NO21G00140.1, NO21G00140.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G00140.1
Unique Name	NO21G00140.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2325
Alignment location	chr21:38464..44402 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:38464..44402 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G00140.1 vs.
Match: EWM23323.1 (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana])

HSP 1 Score: 984.2 bits (2543), Expect = 2.400e-283
Identity = 502/631 (79.56%), Postives = 556/631 (88.11%), Query Frame = 0

Query:  143 MSPNGANKMGIVMQSQGVEICFHQLSLTAHYVSKKMKRKSRRILKGISGVMSKGTMTAVMGPSGCGKSSLLHTLAGKNNLSHISGHILVDGRPRDVGFNAKIGYVEQDDQLMGIMTVRENLFFSAQLRLPVSVPFIEKKERVEDTIELLGLWKCASSAIGTDMIRGVSGGERKRCSIGMELVVDPAVIFLDEPTSGLDAFTAHRVVEILADLAMAGKTVILSIHQPRYSVFKLFDKLMLLAEGEMVYQGCAMQGVDYFDSIGFKCEAFNNPCDFFLDVTCDQVRKLDRQISMGGSVHVEEMGFLARSFHNSHQGRAIAEECEAKVVASGGDVRASNPMPKHVRQYATSFCHQTMVVSKRTFLAVMRNPATSIFQILSFLASAVILGAFFYGNLDDGPNAMQAHIGAMFMVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKVFCEILPTRLVPTIFYAVITAYMAGLRTDFYHLSMYWLTLTVTSITSTSLCLLVSCATSVYSAAFLGCGAFYLLFMLASGFVLQADKIPVYLAPFKWLSFYRYCLQNLLALDLEGRVFNCFTPEEIAASGQ-VSICLPTGDLYLSSQGIDPQNVWRNIGILTAMIPCYLGMAYLFLRSLKK 773
            +SP  A     V+Q+ GVEI FHQLSLTA YVSK MKRK+RRILK ISG+  +G+ TA+MGPSGCGK+SLLHTLAGKN  S ISGHILVDG+ R+ GF+AKIGYVEQDDQLMG+M+VREN+ FSA+LRLPVS+   EK+ RVEDTIELLGLWKCA+S IGT+MIRGVSGGERKRCSI MELVVDPAVIFLDEPTSGLDAFTAH+VVEIL+DLA  GKTVILSIHQPRY+VFKLFD LMLLAEGEMVYQG A +G +YF  IGF+CE FNNP DFF+DV CDQVR+LDRQIS GGSVHV+EMGFLARSF NS +G+AI  ECEA+V+ SG  V AS  M KHVR YAT F HQ   +S+R FLAVMRNPATSIFQ+LSFLASAV+LGAFFYG LD GP AMQAHIGAMFMVAYMIIFSAITSLELFIQER+LFVHEKTSGFYRTSAYF+AKV CEILPTR+VPT+FYAV+TAYMAGLRTDFYHLS+YWLTLTVTSITSTSLCLLVSCATSVYSAAF+GCGAFY++FMLASGFVLQAD+IPVYLAPFK+LSFYRYCLQNLLALDL  RVF+C TPEE+ A    VSICLPTGDLYL SQGI+P N+W+NIGIL AM P YL +AYLFLRSLKK
Sbjct:   87 LSPQRAKSS--VLQTTGVEIAFHQLSLTATYVSKNMKRKTRRILKNISGITPRGSCTALMGPSGCGKTSLLHTLAGKNAKSKISGHILVDGKAREEGFSAKIGYVEQDDQLMGVMSVRENIQFSAELRLPVSISKNEKRCRVEDTIELLGLWKCANSKIGTEMIRGVSGGERKRCSIAMELVVDPAVIFLDEPTSGLDAFTAHKVVEILSDLASHGKTVILSIHQPRYTVFKLFDVLMLLAEGEMVYQGPAAKGAEYFAQIGFQCEPFNNPSDFFMDVVCDQVRRLDRQISYGGSVHVQEMGFLARSFKNSAEGKAINGECEARVLDSGVAVDASRRMDKHVRHYATGFLHQFRTISRRVFLAVMRNPATSIFQVLSFLASAVLLGAFFYGRLDGGPTAMQAHIGAMFMVAYMIIFSAITSLELFIQERALFVHEKTSGFYRTSAYFLAKVVCEILPTRMVPTLFYAVVTAYMAGLRTDFYHLSLYWLTLTVTSITSTSLCLLVSCATSVYSAAFMGCGAFYIVFMLASGFVLQADQIPVYLAPFKYLSFYRYCLQNLLALDLHNRVFDCPTPEELMADPTLVSICLPTGDLYLQSQGINPDNIWKNIGILAAMTPAYLFIAYLFLRSLKK 715

The following BLAST results are available for this feature:

BLAST of NO21G00140.1 vs.

BLAST of NO21G00140.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM23323.1	2.400e-283	79.56	atp-binding cassette sub-family g member 2 [Nannoc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00140	NO21G00140	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00140.1	NO21G00140.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00140.1.cds1	NO21G00140.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds2	NO21G00140.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds3	NO21G00140.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds4	NO21G00140.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds5	NO21G00140.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds6	NO21G00140.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds7	NO21G00140.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds8	NO21G00140.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds9	NO21G00140.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds10	NO21G00140.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds11	NO21G00140.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds12	NO21G00140.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds13	NO21G00140.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds14	NO21G00140.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds15	NO21G00140.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds16	NO21G00140.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds17	NO21G00140.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds18	NO21G00140.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds19	NO21G00140.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds20	NO21G00140.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00140.1.cds21	NO21G00140.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:38464..44402+
coding sequence from alignment at chr21:38464..44402+

mRNA sequence

>NO21G00140.1 ID=NO21G00140.1|Name=NO21G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2325bp
ATGGATGTTTTTTTTTTCGCCCAACCGGGACGGAAGAAGAAACTTGATAT
CAGCCGCCGTGCATCGCTTTGTTCGTCGTCGCTTTATAGCCAAAGGGCTG
AAAAACAAGCCATGCTTCCAGCCGATCCCGAGTTGACGGACAAAGCCGGC
TCGAGCCCCTCCATTCAATCGTCCTCGTCAGAGCATGCTGTTTCTGGCCT
CTGGGGTCATCGAGGGGCTCAAGTGTCGTCGAAATCGGACATTACTCTCT
TCTCCACCGCGGACGCCGAGACAAAGGATGCTAAGCACGACTACGCCGAT
GACAACAATGCTGGTAGCGGTAGTAATTTCAGCCTCGCGGAAGACTCGTC
CACGGCGCGGAGTGTGGGTTTCGCGACCGCGATCGTGGATTTGGAGGCGG
ACGGAGGGGGCAAGGACGGGGCCGCCATGTCACCAAACGGGGCAAACAAG
ATGGGTATAGTGATGCAGAGCCAAGGCGTGGAGATATGCTTCCATCAGCT
GAGTCTAACGGCGCATTACGTGAGCAAGAAGATGAAGCGCAAGAGCCGCC
GGATTCTCAAGGGCATCTCGGGCGTGATGAGCAAGGGCACCATGACGGCG
GTGATGGGCCCGTCCGGCTGCGGCAAGTCCTCCCTGCTCCACACTCTGGC
CGGTAAGAACAACTTGAGCCACATCTCGGGTCACATCCTGGTGGATGGCC
GTCCGCGAGACGTTGGATTTAACGCCAAGATCGGTTACGTTGAGCAGGAC
GACCAGCTCATGGGCATCATGACCGTCCGCGAGAATCTCTTCTTCTCTGC
CCAGCTCCGCCTGCCGGTCTCCGTGCCCTTTATAGAGAAGAAGGAGCGAG
TGGAGGACACTATCGAGCTTTTGGGTCTCTGGAAGTGTGCTTCCTCGGCC
ATAGGCACCGACATGATTCGGGGCGTCTCGGGCGGCGAGCGGAAGCGTTG
CTCGATCGGGATGGAGCTGGTTGTGGACCCGGCCGTCATTTTTCTGGATG
AGCCCACCAGCGGCCTCGACGCGTTCACTGCCCATCGGGTGGTTGAGATT
TTGGCCGACCTGGCCATGGCGGGCAAAACCGTCATCCTCTCCATCCACCA
GCCGCGGTACTCCGTCTTCAAGCTCTTCGACAAACTCATGCTCCTCGCCG
AGGGGGAGATGGTCTACCAGGGCTGTGCCATGCAGGGCGTCGATTACTTC
GACAGCATCGGCTTCAAGTGCGAAGCGTTCAACAATCCGTGTGATTTCTT
TCTTGACGTCACTTGTGACCAGGTCCGCAAGCTGGACCGTCAGATCTCGA
TGGGGGGCTCAGTGCACGTGGAGGAGATGGGCTTCCTCGCCCGCTCCTTC
CACAACAGTCACCAGGGCCGGGCCATCGCGGAGGAGTGCGAGGCCAAGGT
GGTGGCCTCGGGGGGCGATGTTAGGGCCTCGAATCCCATGCCCAAGCACG
TGCGGCAGTACGCCACGTCCTTCTGCCACCAGACCATGGTGGTCAGCAAG
CGCACATTCCTCGCGGTGATGCGCAATCCCGCCACCTCCATCTTCCAAAT
CCTCTCTTTTCTGGCCTCGGCCGTCATCCTCGGGGCCTTCTTCTACGGAA
ATCTCGATGACGGGCCCAATGCCATGCAGGCCCACATCGGTGCCATGTTT
ATGGTTGCCTACATGATCATCTTTTCCGCCATCACCTCCCTCGAGCTCTT
CATCCAGGAACGGTCTCTCTTTGTCCACGAGAAGACGAGTGGCTTCTACC
GCACCAGCGCCTACTTTATCGCCAAAGTTTTCTGCGAGATCTTGCCGACG
CGGTTGGTGCCCACGATCTTCTACGCCGTCATCACCGCCTATATGGCAGG
CCTGCGCACGGACTTCTACCACCTGTCCATGTACTGGCTCACTCTGACTG
TCACGAGCATCACCTCCACCTCCCTCTGCCTCCTCGTCTCCTGCGCCACC
TCCGTCTACTCTGCCGCCTTCCTCGGGTGTGGCGCCTTTTACCTGCTCTT
CATGCTGGCCTCGGGTTTTGTCCTTCAAGCAGACAAGATCCCTGTCTACC
TGGCCCCCTTCAAGTGGCTCTCGTTTTACCGCTACTGTTTGCAGAATCTG
TTGGCGCTGGACTTGGAGGGCCGCGTTTTCAACTGCTTTACGCCTGAGGA
GATTGCAGCGTCAGGGCAGGTGTCCATCTGCCTGCCCACCGGCGACCTAT
ACCTGAGCTCTCAGGGCATCGACCCTCAGAACGTCTGGCGAAACATCGGC
ATTTTGACAGCCATGATCCCTTGCTACCTTGGCATGGCCTACCTCTTCTT
GCGCTCGCTGAAGAAGAAGTCTTAA

protein sequence of NO21G00140.1

>NO21G00140.1-protein ID=NO21G00140.1-protein|Name=NO21G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=775bp
MDVFFFAQPGRKKKLDISRRASLCSSSLYSQRAEKQAMLPADPELTDKAG
SSPSIQSSSSEHAVSGLWGHRGAQVSSKSDITLFSTADAETKDAKHDYAD
DNNAGSGSNFSLAEDSSTARSVGFATAIVDLEADGGGKDGAAMSPNGANK
MGIVMQSQGVEICFHQLSLTAHYVSKKMKRKSRRILKGISGVMSKGTMTA
VMGPSGCGKSSLLHTLAGKNNLSHISGHILVDGRPRDVGFNAKIGYVEQD
DQLMGIMTVRENLFFSAQLRLPVSVPFIEKKERVEDTIELLGLWKCASSA
IGTDMIRGVSGGERKRCSIGMELVVDPAVIFLDEPTSGLDAFTAHRVVEI
LADLAMAGKTVILSIHQPRYSVFKLFDKLMLLAEGEMVYQGCAMQGVDYF
DSIGFKCEAFNNPCDFFLDVTCDQVRKLDRQISMGGSVHVEEMGFLARSF
HNSHQGRAIAEECEAKVVASGGDVRASNPMPKHVRQYATSFCHQTMVVSK
RTFLAVMRNPATSIFQILSFLASAVILGAFFYGNLDDGPNAMQAHIGAMF
MVAYMIIFSAITSLELFIQERSLFVHEKTSGFYRTSAYFIAKVFCEILPT
RLVPTIFYAVITAYMAGLRTDFYHLSMYWLTLTVTSITSTSLCLLVSCAT
SVYSAAFLGCGAFYLLFMLASGFVLQADKIPVYLAPFKWLSFYRYCLQNL
LALDLEGRVFNCFTPEEIAASGQVSICLPTGDLYLSSQGIDPQNVWRNIG
ILTAMIPCYLGMAYLFLRSLKKKS*

mRNA from alignment at chr21:38464..44402+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G00140.1 ID=NO21G00140.1|Name=NO21G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=5939bp|location=Sequence derived from alignment at chr21:38464..44402+ (Nannochloropsis oceanica)
ATGGATGTTTTTTTTTTCGCCCAACCGGGACGGAAGAAGAAACTTGATAT
CAGTGATTGTTGTTTCTTTAATGCTCCCACCTACGCTCAGCCCTCCCAGA
CTGGCCATGGCACATACAGCCATGCTATCGTTATGCCTTCTTGAACATCG
ACGAATTAGGATTTTATAGGCTGCGTTCGATCAAGAGCTTTTAAAGCACA
CAACGAGAAGAATTTTTTCCCCGTCGTCTACTGCTTCTGCACGTTCACCA
CGTCTACGCAACACCACTGCACATCCAGATCAAGTGCTTGATGCAGTGCG
CTCTCTTTAATCATTACTGACCATGACACCTCTTTAATATCCTTTTTTGC
CTCCCGTACATTGGGCATTATTAACCGATACAGGCCGCCGTGCATCGCTT
TGTTCGTCGTCGCTTTATAGCCAAAGGTAAGAATAAAAAACCACGCCTCC
CAAAGTGTGTGTACGCATACCCGCCCAGCTCAAATCATTGACAAGAAGCC
ACTGCATTTCATGCCAGGCCTTGTTCGGGGAGATCGGAAGAGGAGAGACT
GCTTGCTACCTCCTCCCACTTCCCCCCTCTTCCTCCGTAAGCCCACCACT
CTCTCCCCTCTTTCCCCAGGGCTGAAAAACAAGCCATGCTTCCAGCCGAT
CCCGAGTTGACGGACAAAGCCGGCTCGAGCCCCTCCATTCAATCGTCCTC
GTCAGAGCATGCTGTTTCTGGCCTCTGGGGTCATCGAGGGGCTCAAGTGT
CGTCGAAATCGGACATTACTCTCTTCTCCACCGCGGACGCCGAGACAAAG
GATGCTAAGCACGACTACGCCGATGACAACAATGCTGGTAGCGGTAGTAA
TTTCAGCCTCGCGGAAGACTCGTCCACGGCGCGGAGTGTGGGTTTCGCGA
CCGCGATCGTGGATTTGGAGGCGGACGGAGGGGGCAAGGACGGGGCCGCC
ATGTCACCAAACGGGGCAAACAAGATGGGTATAGTGATGCAGAGCCAAGG
TAAGGAGGAAGGCGGTACAGGAGTGGTGATGGATACATTTTGATGGGTGA
GCACATGCGCGCTTTCACGCGGTTGGCGTCATTTCTGTATCATCCCTCCC
TCCCTCCCTCCCTCAACCACGGTGCCTTTTCGGGAACTCATCAGCACACC
CTTATCTCCCTCCCTCCTCCCCTTCGTTCCTTCTCTCCTCTCTAGGCGTG
GAGATATGCTTCCATCAGCTGAGTCTAACGGCGCATTACGTGAGCAAGAA
GATGAAGCGCAAGAGCCGCCGGATTCTCAAGGGCATCTCGGTACTGAGGG
AGGGAGCGAGGGAGGGAAGGAGGGAGGGAGAGAGAGAAATCGCTACGGAT
ACGTAGGTGAGCTATTGCGTCGTCGTGCTATTGCCTCCCATTCATTTTCC
ACTGTCGCTCAATTCGTCCCTCCCTCCCCCCATTCCTCCCCCTCTCCCTC
CCTTCCTAGGGCGTGATGAGCAAGGGCACCATGACGGCGGTGATGGGCCC
GTCCGGCTGCGGCAAGTCCTCCCTGCTCCACACTCTGGCCGGGTAGGAGC
ATGGAGGGGGGGAGGAAGGGGGGGAGGGGGGATGCCGGAGGGATGAAATA
CTCCAAACTTTGTGTGTGCTTATCAACGCCCGCCTGACCGCCACTCTCCC
CCGTTCCTCCCTTTGTCCCTCCCTCCCTTCGTCCCTCCCCCCCTCCCTTC
CTCGCCTCACAGTAAGAACAACTTGAGCCACATCTCGGGTCACATCCTGG
TGGATGGCCGTCCGCGAGACGTTGGATTTAACGCCAAGATCGGTTACGTT
GAGCAGGACGACCAGCTCATGGGCATCATGACCGTACGTCCGCCCTCCCT
CTCTTGCCATTCTTCCTTCCCTCCTTCCTTCCCTCCCTCCTATTCTGTTT
GCCTCTCTGTCCTTCTGTCTGTGTCCGGTAGATGCAGAATCTCTCCCTTC
ATTCCTCCCTTTCCCTCCCTCCTTCCCTCCCTCCCTCCCTTCCTCCCCTT
CCAGGTCCGCGAGAATCTCTTCTTCTCTGCCCAGCTCCGCCTGCCGGTCT
CCGTGCCCTTTATAGAGAAGAAGGAGCGAGTGGAGGACACTATCGAGCTT
TTGGGTCTCTGGAAGTGTGCTTCCTCGGCCATAGGCACCGACATGATTCG
GGTTAGTAAGAAGCAAGCCCGCGCTCCCTCCCTCCCTCCCTACATCGCCC
AGGTCCATTGGCGCAACAACCAAATTCAGCAATCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCTCCCCCCAGGGCGTCTCGGGCGGCGAGCGGAAGCGTTGCTCGATC
GGGATGGAGCTGGTTGTGGACCCGGCCGTCATTTTTCTGGATGAGCCCAC
CAGTACGTGCCTTCCATCCCTCCTTCCCTCCCTGCCTTCCCCCTCCCCTC
ACTCCCTCTCCCACGTTCCTTCCTTTCTTTGCCTCTTACCTTCCTTGCTT
CGTTCCTACCCCCTCCCCTCCCCCCCCTGCGTCCAACCCATCGATCCTTC
CCTCCTTTGCTTCTCCCCCTGCCTCTTTCCTCTCCCCGTAACGTCTTTCT
TTCTACGCCATTTTTCCGTTTTTCACGATCCTTCCATCCTTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCAGGCGGCCTCGACGCGT
TCACTGCCCATCGGGTACGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAG
GAAGATGACTTTGTTTTGCATCCTTCCTCCGTTCTCACACCTCCCTCCCT
CCCTCTCTCCTCCAGGTGGTTGAGATTTTGGCCGACCTGGCCATGGCGGG
CAAAACCGTCATCCTCTCCATCCACCAGCCGCGGTACTCCGTCTTCAAGC
TCTTCGACAAACTCATGCTCCTCGCCGAGGGGGAGATGGTCTACCAGGTC
CGTCCTCCCTCCCGCCCTCCCTCCTTCCCGCTCTCGCTTCCTTCGTGATT
ATCTCCCTCCCTTCCTCCCTCCCTCCCTTCTTTCCTCCCGCCCTCCCTCC
CCTCCTCTCCCAGGGCTGTGCCATGCAGGGCGTCGATTACTTCGACAGCA
TCGGCTTCAAGTGCGAAGGTAGGGAGGGAGGGAGGGAGGGAGGTAGGGAG
GGAGGGAGGGAGGGATCCGAGCACAGGAATTAATTTGTTTGATTTGTAGC
ACACACCCACCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCGTTC
CTCCAGCGTTCAACAATCCGTGTGATTTCTTTCTTGACGTCACTTGTGAC
CAGGTAGGTTGGGAGGTAGGGCGAGACGGAGGAATGAGGAGGGAGGGCTA
TAGTTAGGCAAGAGTTAGAGGAGATGGTTACGATTCGATATGTGTTTCCT
CTGTCCTCAGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCCCCTCCCTCTCTCCCTCCCCCCTTTCCCTCAGGTCCGCAAGCTG
GACCGTCAGATCTCGATGGGGGGCTCAGTGCACGTGGAGGAGATGGGCTT
CCTCGCCCGCTCCTTCCACAACAGTCACCAGGGCCGGGCCATCGCGGAGG
AGTGCGAGGCCAAGGCACGTGTCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTTCCTTCCTTTGCTCGAGAGGGATTAAGATACATCGAAAAC
GGGCGCACTAACAAAGGGCACTCTTCCCTCCCTCCCTCCCTTCCTTCCTT
CCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCTGTAGG
TGGTGGCCTCGGGGGGCGATGTTAGGGCCTCGAATCCCATGCCCAAGCAC
GTGCGGCAGTACGCCACGTCCTTCTGCCACCAGACCATGGTGGTAAGGAA
AGGGGAAAGGAGGGAGGGAGGGAGGGAGGGTTGGAGGATGAGGGATTCTC
TCCACCACGTTGGGCCAATCTCACCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCGCCTTCCTTCCTTCCAGGTCAGCAAGCGCACATTCCTCGCGG
TGATGCGCAATCCCGCCACCTCCATCTTCCAAATCCTCTCTTTTCTGGCC
TCGGCCGTCATCCTCGGGGCCTTCTTCTACGGAAATCTCGATGACGGGCC
CAATGCCATGCAGGTACGAAGGTGCACGCTTCCTCCTTCCCTCCCTCCCT
CCCTCCTTTCTTCCCCTGCCTCAGCATTGTCTCCCCTCTTTCCTTGCACC
TCTTGTCTCACAGACTCCCCCCCCCTCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCAGGC
CCACATCGGTGCCATGTTTATGGTTGCCTACATGATCATCTTTTCCGCCA
TCACCTCCCTCGAGCTCTTCATCCAGGTAGGGCGTGAGGGAGGGGAGAGT
GGGATGGGCGATTTAATGGCGCGAGAGAGTAATAAATCAGATTACTGACC
TCTGGTACCCTCCCTCTACTCATTCCTCCTCATCTTCCTTCTTCCTTCCC
TCCCTCAGGAACGGTCTCTCTTTGTCCACGAGAAGACGAGTGGCTTCTAC
CGCACCAGCGCCTACTTTATCGCCAAAGTAGGAAGGCGAACGGCCGGTCC
TTCCTCCCCCTGTCCCTTCCCCCCTCCGTCCCTCCCTCCATCCCTGTCCT
TCCCCAAACTGACCCTTTTCCCCGCCACCCATCCTCCCTCCTCCCCCTCC
CTCCTTGCGCCCGTCGTCAGGTTTTCTGCGAGATCTTGCCGACGCGGTTG
GTGCCCACGATCTTCTACGCCGTCATCACCGCCTATATGGCAGGCCTGCG
CACGGACTTCTACCACCTGTCCATGTACTGGCTCACTCTGACTGGTGAGC
ATCGGGAGGGAGGGAAGGAGGGGTGGTCGTCTCCAAGGCCCATTGTGCTC
GCTGACCTTTCTCCGTTCATGGATGGACAGTCTCACACATTCTCGCTCGT
CGTGTGTTTCTCGATACGCAATGGTGCCCTGGTGCCCGTACCTGGATCGA
TCATCGAGGCGACAATCAGAATAGATGCTGACCATGCCATGCGTGCATCC
TCTCCCTCGTTCTGTCCCTCCGCTTCCCCATTCCTCCAGTCACGAGCATC
ACCTCCACCTCCCTCTGCCTCCTCGTCTCCTGCGCCACCTCCGTCTACTC
TGCCGCCTTCCTCGGGTGTGGCGCCTTTTACCTGCTCTTCATGCTGGCCT
CGGGTTTTGTCCTTCAAGCAGGTGCAGAAGGAGGGAGGAAATGACCTTGA
GGGTCCCAAGATCAATCAGTGGCACCAGGAACTCCTCTTAATCTCTCTTC
GCTATCGCTTTTCCTAATGGCCGTGAATTTAAGTCTTTTAGTGCAAGTCG
AAATGAAGATATTATTGCTATGAAGCACTAACTTCCCTAATCTCCCCTTC
TAATCCATGATAGACAAGATCCCTGTCTACCTGGCCCCCTTCAAGTGGCT
CTCGTTTTACCGCTACTGTTTGCAGAATCTGTTGGCGCTGGACTTGGAGG
GCCGCGTTTTCAACTGCTTTACGCCTGAGGAGATTGCAGCGTCAGGGCAG
GTGAGTCCTTGAGAAGGGAAGGAGGGTGGGATGAGGATGGTCCTACGTGT
AGTTTAGTCCAAGATAGAACTCTAGGGTCGTTTAAGTCGGATGTCACAAA
AACCATTCCACCACATTGGACGCATCCTTTCACCCCTCCCTCATTTCCTA
CCTCTCTCCTTCCCTGTCATTCCCTCCCTCCAGGTGTCCATCTGCCTGCC
CACCGGCGACCTATACCTGAGCTCTCAGGGCATCGACCCTCAGAACGTCT
GGCGAAACATCGGCATTTTGACAGCCATGATCCCTTGCTACCTTGGCATG
GCCTACCTCTTCTTGCGCTCGCTGAAGAAGAAGTCTTAA

Coding sequence (CDS) from alignment at chr21:38464..44402+

>NO21G00140.1 ID=NO21G00140.1|Name=NO21G00140.1|organism=Nannochloropsis oceanica|type=CDS|length=2325bp|location=Sequence derived from alignment at chr21:38464..44402+ (Nannochloropsis oceanica)
ATGGATGTTTTTTTTTTCGCCCAACCGGGACGGAAGAAGAAACTTGATAT
CAGCCGCCGTGCATCGCTTTGTTCGTCGTCGCTTTATAGCCAAAGGGCTG
AAAAACAAGCCATGCTTCCAGCCGATCCCGAGTTGACGGACAAAGCCGGC
TCGAGCCCCTCCATTCAATCGTCCTCGTCAGAGCATGCTGTTTCTGGCCT
CTGGGGTCATCGAGGGGCTCAAGTGTCGTCGAAATCGGACATTACTCTCT
TCTCCACCGCGGACGCCGAGACAAAGGATGCTAAGCACGACTACGCCGAT
GACAACAATGCTGGTAGCGGTAGTAATTTCAGCCTCGCGGAAGACTCGTC
CACGGCGCGGAGTGTGGGTTTCGCGACCGCGATCGTGGATTTGGAGGCGG
ACGGAGGGGGCAAGGACGGGGCCGCCATGTCACCAAACGGGGCAAACAAG
ATGGGTATAGTGATGCAGAGCCAAGGCGTGGAGATATGCTTCCATCAGCT
GAGTCTAACGGCGCATTACGTGAGCAAGAAGATGAAGCGCAAGAGCCGCC
GGATTCTCAAGGGCATCTCGGGCGTGATGAGCAAGGGCACCATGACGGCG
GTGATGGGCCCGTCCGGCTGCGGCAAGTCCTCCCTGCTCCACACTCTGGC
CGGTAAGAACAACTTGAGCCACATCTCGGGTCACATCCTGGTGGATGGCC
GTCCGCGAGACGTTGGATTTAACGCCAAGATCGGTTACGTTGAGCAGGAC
GACCAGCTCATGGGCATCATGACCGTCCGCGAGAATCTCTTCTTCTCTGC
CCAGCTCCGCCTGCCGGTCTCCGTGCCCTTTATAGAGAAGAAGGAGCGAG
TGGAGGACACTATCGAGCTTTTGGGTCTCTGGAAGTGTGCTTCCTCGGCC
ATAGGCACCGACATGATTCGGGGCGTCTCGGGCGGCGAGCGGAAGCGTTG
CTCGATCGGGATGGAGCTGGTTGTGGACCCGGCCGTCATTTTTCTGGATG
AGCCCACCAGCGGCCTCGACGCGTTCACTGCCCATCGGGTGGTTGAGATT
TTGGCCGACCTGGCCATGGCGGGCAAAACCGTCATCCTCTCCATCCACCA
GCCGCGGTACTCCGTCTTCAAGCTCTTCGACAAACTCATGCTCCTCGCCG
AGGGGGAGATGGTCTACCAGGGCTGTGCCATGCAGGGCGTCGATTACTTC
GACAGCATCGGCTTCAAGTGCGAAGCGTTCAACAATCCGTGTGATTTCTT
TCTTGACGTCACTTGTGACCAGGTCCGCAAGCTGGACCGTCAGATCTCGA
TGGGGGGCTCAGTGCACGTGGAGGAGATGGGCTTCCTCGCCCGCTCCTTC
CACAACAGTCACCAGGGCCGGGCCATCGCGGAGGAGTGCGAGGCCAAGGT
GGTGGCCTCGGGGGGCGATGTTAGGGCCTCGAATCCCATGCCCAAGCACG
TGCGGCAGTACGCCACGTCCTTCTGCCACCAGACCATGGTGGTCAGCAAG
CGCACATTCCTCGCGGTGATGCGCAATCCCGCCACCTCCATCTTCCAAAT
CCTCTCTTTTCTGGCCTCGGCCGTCATCCTCGGGGCCTTCTTCTACGGAA
ATCTCGATGACGGGCCCAATGCCATGCAGGCCCACATCGGTGCCATGTTT
ATGGTTGCCTACATGATCATCTTTTCCGCCATCACCTCCCTCGAGCTCTT
CATCCAGGAACGGTCTCTCTTTGTCCACGAGAAGACGAGTGGCTTCTACC
GCACCAGCGCCTACTTTATCGCCAAAGTTTTCTGCGAGATCTTGCCGACG
CGGTTGGTGCCCACGATCTTCTACGCCGTCATCACCGCCTATATGGCAGG
CCTGCGCACGGACTTCTACCACCTGTCCATGTACTGGCTCACTCTGACTG
TCACGAGCATCACCTCCACCTCCCTCTGCCTCCTCGTCTCCTGCGCCACC
TCCGTCTACTCTGCCGCCTTCCTCGGGTGTGGCGCCTTTTACCTGCTCTT
CATGCTGGCCTCGGGTTTTGTCCTTCAAGCAGACAAGATCCCTGTCTACC
TGGCCCCCTTCAAGTGGCTCTCGTTTTACCGCTACTGTTTGCAGAATCTG
TTGGCGCTGGACTTGGAGGGCCGCGTTTTCAACTGCTTTACGCCTGAGGA
GATTGCAGCGTCAGGGCAGGTGTCCATCTGCCTGCCCACCGGCGACCTAT
ACCTGAGCTCTCAGGGCATCGACCCTCAGAACGTCTGGCGAAACATCGGC
ATTTTGACAGCCATGATCCCTTGCTACCTTGGCATGGCCTACCTCTTCTT
GCGCTCGCTGAAGAAGAAGTCTTAA

Synonyms

Publications