTCTCTCCTCCTCCCTTCACACCTACAGGAAATTTTGGAGA
GCACCACAGGGCACTCGTTTCAGGTGGACATATGGAGCCTGGGAGTGATC
GCTTATACCCTCCTCGTCGGCCGCCCGCCATACGAATGCAAGGATGTCAA
GTCTACCTACCAACGCATCCTGGCCAACCGTTACACTTTCCCAGAAACGG
TTTCCGTTTCTGAACCCGCAAAAGAACTCATCCGCTCGATGCTGCAGAGC
AAGCCCGAGCATCGTCCCTCTCTGGAGGCTTTGGGTAGCATGCCTTTCCT
TGCTCAAGTGAAGGATGTCGTCCCTTCTTCCCTCCCTTCCTCCTGCCTCC
TTGCCCCTCCCCCCGACGGAACGGACTGGCTTCGTCTCGCCCGCCTGGGA
TGCCTCTCCTCCTCGCCCTCCACCTCCTCCTCATCATCATCACGCAAACA
CACGGCGGCCAAGTCGTCCAGTTCAACAGAAACATCAGCAGCAGCAGCAG
CAGCAGTACGACAAACATCTCTCTCATCATCAGCAGCAGCACGGCGAGGC
GGCGGCAGAAGTCGAGCCCCCATCATCCTATACCATGATCCTGAGGAAGA
GGGGGAGGACTGGAATGGGGAAGGGGAGAAGGAGAACCAACCACCACTCA
ACACTGCGGCTACCAAACCACCACCTTCTTCCTCCTCCTCATCACTCAAA
CACAAAGCCCCCCTCCCTCCTACCCGGCGGGCCTTGGCCTCTCGCAACGT
CAACGTACTCTATTCTACCAGCACCCGCACCACTGCTACTGCTGCTGTTA
CTGCTGCTGCTGCTACTGCTACTGCTGCTGTGGCTGCCAGTCTCAAAAAG
AAGCAGCTTTCCTACTCTTCATCCTCCACGCCGGCGTACGCGGCCGGCTG
TGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGTAGCCA
GCTTAAACACGGCACCAGCAGCACAGAGAAGGAGAGAGGTCATCTTTGAC
ACTCCCCCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCGTCCTGTTCCTCGCCCCCATCGTCACCACCCC
CCTCTGCTTGTGCTGCTGCTGAGAAAAGTGTTTGTCGTACTGCTACTGTT
ACTGTTTGTAAAACGGCAGCGGCATCAGCGCGAGCCTTCTCTCCTCAGCA
CACGCGGAGGCACACGGAAAAGGAAGGGGACGTGACACCCATCTCCTCAC
GACTCCCAACACAAGCAAAATTAACCACAGCCAGCACAACAGCAGCAGCA
GCAGCAGCAAGAGAAGAAGATAACACCCAACCCCTCCCTCTCCCTCCACG
CATTGCCAGAAAATCAGCCAGAGCCGTCGTACCTTCCCTCCCTCCCTCCT
CGCCCCGTCGCCTCTCTTCCTCCCCAGCTACTGCAGCTGTTGTAGTGGTT
CGGACCTCCTCCTCTCCCTCCCACCTGTCCTCCTCCTCCTCCTCCTCTTG
CAGCCAGAAAATAAGAGAGACTGCCCGCCGCTCCCCCTTCCGCTCCTCCT
CTTCGTCCTCCCCCTCTTCCTGCCCCCCCTCAGCCACCGCTCGTCCGAAA
TGTGCCTCGGCTTCTTCCTTCTCCTCCTCCTCTTCTTCCACTACTCCCTC
CTCCTCCTCTAAGCACCATTCTACTACTCCGGCTGCTGCTCCTGCTGGAT
GCACTCCCACGGCATCAAGACGGATAACAACGAAGAGACAAGCCACGGGC
AGCGAAGATGCCCTGGAGGTCCTTCAAGACACCCTGGCCCGTGGCCTCAA
TGACAGGTCGAAATTGAAGTATTGTCCGTTGCCGCCTTTTGAGTCGCGGC
CACAGGTGTGGGTGAATTCTTACGTCGACTACACGAGCAAGTACGGCCTG
GGATTCCTCCACAACGACGGAAGTGCCGGAGCATACTTCAACGACTCGAC
GAAGCTGGTGGTGGACGCCCAGGGTCTCCGGGCCCGTTACATCGAACGGT
CGTCGTCGTCATCATCGAGTGGAGGAAGCCCTCCCCCCCCCCGATCGAGC
GTCATTTCCTCCTCGAGATCTATCCTCCCGAGCTCTACAAAAAAGTCTCA
CTCGTCAAGCACTTCCGTTCCTACCTGTTGGAGCAGCGGGAACGCAGTGC
GAGGGAAGAAGGGCGGGAGGGAGGAAGGGGCGGGGGGCGAGGAGGAGGAG
GCGGGAGAGGAAGAAAGGAAGGAGTTGGTGTATGTCCGCCGATGGCTGCA
GACAAAGCACGCTGTGATGTTCCGGCTTTCTTCCGGGGTGATTCAATTCC
TCTTCCAAGATCGGACTGAGCTCCTCCTGTCCAACGAAGGCCGCCTCATC
ACCTATGCAAACGCCAACGGAGAACGAGAGATGCATTCCATTTCGTCTCT
CGCCAAGCTGGAAGCGAGGGAGGGAGGGATTGAGGAGGGGGTGGAGGTCT
CCGAGGAAGAGCAGCAGAGCGCGAGGCATTTGATGAAGAGGTTAAGAAAA
AGAAGGAATAGCAGCGGTGGAAAAGTAGTTGTACTTACCAGCAGCAGCAG
AAGCAGCAGCAGCAGCAGCTGGTGGTAA

protein sequence of NO21G00590.3

>NO21G00590.3-protein ID=NO21G00590.3-protein|Name=NO21G00590.3|organism=Nannochloropsis oceanica|type=polypeptide|length=780bp
MLQSKPEHRPSLEALGSMPFLAQVKDVVPSSLPSSCLLAPPPDGTDWLRL
ARLGCLSSSPSTSSSSSSRKHTAAKSSSSTETSAAAAAAVRQTSLSSSAA
ARRGGGRSRAPIILYHDPEEEGEDWNGEGEKENQPPLNTAATKPPPSSSS
SSLKHKAPLPPTRRALASRNVNVLYSTSTRTTATAAVTAAAATATAAVAA
SLKKKQLSYSSSSTPAYAAGCGSSSSSSSSSSSSRVASLNTAPAAQRRRE
VIFDTPPSSSFSSSSSSSSSSSSSSSSSCSSPPSSPPPSACAAAEKSVCR
TATVTVCKTAAASARAFSPQHTRRHTEKEGDVTPISSRLPTQAKLTTAST
TAAAAAAREEDNTQPLPLPPRIARKSARAVVPSLPPSSPRRLSSSPATAA
VVVVRTSSSPSHLSSSSSSSCSQKIRETARRSPFRSSSSSSPSSCPPSAT
ARPKCASASSFSSSSSSTTPSSSSKHHSTTPAAAPAGCTPTASRRITTKR
QATGSEDALEVLQDTLARGLNDRSKLKYCPLPPFESRPQVWVNSYVDYTS
KYGLGFLHNDGSAGAYFNDSTKLVVDAQGLRARYIERSSSSSSSGGSPPP
PRSSVISSSRSILPSSTKKSHSSSTSVPTCWSSGNAVRGKKGGREEGAGG
EEEEAGEEERKELVYVRRWLQTKHAVMFRLSSGVIQFLFQDRTELLLSNE
GRLITYANANGEREMHSISSLAKLEAREGGIEEGVEVSEEEQQSARHLMK
RLRKRRNSSGGKVVVLTSSSRSSSSSSWW*

mRNA from alignment at chr21:206052..211340+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G00590.3 ID=NO21G00590.3|Name=NO21G00590.3|organism=Nannochloropsis oceanica|type=mRNA|length=5289bp|location=Sequence derived from alignment at chr21:206052..211340+ (Nannochloropsis oceanica)
CCTCCCTCCCTCCCTCGGTCCCTTCCACGGTACCTCCCCCATCTCCACGC
CTGCCTTCCTCCCTTTGCCTCCCTTCCTCCCCTTGCCTCCCTCTCTCATT
CCTTCCCAAGTCGACTCCTGGAGTTGGAGTGTCAATACTCACCCTCCCTC
CCTCCTTTCCTCTCTCCTCCTCCCTTCACACCTACAGGAAATTTTGGAGA
GCACCACAGGGCACTCGTTTCAGGTGGACATATGGAGCCTGGGAGTGATC
GCTTATACCCTCCTCGTCGGCCGCCCGCCATACGAATGCAAGGATGTCAA
GGTAGGTCAATTCCCTTACGTCGTTTCCTCCCTCCCTCCCTCCCCCCCTC
CCTCCCTCCTTTGTTGGTCCTCTTTTCGTCCACTCTCGATCTTCCAATCT
CTTTCCCCCTCTCTCTCTTTCCCTCTCTCTCTCCCTCTCTCTCCCTCCCT
CTCTCTCTCCCTCTCTCTCTTCCTCTCTCTCTCCCTCTCTTTCTTTCTCT
CTCTCTTTTCATTTCTACCTCGCACAAACACACCCCATTTACTTTCTCCC
TTCCTCCCCTTCAGTCTACCTACCAACGCATCCTGGCCAACCGTTACACT
TTCCCAGAAACGGTTTCCGTTTCTGAACCCGCAAAAGAACTCATCCGCTC
GATGCTGCAGGTAGGTAGGGAGAGGAGGGGAGAGGGGAAGGGGGGGAGGG
AAGGATGAAAAGAAGAGAAATCGATCGTAGCAATGTCGGTGGGTCGATCG
CGGTGAAGGGATGGAGGAATGGAGAGAGGGAAAGCAAGGTGGGCAATCAA
TTTCCTTATATGTATATATGTATATATTGTCATCATTCTTATAAATTACT
TATTTGGGATCACTATTATAGGCTTAGGGTTATTCTTTCACTTATTTGGG
ATCCTTATAATGATTACGAAATTACTTGTTTGGGGTCACAATAACGATTA
CTCAATCACTTATTTGGGATCACTATAATGACTGCTTGATTACTTGTTTG
GGATAATTTAAATGATTACTCACCAAACAACAGAGCAAGCCCGAGCATCG
TCCCTCTCTGGAGGCTTTGGGTAGCATGCCTTTCCTTGCTCAAGTACGTG
CGCGTTCTTCCCCCCCTCCCTCCCTCCCTCCCCCCTCCTTCCTTCCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAATCTAAATATCTCTCT
TCTCTCATGTATGCTTAGGTGAAGGATGTCGTCCCTTCTTCCCTCCCTTC
CTCCTGCCTCCTTGCCCCTCCCCCCGACGGAACGGACTGGCTTCGTCTCG
CCCGCCTGGGATGCCTCTCCTCCTCGCCCTCCACCTCCTCCTCATCATCA
TCACGGTTCGTCTCCCTCCCTCCATTCCTCCTTCACTCATCCAATTTCCT
CTCTTATTCATCCTTTTCTCCCAATCCCCCCTTTCCCCCCTCTCTCCCTC
CCTCCCTCCCCCTCTAGCAAACACACGGCGGCCAAGTCGTCCAGTTCAAC
AGAAACATCAGCAGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCAT
CATCAGCAGCAGCACGGCGAGGCGGCGGCAGAAGTCGAGCCCCCATCATC
CTATACCATGATCCTGAGGAAGAGGGGGAGGACTGGAATGGGGAAGGGGA
GAAGGAGAACCAACCACCACTCAACACTGCGGCTACCAAACCACCACCTT
CTTCCTCCTCCTCATCACTCAAACACAAAGGTACTTTAACAAGCGCCGGT
ATCCCCATCCTCAACCCTGATACCATCACTCACCCTGATTCAAACACACT
CATATATTTCATCTTTCATTTTTCCATTTATCCCCTAATCCCCCTCCCCT
CCTCTCCCCCTCCCTTCCTCTAGCCCCCCTCCCTCCTACCCGGCGGGCCT
TGGCCTCTCGCAACGTCAACGTACTCTATTCTACCAGCACCCGCACCACT
GCTACTGCTGCTGTTACTGCTGCTGCTGCTACTGCTACTGCTGCTGTGGC
TGCCAGTCTCAAAAAGAAGCAGCTTTCCTACTCTTCATCCTCCACGCCGG
CGTACGCGGCCGGCTGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGGGTAGCCAGCTTAAACACGGCACCAGCAGCACAGAGAAGGAG
AGAGGTCATCTTTGACACTCCCCCCTCCTCCTCCTTCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTGTTCCTCGCCC
CCATCGTCACCACCCCCCTCTGCTTGTGCTGCTGCTGAGAAAAGTGTTTG
TCGTACTGCTACTGTTACTGTTTGTAAAACGGCAGCGGCATCAGCGCGAG
CCTTCTCTCCTCAGCACACGCGGAGGCACACGGAAAAGGAAGGGGACGTG
ACACCCATCTCCTCACGACTCCCAACACAAGCAAAATTAACCACAGCCAG
CACAACAGCAGCAGCAGCAGCAGCAAGAGAAGAAGATAACACCCAACCCC
TCCCTCTCCCTCCACGCATTGCCAGAAAATCAGCCAGAGCCGTCGTACCT
TCCCTCCCTCCCTCCTCGCCCCGTCGCCTCTCTTCCTCCCCAGCTACTGC
AGCTGTTGTAGTGGTTCGGACCTCCTCCTCTCCCTCCCACCTGTCCTCCT
CCTCCTCCTCCTCTTGCAGCCAGAAAATAAGAGAGACTGCCCGCCGCTCC
CCCTTCCGCTCCTCCTCTTCGTCCTCCCCCTCTTCCTGCCCCCCCTCAGC
CACCGCTCGTCCGAAATGTGCCTCGGCTTCTTCCTTCTCCTCCTCCTCTT
CTTCCACTACTCCCTCCTCCTCCTCTAAGCACCATTCTACTACTCCGGCT
GCTGCTCCTGCTGGATGCACTCCCACGGCATCAAGACGGATAACAACGAA
GAGACAAGGTAAGGAAAGACAGCCGATGTGGAGGAGGAGGGGGAGGAGGA
GGGAGGAGAAAAAGAAAGACGAGAAGAAGGTAAAAGCATGGACGACTCGC
AATCAAGGCCATAATTTTTCCTTATGTACGCTCTCAACCCATTCCACTCC
GGTCCCATCCTCCGTCCCTCCGTCCCTCCCCCTCATCCAGCCACGGGCAG
CGAAGATGCCCTGGAGGTCCTTCAAGACACCCTGGCCCGTGGCCTCAATG
ACAGGTCGAAATTGAAGTATTGTCCGTTGCCGCCTTTTGAGTCGCGGCCA
CAGGTAGGGAGGGAAGGCAGGTGTAAGAGAAGGAAGGGGGGTGGTAGAAT
AAAATGTCTACGCACACAAATCAATCGGCCTTCTCAGTTCCACCTTCCTT
CCCTCCCTCCCTCCTTCCCTCCCTACCTTGTCTAGGTGTGGGTGAATTCT
TACGTCGACTACACGAGCAAGTACGGCCTGGGATTCCTCCACAACGACGG
AAGGTACCTCCTTCCCTCCCCCCACCCCTTTTTTTACGTTAAATCTCATC
GTTTCTCGCCTTTATACCCTCCCTCAAACCAACCCCCCCTTTTTCCATCT
TCATCCTCTCACCTCATCGCTTTCCTCCTCCCTCCCTCCCCCAGTGCCGG
AGCATACTTCAACGACTCGACGAAGCTGGTGGTGGACGCCCAGGGTCTCC
GGGCCCGTTACATCGAACGGTCGTCGTCGTCATCATCGAGTGGAGGAAGG
TAAGGACCAAGGGAGAGAAGGACAGACAATTTGCTTGTCTTGTTACGACT
AATGTGCGGGAGAAACCACTCACAATGTCGTCCACCATTCCCTTTCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGCTCTTCCTCCCTG
CCTCAGCCCTCCCCCCCCCCGATCGAGCGTCATTTCCTCCTCGAGATCTA
TCCTCCCGAGCTCTACAAAAAAGTCTCACTCGTCAAGCACTTCCGTTCCT
ACCTGGTGAGGAGGGGAAAAGGGAGGGAGGCAGGCAGGGAGGGGGGGGAA
AGTGATGGATACGATGATCCATACAACAGTGCAGATTCTCACGTTTTTCA
TTCACTTCCTCTCTCCCTCCCTCCCCCCCTCCCCCCTTCCTCAGTTGGAG
CAGCGGGAACGCAGTGCGTCATCCAAGGTCAAAGTCTCTCCCTCCCCTCC
CTCCCTCCCTCCCTCCTCGCGGCGATGCAAATCCACCACGCTCAAAGGAG
GGAAGAAGGGCGGGAGGGAGGAAGGGGCGGGGGGCGAGGAGGAGGAGGCG
GGAGAGGAAGAAAGGAAGGAGTTGGTGTATGTCCGCCGATGGCTGCAGAC
AAAGCACGCTGTGATGTTCCGGCTTTCTTCCGGGTAAGGAGGGGGGGAAG
GAGGGAGGGGAAGAGGGAGAGAGAGGAAGAGGGAGGGAGGGGAAGAGGGA
GGGAGGGAGGAGGTCAATCTTTCTTGCCGTCTATACATCAATGCCTCAAC
CTCCGTTTTCCTCGTTTTTGGTCGTCTTATCCCACGCTCTTTTAAATTAC
AATCACCTAATCATATCACTCAATTACAATCACCTAAACAACACATACAA
TCACCCACAGGGTGATTCAATTCCTCTTCCAAGATCGGACTGAGCTCCTC
CTGTCCAACGAAGGCCGCCTCATCACGTACGCATCCCCCCCCTCTTCCTT
TCCTCTATTTCCTTTCTTCCCGTCCTCTCCTCCCTTTTTCCATCGGCACA
TCTATCGTTCTCACCTTTCTTCCCTTCCCTCCTTCCCTCCCTCCCTCCCT
CCCTTTCCCTTCTTCCCATCCTCCCTCCCTTCCACCCTCCAGCTATGCAA
ACGCCAACGGAGAACGAGAGATGCATTCCATTTCGTCTCTCGCCAAGCTG
GAAGCGAGGGAGGGAGGGATTGAGGAGGGGGTGGAGGTCTCCGAGGAAGA
GCAGCAGAGCGCGAGGCATTTGATGAAGAGGTTAAGGTATGCCAATGAAG
TGCTAAAGAAGGTTTTGGATAGGAGGCAGGTACAGGGAGGGAGGGAGGGA
GAAAGGGAGGGAGGGAGGGTTTAGGAGAAAGAAGGTGGGCTGGTGATAGT
AGGATTATATGAGACGTAGATATATTTATTTTACGTGGGTAGGCATCCAT
AGATTAATTTATTTATTCGTGTGACTTTTGTCTGTCTGTAGGGGTAGGGG
CGTTGTGGAGGAGAATGAATGAGGTGGAGGAGGAAGAATAGGGGGAGGAA
GGAGATTTTAAAAGATGGCCAGTGGTAGAAAGTATAGAATTACATCCCCC
GTAAAAGAAAAAGAAGGAATAGCAGCGGTGGAAAAGTAGTTGTACTTACC
AGCAGCAGCAGAAGCAGCAGCAGCAGCAGCTGGTGGTAA

Coding sequence (CDS) from alignment at chr21:206052..211340+

>NO21G00590.3 ID=NO21G00590.3|Name=NO21G00590.3|organism=Nannochloropsis oceanica|type=CDS|length=2340bp|location=Sequence derived from alignment at chr21:206052..211340+ (Nannochloropsis oceanica)
ATGCTGCAGAGCAAGCCCGAGCATCGTCCCTCTCTGGAGGCTTTGGGTAG
CATGCCTTTCCTTGCTCAAGTGAAGGATGTCGTCCCTTCTTCCCTCCCTT
CCTCCTGCCTCCTTGCCCCTCCCCCCGACGGAACGGACTGGCTTCGTCTC
GCCCGCCTGGGATGCCTCTCCTCCTCGCCCTCCACCTCCTCCTCATCATC
ATCACGCAAACACACGGCGGCCAAGTCGTCCAGTTCAACAGAAACATCAG
CAGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCAGCAGCA
GCACGGCGAGGCGGCGGCAGAAGTCGAGCCCCCATCATCCTATACCATGA
TCCTGAGGAAGAGGGGGAGGACTGGAATGGGGAAGGGGAGAAGGAGAACC
AACCACCACTCAACACTGCGGCTACCAAACCACCACCTTCTTCCTCCTCC
TCATCACTCAAACACAAAGCCCCCCTCCCTCCTACCCGGCGGGCCTTGGC
CTCTCGCAACGTCAACGTACTCTATTCTACCAGCACCCGCACCACTGCTA
CTGCTGCTGTTACTGCTGCTGCTGCTACTGCTACTGCTGCTGTGGCTGCC
AGTCTCAAAAAGAAGCAGCTTTCCTACTCTTCATCCTCCACGCCGGCGTA
CGCGGCCGGCTGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGGGTAGCCAGCTTAAACACGGCACCAGCAGCACAGAGAAGGAGAGAG
GTCATCTTTGACACTCCCCCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTGTTCCTCGCCCCCAT
CGTCACCACCCCCCTCTGCTTGTGCTGCTGCTGAGAAAAGTGTTTGTCGT
ACTGCTACTGTTACTGTTTGTAAAACGGCAGCGGCATCAGCGCGAGCCTT
CTCTCCTCAGCACACGCGGAGGCACACGGAAAAGGAAGGGGACGTGACAC
CCATCTCCTCACGACTCCCAACACAAGCAAAATTAACCACAGCCAGCACA
ACAGCAGCAGCAGCAGCAGCAAGAGAAGAAGATAACACCCAACCCCTCCC
TCTCCCTCCACGCATTGCCAGAAAATCAGCCAGAGCCGTCGTACCTTCCC
TCCCTCCCTCCTCGCCCCGTCGCCTCTCTTCCTCCCCAGCTACTGCAGCT
GTTGTAGTGGTTCGGACCTCCTCCTCTCCCTCCCACCTGTCCTCCTCCTC
CTCCTCCTCTTGCAGCCAGAAAATAAGAGAGACTGCCCGCCGCTCCCCCT
TCCGCTCCTCCTCTTCGTCCTCCCCCTCTTCCTGCCCCCCCTCAGCCACC
GCTCGTCCGAAATGTGCCTCGGCTTCTTCCTTCTCCTCCTCCTCTTCTTC
CACTACTCCCTCCTCCTCCTCTAAGCACCATTCTACTACTCCGGCTGCTG
CTCCTGCTGGATGCACTCCCACGGCATCAAGACGGATAACAACGAAGAGA
CAAGCCACGGGCAGCGAAGATGCCCTGGAGGTCCTTCAAGACACCCTGGC
CCGTGGCCTCAATGACAGGTCGAAATTGAAGTATTGTCCGTTGCCGCCTT
TTGAGTCGCGGCCACAGGTGTGGGTGAATTCTTACGTCGACTACACGAGC
AAGTACGGCCTGGGATTCCTCCACAACGACGGAAGTGCCGGAGCATACTT
CAACGACTCGACGAAGCTGGTGGTGGACGCCCAGGGTCTCCGGGCCCGTT
ACATCGAACGGTCGTCGTCGTCATCATCGAGTGGAGGAAGCCCTCCCCCC
CCCCGATCGAGCGTCATTTCCTCCTCGAGATCTATCCTCCCGAGCTCTAC
AAAAAAGTCTCACTCGTCAAGCACTTCCGTTCCTACCTGTTGGAGCAGCG
GGAACGCAGTGCGAGGGAAGAAGGGCGGGAGGGAGGAAGGGGCGGGGGGC
GAGGAGGAGGAGGCGGGAGAGGAAGAAAGGAAGGAGTTGGTGTATGTCCG
CCGATGGCTGCAGACAAAGCACGCTGTGATGTTCCGGCTTTCTTCCGGGG
TGATTCAATTCCTCTTCCAAGATCGGACTGAGCTCCTCCTGTCCAACGAA
GGCCGCCTCATCACCTATGCAAACGCCAACGGAGAACGAGAGATGCATTC
CATTTCGTCTCTCGCCAAGCTGGAAGCGAGGGAGGGAGGGATTGAGGAGG
GGGTGGAGGTCTCCGAGGAAGAGCAGCAGAGCGCGAGGCATTTGATGAAG
AGGTTAAGAAAAAGAAGGAATAGCAGCGGTGGAAAAGTAGTTGTACTTAC
CAGCAGCAGCAGAAGCAGCAGCAGCAGCAGCTGGTGGTAA

Synonyms

Publications